View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8210_low_1 (Length: 1323)
Name: NF8210_low_1
Description: NF8210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8210_low_1 |
 | |
|
| [»] scaffold0134 (1 HSPs) |
| | |
|
| [»] scaffold0613 (1 HSPs) |
| | |
|
| [»] scaffold0054 (2 HSPs) |
| | |
|
| [»] scaffold0129 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 1013; Significance: 0; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 1013; E-Value: 0
Query Start/End: Original strand, 207 - 1299
Target Start/End: Original strand, 9581469 - 9582560
Alignment:
| Q |
207 |
tactccaactgcccccacctaacccaacctcagcaaaccatgctaggccgcaaggaagccgcacacaacaagcctgaacgctgcacagaacaacggtggg |
306 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9581469 |
tactccaactgcctccacctaacacaacctcagcaaaccatgctaggccgcaaggaagccacacacaacaagcctgaacgctgcacagaaaaacggtggg |
9581568 |
T |
|
| Q |
307 |
atcgacccaggaaacttccagaccagaaaaacaggcaacagcagaccagaaaacagcaccagatgagccaaaacagaaccacagaatcatcagcgacgat |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9581569 |
atcgacccaggaaacttccagaccagaaaaacaggcaacagcagaccagaaaacagcaccagatgagccaaaacagaaccacagaatcatcagcgacgat |
9581668 |
T |
|
| Q |
407 |
acaaggacaatggcctgctaccgattcaagctatctctggaattcaaattgacaagacactttgtatataaggtaatatcccaatcaccacaatcatttt |
506 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9581669 |
acaaggacaatggcctgctaccgattcaagcgatctctggaattcaaattgacaagacactttgtatataaggtaatatcccaatcaccacaatcatttt |
9581768 |
T |
|
| Q |
507 |
actcctggtaaaaataactaattacttattcctccaattggaagaatgttttccttgtacattactatccgatcaatagaattcacttctttgtaagcaa |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9581769 |
actcctggtaaaaataactaattacttattcctccaattggaagaatgttt-ccttgtacattactatccgatcaatagaattcacttctttgtaagcaa |
9581867 |
T |
|
| Q |
607 |
gctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctc |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
9581868 |
gctccacaatcatttgagtacttaaatcaagacaaactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccaataggacgctc |
9581967 |
T |
|
| Q |
707 |
aatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatga |
806 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9581968 |
aatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcacccaaaattgatatgtgaaaatttgtcgtctcttcatga |
9582067 |
T |
|
| Q |
807 |
tatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatga |
906 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9582068 |
tatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatga |
9582167 |
T |
|
| Q |
907 |
agaattcctcattgctaaagtaaaatgataccaaacatggtccctccagggtatcatcaacttcttcagccaaccaatgacacacaccatccatgtagac |
1006 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9582168 |
agaattcctcattgctcaagtaaaatgataccacacatggtccctccagggtatcatcaacttcttcagccaaccaatgacacacaccatccatgtagac |
9582267 |
T |
|
| Q |
1007 |
ttgagtgccgtcaatacatgccaatgaacaaggcatgctagaaacatcaagtatcctccacgagttagttcttaagctatatatcacccaaattgggtct |
1106 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9582268 |
ttgagtgccgtcaatacgtgccaatgaacaaggcatgctagaaacatcaagtatcctccacgagttagttcttaagctatatatcacccaaattgggtct |
9582367 |
T |
|
| Q |
1107 |
aaagacatacatccatagccagcgtgttcacccgtaatagttacgtggcagatgaccttatagtcatttctaagattgtcgtaaccaaatccatgaagat |
1206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9582368 |
aaagacatacatccatagccagcgtgttcacccgtaatagttacgtgacagatgaccttatagtcatttctaagattgtcgtagccaaatccatgaagat |
9582467 |
T |
|
| Q |
1207 |
aatatgtatcatgtatgctaacaaaatcctcaacatcttcaatagacgactcaactaactcatcctggctgggaacgagcttgattgcgtgtg |
1299 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
9582468 |
aatacgtatcatgtatgctaacaaaatccacaacatcttcaatagacgactcaactaactcatcctgactgggaacgagcttgattgcatgtg |
9582560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 1013; E-Value: 0
Query Start/End: Original strand, 207 - 1299
Target Start/End: Original strand, 9587164 - 9588255
Alignment:
| Q |
207 |
tactccaactgcccccacctaacccaacctcagcaaaccatgctaggccgcaaggaagccgcacacaacaagcctgaacgctgcacagaacaacggtggg |
306 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9587164 |
tactccaactgcctccacctaacacaacctcagcaaaccatgctaggccgcaaggaagccacacacaacaagcctgaacgctgcacagaaaaacggtggg |
9587263 |
T |
|
| Q |
307 |
atcgacccaggaaacttccagaccagaaaaacaggcaacagcagaccagaaaacagcaccagatgagccaaaacagaaccacagaatcatcagcgacgat |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9587264 |
atcgacccaggaaacttccagaccagaaaaacaggcaacagcagaccagaaaacagcaccagatgagccaaaacagaaccacagaatcatcagcgacgat |
9587363 |
T |
|
| Q |
407 |
acaaggacaatggcctgctaccgattcaagctatctctggaattcaaattgacaagacactttgtatataaggtaatatcccaatcaccacaatcatttt |
506 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9587364 |
acaaggacaatggcctgctaccgattcaagcgatctctggaattcaaattgacaagacactttgtatataaggtaatatcccaatcaccacaatcatttt |
9587463 |
T |
|
| Q |
507 |
actcctggtaaaaataactaattacttattcctccaattggaagaatgttttccttgtacattactatccgatcaatagaattcacttctttgtaagcaa |
606 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9587464 |
actcctggtaaaaataactaattacttattcctccaattggaagaatgttt-ccttgtacattactatccgatcaatagaattcacttctttgtaagcaa |
9587562 |
T |
|
| Q |
607 |
gctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctc |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
9587563 |
gctccacaatcatttgagtacttaaatcaagacaaactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccaataggacgctc |
9587662 |
T |
|
| Q |
707 |
aatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatga |
806 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9587663 |
aatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcacccaaaattgatatgtgaaaatttgtcgtctcttcatga |
9587762 |
T |
|
| Q |
807 |
tatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatga |
906 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9587763 |
tatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatga |
9587862 |
T |
|
| Q |
907 |
agaattcctcattgctaaagtaaaatgataccaaacatggtccctccagggtatcatcaacttcttcagccaaccaatgacacacaccatccatgtagac |
1006 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9587863 |
agaattcctcattgctcaagtaaaatgataccacacatggtccctccagggtatcatcaacttcttcagccaaccaatgacacacaccatccatgtagac |
9587962 |
T |
|
| Q |
1007 |
ttgagtgccgtcaatacatgccaatgaacaaggcatgctagaaacatcaagtatcctccacgagttagttcttaagctatatatcacccaaattgggtct |
1106 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9587963 |
ttgagtgccgtcaatacgtgccaatgaacaaggcatgctagaaacatcaagtatcctccacgagttagttcttaagctatatatcacccaaattgggtct |
9588062 |
T |
|
| Q |
1107 |
aaagacatacatccatagccagcgtgttcacccgtaatagttacgtggcagatgaccttatagtcatttctaagattgtcgtaaccaaatccatgaagat |
1206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9588063 |
aaagacatacatccatagccagcgtgttcacccgtaatagttacgtgacagatgaccttatagtcatttctaagattgtcgtagccaaatccatgaagat |
9588162 |
T |
|
| Q |
1207 |
aatatgtatcatgtatgctaacaaaatcctcaacatcttcaatagacgactcaactaactcatcctggctgggaacgagcttgattgcgtgtg |
1299 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
9588163 |
aatacgtatcatgtatgctaacaaaatccacaacatcttcaatagacgactcaactaactcatcctgactgggaacgagcttgattgcatgtg |
9588255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 559; E-Value: 0
Query Start/End: Original strand, 376 - 1300
Target Start/End: Original strand, 9593420 - 9594354
Alignment:
| Q |
376 |
aaaacagaaccacagaatcatcagcgacgatacaaggacaatggcctgctaccgattcaagctatctctgg-aattcaaattgacaagacactttgtata |
474 |
Q |
| |
|
|||||| ||||||| || ||| ||| || ||||||||| |||| || ||||||||||||||| ||||| || ||||| |||||||||||||||||| ||| |
|
|
| T |
9593420 |
aaaacaaaaccacataagcatgagcaacaatacaaggataatgacccgctaccgattcaagcaatctcagggaattccaattgacaagacactttgcata |
9593519 |
T |
|
| Q |
475 |
taaggtaatatcccaatcaccacaatcattttactcctggtaaaaa---------taactaattacttattcctccaattggaagaatgttttccttgta |
565 |
Q |
| |
|
|||||||||| ||||||||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9593520 |
caaggtaatattccaatcaccacgatcattttgctcctggtgaaaacaaggaaaataactaattacttattcctccaattggaagaatgttttccttgta |
9593619 |
T |
|
| Q |
566 |
cattactatccgatcaatagaattcacttctttgtaagcaagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatg |
665 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||| ||||||||| ||||||| |||||||| ||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
9593620 |
tattaatatccgatcaatagaattcacttttttgcaagcaagcttcacaatcgtttgagtatttaaatcaagacaaactagttctttatcttctctgatg |
9593719 |
T |
|
| Q |
666 |
acgaatatttctcctttcgttcccactccgataggacgctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtatt |
765 |
Q |
| |
|
| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| || ||||||| |||||||| || |||||||||||||||| |
|
|
| T |
9593720 |
aagaatatttctcctttcgtacccactccgatgggacgctcaatgaaagacaacggtccgacaatgaagaaattggtccacgattcctttataccgtatt |
9593819 |
T |
|
| Q |
766 |
caccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaag |
865 |
Q |
| |
|
|||| ||||| ||||| |||||||| || ||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||||| |
|
|
| T |
9593820 |
cacccaaaattgatatctgaaaattagttgtctctttatgatatgagatcaatgcaaaggacccatttaacaccaccaagtttatccacaatgcgtgaag |
9593919 |
T |
|
| Q |
866 |
attgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcctcattgctaaagtaaaatgataccaaacatggtccctccagggtatcatca |
965 |
Q |
| |
|
|| |||||||||||| ||||||||||| ||| |||||||||||| |||||||||| |||||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
9593920 |
atcgaaacaatcatccaagtatgagggaatgggtgttatgaagaacacctcattgctcaagtaaaaggataccaaacatggtccctccaaggtatcatca |
9594019 |
T |
|
| Q |
966 |
acttcttcagccaaccaatgacacacaccatccatgtagacttgagtgccgtcaatacatgccaatgaacaaggcatgctagaaacatcaagtatcctcc |
1065 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||||||| |
|
|
| T |
9594020 |
acttcttcagccaaccaatgacacacaccatccatgtagacttgagtgccgtcaatacgtgccaatgaacaaggcatgccaaaaacattaagtatcctcc |
9594119 |
T |
|
| Q |
1066 |
acgagttagttcttaagctatatatcacccaaattgggtctaaagacatacatccatagccagcgtgttcacccgtaatagttacgtggcagatgacctt |
1165 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||||||||| || |||||||| |
|
|
| T |
9594120 |
acgagttagttcttaagctatatatcacccaaattgggtctaaagacatatctccatagccatcatgttcacccctaatagttacgtaacatatgacctt |
9594219 |
T |
|
| Q |
1166 |
atagtcatttctaagattgtcgtaaccaaatccatgaagataatatgtatcatgtatgctaacaaaatcctcaacatcttcaatagacgactcaactaac |
1265 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||| | |||| |||||||||||||| |
|
|
| T |
9594220 |
agagtcatttctaagattgtcgtaaccaaatccatgaagataatatctatcatttatgctaacaaaatgctcaacatttggaataaacgactcaactaac |
9594319 |
T |
|
| Q |
1266 |
tcatcctggctgggaacgagcttgattgcgtgtgt |
1300 |
Q |
| |
|
||| | | |||||||||||||||| ||||||| |
|
|
| T |
9594320 |
acatacggagtgggaacgagcttgatcacgtgtgt |
9594354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 518 - 1269
Target Start/End: Complemental strand, 9569473 - 9568719
Alignment:
| Q |
518 |
aaataactaattacttattcctccaattggaagaatgttttccttgtacattactatccgatcaatagaattcacttctttgtaagcaagctccacaatc |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9569473 |
aaataactaattacttattcctccaattggaagaatattttccttgtatattactatcctatcaatagaattcacttctttgtaaacaagctccacaatc |
9569374 |
T |
|
| Q |
618 |
atttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctcaatgcaagaca |
717 |
Q |
| |
|
||||||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
9569373 |
atttgagtacttaaatcaatacaaactagctctttatcttttctgatgacgaatatttctccttttgtccccactccgataggacgctcaatgcaagaca |
9569274 |
T |
|
| Q |
718 |
acggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaa |
817 |
Q |
| |
|
|||||||||| | ||||||||||||||| || ||||| || || |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9569273 |
acggtccaacaaggaagagtttggtccacgattccttaatgccatattcacccaaaatcgatatgtgaaaattagtcgtctcttcatgatatgagatcaa |
9569174 |
T |
|
| Q |
818 |
tgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcctca |
917 |
Q |
| |
|
||||||| ||| ||||||||| |||||||||||||||| | |||| || |||||||||||| ||||||||||| | | |||||||||||||| |||| |
|
|
| T |
9569173 |
cgcaatggccccgtttaacaccaccaagtttatccacaatgcttgaacatcgaaacaatcatccaagtatgagggaacgggtgttatgaagaatttctca |
9569074 |
T |
|
| Q |
918 |
ttgctaaagtaaaatgataccaaacatggtccctccagggtatcatcaacttcttcagccaaccaatgacacacaccatccatgtagacttgagtgccgt |
1017 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||| | |||| || |||||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
9569073 |
ttgctcaagtaaaatgataccaaacatggtccatcctgactatcttcttcttcttcacacaaccaatgacacacaccattcatgtagacttgagtgccgt |
9568974 |
T |
|
| Q |
1018 |
caatacatgccaatgaacaaggcatgctagaaacatcaagtatcctccacgagttagttcttaagctatatatcacccaaattgggtctaaagacataca |
1117 |
Q |
| |
|
||||||||||||| ||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||| |||| |
|
|
| T |
9568973 |
caatacatgccaaagaataaggcatgtcaaaaacatcaagtatcctccacgagttagttcttaagctatatatcttccagaacgggtctaaagtcatatc |
9568874 |
T |
|
| Q |
1118 |
tccatagccagcgtgttcacccgtaatagttacgtggcagatgaccttatagtcatttctaagattgtcgtaaccaaatccatgaagataatatgtatca |
1217 |
Q |
| |
|
|| || |||||||| |||||| |||||| ||| | || ||||| ||||||||||||||||| | |||||||||||||||||||||||| |||||||| |
|
|
| T |
9568873 |
accgtaaccagcgtgctcacccataatagatacataacaaatgacattatagtcatttctaagttcatcgtaaccaaatccatgaagataagatgtatca |
9568774 |
T |
|
| Q |
1218 |
tgtatgctaacaaaatcctcaacatct---tcaatagacgactcaactaactcat |
1269 |
Q |
| |
|
| ||| ||| ||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
9568773 |
tctatactatcaaaatcttcaacatcttcgtcaatagacgactcaactaactcat |
9568719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 358 - 1292
Target Start/End: Original strand, 9602197 - 9603149
Alignment:
| Q |
358 |
aacagcaccagatgagccaaaa-cagaaccacagaatcatcagcgacgatacaaggacaatggcctgctaccgattcaagctatctctggaattcaaatt |
456 |
Q |
| |
|
|||||||||||||||||||||| || ||||| | | |||||||||||||||||||| ||||||| |||||||||| ||| ||||| || ||| |||| |
|
|
| T |
9602197 |
aacagcaccagatgagccaaaaacaaaaccatatatgcatcagcgacgatacaaggataatggcccgctaccgatttaagaaatctccggggttccaatt |
9602296 |
T |
|
| Q |
457 |
gacaagacactttgtatataaggtaatatcccaatcaccacaatcattttac-------tcctggt---------aaaaataactaattacttattcctc |
540 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||| |
|
|
| T |
9602297 |
gacaagacactttgcatacaaggtaatatcccaatcactgcaatcattttgcattttgctcctggtgaaaacaagaaaaataactaattacttattcctc |
9602396 |
T |
|
| Q |
541 |
caattggaagaatgttttccttgtacattactatccgat-------caatagaattcacttctttgtaagcaagctccacaatcatttgagtacttaaat |
633 |
Q |
| |
|
| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||||| ||||||||||| | |||||||||||||| |
|
|
| T |
9602397 |
cgattggaagaatgttttccttgtatattagtattcgatcgacgatcaatagaattcacttctttgtaagaaagctccacaaccgattgagtacttaaat |
9602496 |
T |
|
| Q |
634 |
caagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctcaatgcaagacaacggtccaaccatgaa |
733 |
Q |
| |
|
||||||| |||| ||||||||||| ||||||||| ||||||||||||||| | || || |||||||||||||||||||||||||||| |||||| | || |
|
|
| T |
9602497 |
caagacaaactacttctttatcttctctgatgacaaatatttctcctttcatcccaaccccgataggacgctcaatgcaagacaacgatccaacattaaa |
9602596 |
T |
|
| Q |
734 |
gagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccattt |
833 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||| ||||||||||||||||| || |||||||||| |
|
|
| T |
9602597 |
gagtttggtccacgactcctttataccgtattcacccaaaattgatatttgaaaattattcgtctctttatgatatgagatcaatgaaacggacccattt |
9602696 |
T |
|
| Q |
834 |
aacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcctcattgctaaagtaaaatg |
933 |
Q |
| |
|
|||||| |||||||||||||||| | |||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| |||||||||| |
|
|
| T |
9602697 |
aacaccaccaagtttatccacaatg------ctttgaaacaatcatctaagtacgagggtatgggtgttatgaagaatacctcattgctcaagtaaaatg |
9602790 |
T |
|
| Q |
934 |
ataccaaacatggtccctccagggtatcatcaacttcttcagccaaccaatgacacacaccatccatgtagacttgagtgccgtcaatacatgccaatga |
1033 |
Q |
| |
|
||||||| ||| ||| || | |||| ||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |
|
|
| T |
9602791 |
ataccaaccatcttccatcttgactatcttcatcttcttcccacaaccaatgacacacaccatccatgtagacttgactgccgtcaataagtgccaagga |
9602890 |
T |
|
| Q |
1034 |
acaaggcatgctagaaacatcaagtatcc---tccacgagttagttcttaagctatatatcacccaaattgggtctaaagacatacatccatagccagcg |
1130 |
Q |
| |
|
| |||||||| | ||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
9602891 |
ataaggcatgtcaaaaa---taagtatccttttccacgagttagttcttaagctatatttcacccaaattgggtctaaagacatatgtccatagctagcg |
9602987 |
T |
|
| Q |
1131 |
tgttcacccgtaatagttacgtggcagatgaccttatagtcatttctaagattgtcgtaaccaaatccatgaagataatatgtatcatgtatgctaacaa |
1230 |
Q |
| |
|
|||| |||||||||||||| || || ||||| ||||| ||||||||||| | ||||||||||||||||||||||||| | |||| | ||||||||||| |
|
|
| T |
9602988 |
tgttgacccgtaatagttatgtaacatatgacattataatcatttctaaggtcgtcgtaaccaaatccatgaagataagacgtatgaattatgctaacaa |
9603087 |
T |
|
| Q |
1231 |
aatcctcaacatcttcaatagacgactcaactaactcatcctggctgggaacgagcttgatt |
1292 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
9603088 |
aatccttaacatcttcaacagacgactcaactaacttatccgtagtgggaacgagcttgatt |
9603149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 647 - 1242
Target Start/End: Original strand, 54295006 - 54295604
Alignment:
| Q |
647 |
ttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctcaatgcaagacaacggtccaaccatgaagagtttggtccat |
746 |
Q |
| |
|
||||||||||| ||| | || ||||||||| || ||||| ||||||||||||||| |||||| |||||||||||||||| ||||| ||||||||||| |
|
|
| T |
54295006 |
ttctttatcttttcttacgaagaatatttcccccttcgtccccactccgataggatgctcaacataagacaacggtccaacaatgaaaagtttggtccac |
54295105 |
T |
|
| Q |
747 |
gactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccatttaacaccgccaagt |
846 |
Q |
| |
|
|| || | | |||| ||||||| ||||| |||||||||||||| || | |||||||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
54295106 |
gattctatcacaccgaattcacccaaaattgatatgtgaaaattagtggactcttcatgatatgagatcaatgcaatgcacccatttagtaccgccaagg |
54295205 |
T |
|
| Q |
847 |
ttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcctcattgctaaagtaaaatgataccaaacatgg |
946 |
Q |
| |
|
|||||||||| | |||| || |||||||||||||||| ||||| |||| ||||||||| || ||||||||| ||||||||||||||||||||||| |
|
|
| T |
54295206 |
ttatccacaatgcttgaacatcaaaacaatcatctaagtttgaggatatgggtgttatgaaaaacatctcattgctcaagtaaaatgataccaaacatgg |
54295305 |
T |
|
| Q |
947 |
tccctccagggtatcatcaacttcttcagccaaccaatgacacacaccatccatgtagacttgagtgccgtcaataca------tgccaatgaacaaggc |
1040 |
Q |
| |
|
||| | ||| |||| ||| ||||| |||||||||||||||||||||||||||||||| | ||| ||| || | || ||| ||| ||||| |
|
|
| T |
54295306 |
tccatgcagattatcttcatgcacttcacacaaccaatgacacacaccatccatgtagactttggagccctcactatatgggattgacaaagaataaggc |
54295405 |
T |
|
| Q |
1041 |
atgctagaaacatcaagtatcctccacgagttagttcttaagctatatatcacccaaattgggtctaaagacatacatccatagccagcgtgttcacccg |
1140 |
Q |
| |
|
||| |||||||||||||||||| |||||||||||||||||||||||| |||| | | ||||||||||||| ||| | | |||||| |||| | |
|
|
| T |
54295406 |
atg---tcaacatcaagtatcctccatgagttagttcttaagctatatatctcccagaaggagtctaaagacataactccgtggtcagcgtattcaacat |
54295502 |
T |
|
| Q |
1141 |
taatagttacgtggcagatgaccttatagtcatttctaagattgtcgtaaccaaatccatgaagataatatgtatcatgtatgctaacaaaatcctcaac |
1240 |
Q |
| |
|
|||| ||| | || |||| ||||||||||||| |||| | ||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
54295503 |
caatacatacataacaaatgagcttatagtcatttataagttcgtcgtaaccaaatccatgattataatatgtatctattatcctaacaaaatcctcaac |
54295602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 167; E-Value: 8e-89
Query Start/End: Original strand, 846 - 1208
Target Start/End: Complemental strand, 9574276 - 9573914
Alignment:
| Q |
846 |
tttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcctcattgctaaagtaaaatgataccaaacatg |
945 |
Q |
| |
|
||||||||||| | |||| || ||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9574276 |
tttatccacaatgcttgaacatcgaaactatcatctaagtatgagggtatgggtgttatgaagaattcctcattgctcaagtaaaatgataccaaacatg |
9574177 |
T |
|
| Q |
946 |
gtccctccagggtatcatcaacttcttcagccaaccaatgacacacaccatccatgtagacttgagtgccgtcaatacatgccaatgaacaaggcatgct |
1045 |
Q |
| |
|
|| || | |||| ||| |||||||| | | ||||||||||||||||||||| | ||||||||||||||||||| |||||| ||| |||||||| |
|
|
| T |
9574176 |
ctcgatcttgactatcttcaccttcttcacactatcaatgacacacaccatccatgcaaacttgagtgccgtcaatacctgccaacgaataaggcatgtc |
9574077 |
T |
|
| Q |
1046 |
agaaacatcaagtatcctccacgagttagttcttaagctatatatcacccaaattgggtctaaagacatacatccatagccagcgtgttcacccgtaata |
1145 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||| ||| |||| |||| |||||||| | ||| |
|
|
| T |
9574076 |
aaaaacatcaagtatcctccacgagttagttcttaagctatatatctcccagaatgggtctaaagacatatttccgtagctagcgcgttcacccttgata |
9573977 |
T |
|
| Q |
1146 |
gttacgtggcagatgaccttatagtcatttctaagattgtcgtaaccaaatccatgaagataa |
1208 |
Q |
| |
|
| ||| | || | ||| | ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9573976 |
gatacataacaaaagacataatagtcatttctaagattgtcataaccaaatccatgaagataa |
9573914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 328 - 512
Target Start/End: Complemental strand, 9569828 - 9569646
Alignment:
| Q |
328 |
accagaaaaacaggcaacagcagaccagaaaa-cagcaccagatgagccaaaacagaaccacagaatcatcagcgacgatacaaggacaatggcctgcta |
426 |
Q |
| |
|
|||||||| |||| |||||||||||||||||| ||| | ||| |||||||||||||||||| || |||||||||||||||||||| ||||||| |||| |
|
|
| T |
9569828 |
accagaaagacag-caacagcagaccagaaaaacagacctggattagccaaaacagaaccacataagcatcagcgacgatacaaggataatggcccgcta |
9569730 |
T |
|
| Q |
427 |
ccgattcaagctatctctggaattcaaattgacaagacactttgtatataaggtaatatcccaatcaccacaatcattttactcct |
512 |
Q |
| |
|
|||||| |||| ||||| | |||| | |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
9569729 |
ccgattaaagcaatctccaggattc--ctagacaagacactttgcatacaaggtaatatcccaatcaccacaatcattttgctcct |
9569646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 730 - 856
Target Start/End: Complemental strand, 37898014 - 37897888
Alignment:
| Q |
730 |
tgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggaccc |
829 |
Q |
| |
|
|||||||||||||||| || ||||| ||||| ||| || |||| |||| ||||||| | |||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
37898014 |
tgaagagtttggtccacgattccttcataccaagttcgcccaaaactgatacgtgaaaagtagtcgtctcttcatgatatgagaacaatgcaatggactc |
37897915 |
T |
|
| Q |
830 |
atttaacaccgccaagtttatccacaa |
856 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
37897914 |
atataacaccgccaagtttatccacaa |
37897888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 279 - 465
Target Start/End: Original strand, 9605997 - 9606190
Alignment:
| Q |
279 |
cctgaacgctgcacagaacaacggtgggatcgacccaggaaacttccaga----cca--gaaaaacaggcaacagcagaccagaaaa-cagcaccagatg |
371 |
Q |
| |
|
|||||| ||||||||||| ||| ||||||| |||||| |||||||||||| ||| | |||||| |||| |||||||||||| ||||| |||||| |
|
|
| T |
9605997 |
cctgaaggctgcacagaaaaacagtgggattgacccaagaaacttccagaacccccaccgccaaacag-caaccacagaccagaaaagcagcaacagatg |
9606095 |
T |
|
| Q |
372 |
agccaaaa-cagaaccacagaatcatcagcgacgatacaaggacaatggcctgctaccgattcaagctatctctggaattcaaattgacaagaca |
465 |
Q |
| |
|
|||||||| ||||| ||| || ||||||| |||||||||||| |||||| ||||||||||||||| ||||| | |||| ||||||||||||| |
|
|
| T |
9606096 |
agccaaaaacagaaggacataagcatcagcaacgatacaaggataatggctcgctaccgattcaagcaatctccgagattctaattgacaagaca |
9606190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 870 - 949
Target Start/End: Complemental strand, 37895910 - 37895831
Alignment:
| Q |
870 |
aaacaatcatctaagtatgagggtatgtatgttatgaagaattcctcattgctaaagtaaaatgataccaaacatggtcc |
949 |
Q |
| |
|
||||| |||||||||| |||||||||| ||||| |||||| |||||||||| | |||||||||||||||||||||||| |
|
|
| T |
37895910 |
aaacagtcatctaagtctgagggtatgggtgttacgaagaacacctcattgctcaggtaaaatgataccaaacatggtcc |
37895831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 328
Target Start/End: Complemental strand, 9569933 - 9569856
Alignment:
| Q |
251 |
aggccgcaaggaagccgcacacaacaagcctgaacgctgcacagaacaacggtgggatcgacccaggaaacttccaga |
328 |
Q |
| |
|
||||| ||||||||||||| | |||||||||| | ||||| ||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
9569933 |
aggccacaaggaagccgcaaaaaacaagcctggaggctgcccagaaaaacggtgggatcgaccgaagaaacttccaga |
9569856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 9593296 - 9593384
Alignment:
| Q |
240 |
caaaccatgctaggccgcaaggaagccgcacacaacaagcctgaacgctgcacagaacaacggtgggatcgacccaggaaacttccaga |
328 |
Q |
| |
|
|||||| || |||||| | ||||||||||||| |||||||||||| |||||||| || ||||||||||| ||| || || ||||||||| |
|
|
| T |
9593296 |
caaaccttgataggccacgaggaagccgcacaaaacaagcctgaaagctgcacataaaaacggtgggatagactcaagacacttccaga |
9593384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 663 - 710
Target Start/End: Complemental strand, 9571927 - 9571880
Alignment:
| Q |
663 |
atgacgaatatttctcctttcgttcccactccgataggacgctcaatg |
710 |
Q |
| |
|
|||| |||||||||||||||||| ||||||| ||||||| |||||||| |
|
|
| T |
9571927 |
atgaagaatatttctcctttcgtccccactctgataggatgctcaatg |
9571880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 171; Significance: 3e-91; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 595 - 1024
Target Start/End: Complemental strand, 29013036 - 29012613
Alignment:
| Q |
595 |
ctttgtaagcaagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactcc |
694 |
Q |
| |
|
|||| ||| ||| |||| |||||||||| ||||| |||||||| || |||||||||| ||||| |||||||| |||||||||||||||||| |||||||| |
|
|
| T |
29013036 |
ctttataaccaacctcctcaatcatttgggtactcaaatcaagccaaactagttcttcatcttttctgatgaagaatatttctcctttcgtccccactcc |
29012937 |
T |
|
| Q |
695 |
gataggacgctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtc |
794 |
Q |
| |
|
||||||||||| || |||||||||||||||||| |||||||||||||||||||| ||||| | |||| | || || ||||| |||||||||||||| ||| |
|
|
| T |
29012936 |
gataggacgcttaacgcaagacaacggtccaacaatgaagagtttggtccatgattccttcacaccgaaatcccccaaaattgatatgtgaaaattagtc |
29012837 |
T |
|
| Q |
795 |
gtctcttcatgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggta |
894 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| | | || | ||||| |||| | ||| |||| |
|
|
| T |
29012836 |
gtctctttatgatatgagaccaatgcaatggacccatttaataccgccaagtttaaccacaatgctaaatcatcagaccaatcctctacttctgacggta |
29012737 |
T |
|
| Q |
895 |
tgtatgttatgaagaattcctcattgctaaagtaaaatgataccaaacatggtccctccagggtatcatcaacttcttcagccaaccaatgacacacacc |
994 |
Q |
| |
|
| |||| ||||||| ||||||||||||||||||||||||||||||||| | |||| | ||| ||||||||| ||||||||||||||| || |
|
|
| T |
29012736 |
agggtgttgtgaagaacccctcattgctaaagtaaaatgataccaaacatgattcctcattgctat------cttcttcagacaaccaatgacacactcc |
29012643 |
T |
|
| Q |
995 |
atccatgtagacttgagtgccgtcaataca |
1024 |
Q |
| |
|
||||||||||||||| |||||||||||||| |
|
|
| T |
29012642 |
atccatgtagacttgggtgccgtcaataca |
29012613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 136; E-Value: 3e-70
Query Start/End: Original strand, 522 - 949
Target Start/End: Complemental strand, 29131585 - 29131158
Alignment:
| Q |
522 |
aactaattacttattcctccaattggaagaatgttttccttgtacattactatccgatcaatagaattcacttctttgtaagcaagctccacaatcattt |
621 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||| |||||||| |||| ||||||| | || | |||| |||||||| ||||| || |||| ||| |
|
|
| T |
29131585 |
aactacttacttgttcctccaattggaagaatgttatccttgtatattattatccgactagtatgacccactcctttgtaaccaagccccgcaattcttt |
29131486 |
T |
|
| Q |
622 |
gagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctcaatgcaagacaacgg |
721 |
Q |
| |
|
| |||||||||||||| || |||||||||| ||||| ||| | || ||||||||||||||| || |||||||| ||||||||||||| || |||||| || |
|
|
| T |
29131485 |
gcgtacttaaatcaagccaaactagttcttcatcttttcttaggaagaatatttctccttttgtccccactccaataggacgctcaacgccagacaatgg |
29131386 |
T |
|
| Q |
722 |
tccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgca |
821 |
Q |
| |
|
|||||| ||||||| |||||||| || || ||||| || ||||||| ||||| |||||||||||| | || || ||||||||||||| ||||||||| |
|
|
| T |
29131385 |
tccaacaatgaagatcttggtccacgattcttttatgccaaattcacccaaaattgatatgtgaaaagtagttgtgccttcatgatatgacatcaatgca |
29131286 |
T |
|
| Q |
822 |
atggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcctcattgc |
921 |
Q |
| |
|
|||||| |||| ||||| |||||||||||||| | || || ||||||||||||| || |||||||||| |||| ||| ||| | ||||||| |
|
|
| T |
29131285 |
atggacacattcaacactgccaagtttatccaattttctttaacatcaaaacaatcatctacgtctgagggtatgggtgttgtgacgaacacttcattgc |
29131186 |
T |
|
| Q |
922 |
taaagtaaaatgataccaaacatggtcc |
949 |
Q |
| |
|
| |||||||||||||||||||||||||| |
|
|
| T |
29131185 |
tcaagtaaaatgataccaaacatggtcc |
29131158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 668 - 949
Target Start/End: Complemental strand, 29145427 - 29145146
Alignment:
| Q |
668 |
gaatatttctcctttcgttcccactccgataggacgctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattca |
767 |
Q |
| |
|
||||||||| ||||| | || |||||||||||| ||| ||||||||| | ||||||| || ||||||||||||||||| ||||| ||||| || || |
|
|
| T |
29145427 |
gaatatttccccttttatcccaactccgataggatgcttaatgcaagatagtggtccaagaataaagagtttggtccatgattccttcatacctaatcca |
29145328 |
T |
|
| Q |
768 |
ccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagat |
867 |
Q |
| |
|
|| ||||| |||||||||||||| || || | ||||||||||||||||||||||||| | |||||| ||| |||| |||||||||||| | | || || |
|
|
| T |
29145327 |
cccaaaattgatatgtgaaaattagtagtttgttcatgatatgagatcaatgcaatgaaatcatttatcactgccaggtttatccacaatgcttcaacat |
29145228 |
T |
|
| Q |
868 |
tgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcctcattgctaaagtaaaatgataccaaacatggtcc |
949 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||| ||||| ||||| | || ||||||||||| |||||||||||||| |
|
|
| T |
29145227 |
cgaaacaatcatctaagtctgagggtatgggtgttactaagaacacctcactactcaagtaaaatgacaccaaacatggtcc |
29145146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 604 - 949
Target Start/End: Original strand, 29152012 - 29152357
Alignment:
| Q |
604 |
caagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacg |
703 |
Q |
| |
|
|||||||| |||||||||||||||| | ||||| || ||| ||||||||||| ||| || | ||||||||| || || | ||||||||||||||||| |
|
|
| T |
29152012 |
caagctcctcaatcatttgagtactcagatcaaaccaagctacttctttatcttttcttataaagaatatttccccatttttccccactccgataggacg |
29152111 |
T |
|
| Q |
704 |
ctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttca |
803 |
Q |
| |
|
||||| | ||| ||||||||||||||||||||||||| |||| || || | | |||| || ||| ||||| |||| ||||| | |||||||||||| |
|
|
| T |
29152112 |
ctcaacgtaaggcaacggtccaaccatgaagagtttgatccacgattctctgaaaccgagttgacccaaaattgatacacgaaaagtagtcgtctcttca |
29152211 |
T |
|
| Q |
804 |
tgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgtta |
903 |
Q |
| |
|
| ||||||||||||||| ||||||||||||||||| |||||||||||||| | | || || ||||| ||||||| || || | ||||| |||| |
|
|
| T |
29152212 |
ttatatgagatcaatgctatggacccatttaacacacccaagtttatccactttgctttaacatcaaaacagtcatctacgtctgggagtatgggtgttg |
29152311 |
T |
|
| Q |
904 |
tgaagaattcctcattgctaaagtaaaatgataccaaacatggtcc |
949 |
Q |
| |
|
||| | | | |||||||| |||||||||||||||||||||||||| |
|
|
| T |
29152312 |
tgagggacacttcattgctcaagtaaaatgataccaaacatggtcc |
29152357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 599 - 835
Target Start/End: Original strand, 32740592 - 32740828
Alignment:
| Q |
599 |
gtaagcaagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgata |
698 |
Q |
| |
|
|||| |||||||| ||||| |||| |||| ||||||||| || |||||||||| ||||| ||| | || |||||||||||||||||| |||||||| ||| |
|
|
| T |
32740592 |
gtaaccaagctccgcaatcctttgtgtacataaatcaagccaaactagttcttcatcttttcttaggaagaatatttctcctttcgtccccactccaata |
32740691 |
T |
|
| Q |
699 |
ggacgctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtct |
798 |
Q |
| |
|
||||| | || | |||||| |||||||| ||||||||||||||||| || |||||||| ||| ||||||| ||||| |||| | ||||| | || || | |
|
|
| T |
32740692 |
ggacgttgaacaccagacaatggtccaacaatgaagagtttggtccacgattcctttatgccgaattcacccaaaattgatacgagaaaagtagttgtgt |
32740791 |
T |
|
| Q |
799 |
cttcatgatatgagatcaatgcaatggacccatttaa |
835 |
Q |
| |
|
||||||||| ||||||||| |||||| ||||| |||| |
|
|
| T |
32740792 |
cttcatgatgtgagatcaaggcaatgaacccacttaa |
32740828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 604 - 942
Target Start/End: Original strand, 32744743 - 32745081
Alignment:
| Q |
604 |
caagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacg |
703 |
Q |
| |
|
|||||||| |||||||||| ||||| ||||||| || | ||||||| ||| | ||| |||| ||||||||| || || || |||||||| ||||| || |
|
|
| T |
32744743 |
caagctcctcaatcatttgggtactcaaatcaaaccaagccagttcttcatcgtttcttatgaagaatatttccccctttgtacccactccaataggccg |
32744842 |
T |
|
| Q |
704 |
ctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttca |
803 |
Q |
| |
|
|||| ||||| ||| ||||||| ||||||| ||||||||||| || || ||||| ||||| | ||| |||||||||||| | ||||||| |||| |
|
|
| T |
32744843 |
atcaacgcaaggcaatggtccaatagtgaagagattggtccatgattctttcataccaatctcacccataattgatatgtgaaaagtagtcgtcttttca |
32744942 |
T |
|
| Q |
804 |
tgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgtta |
903 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| | || || ||| ||||||||| | |||||||| | ||||| |
|
|
| T |
32744943 |
taatatgagatcaatgcaatggacccatttaacaccgccaagtttctccaattggtttcaacatcaaaagaatcatctacatctgagggtacgggtgtta |
32745042 |
T |
|
| Q |
904 |
tgaagaattcctcattgctaaagtaaaatgataccaaac |
942 |
Q |
| |
|
||||||| | || ||||| |||||||| |||||||||| |
|
|
| T |
32745043 |
tgaagaacccttctttgctcaagtaaaacgataccaaac |
32745081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 85; E-Value: 7e-40
Query Start/End: Original strand, 613 - 949
Target Start/End: Complemental strand, 34282104 - 34281768
Alignment:
| Q |
613 |
caatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctcaatgca |
712 |
Q |
| |
|
|||||||||| ||||| ||||||| || | | ||||||||||| ||| |||| ||||||||| || || || |||||||||||||||||||||| | | |
|
|
| T |
34282104 |
caatcatttgggtactcaaatcaaaccaagccacttctttatcttttcttatgaagaatatttccccctttgtccccactccgataggacgctcaacgta |
34282005 |
T |
|
| Q |
713 |
agacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgag |
812 |
Q |
| |
|
|| ||||||||||||||| ||||||||| |||| || || || | |||| || ||| ||||| |||| ||||| | | ||||||| | |||||||| |
|
|
| T |
34282004 |
aggcaacggtccaaccataaagagtttgatccacgattctttgaaaccgagttgacccaaaattgatacacgaaaagtacttgtctctttacgatatgag |
34281905 |
T |
|
| Q |
813 |
atcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaatt |
912 |
Q |
| |
|
|||||||| ||| |||||||||||||| |||||||| ||||| | | || || ||||||||||||| || || ||||||| |||| ||||| | |
|
|
| T |
34281904 |
atcaatgctatgtacccatttaacaccaccaagtttttccactttgctttaacatcaaaacaatcatctacgtctgggggtatggctgttgtgaaggaca |
34281805 |
T |
|
| Q |
913 |
cctcattgctaaagtaaaatgataccaaacatggtcc |
949 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
34281804 |
cttcattgctcaagtaaaatgataccaaacatggtcc |
34281768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 604 - 854
Target Start/End: Original strand, 34278330 - 34278580
Alignment:
| Q |
604 |
caagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacg |
703 |
Q |
| |
|
|||||||| ||||||| || |||| ||||||| || ||| ||||||||||| | | |||| |||||||| || || || ||||||||||||||||| |
|
|
| T |
34278330 |
caagctcctcaatcatatggatactcaaatcaaaccaagctacttctttatcttttattatgaagaatattttcccctttgtccccactccgataggacg |
34278429 |
T |
|
| Q |
704 |
ctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttca |
803 |
Q |
| |
|
||||| | ||| ||||||||||||||||||||||||| |||| || || || | |||| || ||| |||||||||| ||||| | ||| |||||| | |
|
|
| T |
34278430 |
ctcaacgtaaggcaacggtccaaccatgaagagtttgatccaagattctttgaaaccgagttgacccaaaatcgatacacgaaaagtagtcatctcttta |
34278529 |
T |
|
| Q |
804 |
tgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccac |
854 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
34278530 |
tgatatgtgatcaatgctatggacccatttaacaccaccaagtttatccac |
34278580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 604 - 853
Target Start/End: Complemental strand, 29124343 - 29124094
Alignment:
| Q |
604 |
caagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacg |
703 |
Q |
| |
|
|||||||| |||||||||| ||||| ||||||| || ||||||||||||||| ||| |||| ||||||||| || ||| | |||||||| |||||||| |
|
|
| T |
29124343 |
caagctcctcaatcatttgggtactcaaatcaaaccaagctagttctttatcttttctaatgaagaatatttcccccttcatacccactccaataggacg |
29124244 |
T |
|
| Q |
704 |
ctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttca |
803 |
Q |
| |
|
|||| |||| ||| ||||| | ||||||| ||||||||||| ||||| |||||| ||||| | ||| ||||| |||||| | ||| ||| |||| |
|
|
| T |
29124243 |
atcaacacaaggcaatggtcccatagtgaagagcttggtccatgattccttcataccgatctcacccagaattgatatctgaaaagtagtcttcttttca |
29124144 |
T |
|
| Q |
804 |
tgatatgagatcaatgcaatggacccatttaacaccgccaagtttatcca |
853 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||| ||||||||| |||| |
|
|
| T |
29124143 |
tgatatgagaacaatgcaatggtcccatttaacactgccaagtttctcca |
29124094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 604 - 853
Target Start/End: Original strand, 32960616 - 32960865
Alignment:
| Q |
604 |
caagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacg |
703 |
Q |
| |
|
|||||| |||||||||||| |||| ||||||| | |||| ||||| ||||| ||| |||| ||||||||| || ||| | |||||||| |||||||| |
|
|
| T |
32960616 |
caagcttcacaatcatttgggtacccaaatcaaacaaaactaattcttcatcttttcttatgaagaatatttcccccttcttccccactcccataggacg |
32960715 |
T |
|
| Q |
704 |
ctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttca |
803 |
Q |
| |
|
||||| |||| ||| |||| ||| || ||||||||| |||| || ||||| |||||| |||| | ||||| |||| |||||| | |||||||||||| |
|
|
| T |
32960716 |
ctcaacacaaggcaatggtctaacaataaagagtttgatccaagattccttcataccgatttcatccaaaattgatacatgaaaagtagtcgtctcttca |
32960815 |
T |
|
| Q |
804 |
tgatatgagatcaatgcaatggacccatttaacaccgccaagtttatcca |
853 |
Q |
| |
|
| ||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
32960816 |
atgtgtgagaacaatgcaatggacccatttagcaccgccaagtttatcca |
32960865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 695 - 854
Target Start/End: Complemental strand, 29300182 - 29300023
Alignment:
| Q |
695 |
gataggacgctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtc |
794 |
Q |
| |
|
||||||||||| | ||||| |||||||||||| ||||||| |||||||| || |||||||||| | ||||| ||||| |||||||||||| | ||| |
|
|
| T |
29300182 |
gataggacgctggacgcaagccaacggtccaacattgaagagattggtccacgattcctttatactgagctcacccaaaattgatatgtgaaaagtagtc |
29300083 |
T |
|
| Q |
795 |
gtctcttcatgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccac |
854 |
Q |
| |
|
|||| || ||| |||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
29300082 |
gtctttttttgaaatgagatcaaggcaatggacccatttaacacagccaagtttatccac |
29300023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 604 - 854
Target Start/End: Complemental strand, 29137477 - 29137227
Alignment:
| Q |
604 |
caagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacg |
703 |
Q |
| |
|
|||||||| | |||||||| ||||||||||||| || ||||||||||||||| ||| | | | ||||||| || || || |||||||| | |||||| |
|
|
| T |
29137477 |
caagctcctcgatcatttgggtacttaaatcaaaccaagctagttctttatcttttcttgtaaaggatatttccccctttgtccccactccaaaaggacg |
29137378 |
T |
|
| Q |
704 |
ctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttca |
803 |
Q |
| |
|
||||| |||| ||| |||| ||| ||||||| ||||||||| ||||| ||||| |||||| ||||| |||| |||||| | | | ||| |||| |
|
|
| T |
29137377 |
ctcaacacaaggcaatggtctaactgtgaagagcctggtccatgtttccttcataccaacttcacccaaaatagatacatgaaaagtagccatcttttca |
29137278 |
T |
|
| Q |
804 |
tgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccac |
854 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
29137277 |
tgatatgatatcaatgcaatggacaaatttaacaccaccaagtttatccac |
29137227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 600 - 947
Target Start/End: Original strand, 34258133 - 34258480
Alignment:
| Q |
600 |
taagcaagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgatag |
699 |
Q |
| |
|
|||||||||||| ||||| |||| || || |||| || || |||||| |||||||| ||| |||| ||||||||| || || || |||| ||| || | |
|
|
| T |
34258133 |
taagcaagctcctcaatcgtttgggtgctcaaattaaaccaagctagttttttatcttttcttatgaagaatatttccccctttgtccccattccaatgg |
34258232 |
T |
|
| Q |
700 |
gacgctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctc |
799 |
Q |
| |
|
| || || |||||||| || ||||| | ||||||||| |||||||| || || | |||| ||| ||||| |||||||||||| |||| || | |
|
|
| T |
34258233 |
ggtacttaacgcaagacatcgatccaataacgaagagttttgtccatgattctttcacgccgtgttcgttcaaaattgatatgtgaaaagttgtagtttt |
34258332 |
T |
|
| Q |
800 |
ttcatgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtat |
899 |
Q |
| |
|
||||| |||||||| || |||||| ||||||||||||||||||||||||||||| | | || || ||||||||||| | |||||||||||| | |
|
|
| T |
34258333 |
ttcattatatgagagtaaggcaatgaacccatttaacaccgccaagtttatccactttgctttaacatcaaaacaatcatcaacgtatgagggtattggt |
34258432 |
T |
|
| Q |
900 |
gttatgaagaattcctcattgctaaagtaaaatgataccaaacatggt |
947 |
Q |
| |
|
||| ||||||| | |||||||| |||| ||||||||||||||||||| |
|
|
| T |
34258433 |
gttttgaagaacacatcattgcttaagtcaaatgataccaaacatggt |
34258480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 800 - 949
Target Start/End: Original strand, 23218674 - 23218823
Alignment:
| Q |
800 |
ttcatgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtat |
899 |
Q |
| |
|
||||||||| ||||||| |||||| || |||||||| ||||||||||||||| | | | | || ||| |||||||||||| ||| ||||| | |
|
|
| T |
23218674 |
ttcatgataagagatcattgcaattcactcatttaaccgtgccaagtttatccacgatgcttccacatcaaaagaatcatctaagtttgaaagtatgggt |
23218773 |
T |
|
| Q |
900 |
gttatgaagaattcctcattgctaaagtaaaatgataccaaacatggtcc |
949 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
23218774 |
gttactaagaacacctcattgctcaagtaaaatgacaccaaacatggtcc |
23218823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 777 - 849
Target Start/End: Original strand, 25319365 - 25319437
Alignment:
| Q |
777 |
gatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccatttaacaccgccaagttta |
849 |
Q |
| |
|
|||| ||||||| | ||| ||| |||||||||||||||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
25319365 |
gatacgtgaaaagtagtcatcttttcatgatatgagatcaaagcaacatacccatttaacaccaccaagttta |
25319437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 777 - 849
Target Start/End: Original strand, 26149058 - 26149130
Alignment:
| Q |
777 |
gatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccatttaacaccgccaagttta |
849 |
Q |
| |
|
|||| ||||||| | ||| ||| |||||||||||||||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
26149058 |
gatacgtgaaaagtagtcatcttttcatgatatgagatcaaagcaacatacccatttaacaccaccaagttta |
26149130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1049 - 1096
Target Start/End: Original strand, 32961070 - 32961117
Alignment:
| Q |
1049 |
aacatcaagtatcctccacgagttagttcttaagctatatatcaccca |
1096 |
Q |
| |
|
|||||||||| |||||||||||||| |||||| |||||||||| |||| |
|
|
| T |
32961070 |
aacatcaagtttcctccacgagttacttcttacgctatatatctccca |
32961117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 516 - 578
Target Start/End: Original strand, 32740526 - 32740588
Alignment:
| Q |
516 |
aaaaataactaattacttattcctccaattggaagaatgttttccttgtacattactatccga |
578 |
Q |
| |
|
||||| |||||||||||| ||||||||||| ||||||| || |||| ||| |||| ||||||| |
|
|
| T |
32740526 |
aaaaaaaactaattacttgttcctccaatttgaagaatattatcctcgtatattattatccga |
32740588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 126; Significance: 2e-64; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 516 - 949
Target Start/End: Complemental strand, 42446620 - 42446188
Alignment:
| Q |
516 |
aaaaataactaattacttattcctccaattggaagaatgttttccttgtacattactatccgatcaatagaattcacttctttgtaagcaagctccacaa |
615 |
Q |
| |
|
||||| || |||||| |||||||||||||||||||||||||||||||||| |||| || |||| || ||| | | || |||| ||| ||||| || ||| |
|
|
| T |
42446620 |
aaaaacaattaattaattattcctccaattggaagaatgttttccttgtatattattacccgagcagtaggaccccctcctttataaccaagcccctcaa |
42446521 |
T |
|
| Q |
616 |
tcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctcaatgcaaga |
715 |
Q |
| |
|
|||| | |||||||||||||| || |||||||| ||||| ||| |||| |||||||||||||||| | |||||| ||||||||||||||| ||| |
|
|
| T |
42446520 |
tcatcttggtacttaaatcaagccaagctagttctccatcttttctaatgaagaatatttctcctttcatccccacttcgataggacgctcaacacaatg |
42446421 |
T |
|
| Q |
716 |
caacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatc |
815 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||| ||||| ||| | |||||| ||||| |||||||||||| | ||||| ||||||| |||||||| |
|
|
| T |
42446420 |
caacggtccaacaatgacgagtttggtccatgattccttgatagcaagttcacccaaaattgatatgtgaaaa-aagccgtcttttcatgaaatgagatc |
42446322 |
T |
|
| Q |
816 |
aatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcct |
915 |
Q |
| |
|
|| ||||||||| | |||||||| |||||||||||||| | || || ||||||| ||||||||| ||||||||| ||| |||||||| | | |
|
|
| T |
42446321 |
aaggcaatggactcgtttaacacaaccaagtttatccacgattctccaacatagaaacaaccatctaagtctgagggtataggtgtggtgaagaatacat |
42446222 |
T |
|
| Q |
916 |
cattgctaaagtaaaatgataccaaacatggtcc |
949 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||| |
|
|
| T |
42446221 |
cattgctcaagtcaaatgataccaaacatggtcc |
42446188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 668 - 949
Target Start/End: Complemental strand, 7793951 - 7793670
Alignment:
| Q |
668 |
gaatatttctcctttcgttcccactccgataggacgctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattca |
767 |
Q |
| |
|
||||||||| |||||||| |||||||| ||||||||||| ||| |||| || ||||||| ||||||||||| ||||| || |||| | |||| ||| | |
|
|
| T |
7793951 |
gaatatttcccctttcgtccccactccaataggacgctcgatgaaagaaaatggtccaataatgaagagtttagtccacgatcccttcacaccgaattta |
7793852 |
T |
|
| Q |
768 |
ccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagat |
867 |
Q |
| |
|
| ||||| | ||| || ||||| | ||| |||||||| ||| |||||| | |||| | |||||||||||| |||| ||||||||| | | | || | |
|
|
| T |
7793851 |
tccaaaatggctatatggaaattattagtcacttcatgaaatgtgatcaaggaaatgtagccatttaacaccaccaaatttatccacgaagctttaaatt |
7793752 |
T |
|
| Q |
868 |
tgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcctcattgctaaagtaaaatgataccaaacatggtcc |
949 |
Q |
| |
|
| |||||||||||| | ||| ||||| |||||||||||| |||||||||| |||||||| |||| ||||||| |||| |
|
|
| T |
7793751 |
taaaacaatcatcttcatctgaaggtataggtgttatgaagaacgcctcattgctcaagtaaaaagatagcaaacatagtcc |
7793670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 977 - 1096
Target Start/End: Complemental strand, 42446142 - 42446026
Alignment:
| Q |
977 |
caaccaatgacacacaccatccatgtagacttgagtgccgtcaatacatgccaatgaacaaggcatgctagaaacatcaagtatcctccacgagttagtt |
1076 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||||| ||||||||| |||| ||| |||||||| |||||||||| ||||||||| |||| || |
|
|
| T |
42446142 |
caaccaatgacacactccatccatgtagacttgggtgccctcaatacattccaaagaataaggcatg---tcaacatcaagtttcctccacgggttactt |
42446046 |
T |
|
| Q |
1077 |
cttaagctatatatcaccca |
1096 |
Q |
| |
|
|||| ||||||||| |||| |
|
|
| T |
42446045 |
cttagactatatatctccca |
42446026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1158 - 1208
Target Start/End: Complemental strand, 42445934 - 42445884
Alignment:
| Q |
1158 |
atgaccttatagtcatttctaagattgtcgtaaccaaatccatgaagataa |
1208 |
Q |
| |
|
|||||||||||||||| | ||| | |||| ||||||||||||||||||||| |
|
|
| T |
42445934 |
atgaccttatagtcatctgtaacactgtcataaccaaatccatgaagataa |
42445884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0134 (Bit Score: 81; Significance: 2e-37; HSPs: 1)
Name: scaffold0134
Description:
Target: scaffold0134; HSP #1
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 533 - 945
Target Start/End: Original strand, 16037 - 16449
Alignment:
| Q |
533 |
tattcctccaattggaagaatgttttccttgtacattactatccgatcaatagaattcacttctttgtaagcaagctccacaatcatttgagtacttaaa |
632 |
Q |
| |
|
|||||||||| || |||||||||| ||||||| |||| ||||||| || | ||| | || |||| ||| |||| ||| |||||||||||||| | | | |
|
|
| T |
16037 |
tattcctccatctgtaagaatgtttaccttgtatattattatccgagcacaacaatcccctgctttataaccaagttcctcaatcatttgagtattaaga |
16136 |
T |
|
| Q |
633 |
tcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctcaatgcaagacaacggtccaaccatga |
732 |
Q |
| |
|
|||| || ||| ||||| ||| | ||| || ||||| ||| ||||| || |||||||||||||||| | || ||||||||| ||||||| ||| |
|
|
| T |
16137 |
tcaaaccaagctaattcttcatcctttctttggaagaataattccccttttgtccccactccgataggacacctaacgcaagacaatggtccaatagtga |
16236 |
T |
|
| Q |
733 |
agagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccatt |
832 |
Q |
| |
|
|||| ||| ||||||| ||||| |||| |||||| ||||| |||||||||||| | ||| | ||||||||| ||||||||||||||| || |||| |
|
|
| T |
16237 |
agagattgatccatgattccttcttaccaatttcacccaaaattgatatgtgaaaagtagtccttggttcatgataagagatcaatgcaatgcactcatt |
16336 |
T |
|
| Q |
833 |
taacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcctcattgctaaagtaaaat |
932 |
Q |
| |
|
|||| |||||||||||||| | | | || || |||||||||||||||| |||||||||| |||||| ||||| |||||||||| ||||||||| |
|
|
| T |
16337 |
taaccgtgccaagtttatccatgatgcttcaacatcaaaacaatcatctaagtttgagggtatgggtgttattaagaacacctcattgctcaagtaaaat |
16436 |
T |
|
| Q |
933 |
gataccaaacatg |
945 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
16437 |
gacaccaaacatg |
16449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0613 (Bit Score: 72; Significance: 4e-32; HSPs: 1)
Name: scaffold0613
Description:
Target: scaffold0613; HSP #1
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 465 - 947
Target Start/End: Complemental strand, 534 - 49
Alignment:
| Q |
465 |
actttgtatataaggtaatatcccaatcaccacaatcattttactcctggtaaaaata---actaattacttattcctccaattggaagaatgttttcct |
561 |
Q |
| |
|
|||||| ||| ||||||||||| |||| |||| |||||| | ||| ||| |||||| | ||||||| |||||||||| || |||||||||||||| |
|
|
| T |
534 |
actttgcatacaaggtaatatctcaataaccataatcatatacctcttggagaaaatagaaattaattacctattcctccattttcaagaatgttttcct |
435 |
T |
|
| Q |
562 |
tgtacattactatccgatcaatagaattcacttctttgtaagcaagctccacaatcatttgagtacttaaatcaagacacactagttctttatcttgtct |
661 |
Q |
| |
|
|||| |||| ||||||| | | ||| | || |||| ||| |||| ||| |||||||||||||| | ||||| || ||| ||||| ||| | ||| |
|
|
| T |
434 |
tgtatattattatccgagtacgacaatcccctgctttataaccaagttcctcaatcatttgagtatgaagatcaaaccaagctaattcttcatcctttct |
335 |
T |
|
| Q |
662 |
gatgacgaatatttctcctttcgttcccactccgataggacgctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccg |
761 |
Q |
| |
|
|| ||||| ||| ||||| | ||||||||||||||| ||||| ||||||||| ||||||| ||||| | ||||||||||| || || | || |
|
|
| T |
334 |
ttggaagaataattccccttttttccccactccgataggaaactcaacgcaagacaatggtccaatagtgaagtgattggtccatgattcattctttcca |
235 |
T |
|
| Q |
762 |
tattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccatttaacaccgccaagtttatccacaaggtgt |
861 |
Q |
| |
|
|||||| ||||| |||||||||||| | ||| | | ||||||| ||||||||||||||| || |||||||| |||||||||||||| | | | |
|
|
| T |
234 |
atttcacccaaaattgatatgtgaaaagtagtccttggtacatgataagagatcaatgcaatgcactcatttaaccatgccaagtttatccaggatgctt |
135 |
T |
|
| Q |
862 |
gaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcctcattgctaaagtaaaatgataccaaacatggt |
947 |
Q |
| |
|
|| || |||||||||||||||| |||||||||| |||||| ||||| |||||||||| ||||||||||| |||||||||||| |
|
|
| T |
134 |
caacatcaaaacaatcatctaagtttgagggtatgggtgttattaagaacacctcattgctcaagtaaaatgacaccaaacatggt |
49 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054 (Bit Score: 58; Significance: 9e-24; HSPs: 2)
Name: scaffold0054
Description:
Target: scaffold0054; HSP #1
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 516 - 1009
Target Start/End: Original strand, 33262 - 33749
Alignment:
| Q |
516 |
aaaaataactaattacttattcctccaattggaagaatgttttccttgtacattactatccgatcaatagaattcacttctttgtaagcaagctccacaa |
615 |
Q |
| |
|
|||||||| ||||||||||||||| |||| | |||||||||||||||||| | | ||||||| | || | | | |||| ||| ||||||| ||| |
|
|
| T |
33262 |
aaaaataattaattacttattccttcaatggcaagaatgttttccttgtatagtgatatccgagtataaggaccccttgctttataaccaagctcttcaa |
33361 |
T |
|
| Q |
616 |
tcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctcaatgcaaga |
715 |
Q |
| |
|
||| ||| ||||||| ||||| || ||| ||| ||||||| || || ||| ||||| |||||||| ||||||| |||||||||||||| |||||| |
|
|
| T |
33362 |
tcacttgggtacttagatcaaaccaagctaattcattatctttcctttggaagaaaatttcccctttcgtccccactctgataggacgctcaacgcaaga |
33461 |
T |
|
| Q |
716 |
caacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatc |
815 |
Q |
| |
|
|||||||||||| |||||||||||||||| || ||||| || ||| |||||| ||||| | ||||| |||| | || ||||| |||| | | |||| |
|
|
| T |
33462 |
caacggtccaacagtgaagagtttggtccacgattccttaatgccgagttcacccaaaattgctatgtcaaaagtagtagtctcccgatgaaacgcgatc |
33561 |
T |
|
| Q |
816 |
aatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcct |
915 |
Q |
| |
|
|| | |||||| |||||||| | | |||| |||||| | | | | || || ||||| |||||| | ||||||||| |||||| |||| ||| |
|
|
| T |
33562 |
aaggaaatggaaccatttaataacaccaaatttatcgatgaagctttaaatttaaaacagtcatcttcatccgagggtatgggtgttatacagaacacct |
33661 |
T |
|
| Q |
916 |
cattgctaaagtaaaatgataccaaacatggtccctccagggtatcatcaacttcttcagccaaccaatgacacacaccatccatgtagacttg |
1009 |
Q |
| |
|
|||| || |||||||||||||| ||||||||||| | |||||| || |||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
33662 |
catttctcaagtaaaatgatactaaacatggtccagcaggggtat--tc----tcttcacacaaccaatgacacactccatccatgtagacttg |
33749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0054; HSP #2
Raw Score: 58; E-Value: 9e-24
Query Start/End: Original strand, 516 - 1009
Target Start/End: Original strand, 39613 - 40100
Alignment:
| Q |
516 |
aaaaataactaattacttattcctccaattggaagaatgttttccttgtacattactatccgatcaatagaattcacttctttgtaagcaagctccacaa |
615 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||||||||||||||| | | ||||||| | || | | | |||| ||| ||||||| ||| |
|
|
| T |
39613 |
aaaaataattaattacttattccttcaattacaagaatgttttccttgtatagtgatatccgagtataaggaccccttgctttataaccaagctcttcaa |
39712 |
T |
|
| Q |
616 |
tcatttgagtacttaaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctcaatgcaaga |
715 |
Q |
| |
|
||| ||| ||||||| ||||| || ||| ||| ||||||| ||| || ||| ||||| ||||| || |||||||||||||||||||||| |||||| |
|
|
| T |
39713 |
tcacttgggtacttagatcaaaccaagctaattcattatcttttctttggaagaaaatttccccttttgtccccactccgataggacgctcaacgcaaga |
39812 |
T |
|
| Q |
716 |
caacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatc |
815 |
Q |
| |
|
|||||||||||| | ||||||||| |||| || ||||| || ||| |||||| ||||| | |||||||||| | || ||||| |||| | | || |
|
|
| T |
39813 |
caacggtccaacagtaaagagtttgatccacgattccttaatgccgagttcacccaaaattgctatgtgaaaagtagtagtctcccgatgaaacgcagtc |
39912 |
T |
|
| Q |
816 |
aatgcaatggacccatttaacaccgccaagtttatccacaaggtgtgaagattgaaacaatcatctaagtatgagggtatgtatgttatgaagaattcct |
915 |
Q |
| |
|
|| | ||||||||||||||||| | |||| |||||| | | | || || |||||||||||| | ||||||||| |||||| |||| ||| |
|
|
| T |
39913 |
aaggaaatggacccatttaacaacaccaaatttatctttgaagctttaaatttaaaacaatcatcttcatccgagggtatgggtgttatacagaacacct |
40012 |
T |
|
| Q |
916 |
cattgctaaagtaaaatgataccaaacatggtccctccagggtatcatcaacttcttcagccaaccaatgacacacaccatccatgtagacttg |
1009 |
Q |
| |
|
|||| || |||||||||||||| ||||||||||| | |||||| || |||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
40013 |
catttctcaagtaaaatgatactaaacatggtccagcaggggtat--tc----tcttcacacaaccaatgacacactccatccatgtagacttg |
40100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 34; Significance: 0.000000002; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 532 - 846
Target Start/End: Complemental strand, 32643216 - 32642902
Alignment:
| Q |
532 |
ttattcctccaattggaagaatgttttccttgtacattactatccgat---caatagaattcacttctttgtaagcaagctccacaatcatttgagtact |
628 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||| | ||||||||||| || | || || |||| | |||| ||| |||||||||| ||||| |
|
|
| T |
32643216 |
ttattccaccaattggaagaaggttttccttgtaaactactatccgataaccacgactatctcctcctttaacatcaaggtcctcaatcatttgggtact |
32643117 |
T |
|
| Q |
629 |
taaatcaagacacactagttctttatcttgtctgatgacgaatatttctcctttcgttcccactccgataggacgctcaatgcaagacaacggtccaacc |
728 |
Q |
| |
|
|||||||| || |||||| |||| ||| | | ||| |||||||| || | |||||||||| | ||||||||| | || |||| |||||||| |
|
|
| T |
32643116 |
taaatcaaaccaagctagttttttaactttttttttgaagaatattttgcc---ctttcccactccaaaaggacgctcgacacatgacagaggtccaaca |
32643020 |
T |
|
| Q |
729 |
atgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacc |
828 |
Q |
| |
|
|||||||||||| ||||||| ||||| | | |||||| ||||| ||||||| |||| | | | | | ||| ||||||| |||||| |||||||| | |
|
|
| T |
32643019 |
atgaagagtttgatccatgattccttcacagttaattcactcaaaattgatatgttaaaagtagccatttgttcttgatatgtgatcaacgcaatggatc |
32642920 |
T |
|
| Q |
829 |
catttaacaccgccaagt |
846 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
32642919 |
catttaacaccgccaagt |
32642902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 720 - 787
Target Start/End: Original strand, 39724568 - 39724635
Alignment:
| Q |
720 |
ggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaa |
787 |
Q |
| |
|
|||||||| ||||||||||| |||||||| || ||||||||| ||| || ||||| ||||||||||| |
|
|
| T |
39724568 |
ggtccaacaatgaagagtttagtccatgattcttttataccgagttcccccaaaattgatatgtgaaa |
39724635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 732 - 839
Target Start/End: Complemental strand, 40549336 - 40549229
Alignment:
| Q |
732 |
aagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccat |
831 |
Q |
| |
|
||||||||| ||||||| ||||| | |||| |||||| ||||| |||||||||| | || |||||| |||||| | |||||||| |||| | | |||| |
|
|
| T |
40549336 |
aagagtttgatccatgattccttcacaccgacttcacccaaaattgatatgtgaatagttttcgtcttttcatgtaaagagatcaaagcaacgaagccat |
40549237 |
T |
|
| Q |
832 |
ttaacacc |
839 |
Q |
| |
|
|||||||| |
|
|
| T |
40549236 |
ttaacacc |
40549229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 668 - 839
Target Start/End: Original strand, 42564916 - 42565087
Alignment:
| Q |
668 |
gaatatttctcctttcgttcccactccgataggacgctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattca |
767 |
Q |
| |
|
|||||||||||| ||| |||||||||| |||||| | || ||||| || |||||||| ||||| |||||| ||||||| ||||| | ||| |||| |
|
|
| T |
42564916 |
gaatatttctcccttctttcccactccaataggaatatgaacgcaaggcagtggtccaacaatgaaaagtttgatccatgattccttgacacctagttca |
42565015 |
T |
|
| Q |
768 |
ccaaaaatcgatatgtgaaaatttgtcgtctcttcatgatatgagatcaatgcaatggacccatttaacacc |
839 |
Q |
| |
|
|| |||| ||||||| |||| | || ||| || ||||||| |||||| ||||| || |||||||||||| |
|
|
| T |
42565016 |
cccaaaactgatatgttaaaagtagttatcttctcgtgatatgtgatcaaagcaatcgatccatttaacacc |
42565087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 532 - 574
Target Start/End: Complemental strand, 43323054 - 43323012
Alignment:
| Q |
532 |
ttattcctccaattggaagaatgttttccttgtacattactat |
574 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||| |||| |
|
|
| T |
43323054 |
ttattcctccaattggaagcatgttttccttgtaaattcctat |
43323012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1050 - 1099
Target Start/End: Complemental strand, 40549030 - 40548981
Alignment:
| Q |
1050 |
acatcaagtatcctccacgagttagttcttaagctatatatcacccaaat |
1099 |
Q |
| |
|
||||||||| |||||||||||||| |||||| |||||| ||| ||||||| |
|
|
| T |
40549030 |
acatcaagtttcctccacgagttacttcttaggctataaatctcccaaat |
40548981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 693 - 822
Target Start/End: Original strand, 17125 - 17254
Alignment:
| Q |
693 |
ccgataggacgctcaatgcaagacaacggtccaaccatgaagagtttggtccatgactcctttataccgtattcaccaaaaatcgatatgtgaaaatttg |
792 |
Q |
| |
|
||||||||| |||||||||||| || ||||||| | ||||||||| ||||| |||||||| | |||| |||||| | ||| || ||||||||| | | |
|
|
| T |
17125 |
ccgataggatgctcaatgcaaggtaaaggtccaataacgaagagtttagtccaagactccttcacaccgagttcacccagaatagaaatgtgaaaagtag |
17224 |
T |
|
| Q |
793 |
tcgtctcttcatgatatgagatcaatgcaa |
822 |
Q |
| |
|
|| | ||| ||| | |||||||||||||| |
|
|
| T |
17225 |
tcatttctacatagtttgagatcaatgcaa |
17254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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