View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8211_high_17 (Length: 253)
Name: NF8211_high_17
Description: NF8211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8211_high_17 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 33675635 - 33675399
Alignment:
| Q |
17 |
agatcaaataaaagagttgacttcagagggagcttttgatttccaaagtgattaatcaagaagaaaaatagcccaactcaacccaaagaatgcgtaagga |
116 |
Q |
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| T |
33675635 |
agatcaaataaaagagttgacttcagagggagcttttgatttccaaagtgattaatcaagaagaaaaatagcccaactcaacccaaagaatgcgtaagga |
33675536 |
T |
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| Q |
117 |
attatatacaacggcaagctttgcaagttgcaacaacnnnnnnncagcccagaaagatcaaaggactaattccttttattcatgttacaagataaatgaa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33675535 |
attatatacaacggcaagctttgcaagttgcaacaacaaaaaaacagcccagaaagatcaaaggactaattccttttattcatgttacaagataaatgaa |
33675436 |
T |
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| Q |
217 |
tagaatcaaatttattatgtatgtaagaattgactgg |
253 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
33675435 |
tagaatcaaatttattatgtatgtaagaattgactgg |
33675399 |
T |
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