View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8214_high_1 (Length: 974)

Name: NF8214_high_1
Description: NF8214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8214_high_1
NF8214_high_1
[»] chr2 (4 HSPs)
chr2 (293-904)||(31479833-31480439)
chr2 (13-240)||(31479553-31479780)
chr2 (903-956)||(13203696-13203752)
chr2 (912-956)||(22572831-22572877)
[»] chr4 (6 HSPs)
chr4 (905-956)||(32005846-32005899)
chr4 (905-956)||(31364067-31364120)
chr4 (906-952)||(1585642-1585690)
chr4 (905-959)||(9003488-9003544)
chr4 (903-956)||(52373668-52373723)
chr4 (906-956)||(49744972-49745024)
[»] chr3 (5 HSPs)
chr3 (905-956)||(53651835-53651888)
chr3 (905-940)||(37516567-37516602)
chr3 (905-956)||(44047520-44047574)
chr3 (905-959)||(9600287-9600343)
chr3 (905-959)||(26278289-26278344)
[»] chr1 (5 HSPs)
chr1 (905-956)||(8239210-8239263)
chr1 (904-956)||(37154121-37154176)
chr1 (905-956)||(14727248-14727302)
chr1 (905-956)||(44305342-44305396)
chr1 (906-956)||(44238990-44239042)
[»] chr5 (10 HSPs)
chr5 (905-959)||(37607386-37607442)
chr5 (905-959)||(37779595-37779651)
chr5 (904-956)||(35468820-35468874)
chr5 (904-954)||(767230-767282)
chr5 (905-959)||(1672615-1672671)
chr5 (919-959)||(2476349-2476391)
chr5 (905-940)||(15675232-15675267)
chr5 (905-956)||(34443896-34443950)
chr5 (905-959)||(16567721-16567778)
chr5 (905-959)||(43228771-43228827)
[»] chr8 (1 HSPs)
chr8 (898-959)||(27321978-27322041)
[»] scaffold0075 (1 HSPs)
scaffold0075 (904-956)||(11455-11509)
[»] chr7 (3 HSPs)
chr7 (905-956)||(26723081-26723134)
chr7 (905-956)||(41759751-41759804)
chr7 (905-956)||(35300571-35300625)
[»] chr6 (4 HSPs)
chr6 (905-940)||(9047076-9047111)
chr6 (905-956)||(10397923-10397977)
chr6 (905-956)||(9695975-9696028)
chr6 (905-958)||(28614512-28614568)
[»] scaffold0021 (1 HSPs)
scaffold0021 (905-956)||(109442-109494)


Alignment Details
Target: chr2 (Bit Score: 531; Significance: 0; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 531; E-Value: 0
Query Start/End: Original strand, 293 - 904
Target Start/End: Original strand, 31479833 - 31480439
Alignment:
Q  293 ttccttctgattaggaaaaagatttgtgaaggaggggtaatttggtaccaactagtggattataatgacaattactatgctaataccaactagtgtccta 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31479833 ttccttctgattaggaaaaagatttgtgaaggaggggtaatttggtaccaaccagtggattataatgacaattactatgctaataccaactagtgtccta 31479932  T
Q  393 ttttagtgtttagactaaatttattatgatttatgaatattctttaacagtttacagcttgacagttgtattgtgagtgtcacagaagttggtggtaacc 492  Q
    |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31479933 ttttagtgtttgacctaaatttattatgatttatgaatattctttaacagtttacagcttgacagttgtattgtgagtgtcacagaagttggtggtaacc 31480032  T
Q  493 tgcactagtacacatgattaaccagttaaaaagttataattatgaaatcatgattttctctcaacttttatatattgaaaacattctaggttaaaggtgt 592  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31480033 tgcactagtacacatgattaaccggttagaaagttataattatgaaatcatgattttctctcaacttttatatattgaaaacattctaggttaaaggtgt 31480132  T
Q  593 gaaaactgatgtcttaacgaagaaatggaagagtctgaagcaaaggttgaaactatgagtgtaagagatcggtttggtttttaagaaaacataaattcaa 692  Q
    |||||| ||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||||||||||||||    
T  31480133 gaaaaccgatgtcttaaataagaaatggaagagtctgaagcaaaggttgaaattatgagtgta----atcggtttggtttttaagaaaacataaattcaa 31480228  T
Q  693 acaaataaaaataattgatttgatttggttaggtttggtttttgcaatcttttctcgcaaaatcaaaaccaatgaaaatgaggcattgattaattagttt 792  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31480229 acaaat-aaaataattgatttgatttgattaggtttggtttttgcaatcttttctcgcaaaatcaaaaccaatgaaaatgaggcattgatttattagttt 31480327  T
Q  793 tgttcaatcgggttgacgtgtttaaaaattttagaaacattatctaaaaagtctaagaaaattaacttttaagaaacttttatactattaaaacaagtat 892  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31480328 ggttcaatcgggttgacatgtttaaaaattttagaaacattatctaaaaagtctaagaaaattaacttttaagaaacttttatactattaaaacaagtat 31480427  T
Q  893 ataaactgcaat 904  Q
    ||||||||||||    
T  31480428 ataaactgcaat 31480439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 13 - 240
Target Start/End: Original strand, 31479553 - 31479780
Alignment:
Q  13 cagagaaacataggaagaaaatgaagagaagatgaaaagagataaatttattcattgctgatggggtggggtgaaggagtgtgaaggtatcagagaaaca 112  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31479553 cagagaaacataggaagaaaatgaagagaagataaaaagagataaatttgttcattgctgatggggtggggtgaaggagtgtgaaggtataagagaaaca 31479652  T
Q  113 ataactttaattataagggtgggctgaaggagtatataaagcagcgcatctgtttcttactgctttaaaaggtatatgaaacaataaatttaattataag 212  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31479653 ataactttaattataaggatgggctgaaggagtatataaagcagtgcatgtgtttcttactgctttaaaaggtatatgaaacaataaatttaattataag 31479752  T
Q  213 gtaagagattatataaggaacaataatt 240  Q
    ||||||||||||||||||||||||||||    
T  31479753 gtaagagattatataaggaacaataatt 31479780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 903 - 956
Target Start/End: Original strand, 13203696 - 13203752
Alignment:
Q  903 atcaggggtggagccacccc-cagctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  13203696 atcaggggtggagccaccccccagctagcctgggctagtgcccaggctcagctccaa 13203752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 912 - 956
Target Start/End: Complemental strand, 22572877 - 22572831
Alignment:
Q  912 ggagccacccccagctagcctgggcta--gtccaggctcagctccaa 956  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||    
T  22572877 ggagccacccccggctagcctgggctagtgtccaggctcagctccaa 22572831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 905 - 956
Target Start/End: Original strand, 32005846 - 32005899
Alignment:
Q  905 caggggtggagccacccccagctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||    
T  32005846 caggggcggagccacccccagctagcctgggctagtgcccaggctcagctccaa 32005899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 956
Target Start/End: Original strand, 31364067 - 31364120
Alignment:
Q  905 caggggtggagccacccccagctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| |||||||||||||||||||||||||||||  |||||||| |||||||    
T  31364067 caggggcggagccacccccagctagcctgggctagtgcccaggctcggctccaa 31364120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 906 - 952
Target Start/End: Original strand, 1585642 - 1585690
Alignment:
Q  906 aggggtggagccacccccagctagcctgggctagt--ccaggctcagct 952  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  1585642 aggggcggagccacccccagctagcctgggctagtgcccaggctcagct 1585690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 905 - 959
Target Start/End: Original strand, 9003488 - 9003544
Alignment:
Q  905 caggggtggagccacccccagctagcctgggc--tagtccaggctcagctccaattt 959  Q
    |||||| | ||||||||||||||||||| |||  |||||||||||||||||||||||    
T  9003488 caggggcgtagccacccccagctagcctaggcactagtccaggctcagctccaattt 9003544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 903 - 956
Target Start/End: Original strand, 52373668 - 52373723
Alignment:
Q  903 atcaggggtggagccacccccagctagcctggg--ctagtccaggctcagctccaa 956  Q
    |||||||| |||||||||||||||||| |||||  |||| ||||||||||||||||    
T  52373668 atcaggggcggagccacccccagctagtctgggcactagcccaggctcagctccaa 52373723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 906 - 956
Target Start/End: Original strand, 49744972 - 49745024
Alignment:
Q  906 aggggtggagccacccccagctagcctgggc--tagtccaggctcagctccaa 956  Q
    ||||| ||||||| |||||||||| ||||||  ||||||||||||||||||||    
T  49744972 aggggcggagccaaccccagctagtctgggcactagtccaggctcagctccaa 49745024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 905 - 956
Target Start/End: Original strand, 53651835 - 53651888
Alignment:
Q  905 caggggtggagccacccccagctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||    
T  53651835 caggggcggagccacccccagctagcctgggctagtgcccaggctcagctccaa 53651888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 37516567 - 37516602
Alignment:
Q  905 caggggtggagccacccccagctagcctgggctagt 940  Q
    |||||| |||||||||||||||||||||||||||||    
T  37516567 caggggcggagccacccccagctagcctgggctagt 37516602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 956
Target Start/End: Original strand, 44047520 - 44047574
Alignment:
Q  905 caggggtggagccacccc-cagctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  44047520 caggggcggagccaccccccagctagcctgggctagtacccaggctcagctccaa 44047574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 905 - 959
Target Start/End: Original strand, 9600287 - 9600343
Alignment:
Q  905 caggggtggagccacccccagctagcctggg--ctagtccaggctcagctccaattt 959  Q
    |||||| ||||||||||||||||||||||||  |||| ||| |||||||||| ||||    
T  9600287 caggggcggagccacccccagctagcctgggcactagcccaagctcagctcctattt 9600343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 905 - 959
Target Start/End: Original strand, 26278289 - 26278344
Alignment:
Q  905 caggggtggagccacccccagctagcctgggc--tagtccaggctcagctccaattt 959  Q
    |||||| ||||||||||| |||||||||||||  ||| |||||||||||||||||||    
T  26278289 caggggcggagccacccc-agctagcctgggcactagcccaggctcagctccaattt 26278344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 905 - 956
Target Start/End: Original strand, 8239210 - 8239263
Alignment:
Q  905 caggggtggagccacccccagctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||    
T  8239210 caggggcggagccacccccagctagcctgggctagtgcccaggctcagctccaa 8239263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 904 - 956
Target Start/End: Complemental strand, 37154176 - 37154121
Alignment:
Q  904 tcaggggtggagccaccccc-agctagcctgggctagt--ccaggctcagctccaa 956  Q
    ||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  37154176 tcaggggcggagccaccccccagctagcctgggctagtgcccaggctcagctccaa 37154121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 956
Target Start/End: Original strand, 14727248 - 14727302
Alignment:
Q  905 caggggtggagccaccccca-gctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| ||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  14727248 caggggcggagccacccccaagctagcctgggctagtgcccaggctcagctccaa 14727302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 956
Target Start/End: Original strand, 44305342 - 44305396
Alignment:
Q  905 caggggtggagccacccc-cagctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  44305342 caggggcggagccaccccccagctagcctgggctagtgcccaggctcagctccaa 44305396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 906 - 956
Target Start/End: Complemental strand, 44239042 - 44238990
Alignment:
Q  906 aggggtggagccacccccagctagcctggg--ctagtccaggctcagctccaa 956  Q
    ||||| |||||||||||||||||| |||||  |||| ||||||||||||||||    
T  44239042 aggggcggagccacccccagctagtctgggcactagcccaggctcagctccaa 44238990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000006; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 905 - 959
Target Start/End: Original strand, 37607386 - 37607442
Alignment:
Q  905 caggggtggagccacccccagctagcctggg--ctagtccaggctcagctccaattt 959  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  37607386 caggggcggagccacccccagctagcctgggcactagtccaggctcaactccaattt 37607442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 905 - 959
Target Start/End: Original strand, 37779595 - 37779651
Alignment:
Q  905 caggggtggagccacccccagctagcctggg--ctagtccaggctcagctccaattt 959  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  37779595 caggggcggagccacccccagctagcctgggcactagtccaggctcaactccaattt 37779651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 904 - 956
Target Start/End: Original strand, 35468820 - 35468874
Alignment:
Q  904 tcaggggtggagccacccccagctagcctgggctagt--ccaggctcagctccaa 956  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||| |||||||    
T  35468820 tcaggggcggagccacccccagctagcctgggctagtgcccaggctcggctccaa 35468874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 904 - 954
Target Start/End: Original strand, 767230 - 767282
Alignment:
Q  904 tcaggggtggagccacccccagctagcctggg--ctagtccaggctcagctcc 954  Q
    ||||||| ||||||||||||||||||||||||  |||| ||||||||||||||    
T  767230 tcaggggcggagccacccccagctagcctgggcactagcccaggctcagctcc 767282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 905 - 959
Target Start/End: Complemental strand, 1672671 - 1672615
Alignment:
Q  905 caggggtggagccacccccagctagcctggg--ctagtccaggctcagctccaattt 959  Q
    |||||| ||||||||||||||||||||||||  ||||  ||||||||||||||||||    
T  1672671 caggggcggagccacccccagctagcctgggcactagctcaggctcagctccaattt 1672615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 919 - 959
Target Start/End: Original strand, 2476349 - 2476391
Alignment:
Q  919 cccccagctagcctgggctagt--ccaggctcagctccaattt 959  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  2476349 cccccagctagcctgggctagtgcccaggctcagctccaattt 2476391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Original strand, 15675232 - 15675267
Alignment:
Q  905 caggggtggagccacccccagctagcctgggctagt 940  Q
    |||||| |||||||||||||||||||||||||||||    
T  15675232 caggggcggagccacccccagctagcctgggctagt 15675267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 956
Target Start/End: Original strand, 34443896 - 34443950
Alignment:
Q  905 caggggtggagccacccc-cagctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  34443896 caggggcggagccaccccccagctagcctgggctagtgcccaggctcagctccaa 34443950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 959
Target Start/End: Original strand, 16567721 - 16567778
Alignment:
Q  905 caggggtggagccaccccc-agctagcctgggc--tagtccaggctcagctccaattt 959  Q
    |||||| |||||||||||| |||||||||||||  ||| |||||||||||||||||||    
T  16567721 caggggcggagccaccccccagctagcctgggcactagcccaggctcagctccaattt 16567778  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 905 - 959
Target Start/End: Complemental strand, 43228827 - 43228771
Alignment:
Q  905 caggggtggagccacccccagctagcctggg--ctagtccaggctcagctccaattt 959  Q
    |||||| ||||||||||||||||||||||||  |||| | ||||||| |||||||||    
T  43228827 caggggcggagccacccccagctagcctgggcactagccaaggctcaactccaattt 43228771  T

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Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 898 - 959
Target Start/End: Complemental strand, 27322041 - 27321978
Alignment:
Q  898 ctgcaatcaggggtggagccacccccagctagcctggg--ctagtccaggctcagctccaattt 959  Q
    |||||| |||||| ||||||||||||||||||||||||  || | |||||||||||||||||||    
T  27322041 ctgcaagcaggggcggagccacccccagctagcctgggcacttgcccaggctcagctccaattt 27321978  T

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Target: scaffold0075 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 904 - 956
Target Start/End: Original strand, 11455 - 11509
Alignment:
Q  904 tcaggggtggagccacccccagctagcctgggctagt--ccaggctcagctccaa 956  Q
    ||||||| ||||||||||||||||||||||| |||||  ||||||||||||||||    
T  11455 tcaggggcggagccacccccagctagcctggactagtgcccaggctcagctccaa 11509  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000004; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 956
Target Start/End: Complemental strand, 26723134 - 26723081
Alignment:
Q  905 caggggtggagccacccccagctagcctgggctag--tccaggctcagctccaa 956  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||| |||||||    
T  26723134 caggggcggagccacccccagctagcctgggctagtttccaggctcggctccaa 26723081  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 905 - 956
Target Start/End: Complemental strand, 41759804 - 41759751
Alignment:
Q  905 caggggtggagccacccccagctagcctggg--ctagtccaggctcagctccaa 956  Q
    |||||| ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  41759804 caggggcggagccacccccagctagcctgggcactagcccaggctcagctccaa 41759751  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 956
Target Start/End: Complemental strand, 35300625 - 35300571
Alignment:
Q  905 caggggtggagccaccccc-agctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  35300625 caggggcggagccaccccccagctagcctgggctagtgcccaggctcagctccaa 35300571  T

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Target: chr6 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 940
Target Start/End: Complemental strand, 9047111 - 9047076
Alignment:
Q  905 caggggtggagccacccccagctagcctgggctagt 940  Q
    |||||| |||||||||||||||||||||||||||||    
T  9047111 caggggcggagccacccccagctagcctgggctagt 9047076  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 905 - 956
Target Start/End: Complemental strand, 10397977 - 10397923
Alignment:
Q  905 caggggtggagccaccccc-agctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  10397977 caggggcggagccaccccccagctagcctgggctagtgcccaggctcagctccaa 10397923  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 956
Target Start/End: Original strand, 9695975 - 9696028
Alignment:
Q  905 caggggtggagccacccccagctagcctgggctagt--ccaggctcagctccaa 956  Q
    |||||| |||| ||||||||||||||||||||||||  |||||||| |||||||    
T  9695975 caggggcggagtcacccccagctagcctgggctagtgcccaggctcggctccaa 9696028  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 905 - 958
Target Start/End: Complemental strand, 28614568 - 28614512
Alignment:
Q  905 caggggtggagccaccccc-agctagcctgggc--tagtccaggctcagctccaatt 958  Q
    ||||||||||||||||||| ||||||| |||||  ||| ||||||||||||||||||    
T  28614568 caggggtggagccaccccccagctagcgtgggcactagcccaggctcagctccaatt 28614512  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 905 - 956
Target Start/End: Complemental strand, 109494 - 109442
Alignment:
Q  905 caggggtggagccacccccagctagcctgggc--tagtccaggctcagctccaa 956  Q
    |||||||||||||||||| ||||||| |||||  ||||||||||||||||||||    
T  109494 caggggtggagccacccc-agctagcttgggcactagtccaggctcagctccaa 109442  T

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