View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8214_high_15 (Length: 351)
Name: NF8214_high_15
Description: NF8214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8214_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 10 - 334
Target Start/End: Complemental strand, 33223778 - 33223454
Alignment:
| Q |
10 |
attattctagaaatcactcacattcaactgttttgtgttgcaaccaaacgattaacactagtaaatattgatgatagcaaatcacttgtgacaaaacaat |
109 |
Q |
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| T |
33223778 |
attattctagaaatcactcacattcaactgttttgtgttgcaactaaacgattaacactagtaaatattgatgatagcaaatcacttgtgacaaaacaat |
33223679 |
T |
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| Q |
110 |
ttatctttaaatgttcacccatgtttatttgagtgtgcagaaagaataagtataaagatcgtctattatgaattccataagatgaaagaattcaatggat |
209 |
Q |
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| T |
33223678 |
ttatctttaaatgttaacccatgtttatttgagtgtgcagaaagaataagtataaagatcgtctattatgaattccataagatgaaagaattcaatggat |
33223579 |
T |
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| Q |
210 |
atcacatgcagataaagaaatttatttccaatagaaaagaatccaaacaactttacttttaagaattgaatggttatcatatagagatttctgtatgatt |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33223578 |
atcacatgcagataaagaaatttatttccaatagaaaagaatccaaacaactttacttttaagaattgaatggttatcatatagagatttctgtatgatt |
33223479 |
T |
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| Q |
310 |
gatcgtatatataagataatagaag |
334 |
Q |
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||||||||||||||||||||||||| |
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| T |
33223478 |
gatcgtatatataagataatagaag |
33223454 |
T |
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