View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8214_high_34 (Length: 214)

Name: NF8214_high_34
Description: NF8214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8214_high_34
NF8214_high_34
[»] chr1 (47 HSPs)
chr1 (13-161)||(23045411-23045559)
chr1 (23-161)||(284330-284468)
chr1 (13-158)||(40783789-40783934)
chr1 (19-159)||(321625-321765)
chr1 (13-166)||(47037984-47038135)
chr1 (19-159)||(24772043-24772183)
chr1 (19-157)||(27211102-27211240)
chr1 (19-158)||(23526240-23526379)
chr1 (19-151)||(46771644-46771776)
chr1 (19-138)||(33082765-33082884)
chr1 (19-143)||(52037260-52037382)
chr1 (19-160)||(1749305-1749446)
chr1 (21-162)||(51064893-51065037)
chr1 (105-160)||(41959076-41959131)
chr1 (105-158)||(3943060-3943113)
chr1 (105-158)||(9588670-9588723)
chr1 (30-107)||(1837978-1838053)
chr1 (17-99)||(7765072-7765154)
chr1 (105-158)||(13984991-13985044)
chr1 (21-110)||(31003926-31004012)
chr1 (29-158)||(40261419-40261549)
chr1 (36-110)||(3657125-3657199)
chr1 (21-110)||(52478016-52478103)
chr1 (117-158)||(44227848-44227889)
chr1 (21-108)||(27143151-27143239)
chr1 (21-99)||(18396754-18396832)
chr1 (117-163)||(41959809-41959855)
chr1 (117-158)||(3943763-3943804)
chr1 (21-90)||(31061594-31061662)
chr1 (33-98)||(40562733-40562797)
chr1 (105-158)||(44228228-44228281)
chr1 (21-159)||(34458863-34459000)
chr1 (92-144)||(40564241-40564293)
chr1 (117-158)||(9589631-9589672)
chr1 (75-110)||(14351954-14351989)
chr1 (105-150)||(1168369-1168414)
chr1 (130-159)||(16120674-16120703)
chr1 (130-166)||(40772006-40772043)
chr1 (130-158)||(6402644-6402672)
chr1 (126-158)||(10845481-10845513)
chr1 (130-158)||(11641067-11641095)
chr1 (127-159)||(13984436-13984468)
chr1 (130-158)||(30701718-30701746)
chr1 (130-158)||(36399332-36399360)
chr1 (130-158)||(36757486-36757514)
chr1 (130-158)||(40771772-40771800)
chr1 (130-158)||(52024260-52024288)
[»] chr6 (35 HSPs)
chr6 (13-158)||(29260192-29260337)
chr6 (19-158)||(1605579-1605718)
chr6 (13-159)||(8626481-8626627)
chr6 (13-151)||(30734615-30734753)
chr6 (19-158)||(13757208-13757347)
chr6 (19-158)||(7761301-7761438)
chr6 (19-158)||(15064832-15064971)
chr6 (19-143)||(31559874-31559998)
chr6 (13-160)||(4129433-4129572)
chr6 (13-158)||(17942443-17942590)
chr6 (19-158)||(8235624-8235763)
chr6 (43-152)||(30734772-30734879)
chr6 (21-107)||(21277574-21277659)
chr6 (105-158)||(19996715-19996768)
chr6 (28-110)||(3798151-3798233)
chr6 (21-158)||(14286989-14287125)
chr6 (26-107)||(11370630-11370711)
chr6 (117-158)||(19996322-19996363)
chr6 (130-166)||(4147923-4147959)
chr6 (130-161)||(25476042-25476073)
chr6 (120-158)||(15064695-15064733)
chr6 (120-158)||(17942682-17942720)
chr6 (73-158)||(1814595-1814680)
chr6 (130-159)||(22055006-22055035)
chr6 (130-163)||(32671811-32671844)
chr6 (67-100)||(33845469-33845502)
chr6 (130-158)||(18668688-18668716)
chr6 (130-158)||(18668922-18668950)
chr6 (130-158)||(19087958-19087986)
chr6 (130-158)||(19088192-19088220)
chr6 (130-158)||(20437017-20437045)
chr6 (130-158)||(24623941-24623969)
chr6 (21-61)||(30235447-30235487)
chr6 (130-158)||(32414913-32414941)
chr6 (130-158)||(32420754-32420782)
[»] chr7 (36 HSPs)
chr7 (19-158)||(10981508-10981647)
chr7 (13-158)||(27813811-27813956)
chr7 (13-156)||(36453256-36453399)
chr7 (19-158)||(40348960-40349099)
chr7 (19-160)||(47110449-47110588)
chr7 (13-160)||(25614485-25614630)
chr7 (26-110)||(3091565-3091649)
chr7 (105-158)||(25060133-25060186)
chr7 (26-110)||(7743542-7743625)
chr7 (19-98)||(27942177-27942256)
chr7 (105-158)||(2911548-2911601)
chr7 (29-100)||(16360442-16360511)
chr7 (21-108)||(16662146-16662231)
chr7 (21-108)||(17636506-17636591)
chr7 (19-100)||(3498892-3498973)
chr7 (21-135)||(37983179-37983289)
chr7 (38-152)||(8379948-8380063)
chr7 (117-152)||(25059456-25059491)
chr7 (130-165)||(41898222-41898257)
chr7 (130-161)||(47156024-47156055)
chr7 (130-164)||(28061509-28061543)
chr7 (130-164)||(46103364-46103398)
chr7 (117-158)||(2910859-2910900)
chr7 (30-67)||(28200298-28200335)
chr7 (130-159)||(36623307-36623336)
chr7 (134-167)||(48602427-48602460)
chr7 (130-158)||(16778505-16778533)
chr7 (130-158)||(20885103-20885131)
chr7 (130-158)||(25566548-25566576)
chr7 (130-158)||(28061749-28061777)
chr7 (130-158)||(36623542-36623570)
chr7 (130-158)||(38852081-38852109)
chr7 (130-158)||(41897988-41898016)
chr7 (130-158)||(42877386-42877414)
chr7 (130-158)||(46103597-46103625)
chr7 (130-158)||(47156261-47156289)
[»] chr4 (45 HSPs)
chr4 (19-158)||(25704651-25704790)
chr4 (13-158)||(24706379-24706524)
chr4 (19-158)||(21310425-21310564)
chr4 (13-158)||(14261044-14261189)
chr4 (19-158)||(12071561-12071700)
chr4 (19-158)||(22321405-22321544)
chr4 (13-158)||(40122617-40122762)
chr4 (19-158)||(34324720-34324860)
chr4 (13-158)||(44568837-44568982)
chr4 (13-163)||(21661667-21661817)
chr4 (13-163)||(21670431-21670581)
chr4 (13-151)||(50767871-50768009)
chr4 (19-161)||(20249151-20249292)
chr4 (19-156)||(31892240-31892373)
chr4 (43-158)||(1988036-1988150)
chr4 (29-161)||(26676714-26676846)
chr4 (21-110)||(20714488-20714577)
chr4 (21-107)||(32543532-32543617)
chr4 (26-158)||(6129093-6129225)
chr4 (21-158)||(19692723-19692860)
chr4 (21-158)||(19703308-19703445)
chr4 (35-98)||(34284171-34284234)
chr4 (21-110)||(48652268-48652356)
chr4 (130-165)||(19433351-19433386)
chr4 (105-143)||(19361662-19361700)
chr4 (21-90)||(18507404-18507472)
chr4 (19-86)||(21064834-21064899)
chr4 (130-162)||(55209808-55209840)
chr4 (130-161)||(2760961-2760992)
chr4 (130-160)||(2760728-2760758)
chr4 (117-151)||(19362189-19362223)
chr4 (120-166)||(20249006-20249052)
chr4 (130-160)||(55209572-55209602)
chr4 (130-158)||(4467520-4467548)
chr4 (120-160)||(12071799-12071839)
chr4 (130-158)||(26169986-26170014)
chr4 (130-158)||(26170221-26170249)
chr4 (130-158)||(29830343-29830371)
chr4 (130-158)||(35381128-35381156)
chr4 (130-158)||(38416650-38416678)
chr4 (130-158)||(38416884-38416912)
chr4 (130-158)||(44232077-44232105)
chr4 (130-158)||(45292066-45292094)
chr4 (130-158)||(47386520-47386548)
chr4 (21-61)||(51777715-51777755)
[»] scaffold1431 (1 HSPs)
scaffold1431 (13-158)||(31-176)
[»] chr8 (43 HSPs)
chr8 (13-158)||(11174355-11174500)
chr8 (13-158)||(40058435-40058580)
chr8 (19-158)||(2540069-2540208)
chr8 (23-158)||(3585451-3585586)
chr8 (13-159)||(43275531-43275675)
chr8 (13-159)||(37345570-37345716)
chr8 (13-158)||(11646457-11646602)
chr8 (13-158)||(7146913-7147058)
chr8 (13-158)||(40918863-40919006)
chr8 (19-151)||(30999661-30999791)
chr8 (13-166)||(36068072-36068225)
chr8 (19-160)||(27034995-27035135)
chr8 (13-160)||(20546421-20546566)
chr8 (26-158)||(28562421-28562554)
chr8 (105-165)||(45278701-45278761)
chr8 (21-100)||(13881094-13881174)
chr8 (105-158)||(8697898-8697951)
chr8 (105-158)||(41307961-41308014)
chr8 (21-110)||(28326797-28326883)
chr8 (21-156)||(35866616-35866751)
chr8 (19-110)||(37510314-37510405)
chr8 (105-159)||(40486453-40486507)
chr8 (105-158)||(10646592-10646645)
chr8 (26-158)||(28567919-28568051)
chr8 (26-158)||(28575512-28575644)
chr8 (26-99)||(10181002-10181074)
chr8 (117-158)||(41305762-41305803)
chr8 (120-164)||(40918725-40918769)
chr8 (21-100)||(39151464-39151542)
chr8 (120-166)||(7147152-7147198)
chr8 (21-108)||(30906828-30906917)
chr8 (130-164)||(32998674-32998708)
chr8 (130-159)||(132016-132045)
chr8 (120-165)||(43275392-43275437)
chr8 (117-158)||(45278013-45278053)
chr8 (130-158)||(616783-616811)
chr8 (130-158)||(617017-617045)
chr8 (130-158)||(623176-623204)
chr8 (130-158)||(623410-623438)
chr8 (126-158)||(5878317-5878349)
chr8 (130-158)||(14237514-14237542)
chr8 (130-158)||(40494618-40494646)
chr8 (130-158)||(42587482-42587510)
[»] chr3 (50 HSPs)
chr3 (13-158)||(13364843-13364988)
chr3 (13-162)||(46694242-46694391)
chr3 (13-161)||(198852-199000)
chr3 (13-158)||(19241800-19241945)
chr3 (13-159)||(36881281-36881425)
chr3 (13-159)||(23088063-23088209)
chr3 (13-158)||(3383076-3383221)
chr3 (19-158)||(29375138-29375277)
chr3 (19-158)||(43750137-43750276)
chr3 (54-151)||(32835129-32835226)
chr3 (37-158)||(13702769-13702890)
chr3 (80-158)||(27707363-27707441)
chr3 (105-158)||(12094582-12094635)
chr3 (21-106)||(19897067-19897152)
chr3 (105-159)||(19911508-19911562)
chr3 (73-158)||(37293437-37293522)
chr3 (26-99)||(37780996-37781069)
chr3 (105-158)||(44277455-44277508)
chr3 (105-158)||(38805245-38805298)
chr3 (73-141)||(48820444-48820512)
chr3 (117-163)||(44276770-44276816)
chr3 (89-158)||(48963156-48963223)
chr3 (21-135)||(54086577-54086690)
chr3 (30-107)||(1455297-1455374)
chr3 (117-158)||(19912174-19912215)
chr3 (13-70)||(27707120-27707177)
chr3 (117-158)||(38806341-38806382)
chr3 (21-148)||(18356007-18356134)
chr3 (130-164)||(19823894-19823928)
chr3 (21-151)||(53559750-53559880)
chr3 (105-158)||(4235751-4235803)
chr3 (117-158)||(12095423-12095464)
chr3 (29-92)||(17755221-17755284)
chr3 (29-92)||(19056541-19056604)
chr3 (30-108)||(44522491-44522567)
chr3 (130-160)||(13499569-13499599)
chr3 (21-99)||(24064283-24064361)
chr3 (13-110)||(26105079-26105176)
chr3 (130-160)||(42761717-42761747)
chr3 (21-99)||(52805166-52805244)
chr3 (26-67)||(6901655-6901696)
chr3 (130-167)||(20765187-20765224)
chr3 (105-149)||(4226716-4226759)
chr3 (130-158)||(6910568-6910596)
chr3 (130-158)||(20765430-20765458)
chr3 (130-158)||(27010474-27010502)
chr3 (130-158)||(27010708-27010736)
chr3 (130-158)||(42490430-42490458)
chr3 (130-158)||(42761483-42761511)
chr3 (132-164)||(44562020-44562052)
[»] chr2 (30 HSPs)
chr2 (13-158)||(39938170-39938315)
chr2 (13-157)||(23366790-23366934)
chr2 (19-158)||(3518908-3519047)
chr2 (13-158)||(1102503-1102648)
chr2 (31-158)||(37673887-37674014)
chr2 (19-158)||(12969877-12970016)
chr2 (13-130)||(1646317-1646432)
chr2 (19-81)||(22388273-22388335)
chr2 (105-158)||(34224378-34224431)
chr2 (21-99)||(14779838-14779914)
chr2 (43-110)||(35179097-35179164)
chr2 (21-110)||(18078104-18078193)
chr2 (21-110)||(19976380-19976468)
chr2 (31-158)||(39562037-39562162)
chr2 (21-148)||(1002870-1002997)
chr2 (21-107)||(32840312-32840401)
chr2 (120-161)||(12969737-12969778)
chr2 (130-165)||(11841586-11841621)
chr2 (130-164)||(5405230-5405264)
chr2 (120-158)||(40756911-40756949)
chr2 (130-159)||(44365391-44365420)
chr2 (130-158)||(2183191-2183219)
chr2 (130-158)||(7608283-7608311)
chr2 (130-166)||(8042014-8042050)
chr2 (130-158)||(8042256-8042284)
chr2 (130-162)||(13125141-13125173)
chr2 (130-158)||(19141066-19141094)
chr2 (130-158)||(19141300-19141328)
chr2 (130-158)||(39358146-39358174)
chr2 (130-162)||(39358401-39358433)
[»] chr5 (30 HSPs)
chr5 (13-161)||(30720624-30720772)
chr5 (19-158)||(12806991-12807130)
chr5 (19-158)||(25773649-25773788)
chr5 (13-158)||(10285189-10285334)
chr5 (13-158)||(40886742-40886887)
chr5 (13-165)||(36561231-36561383)
chr5 (19-158)||(37900762-37900901)
chr5 (19-147)||(7277560-7277688)
chr5 (19-120)||(25683366-25683467)
chr5 (24-158)||(16983258-16983393)
chr5 (21-169)||(734478-734625)
chr5 (21-110)||(30403101-30403191)
chr5 (21-158)||(39070883-39071020)
chr5 (21-164)||(11319553-11319696)
chr5 (33-108)||(23098386-23098461)
chr5 (109-158)||(15305216-15305265)
chr5 (21-98)||(1056422-1056498)
chr5 (130-167)||(8086264-8086301)
chr5 (117-158)||(15304822-15304863)
chr5 (50-158)||(11796451-11796559)
chr5 (21-99)||(16054173-16054249)
chr5 (130-161)||(33387453-33387484)
chr5 (120-158)||(25683229-25683267)
chr5 (130-159)||(978311-978340)
chr5 (130-167)||(40156189-40156226)
chr5 (130-158)||(978077-978105)
chr5 (130-158)||(9502627-9502655)
chr5 (130-158)||(14634157-14634185)
chr5 (132-160)||(24992374-24992402)
chr5 (120-164)||(40886604-40886648)
[»] scaffold0054 (2 HSPs)
scaffold0054 (19-158)||(45454-45593)
scaffold0054 (120-161)||(45692-45733)
[»] scaffold1770 (1 HSPs)
scaffold1770 (13-160)||(168-307)
[»] scaffold0062 (1 HSPs)
scaffold0062 (19-143)||(403-525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (21-108)||(70874-70961)
[»] scaffold0257 (2 HSPs)
scaffold0257 (105-158)||(23467-23520)
scaffold0257 (117-161)||(23872-23916)
[»] scaffold0025 (1 HSPs)
scaffold0025 (19-92)||(65301-65375)
[»] scaffold0022 (1 HSPs)
scaffold0022 (130-160)||(100645-100675)
[»] scaffold0018 (1 HSPs)
scaffold0018 (132-164)||(67764-67796)


Alignment Details
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 23045411 - 23045559
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045411 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 23045510  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045511 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 23045559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 284468 - 284330
Alignment:
Q  23 taaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  284468 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 284369  T
Q  123 tccaaaatggacatgtattttgaaacggagggagtaata 161  Q
    |||||||||||||||||||||||||||||||||||||||    
T  284368 tccaaaatggacatgtattttgaaacggagggagtaata 284330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 40783789 - 40783934
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40783789 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggtta 40783888  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  40783889 gtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 40783934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 321765 - 321625
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  321765 aaaataaaatgaaataataaatgattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 321666  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagtaa 159  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  321665 tttctccaaaatgaacatgtattttgaaacggagggagtaa 321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 47037984 - 47038135
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||| ||||    
T  47037984 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttgatttcttagtta 47038081  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatatttat 166  Q
    || |||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  47038082 gtacaatttctccaaaatggacatgtattttgaaacggatggagtagtatttat 47038135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 24772043 - 24772183
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24772043 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 24772142  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagtaa 159  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  24772143 tttcttcaaaatggacatgtattttgaaacggagggagtaa 24772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 27211102 - 27211240
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||    
T  27211102 aaaatagaataaaataataaatggttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaatttatttggtttcttggttattgcaa 27211201  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagt 157  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27211202 tttctccaaaatggacatgtattttgaaacggagggagt 27211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 23526379 - 23526240
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||    
T  23526379 aaaatagaatgaaataataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttgattactgcaa 23526280  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||| ||||||||||||||| ||| ||||||    
T  23526279 tttctccaaaatgaacatgtattttgaaatggaaggagta 23526240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 46771776 - 46771644
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| |||||    
T  46771776 aaaatagaatgaaaaaataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttaatttcttggttactgcaa 46771677  T
Q  119 tttctccaaaatggacatgtattttgaaacgga 151  Q
    |||||||||||||||||||||||||||||||||    
T  46771676 tttctccaaaatggacatgtattttgaaacgga 46771644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 33082884 - 33082765
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  33082884 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 33082785  T
Q  119 tttctccaaaatggacatgt 138  Q
    |||||||||||| |||||||    
T  33082784 tttctccaaaatagacatgt 33082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 52037260 - 52037382
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||  || ||| ||||||||||| |||||||||||||||| |||| || |||||    
T  52037260 aaaatagaatgaaataataaatggttaagagtattatagaaaacacaca--taattttatcaaaaataataaaatttatttggttttttggataatgcaa 52037357  T
Q  119 tttctccaaaatggacatgtatttt 143  Q
    |||||| ||||||||||||||||||    
T  52037358 tttctctaaaatggacatgtatttt 52037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 1749446 - 1749305
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||| |||||||||||| |||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||| ||  |    
T  1749446 aaaatagaataaaataataaatggttaatgctattatagaaaacacacatataatttcatcaaaaataacaaaatttatttgatttcttgattactgtga 1749347  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagtaat 160  Q
    ||| |   ||||||| ||||||||| |||||||  |||||||    
T  1749346 ttttttttaaatggaaatgtattttaaaacggatcgagtaat 1749305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 51064893 - 51065037
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtatt---atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgca 117  Q
    |||| |||||||||||||| || ||||||||||   |||||||| ||||| | | ||||||||||||| |||| ||||||||| || ||||||  ||| |    
T  51064893 aatataatgaaataataaacgagtaagggtattattatagaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgta 51064992  T
Q  118 atttctccaaaatggacatgtattttgaaacggagggagtaatat 162  Q
    ||||||  |||||||||| ||||| ||||||||||||||||||||    
T  51064993 atttctttaaaatggacaagtattgtgaaacggagggagtaatat 51065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 41959131 - 41959076
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 160  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41959131 cttggttattgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 41959076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 3943113 - 3943060
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3943113 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 3943060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 9588723 - 9588670
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9588723 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 9588670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 1837978 - 1838053
Alignment:
Q  30 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 107  Q
    ||||||||||||  |||||||||||||||||| |||||  || |||||||||||||||||||||||||||| ||||||    
T  1837978 aaataataaatgggtaagggtattatagaaaaaacaca--taatttcatcaaaaataacaaaatttatttgatttctt 1838053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 7765154 - 7765072
Alignment:
Q  17 agaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 99  Q
    |||||| ||||| |||||||||||| ||| ||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||    
T  7765154 agaaaaaaaaattaaataataaatggttatgggtattacggaaaacacacatataatttcaccaaaaataacaaaatttattt 7765072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 13984991 - 13985044
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  13984991 cttggttactgcaatttctccaaaatggacatgtattttgaaacggatggagta 13985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 31003926 - 31004012
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||| ||| |||||||||||| ||||||||||||||||||| | ||||||| |||||| ||||||   |||||||||||| |||||||||    
T  31003926 aatagaattaaataataaatggttaagggtattatagaaaaaatacacatactttcattaaaaat---aaaatttatttgatttcttggt 31004012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 40261419 - 40261549
Alignment:
Q  29 gaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtg-caatttctcca 126  Q
    ||||||||||||| |||| | |||||||||||| | |||||  | ||||||||||| |||||||||||||||| |||||||||  |||  ||||||| ||    
T  40261419 gaaataataaatggttaatgatattatagaaaaaaacacacgcaatttcatcaaaattaacaaaatttatttgatttcttggtatgtgtaaatttct-ca 40261517  T
Q  127 aaatggacatgtattttgaaacggagggagta 158  Q
    |||   ||||||||| ||||||||||||||||    
T  40261518 aaagcaacatgtattgtgaaacggagggagta 40261549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 3657199 - 3657125
Alignment:
Q  36 taaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||||| |||||| |||||||||||| ||| ||| | |||||| ||||||||||||||||||||| |||||||||    
T  3657199 taaatggttaaggttattatagaaaaaacatacaaaatttcattaaaaataacaaaatttatttgatttcttggt 3657125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 52478103 - 52478016
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||| |||||||| ||||||  |||||| |||||||||||| ||||| |   |||||||||||||||||||||||||||| |||||||||    
T  52478103 aatagaatgaaatgataaatttttaaggttattatagaaaaaacacaaaa--tttcatcaaaaataacaaaatttatttgatttcttggt 52478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 44227889 - 44227848
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44227889 aatttctccaaaatggacatgtattttgaaacggagggagta 44227848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 27143151 - 27143239
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttg 108  Q
    |||| ||||||||||||||||||||||  |||||||||||| | | |||  | |||| ||||||||||||||||||||||| |||||||    
T  27143151 aatagaatgaaataataaatgattaagaatattatagaaaaaaactcacggaatttcctcaaaaataacaaaatttatttgatttcttg 27143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 18396832 - 18396754
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 99  Q
    |||| ||||||||||| |||| ||||   ||||||||||||  |||||||| |||||| ||||||||||||||||||||    
T  18396832 aatagaatgaaataatgaatggttaaatatattatagaaaaaccacacataatttcataaaaaataacaaaatttattt 18396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 41959809 - 41959855
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagtaatatt 163  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  41959809 aatttctctaaaatggacatgtattttgaaacggagggagtattatt 41959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 3943763 - 3943804
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  3943763 aatttctctaaaatggacatgtattttgaaacggagggagta 3943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 31061594 - 31061662
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaa 90  Q
    |||| |||||||||||||||| ||| ||||||||| ||||| ||||||||| |||||| |||||||||||    
T  31061594 aatataatgaaataataaatggtta-gggtattatggaaaaaacacacataatttcataaaaaataacaa 31061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 40562733 - 40562797
Alignment:
Q  33 taataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 98  Q
    ||||||||| |||| |||||||||||||||||| | ||| ||| ||||||||||||||||||||||    
T  40562733 taataaatggttaatggtattatagaaaacacatatataattt-atcaaaaataacaaaatttatt 40562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 44228228 - 44228281
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||    
T  44228228 cttggttacagcaatttctccaaaatggacatgtattttgaaatggaggtagta 44228281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 34458863 - 34459000
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    |||| ||||||||||||||| | ||||| |||||||||||  | ||||| | |||||| |||||||  |||||||||||| |||||||||  ||| ||||    
T  34458863 aatagaatgaaataataaattagtaaggttattatagaaa--aaacacagaatttcataaaaaatagaaaaatttatttgatttcttggtatgtgtaatt 34458960  T
Q  121 t-ctccaaaatggacatgtattttgaaacggagggagtaa 159  Q
    | ||  ||||  |||| ||||| ||||||||| |||||||    
T  34458961 tcctaaaaaaacgacaagtattgtgaaacggatggagtaa 34459000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 40564241 - 40564293
Alignment:
Q  92 atttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttg 144  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||| |||||||    
T  40564241 atttatttggtttcttggttactgcgatttttccaaaatggacatatattttg 40564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 9589631 - 9589672
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  9589631 aatttctctaaaatagacatgtattttgaaacggagggagta 9589672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 14351954 - 14351989
Alignment:
Q  75 tcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||||||||||||||||||||||||| |||||||||    
T  14351954 tcatcaaaaataacaaaatttatttgttttcttggt 14351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 1168414 - 1168369
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacgg 150  Q
    |||||||| |||||||||| |||||  |||||||||||||||||||    
T  1168414 cttggttactgcaatttcttcaaaaacgacatgtattttgaaacgg 1168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 16120674 - 16120703
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaa 159  Q
    ||||||||||||||||||||||||||||||    
T  16120674 tggacatgtattttgaaacggagggagtaa 16120703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 40772006 - 40772043
Alignment:
Q  130 tggacatgtattttgaaacggagggagta-atatttat 166  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  40772006 tggacatgtattttgaaacggagggagtatatatttat 40772043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 6402644 - 6402672
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  6402644 tggacatgtattttgaaacggagggagta 6402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 10845513 - 10845481
Alignment:
Q  126 aaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||| |||||    
T  10845513 aaaatggacatgtattttgaaacggagtgagta 10845481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 11641095 - 11641067
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  11641095 tggacatgtattttgaaacggagggagta 11641067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 13984468 - 13984436
Alignment:
Q  127 aaatggacatgtattttgaaacggagggagtaa 159  Q
    ||||||| |||||||||||||||||||||||||    
T  13984468 aaatggatatgtattttgaaacggagggagtaa 13984436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 30701746 - 30701718
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  30701746 tggacatgtattttgaaacggagggagta 30701718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 36399332 - 36399360
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  36399332 tggacatgtattttgaaacggagggagta 36399360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 36757514 - 36757486
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  36757514 tggacatgtattttgaaacggagggagta 36757486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 40771800 - 40771772
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  40771800 tggacatgtattttgaaacggagggagta 40771772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 52024260 - 52024288
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  52024260 tggacatgtattttgaaacggagggagta 52024288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 29260337 - 29260192
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29260337 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 29260238  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29260237 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 29260192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 1605718 - 1605579
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1605718 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 1605619  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1605618 tttctccaaaatggacatgtattttgaaacggagggagta 1605579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 8626627 - 8626481
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8626627 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 8626528  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 159  Q
     |||||||||| |||||||||||||||||||||||||||||||||||    
T  8626527 atgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 8626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 30734615 - 30734753
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30734615 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 30734714  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacgga 151  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30734715 gtgcaatttctccaaaatggacatgtattttgaaacgga 30734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 13757347 - 13757208
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13757347 aaaataaaatgaaataataattgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgtaa 13757248  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  13757247 tttctccaaaatggacatgtattttgaaacggagagagta 13757208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 7761438 - 7761301
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7761438 aaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttagtgcaa 7761341  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7761340 tttctccaaaatggacatgtattttgaaacggagggagta 7761301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 15064832 - 15064971
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||| |||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||    
T  15064832 aaaatataatcaaataataaatggttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttggttgctgcaa 15064931  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  15064932 tttctctaaaatggacatgtattttgaaacggagggagta 15064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 31559874 - 31559998
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  31559874 aaaaaaaaatgaaataataaatgattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaatttatttgattttttggttaatgcaa 31559973  T
Q  119 tttctccaaaatggacatgtatttt 143  Q
    |||||||||||||||||||||||||    
T  31559974 tttctccaaaatggacatgtatttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 4129572 - 4129433
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        |||||    
T  4129572 gagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggtta 4129481  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 160  Q
     ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  4129480 ctgcaatttctccaaagtggatatgtattttgaaacggagggagtaat 4129433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 17942590 - 17942443
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaat--aacaaaatttatttggtttcttggt 110  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||  || ||||  ||||||||||||||||    
T  17942590 gagaaaaaaataaaatgaaataataaatggttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaaaaaatatttggtttcttggt 17942491  T
Q  111 tagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    || ||||||||||| |||||||||||||||||||||||| ||||||||    
T  17942490 tactgcaatttctcaaaaatggacatgtattttgaaacgaagggagta 17942443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 8235763 - 8235624
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||| |||||||||||| |||||    
T  8235763 aaaatagaatgaaataataaatgattaagggtattatagaaaacacacacataatatcataaaaaataacaaattttatttcgtttcttggttactgcaa 8235664  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||| ||||||| ||||||||||| |||  |||||||||    
T  8235663 tttcttcaaaatgtacatgtattttaaaatagagggagta 8235624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 30734772 - 30734879
Alignment:
Q  43 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 142  Q
    |||||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||| || |||| |||||||||| ||||||||||||||||||    
T  30734772 ttaagggtattatagaaaacacaca--taatttcatcaaaaataacaaaatttatttgatttttttgttactgcaatttcttcaaaatggacatgtattt 30734869  T
Q  143 tgaaacggag 152  Q
    ||||||||||    
T  30734870 tgaaacggag 30734879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 21277574 - 21277659
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 107  Q
    |||| |||||| || ||||| |||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| ||||||    
T  21277574 aatagaatgaagtactaaataattaagggtattatagaaaa-acacataaattttcataaaaaataacaaaatttatttgatttctt 21277659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 19996715 - 19996768
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  19996715 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 19996768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 3798233 - 3798151
Alignment:
Q  28 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    ||||||||||||||  ||||||| |||||||||| ||||| |||  ||||| ||||||||||||||||||||| ||| |||||    
T  3798233 tgaaataataaatgtgtaagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaatttatttgattttttggt 3798151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 14287125 - 14286989
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    ||||||||||||||||||| |  |||||||||||||||||| |  |||| | |||||| ||||||||||||||||||||| ||| ||||   ||| ||||    
T  14287125 aataaaatgaaataataaaggggtaagggtattatagaaaa-aagcacagaatttcataaaaaataacaaaatttatttgatttattggcatgtgtaatt 14287027  T
Q  121 tctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |   |||||   ||| ||||| ||||||||||||||||    
T  14287026 ttctcaaaaactacaagtattgtgaaacggagggagta 14286989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 11370630 - 11370711
Alignment:
Q  26 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 107  Q
    |||| ||||||||||| ||||| |||||||| |||| |||||   | | |||||||||||||||||||||||||| ||||||    
T  11370630 aatggaataataaatggttaagagtattataaaaaaaacacaatgaatatcatcaaaaataacaaaatttatttgatttctt 11370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 19996363 - 19996322
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19996363 aatttctctaaaatggacatgtattttgaaacggagggagta 19996322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 4147959 - 4147923
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatatttat 166  Q
    ||||||||||||||||||||||||||||| |||||||    
T  4147959 tggacatgtattttgaaacggagggagtattatttat 4147923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 161
Target Start/End: Original strand, 25476042 - 25476073
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaata 161  Q
    ||||||||||||||||||||||||||||||||    
T  25476042 tggacatgtattttgaaacggagggagtaata 25476073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 15064733 - 15064695
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  15064733 ttctccaaaatggacaagtattatgaaacggagggagta 15064695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 17942682 - 17942720
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  17942682 ttctccaaaatggacaagtattatgaaacggagggagta 17942720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 1814680 - 1814595
Alignment:
Q  73 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||| |||||||| ||||||| |  ||| |||||   |||||  |||| ||||| ||||||||| ||||||    
T  1814680 tttcatcaaaaataacaaagtttatttgatttcttgatatgtgtaattttctcaaaagcgacaagtattgtgaaacggatggagta 1814595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 22055006 - 22055035
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaa 159  Q
    ||||||||||||||||||||||||||||||    
T  22055006 tggacatgtattttgaaacggagggagtaa 22055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 32671844 - 32671811
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatatt 163  Q
    ||||||||||||||||||||||||||||| ||||    
T  32671844 tggacatgtattttgaaacggagggagtattatt 32671811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 33845469 - 33845502
Alignment:
Q  67 acatattttcatcaaaaataacaaaatttatttg 100  Q
    ||||| ||||||||||||||||||||||||||||    
T  33845469 acataatttcatcaaaaataacaaaatttatttg 33845502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 18668716 - 18668688
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  18668716 tggacatgtattttgaaacggagggagta 18668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 18668922 - 18668950
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  18668922 tggacatgtattttgaaacggagggagta 18668950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 19087986 - 19087958
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  19087986 tggacatgtattttgaaacggagggagta 19087958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 19088192 - 19088220
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  19088192 tggacatgtattttgaaacggagggagta 19088220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 20437045 - 20437017
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  20437045 tggacatgtattttgaaacggagggagta 20437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 24623969 - 24623941
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  24623969 tggacatgtattttgaaacggagggagta 24623941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 30235447 - 30235487
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaa 61  Q
    |||| |||||||||||||||||||||| ||| |||||||||    
T  30235447 aatagaatgaaataataaatgattaagagtaatatagaaaa 30235487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 32414913 - 32414941
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  32414913 tggacatgtattttgaaacggagggagta 32414941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 32420754 - 32420782
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  32420754 tggacatgtattttgaaacggagggagta 32420782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 10981647 - 10981508
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981647 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 10981548  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10981547 tttctccaaaatggacatgtattttgaaacggagggagta 10981508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 27813956 - 27813811
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27813956 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaataacaaaatttatttggtttcttggtta 27813857  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27813856 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 27813811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 36453256 - 36453399
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36453256 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaataataaaatttatttggtttcttggtta 36453355  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  36453356 gtgcaatttctccaaaatggacatgtattttgaaacggagggag 36453399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 40349099 - 40348960
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40349099 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 40349000  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  40348999 tttctccaaaatggacatgtattttgaaacggaaggagta 40348960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 47110588 - 47110449
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47110588 aaaataaaataaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttattttgtttcttggttagtgcaa 47110491  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagtaat 160  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  47110490 tttctccaaaatggacatgtattttgaaatggagggagtaat 47110449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 25614485 - 25614630
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  25614485 gagaaaaaaataaaatgaaataataaatgattaagggtatttcagaaaacac--acatattttcatcaaaaataacaaaatttatttggttttttggtta 25614582  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 160  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25614583 gtgcaatttctccaaaatggacatgtattttgaaacggaaggagtaat 25614630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 3091649 - 3091565
Alignment:
Q  26 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||||||||||||||| ||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||| ||| |||||    
T  3091649 aatgaaataataaatggttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaatttatttgattttttggt 3091565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 25060133 - 25060186
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25060133 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 25060186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 7743542 - 7743625
Alignment:
Q  26 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    ||||||||||||||| ||||| |||||||||||||  | ||||||| |||||||||||||||||||||||||||| | |||||||    
T  7743542 aatgaaataataaataattaacggtattatagaaagaa-acacataatttcatcaaaaataacaaaatttatttgatatcttggt 7743625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 27942177 - 27942256
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 98  Q
    |||||| |||||||||||||||| |||| |||||||||||||| ||||||||| | |||| |||||||| ||||||||||    
T  27942177 aaaatagaatgaaataataaatggttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaatttatt 27942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 2911548 - 2911601
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  2911548 cttggttactgcaatttctccaaaatggacatgtattttgaaatggagggagta 2911601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 16360511 - 16360442
Alignment:
Q  29 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 100  Q
    ||||||||||||| ||||||||||||||||||  | ||||| | ||||||||||||||||||||||||||||    
T  16360511 gaaataataaatggttaagggtattatagaaa--aaacacagaatttcatcaaaaataacaaaatttatttg 16360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 16662231 - 16662146
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 108  Q
    |||| ||| |||||||||||| |||||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||  |||||||    
T  16662231 aatataataaaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 16662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 17636591 - 17636506
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 108  Q
    |||| ||| |||||||||||| |||||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||  |||||||    
T  17636591 aatataataaaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 17636506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 3498892 - 3498973
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 100  Q
    ||||||||||||||||||||||| ||||  ||||||||||||| | ||| | | |||||| ||||||||||||||| |||||    
T  3498892 aaaataaaatgaaataataaatggttaaaagtattatagaaaagatacaaaaaatttcataaaaaataacaaaattaatttg 3498973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 37983289 - 37983179
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    |||| |||||||||||||||| |||| ||||||||| |||||| | |     |||||||||||||||||||||||||||| ||||||| |  ||| ||||    
T  37983289 aatataatgaaataataaatggttaaaggtattataaaaaacataaaa----tttcatcaaaaataacaaaatttatttgatttcttgatatgtgtaatt 37983194  T
Q  121 tctccaaaatggaca 135  Q
    ||  |||||||||||    
T  37983193 tcctcaaaatggaca 37983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 8380063 - 8379948
Alignment:
Q  38 aatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacat 136  Q
    |||||||| ||||||||||||||| | |||| | |  ||||| || |||||||||||||||||| |||||| ||   || ||||||  |||||| ||||     
T  8380063 aatgattaggggtattatagaaaaaagcacaaaaaagttcattaacaataacaaaatttatttgatttcttagtatatgtaatttcctcaaaatcgacaa 8379964  T
Q  137 gtattttgaaacggag 152  Q
    ||||| ||||||||||    
T  8379963 gtattgtgaaacggag 8379948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 152
Target Start/End: Complemental strand, 25059491 - 25059456
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggag 152  Q
    |||||||| |||||||||||||||||||||||||||    
T  25059491 aatttctctaaaatggacatgtattttgaaacggag 25059456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 165
Target Start/End: Original strand, 41898222 - 41898257
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatattta 165  Q
    ||||||||||||||||||||||||||||| ||||||    
T  41898222 tggacatgtattttgaaacggagggagtattattta 41898257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 161
Target Start/End: Complemental strand, 47156055 - 47156024
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaata 161  Q
    ||||||||||||||||||||||||||||||||    
T  47156055 tggacatgtattttgaaacggagggagtaata 47156024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 28061543 - 28061509
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatattt 164  Q
    ||||||||||||||||||||||||||||| |||||    
T  28061543 tggacatgtattttgaaacggagggagtattattt 28061509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 46103398 - 46103364
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatattt 164  Q
    ||||||||||||||||||||||||||||| |||||    
T  46103398 tggacatgtattttgaaacggagggagtactattt 46103364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 2910900 - 2910859
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||  ||||| |||||||||||||||||||||||||||    
T  2910900 aatttctttaaaatagacatgtattttgaaacggagggagta 2910859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 28200335 - 28200298
Alignment:
Q  30 aaataataaatgattaagggtattatagaaaacacaca 67  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  28200335 aaataataaatgattaaggatattatagaaaaaacaca 28200298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 36623336 - 36623307
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaa 159  Q
    ||||||||||||||||||||||||||||||    
T  36623336 tggacatgtattttgaaacggagggagtaa 36623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 48602460 - 48602427
Alignment:
Q  134 catgtattttgaaacggagggagtaatatttata 167  Q
    ||||||||||||||||||||||||| ||||||||    
T  48602460 catgtattttgaaacggagggagtagtatttata 48602427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 16778533 - 16778505
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  16778533 tggacatgtattttgaaacggagggagta 16778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 20885131 - 20885103
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  20885131 tggacatgtattttgaaacggagggagta 20885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 25566576 - 25566548
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  25566576 tggacatgtattttgaaacggagggagta 25566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 28061749 - 28061777
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  28061749 tggacatgtattttgaaacggagggagta 28061777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 36623542 - 36623570
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  36623542 tggacatgtattttgaaacggagggagta 36623570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 38852081 - 38852109
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  38852081 tggacatgtattttgaaacggagggagta 38852109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 41898016 - 41897988
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  41898016 tggacatgtattttgaaacggagggagta 41897988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 42877414 - 42877386
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  42877414 tggacatgtattttgaaacggagggagta 42877386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 46103597 - 46103625
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  46103597 tggacatgtattttgaaacggagggagta 46103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 47156261 - 47156289
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  47156261 tggacatgtattttgaaacggagggagta 47156289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 25704790 - 25704651
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25704790 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 25704691  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25704690 tttctccaaaatggacatgtattttgaaacggagggagta 25704651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 24706379 - 24706524
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24706379 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 24706478  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  24706479 gtgcaatttctccaaaatggacatgtattttgaaacggatggagta 24706524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 21310564 - 21310425
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310564 aaaaaaaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 21310465  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21310464 tttctccaaaatggacatgtattttgaaacggagggagta 21310425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 14261189 - 14261044
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14261189 gagaaaaaaataaaatgaaataataaattattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttggtta 14261090  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14261089 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 14261044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 12071700 - 12071561
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  12071700 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttattggttagtgcaa 12071601  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12071600 tttctccaaaatggacatgtattttgaaacggagggagta 12071561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 22321405 - 22321544
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22321405 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaa 22321504  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  22321505 tttctccaaaatggacatgtattttgaaacggaaggagta 22321544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 40122617 - 40122762
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40122617 gagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggttttttggtta 40122716  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  40122717 ctgcaatttctccaaaatggacatgtattttgaaacggagggagta 40122762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 34324720 - 34324860
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaattt-atttggtttcttggttagtgca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  34324720 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttaatttagtttcttggttagtgca 34324819  T
Q  118 atttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34324820 atttctccaaaatggacatgtattttgaaacggagggagta 34324860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 44568982 - 44568837
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  44568982 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggttttttggtta 44568883  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  44568882 gtgcaatttcttcaaaatggacatgtattttgaaacggaaggagta 44568837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 21661667 - 21661817
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21661667 gagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaatttatttggtttcttggtta 21661766  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatatt 163  Q
     |||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  21661767 ctgcaatttctccaaaatggacatgtattttgaaagggagggagtattatt 21661817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 21670431 - 21670581
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21670431 gagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaatttatttggtttcttggtta 21670530  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatatt 163  Q
     |||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  21670531 ctgcaatttctccaaaatggacatgtattttgaaagggagggagtattatt 21670581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 50768009 - 50767871
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  50768009 gagaaaaaaataaaatgaaataataaattattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttgatta 50767910  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacgga 151  Q
    |||||||||||| |||||| | |||||||||||||||||    
T  50767909 gtgcaatttctctaaaatgaatatgtattttgaaacgga 50767871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 20249151 - 20249292
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||| |||||||||||| |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||    
T  20249151 aaaatagaataaaataataaatggttaagggtattatagaaa-cacacacataatttcttcaaaaataacaaaatttatttggtttcttggttaatacaa 20249249  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagtaata 161  Q
    ||| |||||||||||||||||||||||||||||| ||||||||    
T  20249250 tttatccaaaatggacatgtattttgaaacggagagagtaata 20249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 31892373 - 31892240
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| |||||||||||||||| | || ||||||||||||||||||    || ||||||||||||||| |||||||||||| ||||||||||| |||||    
T  31892373 aaaatagaatgaaataataaatggtcaaaggtattatagaaaacaca----taatttcatcaaaaataataaaatttatttgatttcttggttactgcaa 31892278  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggag 156  Q
    |||||  |||||| ||||||||||||| ||||||||||    
T  31892277 tttctttaaaatgaacatgtattttgatacggagggag 31892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 158
Target Start/End: Complemental strand, 1988150 - 1988036
Alignment:
Q  43 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 142  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||| |||| |||||||||||| |||| ||||| |||||    
T  1988150 ttaagggtattatagaaaacacatacataatttcatcaaaaataataaaatttatttgatttcttagttactgcaatttctcc-aaatagacatatattt 1988052  T
Q  143 tgaaacggagggagta 158  Q
    | |||| || ||||||    
T  1988051 taaaacagatggagta 1988036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 26676714 - 26676846
Alignment:
Q  29 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 128  Q
    |||||||||||||| |||||||||||||||||| ||||  | | |||||| |||||| |||| ||||||||| || ||||||  ||| ||||||| ||||    
T  26676714 gaaataataaatgagtaagggtattatagaaaaaacacgaagaatttcataaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaa 26676813  T
Q  129 atggacatgtattttgaaacggagggagtaata 161  Q
    ||||| | ||||| |||||||||| ||||||||    
T  26676814 atggataagtattgtgaaacggagagagtaata 26676846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 20714488 - 20714577
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaa-cacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||| |||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  20714488 aatataatgaaataataaatggttaagg-tattatagaaaaacacacacatagtttcatcaaaaataacaaaatttatttgatttattggt 20714577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 32543617 - 32543532
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 107  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| | | ||||||||||| |||||||| ||||||||||||||    
T  32543617 aataaaatgaaataataaatgattaagggtattata-aaaaaacacaaagaatttcatcaaaattaacaaaaattatttggtttctt 32543532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 6129093 - 6129225
Alignment:
Q  26 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctcc 125  Q
    |||||||||||||||||||||||||||| ||||||| | ||| | | ||| |||||||||||||||||||||||| ||||||| |  ||| ||||||  |    
T  6129093 aatgaaataataaatgattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaatttatttgatttcttgatatgtgtaatttcatc 6129192  T
Q  126 aaaatggacatgtattttgaaacggagggagta 158  Q
    |||   || | ||||| ||||||||||||||||    
T  6129193 aaaggcgataagtattatgaaacggagggagta 6129225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 19692860 - 19692723
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||  ||||    
T  19692860 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19692761  T
Q  121 tctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||| ||||||||| |  |||| |||||| |||| ||||    
T  19692760 tcttcaaaatggagaattattgtgaaacagaggaagta 19692723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 19703445 - 19703308
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||  ||||    
T  19703445 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19703346  T
Q  121 tctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||| ||||||||| |  |||| |||||| |||| ||||    
T  19703345 tcttcaaaatggagaattattgtgaaacagaggaagta 19703308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 34284171 - 34284234
Alignment:
Q  35 ataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 98  Q
    |||||| |||||||||||||||||||| | ||| ||| ||||||||||| ||||||||||||||    
T  34284171 ataaataattaagggtattatagaaaaaatacaaatagtttcatcaaaagtaacaaaatttatt 34284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 48652356 - 48652268
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||| ||||||||||||||||| |||  || ||| |||||| | ||| | | |||||||||||||||||||||||||||| |||||||||    
T  48652356 aatataatgaaataataaatgagtaaatgtgttaaagaaaa-atacaaagaatttcatcaaaaataacaaaatttatttgatttcttggt 48652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 165
Target Start/End: Complemental strand, 19433386 - 19433351
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatattta 165  Q
    ||||||||||||||||||||||||||||||||||||    
T  19433386 tggacatgtattttgaaacggagggagtaatattta 19433351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 105 - 143
Target Start/End: Complemental strand, 19361700 - 19361662
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtatttt 143  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19361700 cttggttactgcaatttctccaaaatggacatgtatttt 19361662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 18507404 - 18507472
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaa 90  Q
    |||| |||||||||||||||  | |||| |||||||||||| ||||||| | ||||||||||||||||||    
T  18507404 aatataatgaaataataaattgtcaagg-tattatagaaaaaacacacaaaatttcatcaaaaataacaa 18507472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 21064899 - 21064834
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 86  Q
    |||||| |||||||||||||||  ||||| |||||||  |||| ||||||||| ||||||||||||||    
T  21064899 aaaatagaatgaaataataaatagttaagagtattat--aaaaaacacacataatttcatcaaaaata 21064834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 55209808 - 55209840
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatat 162  Q
    |||||||||||||||||||||||||||||||||    
T  55209808 tggacatgtattttgaaacggagggagtaatat 55209840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 161
Target Start/End: Original strand, 2760961 - 2760992
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaata 161  Q
    ||||||||||||||||||||||||||||||||    
T  2760961 tggacatgtattttgaaacggagggagtaata 2760992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Complemental strand, 2760758 - 2760728
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaat 160  Q
    |||||||||||||||||||||||||||||||    
T  2760758 tggacatgtattttgaaacggagggagtaat 2760728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 19362189 - 19362223
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacgga 151  Q
    |||||||| ||||||||||||||||||||||||||    
T  19362189 aatttctctaaaatggacatgtattttgaaacgga 19362223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 20249052 - 20249006
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagtaatatttat 166  Q
    |||||||||||||||| ||||| |||||||||| ||||| |||||||    
T  20249052 ttctccaaaatggacaagtattatgaaacggagtgagtattatttat 20249006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Complemental strand, 55209602 - 55209572
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaat 160  Q
    |||||||||||||||||||||||||||||||    
T  55209602 tggacatgtattttgaaacggagggagtaat 55209572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 4467548 - 4467520
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  4467548 tggacatgtattttgaaacggagggagta 4467520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 12071799 - 12071839
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagtaat 160  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  12071799 ttctctaaaatggacaagtattatgaaacggagggagtaat 12071839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 26170014 - 26169986
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  26170014 tggacatgtattttgaaacggagggagta 26169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 26170221 - 26170249
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  26170221 tggacatgtattttgaaacggagggagta 26170249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 29830371 - 29830343
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  29830371 tggacatgtattttgaaacggagggagta 29830343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 35381128 - 35381156
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  35381128 tggacatgtattttgaaacggagggagta 35381156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 38416678 - 38416650
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  38416678 tggacatgtattttgaaacggagggagta 38416650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 38416884 - 38416912
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  38416884 tggacatgtattttgaaacggagggagta 38416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 44232105 - 44232077
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  44232105 tggacatgtattttgaaacggagggagta 44232077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 45292066 - 45292094
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  45292066 tggacatgtattttgaaacggagggagta 45292094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 47386520 - 47386548
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  47386520 tggacatgtattttgaaacggagggagta 47386548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 51777755 - 51777715
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaa 61  Q
    ||||| ||||||||||||||| ||||| |||||||||||||    
T  51777755 aataacatgaaataataaatggttaagagtattatagaaaa 51777715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 31 - 176
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 130  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  131 gtgcaatttctccaaaatggacatgtattttgaaacggagagagta 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 11174355 - 11174500
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11174355 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 11174454  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  11174455 gtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 11174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 40058435 - 40058580
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40058435 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 40058534  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  40058535 gtgcaatttctccgaaatggacatgtattttgaaacggagggagta 40058580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 2540069 - 2540208
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2540069 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 2540168  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  2540169 tttctccaaaatggacatgtattttgaaacggaggaagta 2540208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 3585586 - 3585451
Alignment:
Q  23 taaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585586 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 3585487  T
Q  123 tccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||    
T  3585486 tccaaaatggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 43275531 - 43275675
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  43275531 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggtta 43275628  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43275629 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 43275675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 37345716 - 37345570
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  37345716 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataacaaaatttatttggtttcttggttg 37345617  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 159  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  37345616 gtgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 37345570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 11646457 - 11646602
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11646457 gagaaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtta 11646556  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  11646557 gtgcaatttctccaaaatggacatgtattttgaaacgaagggagta 11646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 7147058 - 7146913
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7147058 gagaaaaaaataaaatgaaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 7146959  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
     |||||||||| ||||||||||||||||||||||||||| ||||||    
T  7146958 ctgcaatttcttcaaaatggacatgtattttgaaacggaaggagta 7146913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 40918863 - 40919006
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||||||||||||||||||||||    
T  40918863 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tgttttcataaaaaataacaaaatttatttggtttcttggtta 40918960  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  40918961 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 40919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 30999661 - 30999791
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30999661 aaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 30999758  T
Q  119 tttctccaaaatggacatgtattttgaaacgga 151  Q
    |||||||||||| ||||||||||||||||||||    
T  30999759 tttctccaaaattgacatgtattttgaaacgga 30999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 36068225 - 36068072
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||    
T  36068225 gagaaaaaagtaaaatgaaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaataacaaaatttatttggttttttggtta 36068126  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatatttat 166  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  36068125 gtacaattcctccaaaatggacatgtattttgaaacggagggagtaatttttat 36068072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 27035135 - 27034995
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||| |||| ||||||||||||||||||| |||||    
T  27035135 aaaatagaatgaaataataaatggttaagggtattatagaaa-cacagacataatttcatcaaaaataaaaaaaattatttggtttcttggttactgcaa 27035037  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagtaat 160  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27035036 tttctccaaaatggacatgtattttgaaacggagggagtaat 27034995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 13 - 160
Target Start/End: Original strand, 20546421 - 20546566
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||| |||||||||||||||  |||||||||| ||| ||||||||||  || |||||||||||||||||||||||||||  ||||||| ||     
T  20546421 gagaaaaaaatataatgaaataataaattgttaagggtatcatataaaacacaca--taatttcatcaaaaataacaaaatttatttaatttcttgattg 20546518  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 160  Q
     |||||||||| |||||||||||| |||||||||| ||||||||||||    
T  20546519 ttgcaatttcttcaaaatggacatatattttgaaatggagggagtaat 20546566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 28562554 - 28562421
Alignment:
Q  26 aatgaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctc 124  Q
    |||||||| |||||||| |||||||||||||||||| | |||| | | ||||||||||||| |||| ||||||||| || ||||||  ||| |||||||     
T  28562554 aatgaaatcataaatgagtaagggtattatagaaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttctt 28562455  T
Q  125 caaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||| ||||||||||||||||| ||||    
T  28562454 caaaatggacaagtattttgaaacggaggaagta 28562421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 45278701 - 45278761
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatattta 165  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45278701 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaatattta 45278761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 13881094 - 13881174
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaatttatttg 100  Q
    |||| |||||||||||||||||||||||||||||||| |||| || |||| | ||||||||||||||||||||||||||||    
T  13881094 aatataatgaaataataaatgattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaatttatttg 13881174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 8697898 - 8697951
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8697898 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 8697951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 41307961 - 41308014
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41307961 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 41308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 28326797 - 28326883
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||| |||||||||||||||  ||||| ||||||| |||||   ||||||| |||||||||||||||||||||||||||| |||||||||    
T  28326797 aatagaatgaaataataaatagttaagagtattattgaaaa---acacataatttcatcaaaaataacaaaatttatttgatttcttggt 28326883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 35866751 - 35866616
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    |||| ||| |||||||||||| ||||||||||||||||||| ||||| | | |||||| ||||||||||| |||||| |  |||||||||   |  ||||    
T  35866751 aatagaataaaataataaatgtttaagggtattatagaaaaaacacaaagaatttcatgaaaaataacaacatttatctaatttcttggtatatataatt 35866652  T
Q  121 tctccaaaatggacatgtattttgaaacggagggag 156  Q
    |||  |||||||||| ||||| ||||||||| ||||    
T  35866651 tctttaaaatggacaagtattgtgaaacggaaggag 35866616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 37510405 - 37510314
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||||||||||||||| |||||||||||||||||||| ||||| | | | | | ||| || |||||||||||||||||||| ||||||||||    
T  37510405 aaaataaaatgaaatattaaatgattaagggtattattgaaaaaatagaaagaattttattaaaaataacaaaatttatttagtttcttggt 37510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 40486453 - 40486507
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 159  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  40486453 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 40486507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 10646645 - 10646592
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  10646645 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggaagta 10646592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 28568051 - 28567919
Alignment:
Q  26 aatgaaataataaatgattaagggtattatagaaaac-acacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctc 124  Q
    |||||||||||||||||  | |||||||||||||||  ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||| |||||||     
T  28568051 aatgaaataataaatgagca-gggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttctt 28567953  T
Q  125 caaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||| ||||||||||||||||| ||||    
T  28567952 caaaatggacaagtattttgaaacggaggaagta 28567919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 28575644 - 28575512
Alignment:
Q  26 aatgaaataataaatgattaagggtattatagaaaac-acacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctc 124  Q
    |||||||||||||||||  | |||||||||||||||  ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||| |||||||     
T  28575644 aatgaaataataaatgagca-gggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttctt 28575546  T
Q  125 caaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||| ||||||||||||||||| ||||    
T  28575545 caaaatggacaagtattttgaaacggaggaagta 28575512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 10181002 - 10181074
Alignment:
Q  26 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 99  Q
    |||||||||||||||| |||| ||||||||| |||| ||| || || ||| || ||||||||||||||||||||    
T  10181002 aatgaaataataaatggttaacggtattata-aaaaaacaaacgtaattttataaaaaataacaaaatttattt 10181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 41305803 - 41305762
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| ||||||||||||||||||||||||||| |||||    
T  41305803 aatttctctaaaatggacatgtattttgaaacggagagagta 41305762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 40918769 - 40918725
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagtaatattt 164  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||    
T  40918769 ttctctaaaatggacaagtattatgaaacggagggagtaatattt 40918725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 39151542 - 39151464
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 100  Q
    |||| ||| |||||||||||||| ||   |||||||||||| | | ||||| ||||||||||||||||||| ||||||||    
T  39151542 aatagaataaaataataaatgataaattatattatagaaaaaa-atacataatttcatcaaaaataacaaagtttatttg 39151464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 7147152 - 7147198
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagtaatatttat 166  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||    
T  7147152 ttctctaaaatggacaagtattatgaaacggagggagtagtatttat 7147198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 30906828 - 30906917
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacac--acatattttcatcaaaaataacaaaatttatttggtttcttg 108  Q
    |||| ||| |||||||||||| |||||| | | |||||||| | ||  ||| | |||||| ||||||||||||||||||||| |||||||    
T  30906828 aatagaattaaataataaatggttaaggttttcatagaaaaaaaactcacaaaatttcataaaaaataacaaaatttatttgatttcttg 30906917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 32998674 - 32998708
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatattt 164  Q
    |||||||||||||||||||| ||||||||||||||    
T  32998674 tggacatgtattttgaaacgaagggagtaatattt 32998708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 159
Target Start/End: Complemental strand, 132045 - 132016
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaa 159  Q
    ||||||||||||||||||||||||||||||    
T  132045 tggacatgtattttgaaacggagggagtaa 132016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 43275437 - 43275392
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagtaatattta 165  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||    
T  43275437 ttctctaaaatggacaagtattatgaaacggagggagtattattta 43275392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 45278053 - 45278013
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  45278053 aatttctctaaaatggacatgtattttgaaac-gagggagta 45278013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 616811 - 616783
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  616811 tggacatgtattttgaaacggagggagta 616783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 617017 - 617045
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  617017 tggacatgtattttgaaacggagggagta 617045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 623204 - 623176
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  623204 tggacatgtattttgaaacggagggagta 623176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 623410 - 623438
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  623410 tggacatgtattttgaaacggagggagta 623438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 5878349 - 5878317
Alignment:
Q  126 aaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||| |||||||||||||||    
T  5878349 aaaatggacatgtatttggaaacggagggagta 5878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 14237514 - 14237542
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  14237514 tggacatgtattttgaaacggagggagta 14237542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 40494618 - 40494646
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  40494618 tggacatgtattttgaaacggagggagta 40494646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 42587482 - 42587510
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  42587482 tggacatgtattttgaaacggagggagta 42587510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 3e-72; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 13364988 - 13364843
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13364988 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 13364889  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  13364888 gtgcaatttctccaaaatgaacatgtattttgaaacggagggagta 13364843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 46694242 - 46694391
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  46694242 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgatta 46694341  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatat 162  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46694342 gtgcaatttctccaaaaaggacatgtattttgaaacggagggagtaatat 46694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 199000 - 198852
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  199000 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtca 198901  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  198900 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 198852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 19241800 - 19241945
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19241800 gagaaaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtta 19241899  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  19241900 gtgcaatttcaccaaaatggacatgtattttgaaacggagggagta 19241945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 36881425 - 36881281
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  36881425 gagaaaaaaataaaatgaaataataaataattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttggtttcttggtta 36881328  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36881327 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 36881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 23088063 - 23088209
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23088063 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 23088162  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 159  Q
    ||||||||||| |||||| ||||| ||||||||||| ||||||||||    
T  23088163 gtgcaatttcttcaaaatagacatatattttgaaacagagggagtaa 23088209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 3383221 - 3383076
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3383221 gagaaaaaaataaaatgaaataataaatgtttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 3383122  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
     ||||||||||||||||||||||| |||||||||||||| ||||||    
T  3383121 ctgcaatttctccaaaatggacatatattttgaaacggaaggagta 3383076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 29375277 - 29375138
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  29375277 aaaaaaaaaagaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaatttatttggtttcttggttactgcaa 29375178  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29375177 tttctccaaaatggacatgtattttgaaacggagggagta 29375138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 43750276 - 43750137
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||    
T  43750276 aaaatagaatgaaataataaatggttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaatttatttggtttcttggttactccaa 43750177  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  43750176 tttctccaaaatggacatgtattttgaaacgaagggagta 43750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 32835129 - 32835226
Alignment:
Q  54 atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacgga 151  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32835129 atagaaaacacacacataatttcatcaaaaataacaaaatttatttgttttcttggttattgcaatttctccaaaatggacatgtattttgaaacgga 32835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 37 - 158
Target Start/End: Complemental strand, 13702890 - 13702769
Alignment:
Q  37 aaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacat 136  Q
    ||||| |||| |||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | |||    
T  13702890 aaatggttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaatttatttggtttcttggttactgcaatttctccaaaataggcat 13702791  T
Q  137 gtattttgaaacggagggagta 158  Q
    ||||||| ||| ||| ||||||    
T  13702790 gtattttaaaatggatggagta 13702769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 27707363 - 27707441
Alignment:
Q  80 aaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  27707363 aaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtatttcgaaacggagggagta 27707441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 12094635 - 12094582
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12094635 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 12094582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 19897067 - 19897152
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttct 106  Q
    |||| |||||||||||||| || |||||||||||||||||| ||||| | | |||||| ||||||||||||||||||||| |||||    
T  19897067 aatagaatgaaataataaaagagtaagggtattatagaaaaaacacaaagaatttcataaaaaataacaaaatttatttgatttct 19897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 19911562 - 19911508
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 159  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  19911562 cttggttactgcaatttctccaaaatgaacatgtattttgaaacggagggagtaa 19911508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 158
Target Start/End: Complemental strand, 37293522 - 37293437
Alignment:
Q  73 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||| |||| ||||||||| || ||||||  ||| ||||||| ||||||||||| ||||| ||||||||||||||||    
T  37293522 tttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaatggacaagtattgtgaaacggagggagta 37293437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 37781069 - 37780996
Alignment:
Q  26 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 99  Q
    |||||||||||||||| ||||  ||||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  37781069 aatgaaataataaatggttaatagtattatagaaaaaacacacagaatttcatcaaaaataataaaatttattt 37780996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 44277455 - 44277508
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  44277455 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 44277508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 38805298 - 38805245
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  38805298 cttggttactgcaatttctctaaaatggacatgtattttaaaacggagggagta 38805245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 48820444 - 48820512
Alignment:
Q  73 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 141  Q
    |||||||||||||||||||||||||||||||| |||| ||  | ||||||||||||||  |||||||||    
T  48820444 tttcatcaaaaataacaaaatttatttggtttattggataccgtaatttctccaaaataaacatgtatt 48820512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 44276816 - 44276770
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagtaatatt 163  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  44276816 aatttctctaaaatggacatgtattttgaaacggagagagtaatatt 44276770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 48963223 - 48963156
Alignment:
Q  89 aaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| ||||||| ||| ||||||||  ||||||||||||||| || ||||||||||||||||||||||||    
T  48963223 aaaaattatttgatttattggttag--caatttctccaaaatagatatgtattttgaaacggagggagta 48963156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 54086690 - 54086577
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    |||| ||||||||||||| ||| |||||||||||||||||| | ||| | | ||||||||| ||| |||| ||||||||| || |||||   ||| ||||    
T  54086690 aatagaatgaaataataa-tgagtaagggtattatagaaaaaatacaaagaatttcatcaataatgacaacatttatttgattccttggcatgtgtaatt 54086592  T
Q  121 tctccaaaatggaca 135  Q
    ||| |||||||||||    
T  54086591 tcttcaaaatggaca 54086577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 1455297 - 1455374
Alignment:
Q  30 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 107  Q
    |||||||||||| | ||| | ||||||||| | ||||| ||| ||| |||||||||||||||||||||||| ||||||    
T  1455297 aaataataaatggtgaagagaattatagaagaaacacaaataattttatcaaaaataacaaaatttatttgatttctt 1455374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 19912174 - 19912215
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19912174 aatttctctaaaatggacatgtattttgaaacggagggagta 19912215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 27707120 - 27707177
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacat 70  Q
    ||||| ||||||||| ||||||||||||| |||||| |||||||||||||||| ||||    
T  27707120 gagaaaaaaataaaaagaaataataaatggttaaggatattatagaaaacacatacat 27707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 38806341 - 38806382
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  38806341 aatttctctaaaatggacatgtattttgaaacggagggagta 38806382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 18356007 - 18356134
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    |||| |||||||| |||||||| |||||||||||||||||| ||||| | | ||||| ||||| | |||| || |||||  || |||||   ||| ||||    
T  18356007 aatagaatgaaatgataaatgagtaagggtattatagaaaaaacacaaagaatttcaccaaaactgacaacatgtatttaattccttggcatgtgtaatt 18356106  T
Q  121 tctccaaaatggacatgtattttgaaac 148  Q
    | | ||||||||| ||||||| ||||||    
T  18356107 ttttcaaaatggatatgtattgtgaaac 18356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 19823928 - 19823894
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatattt 164  Q
    |||||||||||||||||||||||||||||||||||    
T  19823928 tggacatgtattttgaaacggagggagtaatattt 19823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 53559750 - 53559880
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    ||||||||||||||||||| |  ||||| |||  || | || ||||| | | |||||||||||||||||| ||||||||| ||||||| |  ||| ||||    
T  53559750 aataaaatgaaataataaacgggtaaggatatcgtaaataaaacacagagaatttcatcaaaaataacaacatttatttgttttcttgatatgtgtaatt 53559849  T
Q  121 tctccaaaatggacatgtattttgaaacgga 151  Q
    ||| |||||   ||| ||||| |||||||||    
T  53559850 tcttcaaaagcaacaagtattgtgaaacgga 53559880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 4235803 - 4235751
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||  |||||||||||||||||| || |||||    
T  4235803 cttggttagtgcaatttctccaaaa-cgacatgtattttgaaacgaagtgagta 4235751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 12095423 - 12095464
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  12095423 aatttctctaaaatggacatatattttgaaacggagggagta 12095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 17755284 - 17755221
Alignment:
Q  29 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaa 92  Q
    |||||||||||||||||| | |||||||||||| ||||| |||  ||||| |||||||| ||||    
T  17755284 gaaataataaatgattaaagatattatagaaaaaacacaaataaattcataaaaaataaaaaaa 17755221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 19056604 - 19056541
Alignment:
Q  29 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaa 92  Q
    |||||||||||||||||| | |||||||||||| ||||| |||  ||||| |||||||| ||||    
T  19056604 gaaataataaatgattaaagatattatagaaaaaacacaaataaattcataaaaaataaaaaaa 19056541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 44522567 - 44522491
Alignment:
Q  30 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 108  Q
    |||||||||||| ||||  ||||||||||||| |||||  |  |||||| |||||||| |||||||||||| |||||||    
T  44522567 aaataataaatggttaaaagtattatagaaaaaacaca--tgatttcataaaaaataataaaatttatttgatttcttg 44522491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Original strand, 13499569 - 13499599
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaat 160  Q
    |||||||||||||||||||||||||||||||    
T  13499569 tggacatgtattttgaaacggagggagtaat 13499599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 24064361 - 24064283
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 99  Q
    |||| ||| ||||||||||||  |||||||||||||||||| |||||   | ||| || ||| ||||||||||||||||    
T  24064361 aatagaataaaataataaatgggtaagggtattatagaaaaaacacagtgaattttataaaatataacaaaatttattt 24064283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 26105176 - 26105079
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattat-agaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    ||||| |||||| |||||||||||||||| ||||||||||| | | |||||||| | | |   |||| ||||||||||||||||||||| ||| |||||    
T  26105176 gagaaaaaaatataatgaaataataaatggttaagggtattgtaaaaaaacaca-aaaaaaaatcattaaaaataacaaaatttatttgatttattggt 26105079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Original strand, 42761717 - 42761747
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaat 160  Q
    |||||||||||||||||||||||||||||||    
T  42761717 tggacatgtattttgaaacggagggagtaat 42761747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 52805166 - 52805244
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 99  Q
    |||| ||| ||||||||||||  |||| ||||||||||||| |  || | | ||||||||||||| |||||||||||||    
T  52805166 aatataataaaataataaatgtgtaagagtattatagaaaaaatgcaaacaatttcatcaaaaatgacaaaatttattt 52805244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 6901696 - 6901655
Alignment:
Q  26 aatgaaataataaatgattaagggtattatagaaaacacaca 67  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  6901696 aatgaaataataaatgagtaagggtattagagaaaaaacaca 6901655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 20765224 - 20765187
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatatttata 167  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  20765224 tggacatgtattttaaaacggagggagtattatttata 20765187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 4226759 - 4226716
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacg 149  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||    
T  4226759 cttggttactgcaatttctccaaaa-cgacatgtattttgaaacg 4226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 6910568 - 6910596
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  6910568 tggacatgtattttgaaacggagggagta 6910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 20765430 - 20765458
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  20765430 tggacatgtattttgaaacggagggagta 20765458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 27010502 - 27010474
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  27010502 tggacatgtattttgaaacggagggagta 27010474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 27010708 - 27010736
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  27010708 tggacatgtattttgaaacggagggagta 27010736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 42490430 - 42490458
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  42490430 tggacatgtattttgaaacggagggagta 42490458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 42761511 - 42761483
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  42761511 tggacatgtattttgaaacggagggagta 42761483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 44562020 - 44562052
Alignment:
Q  132 gacatgtattttgaaacggagggagtaatattt 164  Q
    ||||||||||||||| |||||||||||||||||    
T  44562020 gacatgtattttgaatcggagggagtaatattt 44562052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 39938315 - 39938170
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938315 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 39938216  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  39938215 gtgcaatttctccaaaatggtcatgtattttgaaacggagggagta 39938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 23366934 - 23366790
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23366934 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggtta 23366835  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagt 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23366834 gtgcaatttctccaaaatggacatgtattttgaaacggagggagt 23366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 3519047 - 3518908
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3519047 aaaataaaatgaaataataaattattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 3518948  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3518947 tttctccaaaatggacatgtattttgaaacggagggagta 3518908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 1102648 - 1102503
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1102648 gagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 1102549  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  1102548 ctgcaatttctccaaaatggacatgtattttgaaacggagggagta 1102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 37673887 - 37674014
Alignment:
Q  31 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaat 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37673887 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaat 37673986  T
Q  131 ggacatgtattttgaaacggagggagta 158  Q
    | ||||||||||||||||||||||||||    
T  37673987 gaacatgtattttgaaacggagggagta 37674014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 12969877 - 12970016
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12969877 aaaatagaataaaataataaatggttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 12969976  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12969977 tttctccaaaatggacatgtattttgaaacggagggagta 12970016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 1646432 - 1646317
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||     
T  1646432 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttg 1646335  T
Q  113 gtgcaatttctccaaaat 130  Q
     |||||||||||||||||    
T  1646334 ctgcaatttctccaaaat 1646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 22388273 - 22388335
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22388273 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 34224378 - 34224431
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34224378 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 14779914 - 14779838
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 99  Q
    |||| ||||||||||||||||| ||||  |||||||||||| ||||| ||| ||||||||||||||| |||||||||||    
T  14779914 aatataatgaaataataaatgagtaag--tattatagaaaaaacacaaataatttcatcaaaaataaaaaaatttattt 14779838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 35179097 - 35179164
Alignment:
Q  43 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||||| |||||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||||    
T  35179097 ttaaggttattatagaaaaaacacacaaaatttcatcaaaaataacaaaatttatttcatttcttggt 35179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 18078193 - 18078104
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||| |||||| ||||||||| | ||| |||||||||||||  |||| | |  ||||||||||||||||||||||||||| ||| |||||    
T  18078193 aatagaatgaattaataaatggtcaagagtattatagaaaatccacaaaaaaattcatcaaaaataacaaaatttatttgattttttggt 18078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 19976468 - 19976380
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    |||| ||| |||||||||||   |||||||||||||||||| | ||||||| ||| ||||||| || ||||||||||||| |||||||||    
T  19976468 aatataataaaataataaataggtaagggtattatagaaaaaa-acacataattttatcaaaagtaccaaaatttatttgatttcttggt 19976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 39562037 - 39562162
Alignment:
Q  31 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaat 130  Q
    ||||||||||| ||||||||||||  ||||| ||| | ||| |||| ||||||||||||||||||||||| ||| ||| |  ||| ||||||   ||||     
T  39562037 aataataaatggttaagggtatta--gaaaaaacaaaaataatttcttcaaaaataacaaaatttatttgattttttgatatgtgtaatttccttaaaag 39562134  T
Q  131 ggacatgtattttgaaacggagggagta 158  Q
     |||| ||||  ||||||||||||||||    
T  39562135 cgacaagtatcatgaaacggagggagta 39562162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 1002870 - 1002997
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    |||| ||||||||||||||||| ||| | |||| | ||||| ||| |   | ||||||||||||||| |||||||||||| |||||| ||  ||| |||     
T  1002870 aatagaatgaaataataaatgagtaatgttattgtcgaaaaaacaaaaggaatttcatcaaaaataataaaatttatttgatttcttagtatgtgtaata 1002969  T
Q  121 tctccaaaatggacatgtattttgaaac 148  Q
    ||  |||||  |||||||||||||||||    
T  1002970 tcctcaaaagcgacatgtattttgaaac 1002997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 32840312 - 32840401
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaa---acacacacatattttcatcaaaaataacaaaatttatttggtttctt 107  Q
    |||| |||||||||||||||   ||| |||||||||||||   | | ||||| | |||||||||||||||||||||||||||| ||||||    
T  32840312 aatagaatgaaataataaatcgataatggtattatagaaagaaaaaaacacagaatttcatcaaaaataacaaaatttatttgatttctt 32840401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 12969778 - 12969737
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagtaata 161  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  12969778 ttctccaaaatggacaagtattatgaaacggagggagtaata 12969737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 165
Target Start/End: Complemental strand, 11841621 - 11841586
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatattta 165  Q
    |||||||||||||||||||||||||||||| |||||    
T  11841621 tggacatgtattttgaaacggagggagtaacattta 11841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 5405230 - 5405264
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatattt 164  Q
    ||||||||||||||||||||||||||||| |||||    
T  5405230 tggacatgtattttgaaacggagggagtattattt 5405264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 40756949 - 40756911
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40756949 ttctccaaaatggacaagtattatgaaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 44365391 - 44365420
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaa 159  Q
    ||||||||||||||||||||||||||||||    
T  44365391 tggacatgtattttgaaacggagggagtaa 44365420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 2183191 - 2183219
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  2183191 tggacatgtattttgaaacggagggagta 2183219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 7608283 - 7608311
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  7608283 tggacatgtattttgaaacggagggagta 7608311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 8042050 - 8042014
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatatttat 166  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  8042050 tggacatatattttgaaacggagggagtagtatttat 8042014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 8042256 - 8042284
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  8042256 tggacatgtattttgaaacggagggagta 8042284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 13125173 - 13125141
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatat 162  Q
    |||||||||||||||||||||| ||||||||||    
T  13125173 tggacatgtattttgaaacggatggagtaatat 13125141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 19141094 - 19141066
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  19141094 tggacatgtattttgaaacggagggagta 19141066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Original strand, 19141300 - 19141328
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  19141300 tggacatgtattttgaaacggagggagta 19141328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 39358174 - 39358146
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  39358174 tggacatgtattttgaaacggagggagta 39358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 39358401 - 39358433
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatat 162  Q
    |||||||||||||||||| ||||||||||||||    
T  39358401 tggacatgtattttgaaatggagggagtaatat 39358433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 30720624 - 30720772
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720624 gagaaaaaaataaaatgaaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 30720723  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720724 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaata 30720772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 12806991 - 12807130
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12806991 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaa 12807090  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12807091 tttctccaaaatggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 25773788 - 25773649
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25773788 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 25773689  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25773688 tttctccaaaatggacatgtattttgaaacggagggagta 25773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 10285189 - 10285334
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10285189 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttcttggtta 10285288  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
     ||||||||||||||||| ||||| |||||||||||||||||||||    
T  10285289 atgcaatttctccaaaatagacatctattttgaaacggagggagta 10285334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 40886742 - 40886887
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  40886742 gagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaataacaaaatttattcgatttcttggtta 40886841  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  40886842 gtgcaatttctccaaaatgaacatgtattttgaaacggatggagta 40886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 36561231 - 36561383
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  36561231 gagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgatta 36561330  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatattta 165  Q
     |||||||| || |||||||||||||||||||||||||| |||||||||||||    
T  36561331 ctgcaatttttctaaaatggacatgtattttgaaacggatggagtaatattta 36561383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 37900762 - 37900901
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||| |||||    
T  37900762 aaaatagaatgaaataataaatggttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaatttatttagtttcttggttactgcaa 37900861  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  37900862 tttctccaaaatggatgtgtattttgaaacggagggagta 37900901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 7277560 - 7277688
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| | |||    
T  7277560 aaaatataatgaaataataaatggttaaaggtattatagaaaacacacacataatttgatcaaaaataacaaaatttatttggtttattggttactccaa 7277659  T
Q  119 tttctccaaaatggacatgtattttgaaa 147  Q
    |||||||||||| ||||||||||||||||    
T  7277660 tttctccaaaatagacatgtattttgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 25683366 - 25683467
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||    
T  25683366 aaaatagaataaaataataaatggttaagggtattatagaaaacacacacataattttatcaaaaataacaaaatttatttggtttcttggttattgcaa 25683465  T
Q  119 tt 120  Q
    ||    
T  25683466 tt 25683467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 16983393 - 16983258
Alignment:
Q  24 aaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat--ttatttggtttcttggttagtgcaattt 121  Q
    ||||| ||||||||| || ||||||||||| ||||||| ||||| ||  |||||||||||| || ||||   ||||||||||||||||||| ||||||||    
T  16983393 aaaataaaataataa-tggttaagggtattgtagaaaaaacacatatcatttcatcaaaaaaaaaaaaaaaattatttggtttcttggttactgcaattt 16983295  T
Q  122 ctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||||||||||||||||| |||||||||    
T  16983294 ctccaaaatggacatgtattttgaaacagagggagta 16983258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 734478 - 734625
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||| | | ||||||||| ||| |||||||||||||| ||  |||||  | | ||||    
T  734478 aatagaatgaaataataaatgagtaagggtattatagaaaa-acacaaagaatttcatcaataatgacaaaatttatttgattctttggtatgagtaatt 734576  T
Q  121 tctccaaaatggacatgtattttgaaacggagggagtaatatttatacc 169  Q
    ||| ||||||||||| ||||| ||||||||||||| || ||||||||||    
T  734577 tcttcaaaatggacaagtattgtgaaacggagggaatattatttatacc 734625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 30403101 - 30403191
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacaca-cacatattttcatcaaaaataacaaaatttatttggtttcttggt 110  Q
    ||||||||||||||| ||||||||||| ||||||||||||| | | |||| | ||||||||||||||||||||||||||||||||||||||    
T  30403101 aataaaatgaaataacaaatgattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaatttatttggtttcttggt 30403191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 39071020 - 39070883
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacac-acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaat 119  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||| ||| | ||||||||||||| |||| ||||||||| || |||  |  ||| |||    
T  39071020 aatagaatgaaataataaatgagtaagggtattatagaaaaaacacaacaga-tttcatcaaaaatgacaacatttatttgattccttaatatgtgtaat 39070922  T
Q  120 ttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| ||||||| ||| ||||| ||||||||||||||||    
T  39070921 ttcttcaaaatgaacaagtattgtgaaacggagggagta 39070883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 21 - 164
Target Start/End: Complemental strand, 11319696 - 11319553
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 120  Q
    |||| ||||||||||||||||| |||||||||||||||||| | ||| | | |||||| |||||| |||| ||||||||| ||  || ||  ||| ||||    
T  11319696 aatagaatgaaataataaatgagtaagggtattatagaaaaaaaacaaagaatttcataaaaaattacaacatttatttgattcattagtatgtgtaatt 11319597  T
Q  121 tctccaaaatggacatgtattttgaaacggagggagtaatattt 164  Q
    ||| |||||||||||  |||| ||||||||||| |||| |||||    
T  11319596 tcttcaaaatggacaaatattgtgaaacggaggaagtattattt 11319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 23098386 - 23098461
Alignment:
Q  33 taataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 108  Q
    ||||||||| ||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||| ||||||||    
T  23098386 taataaatggttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaatttatttagtttcttg 23098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 15305216 - 15305265
Alignment:
Q  109 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15305216 gttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 15305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 1056422 - 1056498
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 98  Q
    |||| |||||||||||||||||| ||  ||||||||||||| ||||| | | |||||| |||||||||||||||||||    
T  1056422 aatataatgaaataataaatgatcaatagtattatagaaaa-acacaaagaatttcattaaaaataacaaaatttatt 1056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 8086264 - 8086301
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatatttata 167  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  8086264 tggacatgtattttgaaacggagggagtattatttata 8086301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 15304863 - 15304822
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  15304863 aatttctctaaaatggacatgtattttaaaacggagggagta 15304822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 11796559 - 11796451
Alignment:
Q  50 tattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacg 149  Q
    |||||||||| | ||||| | | |||||||||||||||||||||| ||||  |||||||||   || ||||||| |||||  |||| ||| | ||||| |    
T  11796559 tattatagaacaaacacatagaatttcatcaaaaataacaaaattaatttaatttcttggtatctgtaatttcttcaaaaatgacaagtagtgtgaaaag 11796460  T
Q  150 gagggagta 158  Q
    |||||||||    
T  11796459 gagggagta 11796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 16054249 - 16054173
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 99  Q
    |||| ||| |||||||||||| | |||| |||||||||||| ||||| |   |||||| ||||||||||||||||||||    
T  16054249 aatagaataaaataataaatggtcaaggatattatagaaaaaacacaaaa--tttcataaaaaataacaaaatttattt 16054173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 161
Target Start/End: Original strand, 33387453 - 33387484
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaata 161  Q
    ||||||||||||||||||||||||||||||||    
T  33387453 tggacatgtattttgaaacggagggagtaata 33387484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 25683267 - 25683229
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  25683267 ttctccaaaatggacaagtattatgaaacggagggagta 25683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 159
Target Start/End: Original strand, 978311 - 978340
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaa 159  Q
    ||||||||||||||||||||||||||||||    
T  978311 tggacatgtattttgaaacggagggagtaa 978340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 40156226 - 40156189
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaatatttata 167  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  40156226 tggatatgtattttgaaacggagggagtagtatttata 40156189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 978105 - 978077
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  978105 tggacatgtattttgaaacggagggagta 978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 9502655 - 9502627
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  9502655 tggacatgtattttgaaacggagggagta 9502627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 14634185 - 14634157
Alignment:
Q  130 tggacatgtattttgaaacggagggagta 158  Q
    |||||||||||||||||||||||||||||    
T  14634185 tggacatgtattttgaaacggagggagta 14634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 160
Target Start/End: Original strand, 24992374 - 24992402
Alignment:
Q  132 gacatgtattttgaaacggagggagtaat 160  Q
    |||||||||||||||||||||||||||||    
T  24992374 gacatgtattttgaaacggagggagtaat 24992402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 40886648 - 40886604
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagtaatattt 164  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||    
T  40886648 ttctctaaaatggacaagtattatgaaacggagggagtagtattt 40886604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 112; Significance: 8e-57; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 45593 - 45454
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  45593 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttggtgcaa 45494  T
Q  119 tttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  45493 tttctccaaaatgaacatgtattttgaaacggagggagta 45454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 45692 - 45733
Alignment:
Q  120 ttctccaaaatggacatgtattttgaaacggagggagtaata 161  Q
    ||||| |||||||||| ||||| |||||||||||||||||||    
T  45692 ttctctaaaatggacaagtattatgaaacggagggagtaata 45733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 307 - 168
Alignment:
Q  13 gagaagaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 112  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        |||||    
T  307 gagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggtta 216  T
Q  113 gtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 160  Q
     ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  215 ctgcaatttctccaaagtggatatgtattttgaaacggagggagtaat 168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 403 - 525
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 118  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||  || ||| |||||||||||||||||||||||| ||| ||| ||| |||||    
T  403 aaaatagaatgaaataataaatgattaagggtattataaaaaacacaca--taattttatcaaaaataacaaaatttatttgattttttgattactgcaa 500  T
Q  119 tttctccaaaatggacatgtatttt 143  Q
    |||| |||||||| |||||||||||    
T  501 tttcgccaaaatgaacatgtatttt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 70961 - 70874
Alignment:
Q  21 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 108  Q
    |||| |||||||||||||||| |||||||| ||| |||||| ||||||| | |||||||||||||||||||||||||||| |||||||    
T  70961 aatagaatgaaataataaatggttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaatttatttgatttcttg 70874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 23520 - 23467
Alignment:
Q  105 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23520 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 23872 - 23916
Alignment:
Q  117 aatttctccaaaatggacatgtattttgaaacggagggagtaata 161  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  23872 aatttctctaaaatggacatgtattttgaaacggatggagtaata 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 65301 - 65375
Alignment:
Q  19 aaaataaaatgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaa 92  Q
    |||||| |||||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||    
T  65301 aaaatagaatgaaataataaatggttaagggtattatagaaaaaaacacatataatttcatcaaaaataataaaa 65375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 160
Target Start/End: Complemental strand, 100675 - 100645
Alignment:
Q  130 tggacatgtattttgaaacggagggagtaat 160  Q
    |||||||||||||||||||||||||||||||    
T  100675 tggacatgtattttgaaacggagggagtaat 100645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 67796 - 67764
Alignment:
Q  132 gacatgtattttgaaacggagggagtaatattt 164  Q
    |||||||||||||||||||| ||||||||||||    
T  67796 gacatgtattttgaaacggatggagtaatattt 67764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University