View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8214_low_31 (Length: 251)
Name: NF8214_low_31
Description: NF8214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8214_low_31 |
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Alignment Details
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 54606347 - 54606544
Alignment:
| Q |
4 |
gtgagaagaaaagaaagaagttacaagtagattagagttgaagtcaaaccagaatataaaaggttcaatgtttgagatacaggatgctttttcattgttt |
103 |
Q |
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| T |
54606347 |
gtgagaagaaaagaaagaagttacaagtagattagagttgaagtcaaaccataatataaaaggttcaatgtttgagatacaggatgccttttcgttgctt |
54606446 |
T |
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| Q |
104 |
tgcgagacaattcatgtatgcaatgattaacagttttaaacaagaaatgtggatttccatttcttttcttgggaaccaaaggaaatttggataatgct |
201 |
Q |
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| T |
54606447 |
tgtgagacaattcacgtatgcaatgattaacagttttaaacaagaaatgtggatttccatttcttttcttcggaaccaaaggaaatttggataatgct |
54606544 |
T |
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