View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8214_low_44 (Length: 205)

Name: NF8214_low_44
Description: NF8214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8214_low_44
NF8214_low_44
[»] chr1 (30 HSPs)
chr1 (4-205)||(44822068-44822269)
chr1 (14-205)||(24723408-24723599)
chr1 (11-152)||(7051976-7052117)
chr1 (11-93)||(51324420-51324502)
chr1 (120-205)||(22823265-22823350)
chr1 (1-93)||(7320638-7320730)
chr1 (26-81)||(19676639-19676694)
chr1 (1-79)||(22350646-22350724)
chr1 (157-205)||(22350582-22350630)
chr1 (26-81)||(16058383-16058437)
chr1 (1-63)||(13302847-13302909)
chr1 (46-85)||(8276079-8276118)
chr1 (26-81)||(21046118-21046173)
chr1 (46-85)||(38056762-38056801)
chr1 (26-81)||(42912977-42913032)
chr1 (1-60)||(45755468-45755527)
chr1 (155-205)||(20708149-20708199)
chr1 (44-81)||(20633721-20633758)
chr1 (46-85)||(4595935-4595974)
chr1 (1-67)||(13989703-13989770)
chr1 (1-67)||(14237699-14237766)
chr1 (1-67)||(21474342-21474409)
chr1 (1-67)||(23592988-23593055)
chr1 (1-67)||(41373311-41373378)
chr1 (1-60)||(42697732-42697791)
chr1 (168-205)||(7052115-7052152)
chr1 (157-205)||(21188126-21188172)
chr1 (138-174)||(22823264-22823300)
chr1 (157-205)||(39061232-39061280)
chr1 (4-67)||(51083115-51083179)
[»] chr2 (35 HSPs)
chr2 (6-205)||(24884274-24884473)
chr2 (11-205)||(1383597-1383791)
chr2 (11-174)||(357716-357879)
chr2 (1-205)||(22501773-22501978)
chr2 (1-205)||(22509707-22509912)
chr2 (111-205)||(25584347-25584442)
chr2 (1-79)||(25142133-25142211)
chr2 (1-85)||(3539760-3539844)
chr2 (1-79)||(18388234-18388312)
chr2 (15-81)||(24516114-24516180)
chr2 (1-74)||(22259974-22260046)
chr2 (157-205)||(18388328-18388376)
chr2 (26-81)||(5031198-5031253)
chr2 (26-81)||(9975857-9975912)
chr2 (26-81)||(17307414-17307469)
chr2 (1-79)||(19358820-19358899)
chr2 (26-81)||(22251517-22251572)
chr2 (26-81)||(24780909-24780964)
chr2 (1-71)||(27852605-27852675)
chr2 (26-81)||(19201269-19201324)
chr2 (26-81)||(27484546-27484601)
chr2 (26-81)||(40912248-40912303)
chr2 (15-81)||(36841192-36841258)
chr2 (157-205)||(20006063-20006109)
chr2 (1-60)||(5986125-5986184)
chr2 (1-67)||(18809780-18809847)
chr2 (1-67)||(23711271-23711338)
chr2 (26-81)||(24436576-24436631)
chr2 (1-67)||(28577942-28578009)
chr2 (1-67)||(32038755-32038822)
chr2 (26-81)||(37270627-37270682)
chr2 (1-58)||(22690585-22690643)
chr2 (1-58)||(9785489-9785546)
chr2 (157-205)||(45535839-45535885)
chr2 (1-69)||(18390259-18390326)
[»] scaffold0230 (2 HSPs)
scaffold0230 (11-205)||(6739-6933)
scaffold0230 (1-56)||(14798-14854)
[»] chr5 (15 HSPs)
chr5 (1-169)||(17876044-17876211)
chr5 (11-205)||(31456764-31456958)
chr5 (47-201)||(30138064-30138218)
chr5 (1-205)||(36508678-36508882)
chr5 (120-205)||(17875970-17876055)
chr5 (1-79)||(21405672-21405751)
chr5 (26-81)||(7484930-7484985)
chr5 (7-77)||(31251941-31252011)
chr5 (15-81)||(19921566-19921632)
chr5 (6-75)||(21617978-21618047)
chr5 (26-81)||(21300113-21300168)
chr5 (43-81)||(31622053-31622091)
chr5 (1-58)||(39245982-39246040)
chr5 (48-81)||(20566482-20566515)
chr5 (2-38)||(20469222-20469258)
[»] chr7 (47 HSPs)
chr7 (47-205)||(14274136-14274294)
chr7 (11-136)||(47974874-47974999)
chr7 (50-152)||(708523-708625)
chr7 (1-93)||(15095681-15095773)
chr7 (1-93)||(15140129-15140221)
chr7 (123-205)||(12754721-12754804)
chr7 (1-79)||(13698683-13698761)
chr7 (7-86)||(8135287-8135366)
chr7 (1-77)||(12557853-12557929)
chr7 (1-69)||(14218940-14219008)
chr7 (1-69)||(35771486-35771554)
chr7 (26-81)||(20620214-20620269)
chr7 (15-81)||(12127221-12127287)
chr7 (7-85)||(13132371-13132449)
chr7 (2-69)||(4071759-4071826)
chr7 (26-81)||(8851228-8851283)
chr7 (26-81)||(10277255-10277310)
chr7 (1-79)||(11054642-11054721)
chr7 (26-81)||(12322999-12323054)
chr7 (26-81)||(12465329-12465384)
chr7 (26-81)||(13147541-13147596)
chr7 (2-69)||(15289044-15289111)
chr7 (7-77)||(41284963-41285033)
chr7 (11-64)||(12754666-12754719)
chr7 (156-205)||(21661168-21661217)
chr7 (44-92)||(33002078-33002126)
chr7 (1-85)||(48807370-48807454)
chr7 (26-81)||(14180467-14180522)
chr7 (7-78)||(15623950-15624021)
chr7 (26-81)||(20214075-20214130)
chr7 (26-81)||(32433658-32433713)
chr7 (11-58)||(36685199-36685246)
chr7 (26-81)||(46386157-46386212)
chr7 (158-205)||(47974983-47975030)
chr7 (28-81)||(12372202-12372255)
chr7 (51-92)||(17070384-17070425)
chr7 (1-67)||(457160-457227)
chr7 (26-81)||(11067396-11067451)
chr7 (1-67)||(13870183-13870250)
chr7 (1-67)||(15375971-15376038)
chr7 (1-67)||(16460079-16460146)
chr7 (1-67)||(20384381-20384448)
chr7 (166-205)||(37539361-37539400)
chr7 (1-67)||(41523757-41523824)
chr7 (1-67)||(41526219-41526286)
chr7 (1-58)||(18628412-18628470)
chr7 (157-201)||(33060356-33060398)
[»] scaffold0040 (1 HSPs)
scaffold0040 (11-205)||(106105-106300)
[»] chr4 (23 HSPs)
chr4 (11-205)||(14549563-14549758)
chr4 (11-205)||(19434613-19434798)
chr4 (130-205)||(45314202-45314276)
chr4 (1-77)||(9924085-9924161)
chr4 (26-81)||(6633606-6633661)
chr4 (1-79)||(9870489-9870568)
chr4 (26-81)||(16998453-16998508)
chr4 (26-81)||(25091581-25091636)
chr4 (26-81)||(46001600-46001655)
chr4 (26-81)||(53630543-53630598)
chr4 (155-205)||(14353888-14353938)
chr4 (15-81)||(37019598-37019664)
chr4 (46-85)||(9638933-9638972)
chr4 (26-77)||(10356505-10356556)
chr4 (26-81)||(11425871-11425926)
chr4 (166-205)||(18462936-18462975)
chr4 (1-75)||(11478698-11478772)
chr4 (4-56)||(21062593-21062645)
chr4 (26-81)||(15115150-15115205)
chr4 (1-67)||(15117610-15117677)
chr4 (42-81)||(26921706-26921745)
chr4 (26-81)||(42875725-42875780)
chr4 (1-56)||(12033029-12033085)
[»] chr6 (24 HSPs)
chr6 (11-205)||(18585592-18585803)
chr6 (11-93)||(28948490-28948573)
chr6 (1-91)||(19401012-19401102)
chr6 (1-85)||(23501595-23501680)
chr6 (15-81)||(15890770-15890836)
chr6 (1-75)||(18928614-18928688)
chr6 (15-81)||(27330039-27330105)
chr6 (15-81)||(27390779-27390845)
chr6 (26-81)||(7827900-7827955)
chr6 (26-81)||(23150356-23150411)
chr6 (15-81)||(19655289-19655355)
chr6 (166-205)||(35057457-35057496)
chr6 (155-205)||(3006963-3007013)
chr6 (167-205)||(13285661-13285699)
chr6 (1-69)||(31731949-31732017)
chr6 (1-67)||(18333850-18333917)
chr6 (1-67)||(24423384-24423451)
chr6 (26-81)||(27125546-27125601)
chr6 (1-67)||(33865115-33865182)
chr6 (1-58)||(18343037-18343095)
chr6 (157-205)||(18982325-18982374)
chr6 (1-56)||(12743168-12743224)
chr6 (26-74)||(18703503-18703551)
chr6 (26-74)||(18709438-18709486)
[»] scaffold0338 (1 HSPs)
scaffold0338 (47-166)||(80-199)
[»] scaffold0149 (3 HSPs)
scaffold0149 (11-136)||(21484-21609)
scaffold0149 (26-80)||(29642-29696)
scaffold0149 (158-205)||(21453-21500)
[»] scaffold0156 (1 HSPs)
scaffold0156 (11-128)||(16485-16602)
[»] scaffold0026 (3 HSPs)
scaffold0026 (112-205)||(9938-10031)
scaffold0026 (105-205)||(22035-22135)
scaffold0026 (26-81)||(146651-146706)
[»] chr8 (37 HSPs)
chr8 (120-205)||(22345036-22345121)
chr8 (120-205)||(22356696-22356781)
chr8 (11-93)||(22532186-22532268)
chr8 (11-93)||(22536871-22536953)
chr8 (1-96)||(22317955-22318050)
chr8 (136-205)||(20517126-20517195)
chr8 (1-85)||(45469264-45469348)
chr8 (149-205)||(36305755-36305811)
chr8 (26-81)||(20083707-20083762)
chr8 (1-79)||(42265553-42265631)
chr8 (4-85)||(31722541-31722622)
chr8 (1-79)||(3273819-3273898)
chr8 (26-81)||(5082281-5082336)
chr8 (26-81)||(6202704-6202759)
chr8 (26-81)||(19140693-19140748)
chr8 (26-81)||(37292633-37292688)
chr8 (11-80)||(39694331-39694400)
chr8 (26-81)||(20178598-20178654)
chr8 (1-69)||(36727083-36727151)
chr8 (157-205)||(42265647-42265695)
chr8 (26-81)||(5761462-5761517)
chr8 (26-81)||(6573125-6573180)
chr8 (46-85)||(20022122-20022161)
chr8 (1-67)||(20045453-20045520)
chr8 (155-205)||(22708414-22708464)
chr8 (111-155)||(20517120-20517164)
chr8 (1-67)||(1485239-1485306)
chr8 (1-67)||(4484117-4484184)
chr8 (26-81)||(6101822-6101877)
chr8 (1-67)||(14408702-14408769)
chr8 (1-67)||(14824613-14824680)
chr8 (26-81)||(39936079-39936134)
chr8 (26-81)||(42817976-42818031)
chr8 (1-58)||(25733864-25733921)
chr8 (1-68)||(4541628-4541696)
chr8 (138-174)||(22345086-22345122)
chr8 (138-174)||(22356746-22356782)
[»] chr3 (46 HSPs)
chr3 (11-93)||(9510970-9511052)
chr3 (11-93)||(9518945-9519027)
chr3 (1-91)||(49968903-49968993)
chr3 (139-205)||(6805000-6805066)
chr3 (140-201)||(24177843-24177904)
chr3 (1-77)||(35960973-35961049)
chr3 (13-92)||(19568264-19568343)
chr3 (1-77)||(33565018-33565094)
chr3 (1-79)||(37038978-37039057)
chr3 (105-155)||(6804985-6805035)
chr3 (1-79)||(11563654-11563732)
chr3 (139-205)||(13522422-13522487)
chr3 (1-79)||(42324016-42324094)
chr3 (1-69)||(13185834-13185902)
chr3 (26-81)||(10311455-10311510)
chr3 (26-81)||(10563636-10563691)
chr3 (26-81)||(17044894-17044949)
chr3 (26-81)||(17518942-17518997)
chr3 (26-81)||(17533804-17533859)
chr3 (26-81)||(40807924-40807979)
chr3 (1-79)||(45530646-45530725)
chr3 (26-81)||(49900658-49900713)
chr3 (26-81)||(50348095-50348150)
chr3 (155-205)||(6003097-6003147)
chr3 (7-81)||(11259359-11259433)
chr3 (89-155)||(13522391-13522457)
chr3 (11-68)||(24177790-24177847)
chr3 (26-74)||(35064610-35064658)
chr3 (26-81)||(22306652-22306707)
chr3 (26-81)||(40812761-40812816)
chr3 (26-81)||(41172440-41172495)
chr3 (1-69)||(11885602-11885669)
chr3 (46-85)||(14641638-14641677)
chr3 (1-67)||(15413268-15413335)
chr3 (27-74)||(15931577-15931624)
chr3 (26-81)||(17047054-17047109)
chr3 (1-67)||(17464015-17464082)
chr3 (26-81)||(17539034-17539089)
chr3 (1-67)||(34160163-34160230)
chr3 (26-81)||(44274346-44274401)
chr3 (1-67)||(45577699-45577766)
chr3 (1-67)||(55477329-55477396)
chr3 (26-75)||(17694001-17694050)
chr3 (1-56)||(13151046-13151102)
chr3 (1-56)||(13153514-13153570)
chr3 (29-81)||(35354530-35354582)
[»] scaffold0848 (1 HSPs)
scaffold0848 (4-91)||(2068-2155)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-93)||(8557-8650)
[»] scaffold0139 (2 HSPs)
scaffold0139 (120-205)||(40276-40361)
scaffold0139 (111-174)||(40248-40311)
[»] scaffold0037 (3 HSPs)
scaffold0037 (1-75)||(81501-81575)
scaffold0037 (6-82)||(113017-113093)
scaffold0037 (46-82)||(117890-117926)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-93)||(3096-3188)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-93)||(135548-135640)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-85)||(1103-1187)
[»] scaffold1941 (1 HSPs)
scaffold1941 (15-81)||(66-132)
[»] scaffold0439 (3 HSPs)
scaffold0439 (7-80)||(12323-12397)
scaffold0439 (139-204)||(12155-12219)
scaffold0439 (86-155)||(12184-12253)
[»] scaffold0180 (2 HSPs)
scaffold0180 (1-79)||(28373-28451)
scaffold0180 (157-205)||(28467-28515)
[»] scaffold0007 (3 HSPs)
scaffold0007 (1-79)||(158866-158944)
scaffold0007 (157-205)||(16667-16715)
scaffold0007 (157-205)||(18950-18999)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-74)||(20130-20202)
[»] scaffold0083 (2 HSPs)
scaffold0083 (11-92)||(10809-10888)
scaffold0083 (46-78)||(5124-5156)
[»] scaffold0859 (1 HSPs)
scaffold0859 (6-86)||(4605-4685)
[»] scaffold1283 (1 HSPs)
scaffold1283 (26-81)||(537-592)
[»] scaffold0334 (1 HSPs)
scaffold0334 (26-81)||(446-501)
[»] scaffold0241 (2 HSPs)
scaffold0241 (26-81)||(2492-2547)
scaffold0241 (26-81)||(3110-3165)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-72)||(31046-31116)
[»] scaffold0017 (3 HSPs)
scaffold0017 (154-205)||(26604-26655)
scaffold0017 (8-60)||(561-613)
scaffold0017 (157-205)||(23526-23573)
[»] scaffold1766 (1 HSPs)
scaffold1766 (15-81)||(754-820)
[»] scaffold0632 (1 HSPs)
scaffold0632 (27-81)||(1093-1147)
[»] scaffold0111 (2 HSPs)
scaffold0111 (27-81)||(12603-12657)
scaffold0111 (26-81)||(5311-5366)
[»] scaffold0080 (1 HSPs)
scaffold0080 (7-81)||(21843-21917)
[»] scaffold0004 (3 HSPs)
scaffold0004 (31-81)||(328364-328414)
scaffold0004 (44-81)||(72872-72909)
scaffold0004 (1-69)||(110113-110181)
[»] scaffold0001 (3 HSPs)
scaffold0001 (27-81)||(31922-31976)
scaffold0001 (27-81)||(37229-37283)
scaffold0001 (26-81)||(77615-77670)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-85)||(67043-67128)
[»] scaffold0116 (2 HSPs)
scaffold0116 (157-205)||(35602-35650)
scaffold0116 (1-79)||(35508-35586)
[»] scaffold0092 (1 HSPs)
scaffold0092 (157-205)||(38534-38581)
[»] scaffold1633 (1 HSPs)
scaffold1633 (26-81)||(1133-1188)
[»] scaffold0737 (2 HSPs)
scaffold0737 (26-81)||(4783-4838)
scaffold0737 (1-79)||(5862-5941)
[»] scaffold0407 (1 HSPs)
scaffold0407 (26-81)||(11343-11398)
[»] scaffold0328 (1 HSPs)
scaffold0328 (46-85)||(18731-18770)
[»] scaffold0308 (2 HSPs)
scaffold0308 (157-204)||(13307-13354)
scaffold0308 (1-79)||(13370-13448)
[»] scaffold0220 (2 HSPs)
scaffold0220 (46-85)||(13872-13911)
scaffold0220 (1-38)||(19924-19961)
[»] scaffold0207 (1 HSPs)
scaffold0207 (26-81)||(13461-13516)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-79)||(7205-7284)
[»] scaffold0077 (1 HSPs)
scaffold0077 (26-81)||(34267-34322)
[»] scaffold0064 (1 HSPs)
scaffold0064 (26-81)||(58674-58729)
[»] scaffold0125 (2 HSPs)
scaffold0125 (155-205)||(18201-18251)
scaffold0125 (155-187)||(7314-7346)
[»] scaffold1800 (1 HSPs)
scaffold1800 (157-205)||(521-567)
[»] scaffold0174 (2 HSPs)
scaffold0174 (44-81)||(11318-11355)
scaffold0174 (44-81)||(5198-5235)
[»] scaffold0802 (1 HSPs)
scaffold0802 (1-77)||(4754-4830)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-67)||(38659-38726)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-67)||(95248-95315)
[»] scaffold0020 (2 HSPs)
scaffold0020 (26-81)||(143539-143594)
scaffold0020 (26-81)||(169068-169123)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-67)||(158622-158689)
[»] scaffold0285 (1 HSPs)
scaffold0285 (44-81)||(19689-19726)
[»] scaffold0232 (1 HSPs)
scaffold0232 (1-58)||(4176-4233)
[»] scaffold0113 (1 HSPs)
scaffold0113 (44-81)||(35420-35457)
[»] scaffold0047 (1 HSPs)
scaffold0047 (48-81)||(78992-79025)


Alignment Details
Target: chr1 (Bit Score: 182; Significance: 1e-98; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 44822068 - 44822269
Alignment:
Q  4 tgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgttt 103  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  44822068 tgaaaattggatttaacaggtggtaggttgtagttctggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttg 44822167  T
Q  104 gaatttagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggta 203  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44822168 gaattaagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattgcaatttgattgttgaaagtgtaggta 44822267  T
Q  204 at 205  Q
    ||    
T  44822268 at 44822269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 14 - 205
Target Start/End: Original strand, 24723408 - 24723599
Alignment:
Q  14 atttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaatttagat 113  Q
    |||||||||||||||| |||||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||  |||| ||||    
T  24723408 atttaacaggtggtagattgtagttttggaaatttgagaattatgtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagat 24723507  T
Q  114 gttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||| ||| |||||    
T  24723508 gttaatgaagttagggttgtgaaaagaagttagagttttaaaaagaagttatggtttttaattgcaatttgattgttgaaagagtatgtaat 24723599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 7051976 - 7052117
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    ||||||||||||||||||| || ||||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  |||| |    
T  7051976 tggatttaacaggtggtagattttagttttagaaatttgggaattaggtttagaaattgtaattggttgttttaattgtagaattgattgttgaaattaa 7052075  T
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagtttt 152  Q
    |||||||| |||||||| ||| | |||||||||||| |||||    
T  7052076 gatgttaaagaagttagagttttaaaaagaagttagggtttt 7052117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 51324502 - 51324420
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    |||||||||||||||||||||||||||| ||  || |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  51324502 tggatttaacaggtggtaggttgtagttttgggaaattgggaattaggtttaaaagttgtaattggttgttttaatagtagaa 51324420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 22823265 - 22823350
Alignment:
Q  120 gaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||| |||||    
T  22823265 gaagttagggttttgaaaagaggttagggttttgaaaagaagatagggttttgaattgcaatttgattcttgaaagtgtaagtaat 22823350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7320638 - 7320730
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    |||||||||||| ||||||||||| |||| |||||||| ||  ||||||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  7320638 ttctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaattatgtttagatgttgtaattggttgatttaatagtagaa 7320730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 19676694 - 19676639
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  19676694 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgtt 19676639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 22350724 - 22350646
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| |||||||| || ||||||||||||| ||  ||||||||||||||| |||||||||| || ||||||    
T  22350724 ttctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 22350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 22350630 - 22350582
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  22350630 agaagttagggttttgaattgcaatttgattgttgaaggtgtaggtaat 22350582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 16058383 - 16058437
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  16058383 gtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgtt 16058437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13302909 - 13302847
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttag 63  Q
    |||||||||||| |||||||| || ||||||||||||| ||  ||||||||||||||||||||    
T  13302909 ttctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattaggtttag 13302847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 8276079 - 8276118
Alignment:
Q  46 tttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  8276079 tttgggaattaggtttagaagttgtaattggttgatttaa 8276118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 21046118 - 21046173
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||||||||| |||| |||||||||||||||||||    
T  21046118 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 21046173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 38056762 - 38056801
Alignment:
Q  46 tttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  38056762 tttgggaattaggtttagaagttgtaattggttgatttaa 38056801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 42913032 - 42912977
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||| |||||||||||| |||||||||||||||||||    
T  42913032 gtaggttgtagttgtgggaatttaggaattaggttttgaagttgtaattggttgtt 42912977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45755527 - 45755468
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtt 60  Q
    ||||||||| ||||||||||| || ||||||||||||| ||| |||||| ||||||||||    
T  45755527 ttctgaaaagtggatttaacaagttgtaggttgtagttttgagaatttgagaattaggtt 45755468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 20708149 - 20708199
Alignment:
Q  155 aaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||| |||||    
T  20708149 aaagaaattagggttttgaattgcaatttgattcttgaaagtgtaagtaat 20708199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 20633721 - 20633758
Alignment:
Q  44 aatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||||||||||| |||||||||||||||||||    
T  20633721 aatttgggaattaggttttgaagttgtaattggttgtt 20633758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 4595935 - 4595974
Alignment:
Q  46 tttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  4595935 tttgggaattagatttagaagttgtaattggttgatttaa 4595974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13989770 - 13989703
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  13989770 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 13989703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14237699 - 14237766
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  14237699 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 14237766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21474342 - 21474409
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  21474342 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 21474409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23592988 - 23593055
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  23592988 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 23593055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41373378 - 41373311
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  41373378 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttacaagt 41373311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42697791 - 42697732
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtt 60  Q
    |||||| |||||||||||||| || ||||||||||||| |||  ||||| ||||||||||    
T  42697791 ttctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaattaggtt 42697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 7052115 - 7052152
Alignment:
Q  168 ttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  7052115 ttttgaattgcaatttgattgttgaaagagtaggtaat 7052152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 21188126 - 21188172
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||  ||| |||| ||||||||||||||||||||||||||||    
T  21188126 agaagttagg--tttaaattgcaatttgattgttgaaagtgtaggtaat 21188172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 22823264 - 22823300
Alignment:
Q  138 agaagttagagttttgaaaagaagttagggttttgaa 174  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  22823264 agaagttagggttttgaaaagaggttagggttttgaa 22823300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 39061280 - 39061232
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||| |||||||||||||||  ||||||||| ||||||||||| |||||    
T  39061280 agaatttagggttttgaattgtaatttgattcttgaaagtgtaagtaat 39061232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 51083179 - 51083115
Alignment:
Q  4 tgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    |||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  51083179 tgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 51083115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 7e-88; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 6 - 205
Target Start/End: Complemental strand, 24884473 - 24884274
Alignment:
Q  6 aaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttga 105  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||    
T  24884473 aaaattcgatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtcttaattgtagaattgattgttgga 24884374  T
Q  106 atttagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||| |||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24884373 attaagatattaatgaagttaggtttgtgaaaagaagttagaattttgaaaagaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaat 24884274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 1383597 - 1383791
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |||| |    
T  1383597 tggatttaacaggtggtaggttgtagttttggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgtagaaattaa 1383696  T
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  1383697 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattgcaatttgattgttgaaagagtaggtaat 1383791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 357879 - 357716
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    |||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |    
T  357879 tggatttaacaggtggtaggttgtagtttttgaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaa 357780  T
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaa 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  357779 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagagttttgaa 357716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22501978 - 22501773
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaa-ttaggtttagaagttgtaattggttgttttaattgtagaatttatt 99  Q
    |||||| |||||||||||||| || || |||||||||| |   |||||||||| ||||| ||||||||||| ||||||||||||||||||| |||| |||    
T  22501978 ttctgagaattggatttaacatgttgtgggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgttttaattgtaaaattgatt 22501879  T
Q  100 gtttgaatttagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgta 199  Q
    ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  22501878 gttggaattaagatgttaacgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattgcaatttgtttgttgaaagtgta 22501779  T
Q  200 ggtaat 205  Q
    ||||||    
T  22501778 ggtaat 22501773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22509912 - 22509707
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaa-ttaggtttagaagttgtaattggttgttttaattgtagaatttatt 99  Q
    |||||| |||||||||||||| || || |||||||||| |   |||||||||| ||||| ||||||||||| ||||||||||||||||||| |||| |||    
T  22509912 ttctgagaattggatttaacatgttgtgggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgttttaattgtaaaattgatt 22509813  T
Q  100 gtttgaatttagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgta 199  Q
    ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  22509812 gttggaattaagatgttaacgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattgcaatttgtttgttgaaagtgta 22509713  T
Q  200 ggtaat 205  Q
    ||||||    
T  22509712 ggtaat 22509707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 25584347 - 25584442
Alignment:
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagtta-gggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||  |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  25584347 gatgttatagaagttagggttttgaaaagaagttagggttgtgaaaagaagttaggggttttgaattacaatttgattcttgaaagtgtaagtaat 25584442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25142211 - 25142133
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| |||||||| || ||||||||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  25142211 ttctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattaggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3539844 - 3539760
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||| | |||||||| || ||||||||||||| |   |||||| ||||||||||||||||||||||||||||| |||||    
T  3539844 ttctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaattaggtttagaagttgtaattggttgatttaa 3539760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18388234 - 18388312
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    ||||||||||||||||||||| || ||||||||||||| ||  ||||||||||||| | |||||||||| || ||||||    
T  18388234 ttctgaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaattatggttagaagttgcaaatggttg 18388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 24516180 - 24516114
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  24516180 tttaacatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 24516114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22260046 - 22259974
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaatt 74  Q
    |||||||||||| ||||||||||| ||||||||||||| |   ||||||||||||||| |||||||||||||||    
T  22260046 ttctgaaaattgaatttaacaggttgtaggttgtagtt-taggaatttgggaattaggcttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 18388328 - 18388376
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  18388328 agaagttagggttttgaattgcaatttgattgttgaaggtgtaggtaat 18388376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 5031198 - 5031253
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  5031198 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 5031253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 9975912 - 9975857
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  9975912 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 9975857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 17307469 - 17307414
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  17307469 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17307414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19358899 - 19358820
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttggg-aattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| |||||||| || || |||||||||| ||  |||||||| ||||||| ||||||||||||||||||||    
T  19358899 ttctgaaaattgaatttaacaagttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 22251517 - 22251572
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  22251517 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 22251572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 24780909 - 24780964
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  24780909 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 24780964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27852675 - 27852605
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgta 71  Q
    |||||||||||| |||||||| || ||||||||| ||| ||  |||||||||||||| |||||||||||||    
T  27852675 ttctgaaaattgaatttaacaagttgtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 19201269 - 19201324
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| |   |||||||||||||||||| |||||||||||||||||||    
T  19201269 gtaggttgtagttataggaatttgggaattaggttttgaagttgtaattggttgtt 19201324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 27484546 - 27484601
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||||||||| |||| |||||||||||||||||||    
T  27484546 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 27484601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 40912303 - 40912248
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||| |||||||||    
T  40912303 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtagttggttgtt 40912248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 36841258 - 36841192
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || ||||||||||||| ||  ||||| | |||||||||| |||||||||||||||||||    
T  36841258 tttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgtt 36841192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 20006063 - 20006109
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  20006063 agaagttagg--tttgaattgcaatttgattgttgaaagtgtaggtaat 20006109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5986184 - 5986125
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtt 60  Q
    ||||||||||||||||||||| || ||||||| ||||| |||  ||||| ||||||||||    
T  5986184 ttctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaattaggtt 5986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18809847 - 18809780
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  18809847 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 18809780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23711271 - 23711338
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  23711271 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 23711338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 24436631 - 24436576
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||| |||||||||| |||||||||||| ||||||    
T  24436631 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgtt 24436576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28578009 - 28577942
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  28578009 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 28577942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32038755 - 32038822
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  32038755 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 32038822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 37270682 - 37270627
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| |||||| |||||| |||| ||||||||||| |||||||    
T  37270682 gtaggttgtagttatgagaatttgagaattaagttttgaagttgtaatgggttgtt 37270627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22690643 - 22690585
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattagg 58  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| |||||||||||||||    
T  22690643 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagg 22690585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9785546 - 9785489
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattagg 58  Q
    ||||||||||||||||||| | || ||| ||| ||||| ||| |||||||||||||||    
T  9785546 ttctgaaaattggatttaatatgttgtaagttttagttttgagaatttgggaattagg 9785489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 45535885 - 45535839
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||  ||| |||| ||||||||||||||||||||||||||||    
T  45535885 agaagttagg--tttaaattgcaatttgattgttgaaagtgtaggtaat 45535839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18390259 - 18390326
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttg 69  Q
    |||||||||| | |||||||| ||| || ||||||||| ||  ||||||||||||||| ||||||||||    
T  18390259 ttctgaaaatagaatttaacaagtg-tatgttgtagttttgggaatttgggaattaggattagaagttg 18390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 151; Significance: 4e-80; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 6739 - 6933
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||  |||| |    
T  6739 tggatttaacaggtggtaggttgtagttttggaaatttaggaattaggtttagaagttgtaattggttgttttaattgtagaattgatttttgaaattaa 6838  T
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  6839 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttaggattttgaattgcaatttgattgttgaaagtgtatgtaat 6933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14854 - 14798
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaatta 56  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| |||||||||||||    
T  14854 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatta 14798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 17876211 - 17876044
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  17876211 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtcttaattgtagaattgattg 17876112  T
Q  101 tttgaatttagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggtt 169  Q
    || ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17876111 ttggaattaagatgttaatg-agttagggttgtgaaaagaagttagagttttgaaaagaagttagggtt 17876044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 31456958 - 31456764
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    |||||||||||   |||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |    
T  31456958 tggatttaacacaaggtaggttgtagttttggaaatttggaaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaa 31456859  T
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  31456858 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagagctttgaattgcaatttgattgttgaaagtgtaggtaat 31456764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 47 - 201
Target Start/End: Original strand, 30138064 - 30138218
Alignment:
Q  47 ttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaatttagatgttaatgaagttagggttgtgaaaagaagttag 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  30138064 ttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttagggttgtgaaaagaagttag 30138163  T
Q  147 agttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtagg 201  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30138164 agttttgaaaagaagttagggttttgaattgcaatttgattgttgaaagtgtagg 30138218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 36508678 - 36508882
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattg 100  Q
    |||||||||| ||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  36508678 ttctgaaaat-ggatttaacaggtggtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgttttaattgtagaattgattg 36508776  T
Q  101 tttgaatttagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttaggg-ttttgaattacaatttgattgttgaaagtgta 199  Q
     |  |||| |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||| |||||||||||||||||| |||    
T  36508777 atgaaattaagatgttaatgaagttagggttatgaaaagaagtaagagttttaaaaagaagttagggtttttgaattgcaatttgattgttgaaagagta 36508876  T
Q  200 ggtaat 205  Q
    ||||||    
T  36508877 ggtaat 36508882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 17876055 - 17875970
Alignment:
Q  120 gaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17876055 gaagttagggttgcgaaaagaagttagagttttgaagagaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaat 17875970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 21405672 - 21405751
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttggg-aattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| ||||||||||| || |||||||||| ||  |||||||| ||||||| ||||||||||||||||||||    
T  21405672 ttctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 7484985 - 7484930
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| |||||| ||||||||||| |||||||||||||||||||    
T  7484985 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 7484930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 31251941 - 31252011
Alignment:
Q  7 aaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggt 77  Q
    ||||||||||||||||||  |||||||||||| |   |||||| |||||||||||||||||| ||||||||    
T  31251941 aaattggatttaacaggttataggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 19921632 - 19921566
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || |||||||||| || || ||||||||||||||||||| |||||| ||||| ||||||    
T  19921632 tttaacatgttgtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgtt 19921566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 21617978 - 21618047
Alignment:
Q  6 aaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattg 75  Q
    ||||||| |||||||| || ||||||||||||| ||  |||||| |||||||| |||||||||| |||||    
T  21617978 aaaattgaatttaacaagttgtaggttgtagttttgggaatttgagaattagggttagaagttgaaattg 21618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 21300113 - 21300168
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||| |||||| ||  |||||| ||||||||||| |||||||||||||||||||    
T  21300113 gtaggtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 21300168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 31622091 - 31622053
Alignment:
Q  43 aaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  31622091 aaatttgggaattaggttttgaagtcgtaattggttgtt 31622053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 39246040 - 39245982
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattagg 58  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| |||||||||||||||    
T  39246040 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagg 39245982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 20566515 - 20566482
Alignment:
Q  48 tgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||||||| |||||||||||||||||||    
T  20566515 tgggaattaggttttgaagttgtaattggttgtt 20566482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 20469222 - 20469258
Alignment:
Q  2 tctgaaaattggatttaacaggtggtaggttgtagtt 38  Q
    |||||||||||||||||||| || |||||||||||||    
T  20469222 tctgaaaattggatttaacaagttgtaggttgtagtt 20469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 47 - 205
Target Start/End: Complemental strand, 14274294 - 14274136
Alignment:
Q  47 ttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaatttagatgttaatgaagttagggttgtgaaaagaagttag 146  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||||||||||||||    
T  14274294 ttgggaattaggtttagaagttgtaatttgttgttttaattgtagaattgattgttggaattaaggtgttaatgaagttagggttgtgaaaagaagttag 14274195  T
Q  147 agttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14274194 agttttgaaaagaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaat 14274136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 47974874 - 47974999
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||  |||| |    
T  47974874 tggatttaacaggtggtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgttttaattgtagagttgattgttgaaattaa 47974973  T
Q  111 gatgttaatgaagttagggttgtgaa 136  Q
    |||| |||||||||||||||| ||||    
T  47974974 gatgctaatgaagttagggttttgaa 47974999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 708523 - 708625
Alignment:
Q  50 ggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaatttagatgttaatgaagttagggttgtgaaaagaagttagagt 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| ||||||||| |||||||| ||| |||||||||||||| ||    
T  708523 ggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaaagaagttagagttttgaaaagaagttagggt 708622  T
Q  150 ttt 152  Q
    |||    
T  708623 ttt 708625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15095681 - 15095773
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    |||||||||||| ||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||| |||| |||||| ||||||    
T  15095681 ttctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaattaggtttagaagttgtaattagttgatttaatagtagaa 15095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 15140221 - 15140129
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    |||||||||||| ||||||||||| ||||||||||||| ||  ||||||||||||||||||| |||||||||||||||| |||||| ||||||    
T  15140221 ttctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaattaggtttaaaagttgtaattggttgatttaatagtagaa 15140129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 12754721 - 12754804
Alignment:
Q  123 gttagggttgtgaaaagaagttagagttttgaaaagaagttaggg-ttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||||| |||||||||    
T  12754721 gttagggttgtgaaaagaagttagagttttaaaaagaagtttgggtttttgaattgcaatttgattgttgaaagagtaggtaat 12754804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13698683 - 13698761
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    ||||||||||||||||| ||| ||  |||||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  13698683 ttctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaattagggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 8135287 - 8135366
Alignment:
Q  7 aaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaat 86  Q
    |||||| ||||||||||| ||||||||||||| |   |||||| ||||||||||||||||||||||||||||| ||||||    
T  8135287 aaattgaatttaacaggttgtaggttgtagttttaggaatttgagaattaggtttagaagttgtaattggttgatttaat 8135366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12557929 - 12557853
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggt 77  Q
    |||| ||||||| ||||||||||| ||||||||||||| ||  ||||||| |||||||||||||||||| |||||||    
T  12557929 ttctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttggaaattaggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14218940 - 14219008
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttg 69  Q
    |||||||||||| |||||||| || ||||||||||||| ||| ||||| ||||||||||||||||||||    
T  14218940 ttctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaattaggtttagaagttg 14219008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35771486 - 35771554
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttg 69  Q
    |||||||||| | |||||||| || ||||||||||||| || |||||||||||||||||||||||||||    
T  35771486 ttctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaattaggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 20620269 - 20620214
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  20620269 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtaattggttgtt 20620214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 12127221 - 12127287
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || ||||||| ||||| || ||||||||||||||||||| |||||||||||||||||||    
T  12127221 tttaacatgttgtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgtt 12127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 13132371 - 13132449
Alignment:
Q  7 aaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||| |||||||| || |||||| |||||| ||  |||||||||||||||||||||||||||||| ||||| |||||    
T  13132371 aaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttgatttaa 13132449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 4071826 - 4071759
Alignment:
Q  2 tctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttg 69  Q
    |||||||||||||||||||| || ||||||||||||| ||   ||||| |||||||||||||||||||    
T  4071826 tctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaattaggtttagaagttg 4071759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 8851228 - 8851283
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| ||||||| |||||||||| |||||||||||||||||||    
T  8851228 gtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgtt 8851283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 10277310 - 10277255
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| |||||| ||||||||||| |||||||||||||||||||    
T  10277310 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 10277255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11054721 - 11054642
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttggg-aattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| ||||||||||| |||||||||| || ||  |||||||| ||||||| ||| ||||||||||||||||    
T  11054721 ttctgaaaattgaatttaacaggttgtaggttgtaattttgggaatttgggaaattagggttataagttgtaattggttg 11054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 12322999 - 12323054
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||| |||||||||    
T  12322999 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgtt 12323054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 12465329 - 12465384
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  12465329 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 12465384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 13147541 - 13147596
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  13147541 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 13147596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 15289111 - 15289044
Alignment:
Q  2 tctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttg 69  Q
    |||||||||||||||||||| || ||||||||||||| |||  ||||| |||||||||||| ||||||    
T  15289111 tctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaattaggtttaaaagttg 15289044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 41285033 - 41284963
Alignment:
Q  7 aaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggt 77  Q
    ||||||||||||| ||||  |||||||||||| |   ||||||||||||||||||||||||| ||||||||    
T  41285033 aaattggatttaataggttataggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 12754666 - 12754719
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttaga 64  Q
    |||||||||||||||||||||||||||  || |||||||||||||| |||||||    
T  12754666 tggatttaacaggtggtaggttgtagtaatggaaatttgggaattatgtttaga 12754719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 21661217 - 21661168
Alignment:
Q  156 aagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  21661217 aagaagttagggttttgaattgcaatttgattcttgaaagtgtaagtaat 21661168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 33002126 - 33002078
Alignment:
Q  44 aatttgggaattaggtttagaagttgtaattggttgttttaattgtaga 92  Q
    ||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  33002126 aatttgggaattagggttagaagttgtaattggttgttgtaatagtaga 33002078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 48807370 - 48807454
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||| | |||||||| || |||| |||||||| ||  |||||||||||| |||  |||||||||||||||||| |||||    
T  48807370 ttctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaatttggtacagaagttgtaattggttgatttaa 48807454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 14180467 - 14180522
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||||||||| |||| |||||||||||||||||||    
T  14180467 gtaggttgtagttatgggaatttgggaattatgttttgaagttgtaattggttgtt 14180522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 15624021 - 15623950
Alignment:
Q  7 aaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggtt 78  Q
    |||||| |||||| |||| |||| |||||||| ||  |||||| ||||||||||||| ||||||||||||||    
T  15624021 aaattgaatttaataggttgtagtttgtagttttgggaatttgagaattaggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 20214130 - 20214075
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||||||||| |||| |||||||||||||||||||    
T  20214130 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 20214075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 32433658 - 32433713
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||    
T  32433658 gtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgtt 32433713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 36685199 - 36685246
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattagg 58  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||    
T  36685199 tggatttaacaggttgtaggttgtagttttggaaatttgggaattagg 36685246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 46386157 - 46386212
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||    
T  46386157 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 46386212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 47974983 - 47975030
Alignment:
Q  158 gaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  47974983 gaagttagggttttgaattgcaatttgattgttgaaagattaggtaat 47975030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 12372255 - 12372202
Alignment:
Q  28 aggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||    
T  12372255 aggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 12372202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 17070384 - 17070425
Alignment:
Q  51 gaattaggtttagaagttgtaattggttgttttaattgtaga 92  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  17070384 gaattaggtttagaagttgtaattggttgatttaagtgtaga 17070425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 457227 - 457160
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  457227 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 457160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 11067451 - 11067396
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| || || |||||||||||||    
T  11067451 gtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgtt 11067396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13870250 - 13870183
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  13870250 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 13870183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15375971 - 15376038
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  15375971 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 15376038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16460079 - 16460146
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  16460079 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 16460146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20384381 - 20384448
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  20384381 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 20384448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 37539400 - 37539361
Alignment:
Q  166 ggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  37539400 ggtttagaatttcaatttgattgttgaaagtgtaggtaat 37539361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41523824 - 41523757
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  41523824 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 41523757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41526286 - 41526219
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  41526286 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 41526219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18628470 - 18628412
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattagg 58  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| |||||||||||||||    
T  18628470 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagg 18628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 33060398 - 33060356
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtagg 201  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||    
T  33060398 agaagttagg--tttgaattgcaatttgattgttgaaagtgtagg 33060356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 106105 - 106300
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    |||||||||||||||||||  ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||  |||| |    
T  106105 tggatttaacaggtggtagactgtagttttggaaatttgggaattaggtttagacgttgtaattggttgttttaattgtagaattgattgttgaaattaa 106204  T
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttaggg-ttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||| | |||||||    
T  106205 gatgttaacgaagttagggttgtgaaaagaagttagagttttaaaaagaagttagggtttttgaattgcaatttgattgttgaaagagaaggtaat 106300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 2e-66; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 14549758 - 14549563
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||  ||||      
T  14549758 tggatttaacaggtggtaggttgtagttttggaaatttgggaattaggtttagaagttgtaattaggtgttttaattgtagaattgattgttaaaattag 14549659  T
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttaggg-ttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||||||| |||||||||||||||||| ||| |||||    
T  14549658 gatgttaatgaagttagggttgtgaaaagaagttagatttttaaaaacaagttagggtttttgaattgcaatttgattgttgaaagagtatgtaat 14549563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 19434613 - 19434798
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    |||||||||||||||||||||||||||| |  |||||||||||||| |||||||||||||          ||||| ||||||||| ||||||  |||| |    
T  19434613 tggatttaacaggtggtaggttgtagtttttgaaatttgggaattaagtttagaagttgt----------tttaaatgtagaattgattgttgaaattaa 19434702  T
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttaggg-ttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  19434703 gatgttaatgaagttagggctgtgaaaagaagttagagttttaaaaagaagttagggtttttgaattgcaatttgattgttgaaagagtaggtaat 19434798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 45314202 - 45314276
Alignment:
Q  130 ttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||| ||||||||||| |||||    
T  45314202 ttgtgaaaagaagttagggttttgaaaagaagtttggg-tttgaattgcaatttgattcttgaaagtgtaagtaat 45314276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9924161 - 9924085
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggt 77  Q
    |||||||||||| |||||||| || |||||||| |||| ||  ||||||| ||||||||||||||||||||||||||    
T  9924161 ttctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaattaggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 6633606 - 6633661
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| |||||| ||||||||||| |||||||||||||||||||    
T  6633606 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 6633661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9870489 - 9870568
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttggg-aattaggtttagaagttgtaattggttg 79  Q
    ||||||||||||||||| ||| |  ||||||||||||| ||  |||||||| ||||||| ||||||||||||||||||||    
T  9870489 ttctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 16998508 - 16998453
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  16998508 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 16998453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 25091636 - 25091581
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  25091636 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 25091581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 46001600 - 46001655
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| |||||| ||||||||||| |||||||||||||||||||    
T  46001600 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 46001655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 53630543 - 53630598
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  53630543 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 53630598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 14353888 - 14353938
Alignment:
Q  155 aaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  14353888 aaagaagttagggttttgaattgcaatttgattcttgaaagtgtaagtaat 14353938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 37019664 - 37019598
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || ||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||    
T  37019664 tttaacatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 37019598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 9638972 - 9638933
Alignment:
Q  46 tttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  9638972 tttgggaattaggtttagaagttgtaattggttgatttaa 9638933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 10356505 - 10356556
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggt 77  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||    
T  10356505 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggt 10356556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 11425926 - 11425871
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| ||| |||||||||||||||    
T  11425926 gtaggttgtagttatgggaatttgggaattaggttttgaaattgtaattggttgtt 11425871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 18462975 - 18462936
Alignment:
Q  166 ggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  18462975 ggttttaaattacaatttgattgttgaaagtgtaggtaat 18462936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11478698 - 11478772
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattg 75  Q
    |||||||||||| |||||||| || |||| ||| |||| ||  ||||||| |||||||||||||| |||||||||    
T  11478698 ttctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaattaggtttagaacttgtaattg 11478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 21062645 - 21062593
Alignment:
Q  4 tgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaatta 56  Q
    |||||||||||||||||| |||||||||||||||| |||  ||||| ||||||    
T  21062645 tgaaaattggatttaacaagtggtaggttgtagttttgaggatttgagaatta 21062593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 15115205 - 15115150
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||  ||| |||||||||||||||||||    
T  15115205 gtaggttgtagttatgggaatttgggaattattttttgaagttgtaattggttgtt 15115150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15117610 - 15117677
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  15117610 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 15117677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 26921706 - 26921745
Alignment:
Q  42 aaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  26921706 aaaatttgggaattaggttttgaagtcgtaattggttgtt 26921745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 42875780 - 42875725
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||||||||||| |||||    
T  42875780 gtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgtt 42875725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12033029 - 12033085
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaatta 56  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| |||||||||||||    
T  12033029 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatta 12033085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 1e-58; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 11 - 205
Target Start/End: Complemental strand, 18585803 - 18585592
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattg---------- 100  Q
    |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||               
T  18585803 tggatttaacaggtggtaggttgtagttttggaaatttaggaattaggtttagaagttgtaattggttgttttaattgtagaattgatttaattgtagaa 18585704  T
Q  101 ------tttgaattta-gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaa 193  Q
          |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  18585703 ttgatttttgaaattaagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttaggattttgaattgcaatttgattgttgaa 18585604  T
Q  194 agtgtaggtaat 205  Q
    |||||| |||||    
T  18585603 agtgtatgtaat 18585592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 28948573 - 28948490
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctga-aaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    ||||||||||| |||||| ||||||| | | | |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28948573 tggatttaacaagtggtaagttgtaggttttagaaatttgggaattaggtttagaagttgtaattggttgttttaatagtagaa 28948490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19401102 - 19401012
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtag 91  Q
    |||||||||||| ||||||||||| ||||||||||||| ||  |||||| |||||||||||| |||||||||||| ||| |||||| ||||    
T  19401102 ttctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaattaggtttataagttgtaattgtttgatttaatagtag 19401012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23501680 - 23501595
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttct-gaaaatttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    ||||||||| || |||||||| || ||||||||||||| | | |||||||||||||||||||||||||||||||| |||| |||||    
T  23501680 ttctgaaaactgaatttaacaagttgtaggttgtagtttttggaaatttgggaattaggtttagaagttgtaatttgttgatttaa 23501595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 15890770 - 15890836
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  15890770 tttaacatgttgtaggttgtagttttgttaatttgggaattaggttttgaagttgtaattggttgtt 15890836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18928688 - 18928614
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattg 75  Q
    |||||||||||| |||||||| || |||||||| |||| ||  ||||||| ||||||||||||||||||||||||    
T  18928688 ttctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaattaggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 27330039 - 27330105
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  27330039 tttaacatgttgtaggttgtagttatggcaatttgggaattaggttttgaagttgtaattggttgtt 27330105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 27390779 - 27390845
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  27390779 tttaacatgttgtaggttgtagttatggcaatttgggaattaggttttgaagttgtaattggttgtt 27390845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 7827955 - 7827900
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  7827955 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 7827900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 23150356 - 23150411
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  23150356 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 23150411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 19655289 - 19655355
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || ||||||||||||| ||  |||||||||||||||||| |||||||||||| ||||||    
T  19655289 tttaacatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgtt 19655355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 35057496 - 35057457
Alignment:
Q  166 ggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  35057496 ggttttgaatttcaatttgattgttgaaagtgtaggtaat 35057457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 3006963 - 3007013
Alignment:
Q  155 aaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||| |||||    
T  3006963 aaagaagttatggttttgaattgcaatttgattcttgaaagtgtaagtaat 3007013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 13285699 - 13285661
Alignment:
Q  167 gttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  13285699 gttttgaatttcaatttgattgttgaaagtgtaggtaat 13285661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31731949 - 31732017
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttg 69  Q
    ||||||||||||||||| ||| || ||||||||||||| ||   ||||| |||||||||||| ||||||    
T  31731949 ttctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaattaggtttaaaagttg 31732017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18333850 - 18333917
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  18333850 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 18333917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24423451 - 24423384
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  24423451 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 24423384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 27125546 - 27125601
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||||| |||||||| |||||||||||| ||||||    
T  27125546 gtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgtt 27125601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33865182 - 33865115
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  33865182 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 33865115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18343095 - 18343037
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattagg 58  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| |||||||||||||||    
T  18343095 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagg 18343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 18982374 - 18982325
Alignment:
Q  157 agaagttagggttttgaa-ttacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||| || || |||||||||||||||||| |||||||||    
T  18982374 agaagttagggtttttaaattgcaatttgattgttgaaagcgtaggtaat 18982325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12743224 - 12743168
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaatta 56  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| |||||||||||||    
T  12743224 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatta 12743168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 18703551 - 18703503
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaatt 74  Q
    ||||||||||||| ||  |||||||||||||| ||| ||||||||||||    
T  18703551 gtaggttgtagttatgggaatttgggaattagattttgaagttgtaatt 18703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 18709486 - 18709438
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaatt 74  Q
    ||||||||||||| ||  |||||||||||||| ||| ||||||||||||    
T  18709486 gtaggttgtagttatgggaatttgggaattagattttgaagttgtaatt 18709438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 166
Target Start/End: Complemental strand, 199 - 80
Alignment:
Q  47 ttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaatttagatgttaatgaagttagggttgtgaaaagaagttag 146  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  199 ttggaaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttaaggttgtgaaaagaagttag 100  T
Q  147 agttttgaaaagaagttagg 166  Q
    ||||||||||||||||||||    
T  99 agttttgaaaagaagttagg 80  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 136
Target Start/End: Complemental strand, 21609 - 21484
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    |||||||||||| |||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||| |    
T  21609 tggatttaacagatggtagcttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgttttaattgtagaattgattgtttaaattaa 21510  T
Q  111 gatgttaatgaagttagggttgtgaa 136  Q
    ||||||||||||||||||||| ||||    
T  21509 gatgttaatgaagttagggttttgaa 21484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 29642 - 29696
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 80  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||||||||    
T  29642 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 29696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 21500 - 21453
Alignment:
Q  158 gaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  21500 gaagttagggttttgaattgcaatttcattgttgaaagagtaggtaat 21453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 16602 - 16485
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatttattgtttgaattta 110  Q
    ||||||||||| |||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |    
T  16602 tggatttaacatgtggtaggttgtagttttggaaatttggcaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaa 16503  T
Q  111 gatgttaatgaagttagg 128  Q
    ||||||||||||||||||    
T  16502 gatgttaatgaagttagg 16485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 10031 - 9938
Alignment:
Q  112 atgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  10031 atgttaatgaagttaggcttgtgaaaagaagttagagttttaaaaagaagttagggttttgaattgcaatttgattgttgaaagagtaggtaat 9938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 22135 - 22035
Alignment:
Q  105 aatttagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaa 204  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  22135 aattaagatgtaaatgaagttagggttgtgaaaagaagttagagttttaaaatgaagttagggttttgaattgcaatttgattgttgaaagagtaggtaa 22036  T
Q  205 t 205  Q
    |    
T  22035 t 22035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 146706 - 146651
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||| ||||||||||||    
T  146706 gtaggttgtagttatgggaatttgggaattaggttttgaagttataattggttgtt 146651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 2e-29; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 22345121 - 22345036
Alignment:
Q  120 gaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  22345121 gaagttagggttttgaaaagaagttagggttgtgaaaagaagttatggttttgaattgcaatttgattgttgaaagtgtaggtaat 22345036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 22356781 - 22356696
Alignment:
Q  120 gaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  22356781 gaagttagggttttgaaaagaagttagggttgtgaaaagaagttatggttttgaattgcaatttgattgttgaaagtgtaggtaat 22356696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 22532186 - 22532268
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    |||||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||| |||||||||| ||||||    
T  22532186 tggatttaacaggtggtaggttgtagttttggaaaattgggaattaggtttaaaagttgtaattgattgttttaatagtagaa 22532268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 22536871 - 22536953
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    |||||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||| |||||||||| ||||||    
T  22536871 tggatttaacaggtggtaggttgtagttttggaaaattgggaattaggtttaaaagttgtaattgattgttttaatagtagaa 22536953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22317955 - 22318050
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattt 96  Q
    |||||||||||| |||||||||||  ||||||||||||  |  ||||||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  22317955 ttctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggatttaggtttagaagttgtaattggttggtttaatagtagaattt 22318050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 20517126 - 20517195
Alignment:
Q  136 aaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  20517126 aaagaagttagggttgtgaaaagaagttggggttttgaattgcaatttgattgttgaaagtgtaggtaat 20517195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 45469264 - 45469348
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||| | |||||||| || ||||||| ||||| || |||||||||||||| |||||||||||||||||||||| |||||    
T  45469264 ttctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaattatgtttagaagttgtaattggttgatttaa 45469348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 36305811 - 36305755
Alignment:
Q  149 ttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  36305811 ttttgaaaagaagttagggttttgaattgcaatttgattcttgaaagtgtaagtaat 36305755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 20083707 - 20083762
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  20083707 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgtt 20083762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 42265553 - 42265631
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| |||||||| || ||||||||||||| ||  ||||||||||||||| |||||||||| || ||||||    
T  42265553 ttctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 42265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 31722541 - 31722622
Alignment:
Q  4 tgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    ||||||| | |||||||| || ||||||||||||| ||  ||||||| |||| ||||||||||||||||||||||| |||||    
T  31722541 tgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaatttggtttagaagttgtaattggttgatttaa 31722622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3273898 - 3273819
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttggg-aattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| ||||||||||| || |||||||||| ||  |||||||| ||||||| ||||||||||| ||||||||    
T  3273898 ttctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtgattggttg 3273819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 5082281 - 5082336
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  5082281 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 5082336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 6202759 - 6202704
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| |||||| ||||||||||| |||||||||||||||||||    
T  6202759 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 6202704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 19140748 - 19140693
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  19140748 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 19140693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 37292688 - 37292633
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| |||||| ||||||||||| |||||||||||||||||||    
T  37292688 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 37292633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 39694331 - 39694400
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 80  Q
    ||||||||||| || ||||||||||||| ||  ||||||||||||||| ||||| ||||||||| |||||    
T  39694331 tggatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagacgttgtaattagttgt 39694400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 20178598 - 20178654
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgt-aattggttgtt 81  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||| |||||||||||    
T  20178598 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgtt 20178654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36727083 - 36727151
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttg 69  Q
    ||||||||||||||||||||| || ||||||||||||| |    ||||| |||||||||||||||||||    
T  36727083 ttctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgagaattaggtttagaagttg 36727151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 42265647 - 42265695
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  42265647 agaagttagggttttgaattgcaatttgattgttgaaggtgtatgtaat 42265695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 5761517 - 5761462
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||| ||||||    
T  5761517 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgtt 5761462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 6573125 - 6573180
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||||||| |||||| |||||||||||||||||||    
T  6573125 gtaggttgtagttatgggaatttgggaatgaggttttgaagttgtaattggttgtt 6573180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 20022122 - 20022161
Alignment:
Q  46 tttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  20022122 tttgggaattaggtttagaagttgtaattggttgatttaa 20022161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20045453 - 20045520
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||||||||||||||||||| ||| ||||    
T  20045453 ttctgaaaattggatttaacatgttgtaggttttagtttttgaaaatttgggaattagggttaaaagt 20045520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 22708414 - 22708464
Alignment:
Q  155 aaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||| |||||    
T  22708414 aaagaagttagggttttaaattgcaatttgattcttgaaagtgtaagtaat 22708464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 20517120 - 20517164
Alignment:
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaa 155  Q
    |||||||| ||||||||||||||||||||||||| | ||||||||    
T  20517120 gatgttaaagaagttagggttgtgaaaagaagttggggttttgaa 20517164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1485306 - 1485239
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  1485306 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 1485239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4484184 - 4484117
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  4484184 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 4484117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 6101822 - 6101877
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||||||| |||||| |||||| ||||||||||||    
T  6101822 gtaggttgtagttatgggaatttgggaatcaggttttgaagttataattggttgtt 6101877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14408702 - 14408769
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  14408702 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 14408769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14824680 - 14824613
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  14824680 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 14824613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 39936079 - 39936134
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||| ||||||||||| |||||||||||| ||||||    
T  39936079 gtaggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgtt 39936134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 42817976 - 42818031
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||| |||||| ||| |||||||||||||||||||    
T  42817976 gtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgtt 42818031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25733864 - 25733921
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattagg 58  Q
    ||||||||||||||||||| | || ||| ||| ||||| ||| |||||||||||||||    
T  25733864 ttctgaaaattggatttaatatgttgtaagttttagttttgagaatttgggaattagg 25733921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4541628 - 4541696
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagtt 68  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||| ||||| ||| |||||    
T  4541628 ttctgaaaattggatttaacatgttgtaggttttagtttttgataatttgggatttagggttaaaagtt 4541696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 22345122 - 22345086
Alignment:
Q  138 agaagttagagttttgaaaagaagttagggttttgaa 174  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  22345122 agaagttagggttttgaaaagaagttagggttgtgaa 22345086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 22356782 - 22356746
Alignment:
Q  138 agaagttagagttttgaaaagaagttagggttttgaa 174  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  22356782 agaagttagggttttgaaaagaagttagggttgtgaa 22356746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 3e-25; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 9510970 - 9511052
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    ||||||||||||||||||| |||||||| ||  |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  9510970 tggatttaacaggtggtagattgtagttttgggaatttgagaattaggtttagaagttgtaattggttgttttaatagtagaa 9511052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 9518945 - 9519027
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    ||||||||||||||||||| |||||||| ||  |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  9518945 tggatttaacaggtggtagattgtagttttgggaatttgagaattaggtttagaagttgtaattggttgttttaatagtagaa 9519027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 49968903 - 49968993
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtag 91  Q
    |||||||||||| ||||||||||| |||| |||||||| ||| ||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  49968903 ttctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaattaggtttataagttgtaattggttgatttaatagtag 49968993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 6805000 - 6805066
Alignment:
Q  139 gaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  6805000 gaagttagggttgtgaaaagaagttagggttttgaattgcaatttgattgttgaaagagtaggtaat 6805066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 24177843 - 24177904
Alignment:
Q  140 aagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtagg 201  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  24177843 aagttagagttttaaaaagaagttagggttttgaattgcaatttgattgttgaaagagtagg 24177904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 35960973 - 35961049
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggt 77  Q
    |||||||||||| |||||||| || |||||||| |||| || |||||||| ||||||||||||||||||||||||||    
T  35960973 ttctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaattaggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 19568264 - 19568343
Alignment:
Q  13 gatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtaga 92  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||| |||| |||||    
T  19568264 gatttaacaggttgtaggttgtagttttgggaatttgggaattagggttagaagttgtaattggtagttgtaatagtaga 19568343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 33565094 - 33565018
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggt 77  Q
    |||||||||||| |||||||| || |||||||| |||| ||  ||||||| ||||||||||||||||||||||||||    
T  33565094 ttctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaattaggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37039057 - 37038978
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttggg-aattaggtttagaagttgtaattggttg 79  Q
    ||||||||||||||||||||| || ||||||||||||| ||  |||||||| ||||||| ||| ||||||||||||||||    
T  37039057 ttctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgtaattggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 155
Target Start/End: Original strand, 6804985 - 6805035
Alignment:
Q  105 aatttagatgttaatgaagttagggttgtgaaaagaagttagagttttgaa 155  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  6804985 aattaagatgttaatgaagttagggttgtgaaaagaagttagggttttgaa 6805035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11563732 - 11563654
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    ||||||||||   |||||||| || ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||    
T  11563732 ttctgaaaatcaaatttaacaagttgtaggttgtagttttgggaatttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 13522422 - 13522487
Alignment:
Q  139 gaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||| ||| |||| |||||||||    
T  13522422 gaagttagagttttgaaaagaagttagggttttgaatttcaaattgatcgtt-aaagagtaggtaat 13522487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 42324016 - 42324094
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| |||| ||| || ||||||||||||| ||  ||||||| ||||||| ||||||||||||||||||||    
T  42324016 ttctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaattagggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13185902 - 13185834
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttg 69  Q
    |||| ||||| | |||||||| || ||||||||||||| || |||||||||||||||||||||||||||    
T  13185902 ttctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaattaggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 10311510 - 10311455
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| |||||| ||||||||||| |||||||||||||||||||    
T  10311510 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 10311455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 10563691 - 10563636
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||| |||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  10563691 gtagtttgtagttatggaaatttgggaattaggttttgaagttgtaattggttgtt 10563636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 17044949 - 17044894
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  17044949 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17044894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 17518942 - 17518997
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  17518942 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17518997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 17533804 - 17533859
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  17533804 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17533859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 40807979 - 40807924
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  40807979 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 40807924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45530646 - 45530725
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttg-ggaattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| ||||||||||| || |||||||||| ||  |||||| | ||||||| ||||||||||||||||||||    
T  45530646 ttctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 49900713 - 49900658
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  49900713 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 49900658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 50348095 - 50348150
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  50348095 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 50348150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 6003147 - 6003097
Alignment:
Q  155 aaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  6003147 aaagaaattagggttttgaattacaatttgattcttgaaagtgtaagtaat 6003097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 11259433 - 11259359
Alignment:
Q  7 aaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||| ||||| || || |||| |||||||| ||| |||||||||||||||||| ||||||||||||| |||||    
T  11259433 aaattgaatttagcatgttgtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgtt 11259359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 155
Target Start/End: Original strand, 13522391 - 13522457
Alignment:
Q  89 tagaatttattgtttgaatttagatgttaatgaagttagggttgtgaaaagaagttagagttttgaa 155  Q
    ||||||| ||||||  |||| |||||||||||||||||| ||| |||||||||||||| ||||||||    
T  13522391 tagaattgattgttgaaattaagatgttaatgaagttagagttttgaaaagaagttagggttttgaa 13522457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 24177790 - 24177847
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagtt 68  Q
    ||||||||| |||||||||||||||||| || |||||||||||||| ||||| |||||    
T  24177790 tggatttaataggtggtaggttgtagttttggaaatttgggaattatgtttaaaagtt 24177847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 35064610 - 35064658
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaatt 74  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  35064610 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 22306652 - 22306707
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||    
T  22306652 gtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgtt 22306707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 40812816 - 40812761
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| ||||||||||||| |||||    
T  40812816 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattgattgtt 40812761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 41172440 - 41172495
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||| ||||||||||||| |||||||||||||||||||    
T  41172440 gtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgtt 41172495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11885602 - 11885669
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttg 69  Q
    ||||||||||||||||||||| || ||||||||||||| ||  |||||| |||||||| ||| ||||||    
T  11885602 ttctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattagggttaaaagttg 11885669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 14641638 - 14641677
Alignment:
Q  46 tttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  14641638 tttgggaattaggtttagaagttgtaatttgttgatttaa 14641677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15413335 - 15413268
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    |||| |||||||||||||||| |||||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  15413335 ttctaaaaattggatttaacatgtggtaggttttagtttttgagaatttgggaattagggttaaaagt 15413268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 15931577 - 15931624
Alignment:
Q  27 taggttgtagttctgaaaatttgggaattaggtttagaagttgtaatt 74  Q
    |||||||||||| ||| ||||| |||||||||||| ||||||||||||    
T  15931577 taggttgtagttatgagaattttggaattaggtttcgaagttgtaatt 15931624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 17047109 - 17047054
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| |   ||||||||||||| |||| |||||||||||||||||||    
T  17047109 gtaggttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgtt 17047054  T

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Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17464082 - 17464015
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  17464082 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 17464015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 17539089 - 17539034
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||| |||||||||| |||| ||||||||||||||    
T  17539089 gtaggttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgtt 17539034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34160230 - 34160163
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  34160230 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 34160163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 44274401 - 44274346
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||  ||| |||||||||||||||||||    
T  44274401 gtaggttgtagttatgggaatttgggaattatattttgaagttgtaattggttgtt 44274346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45577699 - 45577766
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  45577699 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 45577766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 55477396 - 55477329
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  55477396 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 55477329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 17694050 - 17694001
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattg 75  Q
    ||||||||||||| || ||||||| ||||||| ||| |||||||||||||    
T  17694050 gtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattg 17694001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13151046 - 13151102
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaatta 56  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| |||||||||||||    
T  13151046 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatta 13151102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13153514 - 13153570
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaatta 56  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| |||||||||||||    
T  13153514 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaatta 13153570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 35354582 - 35354530
Alignment:
Q  29 ggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||| ||  ||||||| |||||||||| ||||||||||||| |||||    
T  35354582 ggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgtt 35354530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 2068 - 2155
Alignment:
Q  4 tgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtag 91  Q
    ||||||||| |||||||| || ||||||||||||| || |||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  2068 tgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaattaggtttataagttgtaattggttggtttaatagtag 2155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8650 - 8557
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttggg-aattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    |||||||||||| ||||||||||| ||||||||||||| ||  |||||||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  8650 ttctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttgatttaatagtagaa 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 40276 - 40361
Alignment:
Q  120 gaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||| || |||||||||||||| ||| |||||||||||||||||||||||||  ||||||||| ||||||||||| |||||    
T  40276 gaagttaggattttgaaaagaagttagggttgtgaaaagaagttagggttttgaattgaaatttgattcttgaaagtgtaagtaat 40361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 40248 - 40311
Alignment:
Q  111 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaa 174  Q
    |||||||  |||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||    
T  40248 gatgttatagaagttagggttttgaaaagaagttaggattttgaaaagaagttagggttgtgaa 40311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 81575 - 81501
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattg 75  Q
    |||| ||||||| ||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  81575 ttctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaattaggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 113017 - 113093
Alignment:
Q  6 aaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttt 82  Q
    ||||||| |||||||| || |||||||||| || ||  |||||||||||||||||||||||||||||||||||||||    
T  113017 aaaattgaatttaacaagttgtaggttgtaattttgggaatttgggaattaggtttagaagttgtaattggttgttt 113093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 117890 - 117926
Alignment:
Q  46 tttgggaattaggtttagaagttgtaattggttgttt 82  Q
    |||||||||||||||||||||||||||||||||||||    
T  117890 tttgggaattaggtttagaagttgtaattggttgttt 117926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3096 - 3188
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    |||||||||||| |||||||| || ||||||||||||| ||  ||||| ||||||||| |||||||||||||||||||| || ||| ||||||    
T  3096 ttctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaattagggttagaagttgtaattggttgattaaatggtagaa 3188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 135548 - 135640
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 93  Q
    |||||||||||| ||||||||||| ||||||||||||| ||  ||||||||||||||  |||||||||| ||||||||  |||||| ||||||    
T  135548 ttctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaattagagttagaagttgaaattggttaatttaatagtagaa 135640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1103 - 1187
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||||| |||||||| || |||||||| |||| ||| ||||||||| ||||| ||||||||||||||| |||| |||||    
T  1103 ttctgaaaattgaatttaacaagttgtaggttggagttttgagaatttgggatttagggttagaagttgtaattagttgatttaa 1187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 132 - 66
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  132 tttaacatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 12397 - 12323
Alignment:
Q  7 aaattggatttaaca-ggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 80  Q
    |||||| |||||||| ||| ||||||||||||| || ||||||| ||||||||||||||||||||||| ||||||    
T  12397 aaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 12219 - 12155
Alignment:
Q  139 gaagttagagttttgaaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaa 204  Q
    ||||||||||||||||||||||| |||||||||||||| ||| ||||||||| |||| ||||||||    
T  12219 gaagttagagttttgaaaagaagctagggttttgaatttcaaattgattgtt-aaagagtaggtaa 12155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 12253 - 12184
Alignment:
Q  86 ttgtagaatttattgtttgaatttagatgttaatgaagttagggttgtgaaaagaagttagagttttgaa 155  Q
    |||||||||| |||||| ||||| |||||||||||||||||| ||| |||||||||| ||| ||||||||    
T  12253 ttgtagaattgattgttggaattaagatgttaatgaagttagagttttgaaaagaagctagggttttgaa 12184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28373 - 28451
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    ||||||||||||||||||||| || ||||||||||||| ||  ||||||| ||||||| |||||||||| || ||||||    
T  28373 ttctgaaaattggatttaacaagttgtaggttgtagttttgggaatttggaaattagggttagaagttgcaaatggttg 28451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 28467 - 28515
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  28467 agaagttagggttttgaattgcaatttgattgttgaaggtgtaggtaat 28515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 158866 - 158944
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    |||| |||||||||||||||| || ||||||||||||| ||  ||||||||||||||| |||||||||| || ||||||    
T  158866 ttctaaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 158944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 16667 - 16715
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  16667 agaagttagggttttaaattgcaatttgattgttcaaagtgtaggtaat 16715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 18950 - 18999
Alignment:
Q  157 agaagttagggttttgaa-ttacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||    
T  18950 agaagttagggtttttaaattgcaatttgattgttgaaagtgtaggtaat 18999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20130 - 20202
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaatt 74  Q
    |||||||||||| ||||||||||| ||||||| ||||| ||  ||||||||||||| |||||||||||||||||    
T  20130 ttctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaattatgtttagaagttgtaatt 20202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 10809 - 10888
Alignment:
Q  11 tggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaattgtaga 92  Q
    |||||||||||||| ||||||| ||||| ||  ||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  10809 tggatttaacaggttgtaggtt-tagtt-tgggaatttgggaattagggttagaagttgtaattggttgttgtaatagtaga 10888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 5124 - 5156
Alignment:
Q  46 tttgggaattaggtttagaagttgtaattggtt 78  Q
    ||||||||||||| |||||||||||||||||||    
T  5124 tttgggaattagggttagaagttgtaattggtt 5156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 4685 - 4605
Alignment:
Q  6 aaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgttttaat 86  Q
    ||||||| |||||||||||  |||||||| ||| ||  |||||| |||||||||||||||||||||||| |||| ||||||    
T  4685 aaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgtaattagttggtttaat 4605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 537 - 592
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  537 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 501 - 446
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||| ||||||| |||||||||| |||||||||||||||||||    
T  501 gtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgtt 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 2547 - 2492
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  2547 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 2492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 3165 - 3110
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  3165 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 3110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31116 - 31046
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaa 72  Q
    ||||||||||||||||||||| || ||||||||||||| ||  ||||||||||||||| ||| |||||||||    
T  31116 ttctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgggaattagggttaaaagttgtaa 31046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 26655 - 26604
Alignment:
Q  154 aaaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  26655 aaaagaagttagggttttgaattgcaatttgattcttgaaagtgtaagtaat 26604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 561 - 613
Alignment:
Q  8 aattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtt 60  Q
    |||||||||||||| || ||||||||||||| |||  ||||| ||||||||||    
T  561 aattggatttaacatgttgtaggttgtagttttgaggatttgagaattaggtt 613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 23573 - 23526
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||| |||| ||||||||||| |||||| ||||||||||||||    
T  23573 agaagttagg-ttttaaattacaattttattgttaaaagtgtaggtaat 23526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 754 - 820
Alignment:
Q  15 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||| || ||||||||||||| ||  |||||||||||||||||| |||||||||||| ||||||    
T  754 tttaacatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgtt 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 1147 - 1093
Alignment:
Q  27 taggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  1147 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 12603 - 12657
Alignment:
Q  27 taggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  12603 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 12657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 5366 - 5311
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| ||||| |||||||||||||    
T  5366 gtaggttgtagttatgggaatttgggaattaggttttgaagtcgtaattggttgtt 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 21843 - 21917
Alignment:
Q  7 aaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||| ||||| || || |||||||||| || ||  |||||||||||||||||| |||||||||||||||||||    
T  21843 aaattgaatttagcatgttgtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgtt 21917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 328364 - 328414
Alignment:
Q  31 ttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||||    
T  328364 ttgtagttatggaaatttgggaattaggtttcgaagttgtaattggttgtt 328414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 72909 - 72872
Alignment:
Q  44 aatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  72909 aatttgtgaattaggttttgaagttgtaattggttgtt 72872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 110181 - 110113
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttg 69  Q
    |||||||||||| |||||||| || ||||||||||||| ||   ||||| | ||||||||||| |||||    
T  110181 ttctgaaaattgaatttaacaagttgtaggttgtagttttggggatttgaggattaggtttaggagttg 110113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 31976 - 31922
Alignment:
Q  27 taggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  31976 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 31922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 37283 - 37229
Alignment:
Q  27 taggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  37283 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 37229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 77670 - 77615
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||| ||||||||||| ||||||||||| |||||||    
T  77670 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgtt 77615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 67128 - 67043
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagtt-gtaattggttgttttaa 85  Q
    |||||||||||||||||||||  | ||||||||||||| |   ||||||||||| ||||||||||||| | ||||||||| |||||    
T  67128 ttctgaaaattggatttaacaaattgtaggttgtagttttaggaatttgggaataaggtttagaagttggaaattggttggtttaa 67043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 35602 - 35650
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  35602 agaagttagggttttgaattgcaatttgattgttgaaggtgtagataat 35650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35508 - 35586
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| ||||||||  | ||||||||||||| ||  ||||||||||||| | |||||||||| || ||||||    
T  35508 ttctgaaaattgaatttaacaacttgtaggttgtagttttgggaatttgggaattaaggttagaagttgcaaatggttg 35586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 38534 - 38581
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  38534 agaagttagg-ttttaaattacaatttgattgttgaaagtgtaggtaat 38581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 1188 - 1133
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| |   |||||||||||||||||| |||||||||||||||||||    
T  1188 gtaggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgtt 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 4783 - 4838
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||| |||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  4783 gtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 4838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5862 - 5941
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgg-gaattaggtttagaagttgtaattggttg 79  Q
    ||||||||||||||||| |||||| || |||||||||| | | |||||||  ||||||| |||||||||| |||||||||    
T  5862 ttctgaaaattggatttgacaggttgtgggttgtagttttcagaatttggaaaattagggttagaagttgaaattggttg 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 11343 - 11398
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||||||||| |||| |||||||||||||||||||    
T  11343 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 11398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 18731 - 18770
Alignment:
Q  46 tttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  18731 tttgggaattaggtttagaagttgtaattggttgatttaa 18770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 13354 - 13307
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaa 204  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||    
T  13354 agaagttagggttttgaattgcaatttgattgttgaagatgtaggtaa 13307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13448 - 13370
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttg 79  Q
    |||||||||||| |||||||| || |||||||| |||| ||  ||||||||||||||| ||| |||||| || ||||||    
T  13448 ttctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttgggaattagggttaaaagttgcaaatggttg 13370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 13911 - 13872
Alignment:
Q  46 tttgggaattaggtttagaagttgtaattggttgttttaa 85  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  13911 tttgggaattaggtttagaagttgtaattggttgatttaa 13872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19961 - 19924
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagtt 38  Q
    ||||||||||||||||||||| || |||||||||||||    
T  19961 ttctgaaaattggatttaacaagttgtaggttgtagtt 19924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 13461 - 13516
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| |||||| ||||||||||||    
T  13461 gtaggttgtagttttgggaatttgggaattaggttttgaagttataattggttgtt 13516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7284 - 7205
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaa-ttaggtttagaagttgtaattggttg 79  Q
    ||||||||||||||||| ||| || ||||||| ||||| ||  ||||||| || ||||| ||||||||||||||||||||    
T  7284 ttctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaattagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 34322 - 34267
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  ||||||||||| |||||| |||||||||||||||||||    
T  34322 gtaggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgtt 34267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 58729 - 58674
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||| ||||||||||| |||||||||||||||||||    
T  58729 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 58674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 18201 - 18251
Alignment:
Q  155 aaagaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||| |||||    
T  18201 aaagaagttagggttttgaattgtaatttgattattgaaagtgtaagtaat 18251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 7314 - 7346
Alignment:
Q  155 aaagaagttagggttttgaattacaatttgatt 187  Q
    |||||||||||||||||||||| ||||||||||    
T  7314 aaagaagttagggttttgaattgcaatttgatt 7346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 567 - 521
Alignment:
Q  157 agaagttagggttttgaattacaatttgattgttgaaagtgtaggtaat 205  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  567 agaagttagg--tttgaattgcaatttgattgttgaaagtgtaggtaat 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 11355 - 11318
Alignment:
Q  44 aatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11355 aatttgggaattaggttttgaagttgtaattggttgtt 11318  T

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Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 5235 - 5198
Alignment:
Q  44 aatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  5235 aatttgggaattacgttttgaagttgtaattggttgtt 5198  T

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Target: scaffold0802 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4754 - 4830
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggt 77  Q
    |||||||||||| |||||||| || |||||||| ||||     ||||||| ||||||||||||||||||| ||||||    
T  4754 ttctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaattaggtttagaagttgtcattggt 4830  T

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Target: scaffold0134 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38726 - 38659
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  38726 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 38659  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 95315 - 95248
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  95315 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 95248  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 143594 - 143539
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| |   ||||||||||||| |||| |||||||||||||||||||    
T  143594 gtaggttgtagttattttaatttgggaattatgttttgaagttgtaattggttgtt 143539  T

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Target: scaffold0020; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 169068 - 169123
Alignment:
Q  26 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||| ||  |||||||||||||||||| ||| |||||||| ||||||    
T  169068 gtaggttgtagttatgggaatttgggaattaggttttgaacttgtaattagttgtt 169123  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 158689 - 158622
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtag-ttctgaaaatttgggaattaggtttagaagt 67  Q
    ||||||||||||||||||||| || ||||||| ||| || ||| ||||||||||||||| ||| ||||    
T  158689 ttctgaaaattggatttaacatgttgtaggttttagtttttgagaatttgggaattagggttaaaagt 158622  T

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Target: scaffold0285 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 19726 - 19689
Alignment:
Q  44 aatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  19726 aatttgggaattaggtttttaagttgtaattggttgtt 19689  T

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Target: scaffold0232 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4233 - 4176
Alignment:
Q  1 ttctgaaaattggatttaacaggtggtaggttgtagttctgaaaatttgggaattagg 58  Q
    ||||||||||||||||||| | || ||| ||| ||||| ||| |||||||||||||||    
T  4233 ttctgaaaattggatttaatatgttgtaagttttagttttgagaatttgggaattagg 4176  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 35457 - 35420
Alignment:
Q  44 aatttgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  35457 aatttgggaattaggttttgaagtcgtaattggttgtt 35420  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 79025 - 78992
Alignment:
Q  48 tgggaattaggtttagaagttgtaattggttgtt 81  Q
    |||||||||||||| |||||||||||||||||||    
T  79025 tgggaattaggttttgaagttgtaattggttgtt 78992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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