View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8216_low_5 (Length: 361)
Name: NF8216_low_5
Description: NF8216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8216_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 22 - 354
Target Start/End: Original strand, 32802590 - 32802924
Alignment:
| Q |
22 |
tgtatatcctgaaagcttattttgtggcttggaaagatggaccaagaagtgagctaaggaatattggaggaagagcattgtaatttatatgctctttgct |
121 |
Q |
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| T |
32802590 |
tgtatatcctgaaagcttattttgtggcttggaaagatggaccaagaagtgagctaaggaatattggaggaagagcattgtaatttatatgctctttgct |
32802689 |
T |
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| Q |
122 |
tttttatttgagtttgacgtttttgactcaataattaatctctattgcttaaactatgtatgggattgtccaagtttatctctattaagtaagtgtatgc |
221 |
Q |
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| T |
32802690 |
tttttatttgagtttgacgtttttgactcaataattaatctctattgcttaaattatgtatgggattgtccaagtttatctctattaagtaagtgtatgc |
32802789 |
T |
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| Q |
222 |
ttatgcatatatagtaaattatttatttgttatgcttaactaaataattaacttgtttgtaatttctatgatcccattttctaaccagactttgatgttt |
321 |
Q |
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| T |
32802790 |
ttatgcatatatagtaaattatatatttgttatgcttaactaaataattaacttatttgtaatttctatgatcccattttctaaccagactttgatgttt |
32802889 |
T |
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| Q |
322 |
ttgacataatgat--atttacaataaaacacgaaa |
354 |
Q |
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||||||||||||| |||||||||||||||||||| |
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| T |
32802890 |
ttgacataatgataaatttacaataaaacacgaaa |
32802924 |
T |
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