View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8216_low_7 (Length: 240)
Name: NF8216_low_7
Description: NF8216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8216_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 28405598 - 28405376
Alignment:
| Q |
1 |
tgaaagctctaaaggtgggtcaaaatcaggctttgaagcgttgaccaaccaacaatctaaaagaagatcagcttcccttataccacaagtagtataatca |
100 |
Q |
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| T |
28405598 |
tgaaagctctaaaggtgggtcaaaatcaggctttgaagcgttgaccaaccaacaatctaaaagaagatcagcttcccttataccacaagtagtataatca |
28405499 |
T |
|
| Q |
101 |
gaagaagcaattgccataaagccataacctttaggaaccaaagatgaattcaaattaccccaacattcaatcacatgattatcctctcgaacaccacaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28405498 |
gaagaagcaattgccataaagccataacctttaggaaccaaagatgaattcaaattaccccaacattcaatcacatgattatcctctcgaacaccacaaa |
28405399 |
T |
|
| Q |
201 |
aatggcgcgcccctccagaaagg |
223 |
Q |
| |
|
|||| |||||||||||||||||| |
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| T |
28405398 |
aatgacgcgcccctccagaaagg |
28405376 |
T |
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