View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8220_low_6 (Length: 374)

Name: NF8220_low_6
Description: NF8220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8220_low_6
NF8220_low_6
[»] chr7 (57 HSPs)
chr7 (16-360)||(40255834-40256177)
chr7 (239-360)||(36623307-36623428)
chr7 (239-360)||(47156026-47156147)
chr7 (240-360)||(28061657-28061777)
chr7 (240-363)||(41897988-41898111)
chr7 (240-360)||(32431500-32431620)
chr7 (240-360)||(16778505-16778625)
chr7 (240-360)||(20885103-20885223)
chr7 (240-360)||(38851989-38852109)
chr7 (250-360)||(7438913-7439023)
chr7 (247-360)||(42890485-42890598)
chr7 (238-362)||(7457862-7457985)
chr7 (240-360)||(25566690-25566809)
chr7 (240-360)||(40090060-40090180)
chr7 (240-360)||(48602436-48602556)
chr7 (246-360)||(36585115-36585229)
chr7 (255-360)||(44732027-44732132)
chr7 (250-360)||(11502722-11502832)
chr7 (240-340)||(46322127-46322227)
chr7 (240-360)||(46103512-46103625)
chr7 (249-360)||(8683827-8683935)
chr7 (247-360)||(30342081-30342194)
chr7 (247-360)||(39130068-39130181)
chr7 (240-360)||(35117126-35117245)
chr7 (240-360)||(42877386-42877506)
chr7 (249-360)||(46479838-46479949)
chr7 (247-356)||(6174843-6174952)
chr7 (247-360)||(3851084-3851194)
chr7 (240-360)||(6766692-6766812)
chr7 (238-357)||(41088585-41088704)
chr7 (247-360)||(41134630-41134738)
chr7 (250-360)||(5788519-5788629)
chr7 (249-359)||(36341629-36341739)
chr7 (247-356)||(7169133-7169242)
chr7 (240-360)||(2198602-2198722)
chr7 (247-338)||(42662194-42662284)
chr7 (246-356)||(26161602-26161712)
chr7 (247-360)||(4131645-4131758)
chr7 (247-360)||(27045550-27045663)
chr7 (239-358)||(35570193-35570317)
chr7 (313-360)||(21379817-21379864)
chr7 (288-356)||(34750550-34750618)
chr7 (296-359)||(38767202-38767265)
chr7 (240-320)||(45331915-45331992)
chr7 (247-356)||(5529018-5529127)
chr7 (313-353)||(23707572-23707612)
chr7 (298-353)||(37467456-37467511)
chr7 (298-360)||(3785578-3785640)
chr7 (285-359)||(31466402-31466476)
chr7 (247-360)||(49110612-49110725)
chr7 (308-360)||(49101955-49102007)
chr7 (296-359)||(36515895-36515958)
chr7 (297-359)||(47525979-47526042)
chr7 (285-359)||(44479765-44479839)
chr7 (247-338)||(2952429-2952521)
chr7 (296-356)||(16870626-16870686)
chr7 (313-353)||(19120679-19120719)
[»] chr1 (44 HSPs)
chr1 (239-360)||(16120582-16120703)
chr1 (247-360)||(30003540-30003653)
chr1 (240-360)||(6402552-6402672)
chr1 (240-360)||(11641209-11641329)
chr1 (240-360)||(40771914-40772034)
chr1 (247-360)||(9342787-9342900)
chr1 (251-360)||(36757628-36757737)
chr1 (240-356)||(6766372-6766488)
chr1 (240-360)||(30701718-30701838)
chr1 (246-360)||(40977630-40977744)
chr1 (230-360)||(42788684-42788814)
chr1 (247-360)||(36399105-36399218)
chr1 (240-360)||(17305954-17306074)
chr1 (240-360)||(52024026-52024146)
chr1 (246-356)||(27292646-27292756)
chr1 (240-360)||(24321259-24321381)
chr1 (246-360)||(26910082-26910196)
chr1 (247-360)||(42735307-42735423)
chr1 (253-360)||(15912478-15912585)
chr1 (249-359)||(28030824-28030934)
chr1 (240-356)||(4302118-4302234)
chr1 (256-352)||(48375018-48375114)
chr1 (240-359)||(44647856-44647975)
chr1 (286-356)||(42367442-42367512)
chr1 (243-360)||(15382568-15382685)
chr1 (251-356)||(38153423-38153528)
chr1 (240-360)||(40800529-40800649)
chr1 (240-347)||(44644510-44644617)
chr1 (297-360)||(22575729-22575792)
chr1 (250-360)||(3485349-3485459)
chr1 (298-356)||(30385291-30385349)
chr1 (303-360)||(31444986-31445043)
chr1 (283-359)||(9881319-9881395)
chr1 (298-360)||(14777090-14777152)
chr1 (326-360)||(25171240-25171274)
chr1 (248-359)||(50972777-50972892)
chr1 (247-356)||(27984563-27984671)
chr1 (276-359)||(52379132-52379215)
chr1 (310-360)||(7568628-7568678)
chr1 (247-348)||(25695404-25695508)
chr1 (285-359)||(37281235-37281309)
chr1 (247-352)||(34634914-34635019)
chr1 (286-360)||(16689870-16689941)
chr1 (291-359)||(50539403-50539471)
[»] chr6 (43 HSPs)
chr6 (240-360)||(4147931-4148051)
chr6 (240-360)||(22054772-22054892)
chr6 (240-360)||(18668830-18668950)
chr6 (240-360)||(19088100-19088220)
chr6 (240-360)||(24624083-24624203)
chr6 (240-360)||(32414821-32414941)
chr6 (250-360)||(17257793-17257903)
chr6 (247-360)||(15383072-15383185)
chr6 (240-360)||(6563226-6563346)
chr6 (240-360)||(32671816-32671936)
chr6 (250-360)||(20226440-20226550)
chr6 (250-360)||(22120424-22120534)
chr6 (247-360)||(3989406-3989518)
chr6 (239-360)||(25475955-25476071)
chr6 (240-360)||(17213926-17214046)
chr6 (248-353)||(31569175-31569280)
chr6 (270-360)||(1040854-1040944)
chr6 (247-360)||(10520475-10520588)
chr6 (247-360)||(20437155-20437269)
chr6 (268-360)||(24955538-24955630)
chr6 (251-360)||(28477764-28477873)
chr6 (240-360)||(12225975-12226095)
chr6 (250-360)||(15337498-15337608)
chr6 (250-360)||(29790216-29790326)
chr6 (241-359)||(4440851-4440969)
chr6 (251-357)||(29693894-29694000)
chr6 (251-356)||(21540775-21540880)
chr6 (245-356)||(31869713-31869824)
chr6 (249-359)||(17155158-17155268)
chr6 (296-360)||(23158051-23158115)
chr6 (298-356)||(3623856-3623913)
chr6 (286-353)||(19240741-19240808)
chr6 (298-360)||(2360048-2360110)
chr6 (304-356)||(8101664-8101716)
chr6 (313-360)||(5495322-5495369)
chr6 (297-356)||(10298719-10298778)
chr6 (300-358)||(1260490-1260548)
chr6 (285-359)||(18992046-18992120)
chr6 (240-283)||(16193057-16193100)
chr6 (240-274)||(32420748-32420782)
chr6 (249-350)||(14214065-14214166)
chr6 (331-360)||(16193024-16193053)
chr6 (240-268)||(13757208-13757236)
[»] chr8 (42 HSPs)
chr8 (240-360)||(42587390-42587510)
chr8 (239-360)||(40494383-40494504)
chr8 (240-360)||(616783-616903)
chr8 (240-360)||(623176-623296)
chr8 (246-360)||(14237286-14237400)
chr8 (246-360)||(32998456-32998570)
chr8 (247-360)||(18044432-18044545)
chr8 (239-360)||(41263809-41263930)
chr8 (246-357)||(3100640-3100751)
chr8 (238-360)||(132015-132137)
chr8 (246-360)||(2766190-2766304)
chr8 (247-360)||(35403523-35403636)
chr8 (251-360)||(13216863-13216972)
chr8 (240-360)||(36642000-36642121)
chr8 (240-353)||(5878317-5878429)
chr8 (247-360)||(38957177-38957290)
chr8 (246-358)||(4270236-4270348)
chr8 (240-360)||(8394346-8394466)
chr8 (247-360)||(22489415-22489529)
chr8 (247-342)||(24524107-24524202)
chr8 (250-360)||(11637792-11637902)
chr8 (240-346)||(36167076-36167182)
chr8 (247-359)||(6414108-6414220)
chr8 (240-360)||(33700215-33700336)
chr8 (246-360)||(38497089-38497192)
chr8 (247-304)||(13217219-13217276)
chr8 (270-360)||(3370398-3370488)
chr8 (246-360)||(18035106-18035220)
chr8 (249-359)||(18090338-18090447)
chr8 (271-356)||(5173282-5173367)
chr8 (313-360)||(40716665-40716712)
chr8 (296-360)||(40204864-40204928)
chr8 (293-359)||(1580817-1580883)
chr8 (285-359)||(3293145-3293219)
chr8 (285-359)||(6470988-6471062)
chr8 (285-359)||(30380673-30380747)
chr8 (326-360)||(32855604-32855638)
chr8 (285-359)||(40013794-40013868)
chr8 (300-353)||(10982639-10982692)
chr8 (302-359)||(24729917-24729974)
chr8 (308-360)||(9632223-9632275)
chr8 (240-268)||(41305762-41305790)
[»] chr2 (39 HSPs)
chr2 (240-360)||(44365157-44365277)
chr2 (235-360)||(8042164-8042289)
chr2 (240-360)||(19141208-19141328)
chr2 (240-356)||(39358146-39358262)
chr2 (246-360)||(5405002-5405116)
chr2 (238-360)||(7608047-7608169)
chr2 (240-356)||(2183103-2183219)
chr2 (254-360)||(11841735-11841841)
chr2 (247-360)||(6223073-6223186)
chr2 (240-360)||(7799847-7799967)
chr2 (238-356)||(36072172-36072290)
chr2 (246-353)||(19262686-19262793)
chr2 (242-360)||(32774593-32774711)
chr2 (251-360)||(33607387-33607492)
chr2 (247-360)||(36719466-36719573)
chr2 (245-360)||(11931696-11931811)
chr2 (286-360)||(13125287-13125361)
chr2 (290-360)||(9172288-9172358)
chr2 (251-353)||(43444689-43444791)
chr2 (275-360)||(44644905-44644990)
chr2 (247-360)||(24251967-24252079)
chr2 (251-347)||(9006939-9007035)
chr2 (255-359)||(16865069-16865173)
chr2 (272-360)||(22839069-22839157)
chr2 (296-360)||(38292008-38292072)
chr2 (251-359)||(24093679-24093788)
chr2 (296-359)||(13117467-13117530)
chr2 (303-358)||(38839136-38839191)
chr2 (271-356)||(36177723-36177809)
chr2 (298-356)||(42133810-42133868)
chr2 (247-360)||(19165925-19166037)
chr2 (286-360)||(31610795-31610869)
chr2 (297-355)||(31904027-31904085)
chr2 (246-322)||(13598448-13598523)
chr2 (296-359)||(9553864-9553926)
chr2 (276-359)||(14372220-14372303)
chr2 (285-359)||(7442935-7443009)
chr2 (313-357)||(4835728-4835772)
chr2 (237-269)||(11841590-11841622)
[»] chr4 (69 HSPs)
chr4 (237-360)||(25296722-25296845)
chr4 (240-360)||(26169986-26170106)
chr4 (240-360)||(38416792-38416912)
chr4 (240-360)||(54330832-54330952)
chr4 (240-365)||(35381031-35381156)
chr4 (247-360)||(44232219-44232332)
chr4 (239-360)||(55209716-55209837)
chr4 (240-360)||(29830343-29830463)
chr4 (240-360)||(35686373-35686493)
chr4 (240-360)||(47386428-47386548)
chr4 (250-360)||(12240320-12240430)
chr4 (239-356)||(2760873-2760990)
chr4 (247-360)||(43967730-43967843)
chr4 (240-360)||(17610280-17610400)
chr4 (240-359)||(38716887-38717005)
chr4 (243-360)||(12625254-12625371)
chr4 (239-360)||(26125707-26125828)
chr4 (240-360)||(31010214-31010334)
chr4 (247-360)||(25918210-25918323)
chr4 (246-347)||(55800840-55800941)
chr4 (240-360)||(19433500-19433624)
chr4 (249-360)||(50205752-50205863)
chr4 (246-360)||(17446775-17446889)
chr4 (246-360)||(55191830-55191944)
chr4 (247-356)||(50620828-50620937)
chr4 (270-360)||(45291862-45291952)
chr4 (264-360)||(4467661-4467756)
chr4 (247-360)||(9029591-9029707)
chr4 (240-357)||(54610862-54610980)
chr4 (247-359)||(36523111-36523223)
chr4 (237-360)||(27407759-27407884)
chr4 (267-360)||(19595732-19595825)
chr4 (250-350)||(3036990-3037090)
chr4 (240-359)||(38721337-38721456)
chr4 (247-360)||(7614622-7614735)
chr4 (247-360)||(39307703-39307816)
chr4 (240-359)||(5428578-5428695)
chr4 (251-353)||(2571031-2571133)
chr4 (296-360)||(14144599-14144663)
chr4 (249-360)||(30446307-30446417)
chr4 (247-360)||(34323076-34323191)
chr4 (245-341)||(34652208-34652304)
chr4 (251-346)||(25101731-25101826)
chr4 (251-359)||(27755730-27755842)
chr4 (296-359)||(50181116-50181179)
chr4 (256-358)||(56297846-56297948)
chr4 (247-351)||(29051691-29051793)
chr4 (240-360)||(37767100-37767220)
chr4 (298-360)||(19903792-19903854)
chr4 (251-356)||(23360189-23360291)
chr4 (326-361)||(34652157-34652192)
chr4 (285-359)||(7738863-7738937)
chr4 (298-360)||(20875389-20875451)
chr4 (286-360)||(32871501-32871575)
chr4 (294-356)||(34316575-34316636)
chr4 (285-359)||(46212394-46212468)
chr4 (298-360)||(55091329-55091391)
chr4 (276-359)||(5735414-5735497)
chr4 (313-356)||(10550499-10550542)
chr4 (313-360)||(27344090-27344137)
chr4 (276-359)||(47579429-47579512)
chr4 (276-359)||(49768588-49768671)
chr4 (285-359)||(3443431-3443505)
chr4 (285-359)||(4264277-4264351)
chr4 (285-359)||(5123201-5123275)
chr4 (296-350)||(53304481-53304535)
chr4 (239-268)||(20249261-20249290)
chr4 (313-350)||(51456506-51456543)
chr4 (297-360)||(50685339-50685403)
[»] chr3 (49 HSPs)
chr3 (239-360)||(13499477-13499598)
chr3 (239-360)||(21797555-21797676)
chr3 (240-360)||(42490338-42490458)
chr3 (239-360)||(42761625-42761746)
chr3 (240-360)||(27010616-27010736)
chr3 (240-360)||(33415799-33415919)
chr3 (240-360)||(39866283-39866403)
chr3 (247-360)||(27334873-27334986)
chr3 (246-358)||(34912286-34912398)
chr3 (240-360)||(20765196-20765316)
chr3 (240-360)||(43467884-43468004)
chr3 (239-360)||(19823899-19824014)
chr3 (240-360)||(21005293-21005413)
chr3 (251-360)||(33803532-33803642)
chr3 (246-360)||(54507647-54507761)
chr3 (248-360)||(6910342-6910454)
chr3 (240-360)||(36227545-36227665)
chr3 (286-360)||(30213850-30213924)
chr3 (247-360)||(43181497-43181611)
chr3 (245-360)||(38137829-38137944)
chr3 (249-359)||(44561793-44561903)
chr3 (247-329)||(45613580-45613662)
chr3 (245-356)||(25527411-25527520)
chr3 (250-360)||(15332948-15333058)
chr3 (239-360)||(48334663-48334783)
chr3 (271-360)||(52167240-52167329)
chr3 (250-356)||(41252909-41253015)
chr3 (294-359)||(44856400-44856465)
chr3 (296-356)||(3430420-3430480)
chr3 (299-360)||(41751552-41751613)
chr3 (246-360)||(22786636-22786748)
chr3 (247-307)||(32220870-32220930)
chr3 (298-360)||(17643789-17643851)
chr3 (296-358)||(33128063-33128125)
chr3 (246-360)||(22782272-22782384)
chr3 (240-356)||(23940508-23940624)
chr3 (251-359)||(30057310-30057418)
chr3 (255-359)||(42469610-42469713)
chr3 (276-359)||(1327455-1327538)
chr3 (276-359)||(18659195-18659278)
chr3 (298-352)||(23224306-23224361)
chr3 (302-360)||(15568077-15568135)
chr3 (285-359)||(21907139-21907213)
chr3 (302-351)||(3017853-3017902)
chr3 (239-268)||(44276774-44276803)
chr3 (296-356)||(47164598-47164659)
chr3 (286-358)||(19327474-19327546)
chr3 (297-345)||(27813445-27813493)
chr3 (248-324)||(32273718-32273794)
[»] chr5 (39 HSPs)
chr5 (240-360)||(978077-978197)
chr5 (240-360)||(8086172-8086292)
chr5 (246-360)||(14634299-14634413)
chr5 (240-360)||(18094223-18094343)
chr5 (240-360)||(33387220-33387340)
chr5 (250-360)||(33587611-33587721)
chr5 (240-360)||(9502769-9502889)
chr5 (240-360)||(40156198-40156318)
chr5 (249-360)||(3472419-3472530)
chr5 (249-360)||(30355016-30355127)
chr5 (240-360)||(11785867-11785988)
chr5 (240-353)||(34111962-34112075)
chr5 (252-356)||(11251126-11251230)
chr5 (239-360)||(24992280-24992401)
chr5 (250-360)||(7224175-7224285)
chr5 (240-356)||(38916396-38916512)
chr5 (239-360)||(9050718-9050828)
chr5 (240-352)||(20692541-20692651)
chr5 (240-360)||(27109689-27109808)
chr5 (292-360)||(12447560-12447626)
chr5 (251-356)||(39776641-39776746)
chr5 (240-360)||(12007774-12007894)
chr5 (247-360)||(24916388-24916503)
chr5 (299-360)||(11761125-11761186)
chr5 (250-353)||(27579579-27579681)
chr5 (286-357)||(32017259-32017330)
chr5 (313-360)||(32400400-32400447)
chr5 (250-316)||(18598554-18598620)
chr5 (298-360)||(18998745-18998807)
chr5 (271-360)||(12456782-12456871)
chr5 (286-357)||(3422355-3422429)
chr5 (297-360)||(26387021-26387084)
chr5 (285-359)||(5212966-5213040)
chr5 (297-342)||(37495667-37495712)
chr5 (296-359)||(10822238-10822301)
chr5 (313-360)||(12359963-12360010)
chr5 (285-359)||(4924882-4924956)
chr5 (241-299)||(12448275-12448333)
chr5 (285-359)||(32002058-32002132)
[»] scaffold0003 (1 HSPs)
scaffold0003 (240-360)||(161979-162099)
[»] scaffold0022 (1 HSPs)
scaffold0022 (240-360)||(100789-100909)
[»] scaffold0018 (1 HSPs)
scaffold0018 (249-360)||(67911-68022)
[»] scaffold0295 (2 HSPs)
scaffold0295 (240-360)||(13859-13979)
scaffold0295 (240-301)||(9372-9433)
[»] scaffold0056 (1 HSPs)
scaffold0056 (239-360)||(70960-71080)
[»] scaffold0225 (1 HSPs)
scaffold0225 (247-360)||(8975-9088)
[»] scaffold0029 (1 HSPs)
scaffold0029 (271-360)||(138172-138261)
[»] scaffold0099 (1 HSPs)
scaffold0099 (239-356)||(28798-28917)
[»] scaffold0262 (1 HSPs)
scaffold0262 (247-360)||(22787-22900)
[»] scaffold0595 (1 HSPs)
scaffold0595 (297-353)||(4005-4061)
[»] scaffold0608 (1 HSPs)
scaffold0608 (296-359)||(1576-1639)
[»] scaffold0009 (2 HSPs)
scaffold0009 (247-360)||(217017-217131)
scaffold0009 (296-360)||(53562-53626)
[»] scaffold0366 (2 HSPs)
scaffold0366 (285-359)||(14202-14276)
scaffold0366 (285-359)||(10536-10610)
[»] scaffold0459 (1 HSPs)
scaffold0459 (285-359)||(12895-12969)
[»] scaffold1431 (1 HSPs)
scaffold1431 (240-268)||(148-176)
[»] scaffold0051 (1 HSPs)
scaffold0051 (283-359)||(41259-41335)


Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 16 - 360
Target Start/End: Original strand, 40255834 - 40256177
Alignment:
Q  16 aagagcattgtttcattttgctattacaaacaaccagaaaatgaggcaacagtaggaaggannnnnnnnctaccctctaaatttttaattgaggagggga 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| ||||||||||||||    
T  40255834 aagagcattgtttcattttgctattacaaacaaccagaaaatgaggcaacagtaggaaggattttttttctaccctctaaatttt-aattgaggagggga 40255932  T
Q  116 gtctcaaatcagaggtgagtaaagtttgtcgaggattgttttagccaaaatttgaacttggattctactnnnnnnntattcattaactcaaaattgatta 215  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| ||||||||||||||||    
T  40255933 gtctcagatcagaggtgagtaaagtttgtcgaggattgttttagccaaaatttgaacttggattctactaaaaaaatattcatcaactcaaaattgatta 40256032  T
Q  216 acaatttttgttcgatcactttgttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatacttt 315  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  40256033 acaatttttgttcgatcactttgttattctctccgtttcaaaatacatgtccaatttttgcaatgtgctctattcacttgacttactttgaccatacttt 40256132  T
Q  316 ttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40256133 ttaactaatgtataaatacaaatattagcatgtaagatgttgttt 40256177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 239 - 360
Target Start/End: Original strand, 36623307 - 36623428
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36623307 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 36623406  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  36623407 attagcatgtaagatgttgttt 36623428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 239 - 360
Target Start/End: Original strand, 47156026 - 47156147
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47156026 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 47156125  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  47156126 attagcatgtaagatgttgttt 47156147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 28061777 - 28061657
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28061777 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 28061678  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  28061677 ttagcatgtaagatgttgttt 28061657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 240 - 363
Target Start/End: Original strand, 41897988 - 41898111
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  41897988 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaata 41898087  T
Q  340 ttagcatgtaagatgttgtttcat 363  Q
    ||||||||||||||||||||||||    
T  41898088 ttagcatgtaagatgttgtttcat 41898111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 32431620 - 32431500
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32431620 tactccctccgtttcaaaatatatgtcaaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 32431521  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||| ||||||||||||||||    
T  32431520 ttagtatgtaagatgttgttt 32431500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 16778505 - 16778625
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  16778505 tactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaaata 16778604  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  16778605 ttagcatgtaagatgttgttt 16778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 20885103 - 20885223
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20885103 tactccctccgtttcaaaatacatgtccaatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 20885202  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  20885203 ttagcatgtaagatgttgttt 20885223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 38852109 - 38851989
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38852109 tactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 38852010  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||| ||||||    
T  38852009 ttagcatgtaagatattgttt 38851989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 7438913 - 7439023
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7438913 gtttcaaaatacatgtctaatttttgcaatatgcattattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgta 7439012  T
Q  350 agatgttgttt 360  Q
    |||||||||||    
T  7439013 agatgttgttt 7439023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 42890598 - 42890485
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  42890598 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaatattagcat 42890499  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  42890498 gtaagatgttgttt 42890485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 362
Target Start/End: Complemental strand, 7457985 - 7457862
Alignment:
Q  238 gttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaa 337  Q
    |||||||  |||||||||||||||||||| || |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7457985 gttactccatccgtttcaaaatacatgtctaagttttgcaatgtgcactattcactt-acttactttgaccatactttttaactaatgtataaatacaaa 7457887  T
Q  338 tattagcatgtaagatgttgtttca 362  Q
    |||||||||||||||||||||||||    
T  7457886 tattagcatgtaagatgttgtttca 7457862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 25566809 - 25566690
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  25566809 tactctctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtat-aatacaaata 25566711  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    ||||||||| |||||||||||    
T  25566710 ttagcatgtgagatgttgttt 25566690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 40090180 - 40090060
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| |||||| ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40090180 tactccctccgttttaaaatatatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 40090081  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  40090080 ttagcatgtaagatgttgttt 40090060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 48602436 - 48602556
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||  |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  48602436 tactccctccgtttcaaaatacatgcccaatttttccaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 48602535  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  48602536 ttagcatgtaagatgttgttt 48602556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 36585115 - 36585229
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  36585115 ctccgtttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaatattagca 36585214  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  36585215 tgtaagatgttgttt 36585229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 255 - 360
Target Start/End: Original strand, 44732027 - 44732132
Alignment:
Q  255 aaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 354  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44732027 aaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagatg 44732126  T
Q  355 ttgttt 360  Q
    ||||||    
T  44732127 ttgttt 44732132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 11502832 - 11502722
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11502832 gtttcaaaatacatgtccaatttttgtaatgtgcattattgacttaacttactttgatcatactttttaactaatgtataaatacaaatattagcatgta 11502733  T
Q  350 agatgttgttt 360  Q
    |||||| ||||    
T  11502732 agatgtcgttt 11502722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 240 - 340
Target Start/End: Complemental strand, 46322227 - 46322127
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46322227 tactccctccatttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtatcaatacaaata 46322128  T
Q  340 t 340  Q
    |    
T  46322127 t 46322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 46103625 - 46103512
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  46103625 tactccctccgtttcaaaatacatgtccaatttttacaatgtgc-------acttgacttactttgaccatactttttaactaatatataaatacaaata 46103533  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  46103532 ttagcatgtaagatgttgttt 46103512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 8683827 - 8683935
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    ||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       
T  8683827 cgttttaaaatacatgtccaatttttgaaatgtgcattattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca--- 8683923  T
Q  349 aagatgttgttt 360  Q
    ||||||||||||    
T  8683924 aagatgttgttt 8683935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 30342081 - 30342194
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||| ||||||||||  ||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  30342081 tccgttttaaaatacatgatcaatttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagtat 30342180  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||| ||||    
T  30342181 gtaagatgtcgttt 30342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 39130181 - 39130068
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||| ||||||||| |  ||||||||||||||||  |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  39130181 tccgttttaaaatacatctttaatttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaatattagcat 39130082  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  39130081 gtaagatgttgttt 39130068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 35117126 - 35117245
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| ||||||| ||| ||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  35117126 tactccctccgttttaaaatacctgttcaatttttgcaatatgcactattcacttgacttactttgaccatac-ttttaactaatgtataaatataaata 35117224  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  35117225 ttagcatgtaagatgttgttt 35117245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 42877386 - 42877506
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||  |||| | || |||||||||||||||||||||||||||||||||||||| |||||    
T  42877386 tactccctccgtttcaaaatacatgtccaaattttgtaatgtgcactattaatttaacttactttgaccatactttttaactaatgtataaataaaaata 42877485  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||| ||||||||||||||||    
T  42877486 ttagaatgtaagatgttgttt 42877506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 46479838 - 46479949
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    |||||||||||||||||  ||||||| ||||||||  ||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  46479838 cgtttcaaaatacatgtttaatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgt 46479937  T
Q  349 aagatgttgttt 360  Q
    ||||||||||||    
T  46479938 aagatgttgttt 46479949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 6174843 - 6174952
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||| ||||||||||||||||| ||||  |||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||    
T  6174843 tccgtttcaaaatatatgtccaatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaacattagcat 6174942  T
Q  347 gtaagatgtt 356  Q
    ||||||||||    
T  6174943 gtaagatgtt 6174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 3851084 - 3851194
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||| |||||||| ||||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||     
T  3851084 tccgtctcaaaatatatgtccaatttttgcaatgtgc---attcacttgacttactttgacaatactttttaactaatgtataaatacaaatattaacac 3851180  T
Q  347 gtaagatgttgttt 360  Q
    ||||||| ||||||    
T  3851181 gtaagatattgttt 3851194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 6766812 - 6766692
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||||  | |||| |||| ||| |||||||| | ||||| |||||||||| |||||||||||||||||||| |||||     
T  6766812 tactccctccgtttcaaaatacatgtcgcaattttacaatctgcattattcacataacttattttgaccatattttttaactaatgtataaatgcaaatg 6766713  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  6766712 ttagcatgtaagatgttgttt 6766692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 41088585 - 41088704
Alignment:
Q  238 gttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaa 337  Q
    ||||||| |||| ||||||||||||||||||| |||| |||| |||  | ||||  |||||||||||||||||| |||||||||||||||||||| ||||    
T  41088585 gttactccctccatttcaaaatacatgtccaaattttacaatatgcactgttcatctgacttactttgaccatattttttaactaatgtataaatgcaaa 41088684  T
Q  338 tattagcatgtaagatgttg 357  Q
    ||||| ||||||||||||||    
T  41088685 tattaacatgtaagatgttg 41088704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 41134738 - 41134630
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||| ||||||||||| |||||||| |||||||   |||||| |||||||||||||||||||     ||||||||||||||||||||||||||||||    
T  41134738 tccgttttaaaatacatgttcaatttttacaatgtgtactattcatttgacttactttgaccata-----taactaatgtataaatacaaatattagcat 41134644  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  41134643 gtaagatgttgttt 41134630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 5788629 - 5788519
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||| |||||||||||| ||||||||  ||| ||  |||||| |||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||    
T  5788629 gtttaaaaatacatgtctaatttttgtgatgagcactattcaattgacttactttaatcatacttttttactaatgtataaatacaaatattagtatgta 5788530  T
Q  350 agatgttgttt 360  Q
    |||||||||||    
T  5788529 agatgttgttt 5788519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 249 - 359
Target Start/End: Original strand, 36341629 - 36341739
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    ||||||||||||||||||  |||||||||||||||  ||||||| ||||||| ||| || |||||||||||||||  |||||||| |||| |||| ||||    
T  36341629 cgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttaatttaacgatactttttaactaacatataaatataaatgttagaatgt 36341728  T
Q  349 aagatgttgtt 359  Q
    |||||||||||    
T  36341729 aagatgttgtt 36341739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 7169133 - 7169242
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||||||  | ||||||||||||   ||||||| ||| |||||||||| ||| |||||||||||| ||||||||||||||||| |||    
T  7169133 tccgtttcaaaatacatgtcataattttgcaatgtgtcatattcacatgatttactttgactatattttttaactaatatataaatacaaatattaacat 7169232  T
Q  347 gtaagatgtt 356  Q
     |||||||||    
T  7169233 ataagatgtt 7169242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 2198602 - 2198722
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| |||||| ||||  ||| |||||||||||   ||||||  ||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  2198602 tactccctccgttttaaaatagatgtgtaatatttgcaatgtgtactattcatctgatttattttgaacatactttttaactaatgtataaatacaaata 2198701  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    ||| || ||||||||||||||    
T  2198702 ttaacaagtaagatgttgttt 2198722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 42662194 - 42662284
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    ||||||||||||||||||||  | ||||||||||||  |||||||| |  |||||||||||||||||||||||||||| |||||||||||||    
T  42662194 tccgtttcaaaatacatgtcgcaattttgcaatgtgtattattcacatt-cttactttgaccatactttttaactaatatataaatacaaat 42662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 356
Target Start/End: Original strand, 26161602 - 26161712
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    |||| ||||||||||||||||  |||| |  |||| ||  ||||||| ||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||    
T  26161602 ctccatttcaaaatacatgtcacatttgtataatgcgcactattcacatgatttattttgaccatgctttttaactaatatataaatacaaatattagca 26161701  T
Q  346 tgtaagatgtt 356  Q
    ||||| |||||    
T  26161702 tgtaaaatgtt 26161712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 4131758 - 4131645
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||| |||||  | |||| ||||||    ||||||| | ||||||||| |||||| |||||||||||| ||||||||||||  |||||||    
T  4131758 tccgtttcaaaatatatgtcgcaattttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaatacaaaagttagcat 4131659  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  4131658 gtaagatgttgttt 4131645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 27045663 - 27045550
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||||||||   | |||| ||||||    ||||||| ||  |||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  27045663 tccgtttcaaaatacatgttgcaattttacaatgtatactattcacatggtttactttgaccatattttttaactaatatataaatacaaatgttagcat 27045564  T
Q  347 gtaagatgttgttt 360  Q
     |||||||||||||    
T  27045563 ataagatgttgttt 27045550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 239 - 358
Target Start/End: Complemental strand, 35570317 - 35570193
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccata-----ctttttaactaatgtataaata 333  Q
    |||||| |||||||||||||||||||||  | |||| ||||||||  |||||||   ||||||||||||||||      |||||||||||| || |||||    
T  35570317 ttactcactccgtttcaaaatacatgtcgcaattttacaatgtgcactattcacaaaacttactttgaccatatttttttttttaactaatatacaaata 35570218  T
Q  334 caaatattagcatgtaagatgttgt 358  Q
    ||||| |||||||||||||||||||    
T  35570217 caaattttagcatgtaagatgttgt 35570193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 21379817 - 21379864
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  21379817 tttttagctaatgtataaatacaaatattagcatgtaagatgttgttt 21379864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 34750550 - 34750618
Alignment:
Q  288 ttcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    ||||| ||||||||||||||| ||||||||||||||| || ||||| |||| ||| |||||||||||||    
T  34750550 ttcacatgacttactttgaccctactttttaactaatatacaaataaaaatgttaacatgtaagatgtt 34750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 359
Target Start/End: Complemental strand, 38767265 - 38767202
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||||||||||||||| |||||||||||| ||||||||||||| | || || ||||||||||||    
T  38767265 acttactttgaccatattttttaactaatatataaatacaaatgtcagtatataagatgttgtt 38767202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 45331915 - 45331992
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaac 320  Q
    ||||| ||||||||||||| ||||||   ||||||||||| ||| |||||||  |||||||||||||||||| ||||||||    
T  45331915 tactccctccgtttcaaaacacatgt---atttttgcaatatgcattattcatatgacttactttgaccatattttttaac 45331992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 5529018 - 5529127
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||||||| | |||| |||||| |  |||| || |   ||| |||||| ||| |||||||||||| || ||||| |||| |||||||    
T  5529018 tccgtttcaaaatacatgtcctaattttacaatgtacactatttacgtagattattttgactatattttttaactaatatacaaataaaaatgttagcat 5529117  T
Q  347 gtaagatgtt 356  Q
    ||||||||||    
T  5529118 gtaagatgtt 5529127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 23707612 - 23707572
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaagat 353  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  23707612 tttttaactaatgtataaatacaaatattagcatgtgagat 23707572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 353
Target Start/End: Complemental strand, 37467511 - 37467456
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 353  Q
    ||||||| |||||| |||||||||||| ||||||||||||| ||||||| ||||||    
T  37467511 ttactttaaccatattttttaactaatatataaatacaaatgttagcatttaagat 37467456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 3785578 - 3785640
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||| ||  | ||||||||||    
T  3785578 ttactttgaccatattttttaactaatatataaatacaaatgttagtatacaggatgttgttt 3785640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 31466402 - 31466476
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||||||||||||    
T  31466402 ttattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgtt 31466476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 49110725 - 49110612
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||| ||||||||||||  | ||||  ||||||   ||||||  ||| |||||||||||||| |||||||||||| ||| ||||||||| |||  ||    
T  49110725 tccgttttaaaatacatgtcacaattttataatgtgtactattcaaatgatttactttgaccatattttttaactaatatattaatacaaatgttatgat 49110626  T
Q  347 gtaagatgttgttt 360  Q
    |||| || ||||||    
T  49110625 gtaaaatattgttt 49110612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 49102007 - 49101955
Alignment:
Q  308 catactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||| ||||||||||||  |||||||||||| || ||||||||||||||||||    
T  49102007 catattttttaactaatacataaatacaaatttttgcatgtaagatgttgttt 49101955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 359
Target Start/End: Original strand, 36515895 - 36515958
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||||||| |||||| |||||||  ||| ||||||||||||| |||| || ||||||||||||    
T  36515895 acttactttaaccatattttttaatcaatatataaatacaaatgttagtatataagatgttgtt 36515958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 359
Target Start/End: Complemental strand, 47526042 - 47525979
Alignment:
Q  297 cttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||||||||| |||| ||||| ||||||| ||||||||||||| ||||||| |||||| |||||    
T  47526042 cttactttgatcatatttttttaactaatatataaatacaaatgttagcatttaagatcttgtt 47525979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 44479765 - 44479839
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  44479765 ttattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgtt 44479839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 2952429 - 2952521
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccata-ctttttaactaatgtataaatacaaat 338  Q
    ||||||||||||||| |||   | |||| ||| |||| |||||||| |  |||||||||||||||  |||||||||||| |||||||| ||||    
T  2952429 tccgtttcaaaatacgtgttgcaattttacaacgtgcattattcacgtagcttactttgaccatatttttttaactaatttataaatataaat 2952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 16870686 - 16870626
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    |||||||||||||||| || ||||||||| |||||||| |||| || ||| |||| |||||    
T  16870686 acttactttgaccatatttgttaactaatatataaatataaatgtttgcacgtaaaatgtt 16870626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 19120719 - 19120679
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaagat 353  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  19120719 tttttaattaatatataaatataaatattagcatgtaagat 19120679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 16120703 - 16120582
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16120703 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 16120604  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  16120603 attagcatgtaagatgttgttt 16120582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 30003540 - 30003653
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30003540 tccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 30003639  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  30003640 gtaagatgttgttt 30003653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 6402672 - 6402552
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  6402672 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaata 6402573  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  6402572 ttagcatgtaagatgttgttt 6402552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 11641329 - 11641209
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11641329 tactccctccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 11641230  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  11641229 ttagcatgtaagatgttgttt 11641209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 40772034 - 40771914
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40772034 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaata 40771935  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  40771934 ttagcatgtaagatgttgttt 40771914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 9342900 - 9342787
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  9342900 tccgtttcaaaaaacatgtctaatttttgcaatgtgcgttattcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcat 9342801  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  9342800 gtaagatgttgttt 9342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 36757737 - 36757628
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36757737 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 36757638  T
Q  351 gatgttgttt 360  Q
    ||||||||||    
T  36757637 gatgttgttt 36757628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 356
Target Start/End: Original strand, 6766372 - 6766488
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6766372 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 6766471  T
Q  340 ttagcatgtaagatgtt 356  Q
    |||||||||||||||||    
T  6766472 ttagcatgtaagatgtt 6766488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 30701718 - 30701838
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30701718 tactccctccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaata 30701817  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    ||||| |||||||||||||||    
T  30701818 ttagcgtgtaagatgttgttt 30701838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 40977744 - 40977630
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||| |||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40977744 ctccgttgcaaaatacatgtccaatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattagca 40977645  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  40977644 tgtaagatgttgttt 40977630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 230 - 360
Target Start/End: Complemental strand, 42788814 - 42788684
Alignment:
Q  230 atcactttgttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtata 329  Q
    ||||||||  ||||| |||| |||||||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42788814 atcactttaatactccctccatttcaaaatatatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtata 42788715  T
Q  330 aatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||| ||||||||||||||||||    
T  42788714 aatacaaatatttgcatgtaagatgttgttt 42788684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 36399105 - 36399218
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  36399105 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagcgt 36399204  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  36399205 gtaagatgttgttt 36399218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 17305954 - 17306074
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  17305954 tactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaata 17306053  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  17306054 ttagcatgtaagatgttgttt 17306074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 52024026 - 52024146
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||| |||||||||||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  52024026 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataaata 52024125  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    ||||| |||||||||||||||    
T  52024126 ttagcgtgtaagatgttgttt 52024146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 246 - 356
Target Start/End: Original strand, 27292646 - 27292756
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||||||||||| |||||||||||||||||| |||  ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  27292646 ctccgtttcaaaatatatgtccaatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaatacaaatattagca 27292745  T
Q  346 tgtaagatgtt 356  Q
    |||||||||||    
T  27292746 tgtaagatgtt 27292756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 24321259 - 24321381
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgacc--atactttttaactaatgtataaatacaaa 337  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||  ||||||||||| |||||||||||  ||| |||||||||||||||||||||||||    
T  24321259 tactccctccgttttaaaatacatgtcgaatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaatacaaa 24321358  T
Q  338 tattagcatgtaagatgttgttt 360  Q
    |||||||||||||||| ||||||    
T  24321359 tattagcatgtaagatattgttt 24321381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 26910082 - 26910196
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    |||| ||| |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26910082 ctccattttaaaatacatgtataatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattaaca 26910181  T
Q  346 tgtaagatgttgttt 360  Q
    || |||||| |||||    
T  26910182 tgcaagatgatgttt 26910196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 42735423 - 42735307
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatact---ttttaactaatgtataaatacaaatattag 343  Q
    ||||||||||||||||||| ||||| |||||||||||  ||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||    
T  42735423 tccgtttcaaaatacatgttcaattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaatacaaatattag 42735324  T
Q  344 catgtaagatgttgttt 360  Q
    ||||||||||| |||||    
T  42735323 catgtaagatgatgttt 42735307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 15912585 - 15912478
Alignment:
Q  253 tcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaga 352  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||| | | || | |||||||||||||||||||||||||    
T  15912585 tcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatacttttttatttatttttaaatacaaatattagcatgtaaga 15912486  T
Q  353 tgttgttt 360  Q
    ||||||||    
T  15912485 tgttgttt 15912478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 249 - 359
Target Start/End: Complemental strand, 28030934 - 28030824
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    |||||||||||||||||   ||||||||||||||| ||||| || ||||||| ||||||||||||||||||||||  ||||||||||||| |||||||||    
T  28030934 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttattttgaccatactttttaactaacatataaatacaaatgttagcatgt 28030835  T
Q  349 aagatgttgtt 359  Q
    ||||| |||||    
T  28030834 aagatattgtt 28030824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 356
Target Start/End: Original strand, 4302118 - 4302234
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| | ||||||||| ||||||||||||||| |  |||| ||||||||||||||||  ||  ||||||||||||||||||||| |||||    
T  4302118 tactcgctccgttttataatacatgttcaatttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataaata 4302217  T
Q  340 ttagcatgtaagatgtt 356  Q
    |||||||||||||||||    
T  4302218 ttagcatgtaagatgtt 4302234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 48375018 - 48375114
Alignment:
Q  256 aaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaaga 352  Q
    ||||| |||| ||||||||||||||| | |||||||||| ||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  48375018 aaatatatgttcaatttttgcaatgtacattattcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgtaaga 48375114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 359
Target Start/End: Complemental strand, 44647975 - 44647856
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||| ||| ||||||||||||  |||||| |||||||  |||||||| ||||||| ||||| |||| |||||||| ||| |||||||||||||     
T  44647975 tactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatg 44647876  T
Q  340 ttagcatgtaagatgttgtt 359  Q
    ||||||||||||||||||||    
T  44647875 ttagcatgtaagatgttgtt 44647856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 42367512 - 42367442
Alignment:
Q  286 tattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || |||||||||||||    
T  42367512 tattcacttgacttactttgatcataatttttaactaatgtataaatacaaatactaacatgtaagatgtt 42367442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 243 - 360
Target Start/End: Complemental strand, 15382685 - 15382568
Alignment:
Q  243 tctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 342  Q
    ||||||||||||||||||||||||  | |||| |||||| |  ||||||| | ||||||| ||||||   ||||||| |||| |||||||||||||||||    
T  15382685 tctctccgtttcaaaatacatgtcgcaattttacaatgtacactattcacataacttactctgaccaatttttttaaataatatataaatacaaatatta 15382586  T
Q  343 gcatgtaagatgttgttt 360  Q
    | ||||||||||||||||    
T  15382585 gtatgtaagatgttgttt 15382568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 38153528 - 38153423
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    ||||||||||||||||  ||||||  |||||||  ||||||| ||||||||| | ||||||||||||||||||  ||||||||||||| ||| |||||||    
T  38153528 tttcaaaatacatgtcgcatttttataatgtgcactattcacatgacttactgttaccatactttttaactaacatataaatacaaatgttatcatgtaa 38153429  T
Q  351 gatgtt 356  Q
    ||||||    
T  38153428 gatgtt 38153423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 40800649 - 40800529
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccata-ctttttaactaatgtataaatacaaat 338  Q
    |||||||||| |||||||||| |||||  | |||| |||||||| ||| |||| | ||||||||||||||||  |||||||||||| ||| |||||||||    
T  40800649 tactctctccatttcaaaatatatgtcgtaattttacaatgtgcattaatcacataacttactttgaccatatttttttaactaatatat-aatacaaat 40800551  T
Q  339 attagcatgtaagatgttgttt 360  Q
     |||||||||||||||||||||    
T  40800550 gttagcatgtaagatgttgttt 40800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 240 - 347
Target Start/End: Complemental strand, 44644617 - 44644510
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||| ||| ||||||||||||  |||||| |||||||  |||||||| ||||||||||||| |||| |||||||| ||| |||||||||||||     
T  44644617 tactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttactttgatcatattttttaacaaatatataaatacaaatg 44644518  T
Q  340 ttagcatg 347  Q
    ||||||||    
T  44644517 ttagcatg 44644510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 22575792 - 22575729
Alignment:
Q  297 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||| | |||| |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  22575792 cttactttcatcatattttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 22575729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 3485459 - 3485349
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||| ||||||||||||  | |||| |||| |||  ||||| | | ||||||||||| |||| |||||||||||| ||||||||||||| ||| ||||||    
T  3485459 gttttaaaatacatgtcgtaattttacaatatgcactattcgcataacttactttgatcatattttttaactaatatataaatacaaatgttatcatgta 3485360  T
Q  350 agatgttgttt 360  Q
    || ||||||||    
T  3485359 aggtgttgttt 3485349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 298 - 356
Target Start/End: Complemental strand, 30385349 - 30385291
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||||    
T  30385349 ttactttgaccatattttttaactaatatataaatacaaatgttagtatgtaagatgtt 30385291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 31444986 - 31445043
Alignment:
Q  303 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||| |||||||||||| |||||| |||||| || ||||||||||||||||||    
T  31444986 ttgaccatattttttaactaatatataaacacaaatgtttgcatgtaagatgttgttt 31445043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 9881319 - 9881395
Alignment:
Q  283 cgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||||||||| | ||||| ||| |||||| |||||||||||| |||| ||| |||| ||| ||||||||||||||||    
T  9881319 cgttattcacataacttattttaaccataatttttaactaatatatacatataaatgttatcatgtaagatgttgtt 9881395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 14777090 - 14777152
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||| |||| |||||||||  | |||||||||||||||||  ||||||||||||||||    
T  14777090 ttactttgatcatattttttaactgttatataaatacaaatattaatatgtaagatgttgttt 14777152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 25171240 - 25171274
Alignment:
Q  326 tataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||||||||||||||||    
T  25171240 tataaatacaaatattagcatgtaagatgttgttt 25171274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 359
Target Start/End: Complemental strand, 50972892 - 50972777
Alignment:
Q  248 ccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcac----ttgacttactttgaccatactttttaactaatgtataaatacaaatattag 343  Q
    |||||||||| ||||||||  ||||||||||| |||  || ||||     ||||||||||||| |||||||||||| |||| ||||||||||||| |||     
T  50972892 ccgtttcaaattacatgtcacatttttgcaatttgcactaatcacatgactgacttactttgaacatactttttaaataatatataaatacaaatgttaa 50972793  T
Q  344 catgtaagatgttgtt 359  Q
    ||| ||| || |||||    
T  50972792 catataaaatattgtt 50972777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 27984563 - 27984671
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||| ||||||||||||  | |||| |||  |||  ||||||| |  ||||||||||||||| |||||||||||| ||  ||||||||| ||||| |    
T  27984563 tccgttttaaaatacatgtcacaattttacaacatgcactattcacattgcttactttgaccata-tttttaactaatatacgaatacaaatgttagctt 27984661  T
Q  347 gtaagatgtt 356  Q
    ||||||||||    
T  27984662 gtaagatgtt 27984671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 359
Target Start/End: Complemental strand, 52379215 - 52379132
Alignment:
Q  276 caatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||| ||| ||||| ||||||  ||||||||||||||||||  ||||||  ||||| | ||||| || ||||||||||||||||    
T  52379215 caatatgcattattgacttgatatactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgtt 52379132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 7568678 - 7568628
Alignment:
Q  310 tactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||||| |||||||| |||| ||||  |||||||||||||||    
T  7568678 tactttttaactaatatataaatataaatgttagtgtgtaagatgttgttt 7568628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 348
Target Start/End: Original strand, 25695404 - 25695508
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttt---taactaatgtataaatacaaatattag 343  Q
    |||||||||||||| || ||  ||||||||||||||| ||| |||  | |||| | ||||||||| ||||   |||||||| |||||||| |||| ||||    
T  25695404 tccgtttcaaaataaatttcacatttttgcaatgtgcattaatcatatcacttgcgttgaccatatttttttttaactaatatataaatataaatgttag 25695503  T
Q  344 catgt 348  Q
    |||||    
T  25695504 catgt 25695508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 37281309 - 37281235
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  37281309 ttattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgtt 37281235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 352
Target Start/End: Original strand, 34634914 - 34635019
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||| ||||| |||||  |  |||||||||||   | ||||| | ||||| |||||  ||| |||||||||||| ||||||||||||| ||| |||    
T  34634914 tccgtttctaaataaatgtcgcaactttgcaatgtgaagttttcacataacttattttgataatattttttaactaatatataaatacaaatgttaacat 34635013  T
Q  347 gtaaga 352  Q
    ||||||    
T  34635014 gtaaga 34635019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 16689870 - 16689941
Alignment:
Q  286 tattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||| | ||||||||||| |||| ||| |||||||| ||||||||||   ||| |||||||| |||||||||    
T  16689870 tattcacataacttactttgatcatattttctaactaatatataaataca---attcgcatgtaatatgttgttt 16689941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 359
Target Start/End: Complemental strand, 50539471 - 50539403
Alignment:
Q  291 acttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  50539471 acttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgtt 50539403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 4147931 - 4148051
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4147931 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 4148030  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  4148031 ttagcatgtaagatgttgttt 4148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 22054772 - 22054892
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22054772 tactctctccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 22054871  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  22054872 ttagcatgtaagatgttgttt 22054892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 18668950 - 18668830
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  18668950 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaatacaaata 18668851  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  18668850 ttagcatgtaagatgttgttt 18668830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 19088220 - 19088100
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  19088220 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaata 19088121  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  19088120 ttagcatgtaagatgttgttt 19088100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 24624203 - 24624083
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24624203 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 24624104  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  24624103 ttagcatgtaagatgttgttt 24624083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 32414941 - 32414821
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32414941 tactccctccgtttcaaaatacatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 32414842  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  32414841 ttagcatgtaagatgttgttt 32414821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 17257903 - 17257793
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17257903 gtttcaaaatacatgtctaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtacaaatacaaatattagcatgta 17257804  T
Q  350 agatgttgttt 360  Q
    |||||||||||    
T  17257803 agatgttgttt 17257793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 15383185 - 15383072
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  15383185 tccgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaatattagcat 15383086  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  15383085 gtaagatgttgttt 15383072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 6563226 - 6563346
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6563226 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaata 6563325  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  6563326 ttagcatgtaagatgttgttt 6563346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 32671816 - 32671936
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  32671816 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaata 32671915  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    ||||| |||||||||||||||    
T  32671916 ttagcgtgtaagatgttgttt 32671936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 20226550 - 20226440
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20226550 gtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 20226451  T
Q  350 agatgttgttt 360  Q
    ||| |||||||    
T  20226450 agacgttgttt 20226440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 22120534 - 22120424
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22120534 gtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 22120435  T
Q  350 agatgttgttt 360  Q
    ||| |||||||    
T  22120434 agacgttgttt 22120424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 3989518 - 3989406
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  3989518 tccgttacaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgt-taaatacaactattagcat 3989420  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  3989419 gtaagatgttgttt 3989406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 25476071 - 25475955
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||         
T  25476071 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata----- 25475977  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  25475976 attagcatgtaagatgttgttt 25475955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 17214046 - 17213926
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||| ||||||||||||||    
T  17214046 tactccctccatttcaaaatacatgtctaatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatacaaata 17213947  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  17213946 ttagcatgtaagatgttgttt 17213926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 31569280 - 31569175
Alignment:
Q  248 ccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 347  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||    
T  31569280 ccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatg 31569181  T
Q  348 taagat 353  Q
    ||||||    
T  31569180 taagat 31569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 270 - 360
Target Start/End: Original strand, 1040854 - 1040944
Alignment:
Q  270 tttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1040854 tttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagatgttgttt 1040944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 10520475 - 10520588
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||||| | |||||||||||||||||||| ||||||  ||    
T  10520475 tccgtttcaaaatacatgttcaatttttgcaatgtgtattattcatttgacttactttgaccatacctattaactaatgtataaatacagatattaatat 10520574  T
Q  347 gtaagatgttgttt 360  Q
    |||| |||||||||    
T  10520575 gtaaaatgttgttt 10520588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 20437269 - 20437155
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccata-ctttttaactaatgtataaatacaaatattagca 345  Q
    |||||||  ||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| | ||    
T  20437269 tccgttttcaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaatacaaatatcaaca 20437170  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  20437169 tgtaagatgttgttt 20437155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 268 - 360
Target Start/End: Complemental strand, 24955630 - 24955538
Alignment:
Q  268 aatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||| ||||||| |||||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24955630 aatttttgtaatgtgcattattcacttgacttattttgatcatattttttaactaatgaataaatacaaatattagcatgtaagatgttgttt 24955538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 28477764 - 28477873
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    ||||||||||||||||  | ||||||||||||   ||||||| |||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  28477764 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatattagcatgtaa 28477863  T
Q  351 gatgttgttt 360  Q
    | ||||||||    
T  28477864 gttgttgttt 28477873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 12225975 - 12226095
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||||| || ||||||||||||| || |||||||   ||| ||| |||||||| |||||| ||||| |||||||||||||||||||||||||| |||||    
T  12225975 tactctcaccatttcaaaatacatatctaatttttatgatgcgcgctattcactggacttattttgatcatactttttaactaatgtataaatataaata 12226074  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||| ||||||    
T  12226075 ttagcatgtaagatattgttt 12226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 15337498 - 15337608
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||||||||||||| ||  | |||| |||| ||| |||||||| | |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  15337498 gtttcaaaatacatttcacaattttacaatatgcattattcacataacttactttgaccatattttttaactaatatataaatacaaatattagcatgta 15337597  T
Q  350 agatgttgttt 360  Q
    | |||||||||    
T  15337598 aaatgttgttt 15337608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 29790216 - 29790326
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||||||||||||||||  | |||||||||||    ||||||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  29790216 gtttcaaaatacatgtcgcaattttgcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatacaaatattagcatgta 29790315  T
Q  350 agatgttgttt 360  Q
    || ||||||||    
T  29790316 agttgttgttt 29790326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 241 - 359
Target Start/End: Original strand, 4440851 - 4440969
Alignment:
Q  241 actctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatat 340  Q
    |||||||||||||||||||| ||||   ||||||| |||||||  ||||||  | |||||||||||||||||||||||  |||  ||||||||||||| |    
T  4440851 actctctccgtttcaaaatatatgttgcatttttgtaatgtgcactattcatataacttactttgaccatactttttaggtaacatataaatacaaatgt 4440950  T
Q  341 tagcatgtaagatgttgtt 359  Q
    |||||||||||||||||||    
T  4440951 tagcatgtaagatgttgtt 4440969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 251 - 357
Target Start/End: Original strand, 29693894 - 29694000
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    ||||||||||||||||  | ||||||||||||   ||||||| |||||| ||||||||||| |||||||||||| |||||||||||||| ||||||||||    
T  29693894 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatactagcatgtaa 29693993  T
Q  351 gatgttg 357  Q
    | |||||    
T  29693994 gttgttg 29694000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 21540880 - 21540775
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    |||||||||||||||  ||||||| ||||||||  |||||| |||||||||||||||||||||||| ||||| | |||||||||||||||||  ||||||    
T  21540880 tttcaaaatacatgtttaatttttacaatgtgcactattcatttgacttactttgaccatacttttaaactagtttataaatacaaatattataatgtaa 21540781  T
Q  351 gatgtt 356  Q
     |||||    
T  21540780 aatgtt 21540775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 31869713 - 31869824
Alignment:
Q  245 tctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 344  Q
    ||||||||||||||||||||||    |||| |||||| |  ||||| | | | |||||||||||||  |||||||||||| ||||||||||||| |||||    
T  31869713 tctccgtttcaaaatacatgtcgcgattttacaatgtacactattcccataatttactttgaccattttttttaactaatatataaatacaaatgttagc 31869812  T
Q  345 atgtaagatgtt 356  Q
    ||||||||||||    
T  31869813 atgtaagatgtt 31869824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 249 - 359
Target Start/End: Original strand, 17155158 - 17155268
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    ||||||||||||||||||   |||||  ||||| |  ||||||| |||| |||||||| |||||||  |||||||  ||||||||||||| |||||||||    
T  17155158 cgtttcaaaatacatgtcgtttttttaaaatgttcactattcacatgacctactttgatcatacttcataactaacatataaatacaaatgttagcatgt 17155257  T
Q  349 aagatgttgtt 359  Q
    |||||||||||    
T  17155258 aagatgttgtt 17155268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 23158115 - 23158051
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||||| | |||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  23158115 acttactttgaccacattttttaactaatatataaatacaaatgttaacatgtaagatgttgttt 23158051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 298 - 356
Target Start/End: Complemental strand, 3623913 - 3623856
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||    
T  3623913 ttactttgaccata-tttttaactaatatataaatacaaatgttagcatgtaagatgtt 3623856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 19240808 - 19240741
Alignment:
Q  286 tattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 353  Q
    ||||||| | ||||| |||||||||| |||||||||||| |||||||||||||||| ||| |||||||    
T  19240808 tattcacataacttattttgaccatattttttaactaatatataaatacaaatatttgcaagtaagat 19240741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 2360048 - 2360110
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||| ||| |||||||||||| |||||||| |||| ||||||||||| |||||||||    
T  2360048 ttactttgactataatttttaactaatatataaataaaaatgttagcatgtaaaatgttgttt 2360110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 356
Target Start/End: Original strand, 8101664 - 8101716
Alignment:
Q  304 tgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    |||||||| |||||||||||| ||||||||||||| ||| |||||||||||||    
T  8101664 tgaccatattttttaactaatatataaatacaaatgttaacatgtaagatgtt 8101716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 5495322 - 5495369
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  5495322 tttttaactaatatataaatacaaatgttagcatgtaagattttgttt 5495369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 10298778 - 10298719
Alignment:
Q  297 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    |||| |||||||||| ||||| |||||| ||||||||||||| ||||||||||| |||||    
T  10298778 cttaatttgaccatattttttcactaatatataaatacaaatgttagcatgtaaaatgtt 10298719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 1260490 - 1260548
Alignment:
Q  300 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgt 358  Q
    |||||||||||| |||||||||||| ||||||||||| | |||||| ||||||| ||||    
T  1260490 actttgaccatattttttaactaatatataaatacaattgttagcacgtaagattttgt 1260548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 18992120 - 18992046
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||||||||||||    
T  18992120 ttattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgtt 18992046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 283
Target Start/End: Complemental strand, 16193100 - 16193057
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgc 283  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||    
T  16193100 tactccctccattttaaaatacatgtccaatttttgcaatgtgc 16193057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Complemental strand, 32420782 - 32420748
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaattttt 274  Q
    ||||| |||||||||||||||||||||||||||||    
T  32420782 tactccctccgtttcaaaatacatgtccaattttt 32420748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 350
Target Start/End: Complemental strand, 14214166 - 14214065
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    ||||| ||||||||||||  | ||||  ||||||| |||||||   |||||  ||||||| || |||||||| ||| |||||||| |||| |||||||||    
T  14214166 cgttttaaaatacatgtcgcaattttataatgtgcattattcatccgacttgttttgaccgtattttttaaccaatatataaatataaatgttagcatgt 14214067  T
Q  349 aa 350  Q
    ||    
T  14214066 aa 14214065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 360
Target Start/End: Complemental strand, 16193053 - 16193024
Alignment:
Q  331 atacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||||||||||    
T  16193053 atacaaatattagcatgtaagatgttgttt 16193024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 268
Target Start/End: Original strand, 13757208 - 13757236
Alignment:
Q  240 tactctctccgtttcaaaatacatgtcca 268  Q
    |||||||||||||||||||||||||||||    
T  13757208 tactctctccgtttcaaaatacatgtcca 13757236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 9e-55; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 42587510 - 42587390
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42587510 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 42587411  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  42587410 ttagcatgtaagatgttgttt 42587390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 239 - 360
Target Start/End: Original strand, 40494383 - 40494504
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40494383 ttactctctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 40494482  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  40494483 attagcatgtaagatgttgttt 40494504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 616783 - 616903
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  616783 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 616882  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  616883 ttagcatgtaagatgttgttt 616903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 623176 - 623296
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  623176 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 623275  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  623276 ttagcatgtaagatgttgttt 623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 14237286 - 14237400
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14237286 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagca 14237385  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  14237386 tgtaagatgttgttt 14237400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 32998456 - 32998570
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32998456 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagca 32998555  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  32998556 tgtaagatgttgttt 32998570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 18044432 - 18044545
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18044432 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcat 18044531  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  18044532 gtaagatgttgttt 18044545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 239 - 360
Target Start/End: Original strand, 41263809 - 41263930
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41263809 ttactctctccatttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaat 41263908  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  41263909 attagcatgtaagatgttgttt 41263930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 246 - 357
Target Start/End: Complemental strand, 3100751 - 3100640
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3100751 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatattagca 3100652  T
Q  346 tgtaagatgttg 357  Q
    ||||||||||||    
T  3100651 tgtaagatgttg 3100640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 132015 - 132137
Alignment:
Q  238 gttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaa 337  Q
    ||||||| ||||||||||||||||||||||| ||||||||| ||||  ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  132015 gttactccctccgtttcaaaatacatgtccactttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaa 132114  T
Q  338 tattagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||||    
T  132115 tattagcatgtaagatgttgttt 132137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 2766304 - 2766190
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    |||||||||||||||||| |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2766304 ctccgtttcaaaatacatatccaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagca 2766205  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  2766204 tgtaagatgttgttt 2766190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 35403523 - 35403636
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||    
T  35403523 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaatacagatattaacat 35403622  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  35403623 gtaagatgttgttt 35403636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 13216972 - 13216863
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  13216972 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgaaa 13216873  T
Q  351 gatgttgttt 360  Q
    ||||||||||    
T  13216872 gatgttgttt 13216863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 36642121 - 36642000
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgacca-tactttttaactaatgtataaatacaaat 338  Q
    ||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||||||| || |||||||||||||    
T  36642121 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatacaaat 36642022  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  36642021 attagcatgtaagatgttgttt 36642000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 5878317 - 5878429
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5878317 tactccctccgtttccaaatacatgtcca-tttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 5878415  T
Q  340 ttagcatgtaagat 353  Q
    ||||||||||||||    
T  5878416 ttagcatgtaagat 5878429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 38957177 - 38957290
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||| ||||||||||||||||||||||  |||| |||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  38957177 tccgtttcaaaatatatgtccaatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagcat 38957276  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  38957277 gtaagatgttgttt 38957290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 246 - 358
Target Start/End: Complemental strand, 4270348 - 4270236
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    |||||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  4270348 ctccgttttaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaaca 4270249  T
Q  346 tgtaagatgttgt 358  Q
    ||||| |||||||    
T  4270248 tgtaatatgttgt 4270236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 8394346 - 8394466
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  8394346 tactccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaatgtataagtacaaata 8394445  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||| || |||||||||||||    
T  8394446 ttagtatttaagatgttgttt 8394466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 22489529 - 22489415
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattag-ca 345  Q
    ||||||| ||||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  22489529 tccgttttaaaatgcatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagtaa 22489430  T
Q  346 tgtaagatgttgttt 360  Q
    || ||||||||||||    
T  22489429 tgcaagatgttgttt 22489415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 247 - 342
Target Start/End: Original strand, 24524107 - 24524202
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 342  Q
    ||||||||||||||||||| ||| |||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24524107 tccgtttcaaaatacatgttcaaattttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 11637792 - 11637902
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    ||||||||||  ||||||||||||| ||||||||  ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  11637792 gtttcaaaatgtatgtccaatttttacaatgtgcactattcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgta 11637891  T
Q  350 agatgttgttt 360  Q
    |||||||||||    
T  11637892 agatgttgttt 11637902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 240 - 346
Target Start/End: Original strand, 36167076 - 36167182
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| |||||||||||   ||||||||||||||   |||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  36167076 tactccctccgttttaaaatacatgtatcatttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaata 36167175  T
Q  340 ttagcat 346  Q
    |||||||    
T  36167176 ttagcat 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 359
Target Start/End: Complemental strand, 6414220 - 6414108
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||| |||||| |||||  |||||||||||||||  ||||||| |||||||||||||||||||||||||| |||| ||||||| |||| ||| | ||    
T  6414220 tccgttttaaaataaatgtcacatttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaatgcaaagattggtat 6414121  T
Q  347 gtaagatgttgtt 359  Q
    |||| ||||||||    
T  6414120 gtaaaatgttgtt 6414108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 33700336 - 33700215
Alignment:
Q  240 tactctctccgtttcaaaatacatgtc-caatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    ||||| ||||||||||||||||||||| |||  ||| ||||| ||  ||||||| |  ||||||||||||||| |||||||||||| |||||||||||||    
T  33700336 tactccctccgtttcaaaatacatgtcgcaaaatttacaatgcgcactattcacatagcttactttgaccatattttttaactaatatataaatacaaat 33700237  T
Q  339 attagcatgtaagatgttgttt 360  Q
     |||| | ||||||||||||||    
T  33700236 gttagtaagtaagatgttgttt 33700215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 38497089 - 38497192
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    |||||||| |||||| |||| |||||||| ||||||||  |||||||||||||||||           ||||||||||||||||||||||||||||||||    
T  38497089 ctccgttttaaaatatatgttcaatttttacaatgtgcactattcacttgacttact-----------ttttaactaatgtataaatacaaatattagca 38497177  T
Q  346 tgtaagatgttgttt 360  Q
    || ||||||||||||    
T  38497178 tggaagatgttgttt 38497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 304
Target Start/End: Complemental strand, 13217276 - 13217219
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttacttt 304  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  13217276 tccgtttcaaaatacatgtccaatttttgcaatgtacactattcacttgacttacttt 13217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 360
Target Start/End: Complemental strand, 3370488 - 3370398
Alignment:
Q  270 tttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||||   | ||||| |||||||||||||||||| ||||||| |||| ||||||||||||| |||  ||||||||| ||||||    
T  3370488 tttttgcaatgtggactgttcacatgacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagatattgttt 3370398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 18035106 - 18035220
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    |||| |||||||||| |||||  | |||| |||||| | |||||| |  | | ||| ||||||||| |||||||||||| ||||||| ||||| ||||||    
T  18035106 ctccttttcaaaatatatgtcgcaattttacaatgtacattattcgcacggcgtacattgaccataatttttaactaatatataaatgcaaatgttagca 18035205  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  18035206 tgtaagatgttgttt 18035220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 359
Target Start/End: Original strand, 18090338 - 18090447
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    ||||| ||| |||||||| ||||||| ||||||||  |||| |  ||||||| ||||| |||| |||||||||||| |||||||| |||| ||||||| |    
T  18090338 cgttttaaattacatgtcgaattttttcaatgtgcactatttatatgactta-tttgatcatattttttaactaatatataaatataaatgttagcatat 18090436  T
Q  349 aagatgttgtt 359  Q
    |||||||||||    
T  18090437 aagatgttgtt 18090447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 271 - 356
Target Start/End: Original strand, 5173282 - 5173367
Alignment:
Q  271 ttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    ||||||||||||   ||||||  ||| ||||||||| |||| | |||||||||| ||||||||||||||||| |||||||||||||    
T  5173282 ttttgcaatgtgtactattcatatgatttactttgatcatattatttaactaatatataaatacaaatattaacatgtaagatgtt 5173367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 40716712 - 40716665
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  40716712 tttttaactaatatataaatacaaattttagcatgtaagatgttgttt 40716665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 40204928 - 40204864
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||| |||| ||||| |||||| ||||||||||||| |||||| ||||| ||||||||    
T  40204928 acttactttgaacatattttttgactaatatataaatacaaatgttagcaggtaagttgttgttt 40204864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 1580817 - 1580883
Alignment:
Q  293 ttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||||||||||||    
T  1580817 ttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgtt 1580883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 3293145 - 3293219
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  3293145 ttattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgtt 3293219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 6471062 - 6470988
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| |||||||| |||||||||  ||||||  ||||| | ||||| || ||||||||||||||||    
T  6471062 ttattgacttgacatactttgatcatacttttctactaattcataaagataaataatatcatgtaagatgttgtt 6470988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 30380747 - 30380673
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  30380747 ttattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgtt 30380673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 32855638 - 32855604
Alignment:
Q  326 tataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||| |||||||||||||||||||||    
T  32855638 tataaatacaaatgttagcatgtaagatgttgttt 32855604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 40013868 - 40013794
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  | ||||  | ||||| ||||| || ||||||||||||||||    
T  40013868 ttattgacttgacatactttgaccatacttttatattaattcacaaatataaataatatcatgtaagatgttgtt 40013794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 353
Target Start/End: Complemental strand, 10982692 - 10982639
Alignment:
Q  300 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 353  Q
    |||||||||||| |||||||| ||| |||||| ||||||||||| || ||||||    
T  10982692 actttgaccatattttttaaccaatatataaaaacaaatattagtatataagat 10982639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 24729917 - 24729974
Alignment:
Q  302 tttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| |||| |||| ||||||| ||| | || |||||||||||||||||||||||||    
T  24729917 tttgatcataattttgaactaatatatgagtataaatattagcatgtaagatgttgtt 24729974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 9632223 - 9632275
Alignment:
Q  308 catactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||| ||||| |||||  ||||||||| ||| |||||||||||||||||||||    
T  9632223 catattttttcactaacatataaatactaatgttagcatgtaagatgttgttt 9632275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 268
Target Start/End: Original strand, 41305762 - 41305790
Alignment:
Q  240 tactctctccgtttcaaaatacatgtcca 268  Q
    |||||||||||||||||||||||||||||    
T  41305762 tactctctccgtttcaaaatacatgtcca 41305790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 9e-55; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 44365157 - 44365277
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44365157 tactctctccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 44365256  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  44365257 ttagcatgtaagatgttgttt 44365277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 235 - 360
Target Start/End: Complemental strand, 8042289 - 8042164
Alignment:
Q  235 tttgttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatac 334  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8042289 tttggtactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatac 8042190  T
Q  335 aaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||||||    
T  8042189 aaatattagcatgtaagatgttgttt 8042164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 19141328 - 19141208
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19141328 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 19141229  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  19141228 ttagcatgtaagatgttgttt 19141208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 240 - 356
Target Start/End: Original strand, 39358146 - 39358262
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39358146 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 39358245  T
Q  340 ttagcatgtaagatgtt 356  Q
    |||||||||||||||||    
T  39358246 ttagcatgtaagatgtt 39358262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 5405002 - 5405116
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5405002 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca 5405101  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  5405102 tgtaagatgttgttt 5405116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 238 - 360
Target Start/End: Original strand, 7608047 - 7608169
Alignment:
Q  238 gttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaa 337  Q
    |||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7608047 gttactccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaa 7608146  T
Q  338 tattagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||||    
T  7608147 tattagcatgtaagatgttgttt 7608169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 356
Target Start/End: Complemental strand, 2183219 - 2183103
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2183219 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaaata 2183120  T
Q  340 ttagcatgtaagatgtt 356  Q
    |||||||||||||||||    
T  2183119 ttagcatgtaagatgtt 2183103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 11841841 - 11841735
Alignment:
Q  254 caaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 353  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11841841 caaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 11841742  T
Q  354 gttgttt 360  Q
    |||||||    
T  11841741 gttgttt 11841735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 6223073 - 6223186
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  6223073 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcat 6223172  T
Q  347 gtaagatgttgttt 360  Q
    |||||||| |||||    
T  6223173 gtaagatgatgttt 6223186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 7799847 - 7799967
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| || ||||||||||||||||||  |||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||| |||||||||||||     
T  7799847 tactccctacgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatg 7799946  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  7799947 ttagcatgtaagatgttgttt 7799967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 238 - 356
Target Start/End: Original strand, 36072172 - 36072290
Alignment:
Q  238 gttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaa 337  Q
    |||||||| ||| |||||||||||||||||||||||| |||| |||  |||||| |||||||||||||| |||| ||||||||||||||||||||| |||    
T  36072172 gttactctatccatttcaaaatacatgtccaatttttacaatatgcactattcatttgacttactttgatcatattttttaactaatgtataaatataaa 36072271  T
Q  338 tattagcatgtaagatgtt 356  Q
    |||||||||||||||||||    
T  36072272 tattagcatgtaagatgtt 36072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 246 - 353
Target Start/End: Original strand, 19262686 - 19262793
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||||||||||||||||||||||||| ||||||||  |||| | || |||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  19262686 ctccgtttcaaaatacatgtccaattttttcaatgtgcactatttatttaacttactttgaccatattttttaactaatatataaatacaaatattagca 19262785  T
Q  346 tgtaagat 353  Q
    ||||||||    
T  19262786 tgtaagat 19262793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 242 - 360
Target Start/End: Original strand, 32774593 - 32774711
Alignment:
Q  242 ctctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 341  Q
    |||||||||||||||||||||||| ||| ||||  |||||||  |||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  32774593 ctctctccgtttcaaaatacatgttcaagttttataatgtgcactatttacttgacttactttgaccatactttttaactaatatatacatataaatatt 32774692  T
Q  342 agcatgtaagatgttgttt 360  Q
    |  ||||||||||||||||    
T  32774693 aatatgtaagatgttgttt 32774711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 33607387 - 33607492
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    |||||||||||||||||||||||| ||||||||  |||||| ||||||||||||||  ||||||||||||||||||||||||||||||||    ||||||    
T  33607387 tttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaatat----atgtaa 33607482  T
Q  351 gatgttgttt 360  Q
    ||||||||||    
T  33607483 gatgttgttt 33607492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 36719573 - 36719466
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||| ||||||||||||||||||||   ||  ||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||    
T  36719573 tccgtttcaaa-tacatgtccaatttttgcaacaagcactattcacttgacttactttgaccatactttttaa-----gtataaatacaaatattagcat 36719480  T
Q  347 gtaagatgttgttt 360  Q
     |||||||||||||    
T  36719479 ttaagatgttgttt 36719466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 245 - 360
Target Start/End: Original strand, 11931696 - 11931811
Alignment:
Q  245 tctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 344  Q
    |||| |||||||||||||||||  | |||| |||| ||| |||||||  | |||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  11931696 tctcagtttcaaaatacatgtcgcaattttacaatatgcattattcatataacttactttgaccatattttttaactaatatataaatacaaatgttagc 11931795  T
Q  345 atgtaagatgttgttt 360  Q
    || |||||||||||||    
T  11931796 atttaagatgttgttt 11931811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 13125361 - 13125287
Alignment:
Q  286 tattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  13125361 tattcacttgacttactttcaccatattttttaactaatgtataaatacaaatattagcatctaagatattgttt 13125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 9172358 - 9172288
Alignment:
Q  290 cacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  9172358 cacttcacttactttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatgttgttt 9172288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 353
Target Start/End: Complemental strand, 43444791 - 43444689
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    ||||||||||||||||  | |||| |||||||| |||||||| | | || ||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  43444791 tttcaaaatacatgtcgcaattttacaatgtgcattattcacataattttctttgaccatattttttaactaatatataaatacaaatgttagcatgtaa 43444692  T
Q  351 gat 353  Q
    |||    
T  43444691 gat 43444689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 360
Target Start/End: Original strand, 44644905 - 44644990
Alignment:
Q  275 gcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||  |||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  44644905 gcaatgtgcactattcaattgtcttactttgaccatactttttaactaatatataaatataaatattaacatataagatgttgttt 44644990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 24251967 - 24252079
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||| ||  | |||| |||| ||  |||||||| | ||||| |||||||||| |||||||||||| ||||||||||||| |||||||    
T  24251967 tccgtttcaaaatacatttcacaattttacaatatgtattattcacataacttattttgaccatattttttaactaatatataaatacaaatgttagcat 24252066  T
Q  347 gtaagatgttgttt 360  Q
    |||| |||||||||    
T  24252067 gtaa-atgttgttt 24252079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 9007035 - 9006939
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 347  Q
    ||||||||||||||||  | |||| |||||||| |||||||  |  ||||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  9007035 tttcaaaatacatgtcgcaattttacaatgtgcattattcatgtagcttactttgaccatattttttaactaatttataaatacaaatgttagcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 255 - 359
Target Start/End: Original strand, 16865069 - 16865173
Alignment:
Q  255 aaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 354  Q
    ||||||||||||  |||||| |||| | |  ||||||  |||||||||||||| |||||||||||||||  ||||||||||||| |||||||||||| ||    
T  16865069 aaaatacatgtcgcatttttacaatatacaatattcatatgacttactttgacgatactttttaactaacatataaatacaaatgttagcatgtaagttg 16865168  T
Q  355 ttgtt 359  Q
    |||||    
T  16865169 ttgtt 16865173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 22839157 - 22839069
Alignment:
Q  272 tttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||  ||||||| | |||||||||||||||| |||||||||| | |||||||  |||| ||||||| |||||||||||||    
T  22839157 tttgcaatgtgcactattcacataacttactttgaccatattttttaactagtatataaattaaaatgttagcatataagatgttgttt 22839069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 38292008 - 38292072
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||||||| |||||||||| | ||||||||||||| ||| |||||||||||||||||    
T  38292008 acttactttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatgttgttt 38292072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 359
Target Start/End: Complemental strand, 24093788 - 24093679
Alignment:
Q  251 tttcaaaatacatgtccaattttt-gcaatgtgcgttattcacttgacttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgt 348  Q
    ||||||||||||||||  |||||| || ||||||| |||||   ||| |||||||||||||||||||| ||||||  ||||| ||||||| |||||||||    
T  24093788 tttcaaaatacatgtcgtattttttgcgatgtgcgctattcgtatgatttactttgaccatacttttttaactaacatataa-tacaaatgttagcatgt 24093690  T
Q  349 aagatgttgtt 359  Q
    |||||||||||    
T  24093689 aagatgttgtt 24093679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 359
Target Start/End: Complemental strand, 13117530 - 13117467
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||||||||||||||| ||||||||| || |||||||| ||||||||| || ||||||||||||    
T  13117530 acttactttgaccatattttttaactgatatataaatataaatattagtatctaagatgttgtt 13117467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 38839136 - 38839191
Alignment:
Q  303 ttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgt 358  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||    
T  38839136 ttgaccatattttttaactaatatataaatacaaatgttagcatataagatgttgt 38839191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 356
Target Start/End: Complemental strand, 36177809 - 36177723
Alignment:
Q  271 ttttgcaatgtgcgttattcacttgacttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    |||||||||| || |||||||| ||| ||| |||||||||| ||||| ||||||| |||||||| |||||||| ||| |||||||||    
T  36177809 ttttgcaatgcgcattattcacatgatttattttgaccatatttttttaactaatatataaataaaaatattaacatctaagatgtt 36177723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 42133810 - 42133868
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    ||||||||| |||| |||||||||||| ||||||||||||| |||||||| ||||||||    
T  42133810 ttactttgatcatattttttaactaatatataaatacaaatgttagcatgaaagatgtt 42133868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 19166037 - 19165925
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||| |||||| |||||   |||||||||||||| | |||||| ||||||  ||||| |||  ||||||| |||| ||||||||||| | ||| |||    
T  19166037 tccgttttaaaatatatgtcgcgtttttgcaatgtgcat-attcacatgacttgttttgatcatggtttttaattaatatataaatacaattgttatcat 19165939  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  19165938 gtaagatgttgttt 19165925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 31610869 - 31610795
Alignment:
Q  286 tattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||| | ||||| ||| |||||  |||||||||||| ||||||||||||| |||| |||||||| |||||||    
T  31610869 tattcacataacttatttttaccattttttttaactaatatataaatacaaatgttagaatgtaagacgttgttt 31610795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 31904085 - 31904027
Alignment:
Q  297 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 355  Q
    |||||| |||||||| |||||||||||| |||||||| |||||||| || |||||||||    
T  31904085 cttactctgaccatattttttaactaatatataaatataaatattatcacgtaagatgt 31904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 13598448 - 13598523
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaacta 322  Q
    |||||||| |||||| ||||   |||||| ||||||||  ||||||  |||||||||||||||||||||||||||||    
T  13598448 ctccgttttaaaatatatgttgcattttt-caatgtgcactattcatatgacttactttgaccatactttttaacta 13598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 359
Target Start/End: Complemental strand, 9553926 - 9553864
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||||||||||||  | |||||||||||| ||||||| ||||||||| ||||||| ||||||||    
T  9553926 acttactttgaccgcattttttaactaatatataaat-caaatattaacatgtaaaatgttgtt 9553864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 359
Target Start/End: Complemental strand, 14372303 - 14372220
Alignment:
Q  276 caatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||| ||| ||||| ||||||  ||||||||||||||||||  ||||||  | ||||| ||||| || ||||||||||||||||    
T  14372303 caatatgcattattgacttgatatactttgaccatacttttctactaattcacaaatataaataataacatgtaagatgttgtt 14372220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 7442935 - 7443009
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  |||||| || ||| | ||| | || ||||||||||||||||    
T  7442935 ttattgacttgacatactttgaccatacttttctactaatttacaaagataaaaaatatcatgtaagatgttgtt 7443009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 4835728 - 4835772
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaagatgttg 357  Q
    |||||||||||| ||||||||||||| ||| ||| ||||||||||    
T  4835728 tttttaactaatatataaatacaaatgttaacatataagatgttg 4835772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 11841590 - 11841622
Alignment:
Q  237 tgttactctctccgtttcaaaatacatgtccaa 269  Q
    |||||||| ||||||||||||||||||||||||    
T  11841590 tgttactccctccgtttcaaaatacatgtccaa 11841622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 4e-54; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 237 - 360
Target Start/End: Complemental strand, 25296845 - 25296722
Alignment:
Q  237 tgttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaa 336  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25296845 tgttactctctccgtttcaaaatacatatctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaa 25296746  T
Q  337 atattagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||||    
T  25296745 atattagcatgtaagatgttgttt 25296722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 26169986 - 26170106
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26169986 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaata 26170085  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  26170086 ttagcatgtaagatgttgttt 26170106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 38416912 - 38416792
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38416912 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 38416813  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  38416812 ttagcatgtaagatgttgttt 38416792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 54330952 - 54330832
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  54330952 tactccctccgtttcgaaatacatgtccaatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaata 54330853  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  54330852 ttagcatgtaagatgttgttt 54330832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 240 - 365
Target Start/End: Complemental strand, 35381156 - 35381031
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  35381156 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 35381057  T
Q  340 ttagcatgtaagatgttgtttcatct 365  Q
    ||||||||||||||||||||| ||||    
T  35381056 ttagcatgtaagatgttgtttgatct 35381031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 44232332 - 44232219
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44232332 tccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 44232233  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  44232232 gtaagatgttgttt 44232219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 55209837 - 55209716
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  55209837 ttactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaat 55209738  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  55209737 attagcatgtaagatgttgttt 55209716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 29830343 - 29830463
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29830343 tactccctccgtttcaaaatacatgtccaatttttttaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 29830442  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  29830443 ttagcatgtaagatgttgttt 29830463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 35686373 - 35686493
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35686373 tactccctcagtttcaaaatacatgtccaatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaata 35686472  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    ||| |||||||||||||||||    
T  35686473 ttatcatgtaagatgttgttt 35686493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 47386548 - 47386428
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47386548 tactccctccgtttcaaaatacatgtccactttttggaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 47386449  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  47386448 ttagcatgtaagatgttgttt 47386428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 12240430 - 12240320
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    ||||||||||||||||||||||||| ||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12240430 gtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 12240331  T
Q  350 agatgttgttt 360  Q
    |||||||||||    
T  12240330 agatgttgttt 12240320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 239 - 356
Target Start/End: Complemental strand, 2760990 - 2760873
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  2760990 ttactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaat 2760891  T
Q  339 attagcatgtaagatgtt 356  Q
    ||||||||||||||||||    
T  2760890 attagcatgtaagatgtt 2760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 43967730 - 43967843
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43967730 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 43967829  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  43967830 gtaagatgttgttt 43967843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 17610280 - 17610400
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  17610280 tactccctccgttttaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaata 17610379  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  17610380 ttagcatgtaagatgttgttt 17610400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 240 - 359
Target Start/End: Original strand, 38716887 - 38717005
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||  |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  38716887 tactccctctgtttcaaaatacatgtccaatttttgcaatgtgcactattaa-ttgacttactttgaccatactttttaactaatgtataaatacaaata 38716985  T
Q  340 ttagcatgtaagatgttgtt 359  Q
    ||||||||||||||||||||    
T  38716986 ttagcatgtaagatgttgtt 38717005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 243 - 360
Target Start/End: Original strand, 12625254 - 12625371
Alignment:
Q  243 tctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 342  Q
    ||||| ||||||||||||||||| ||||||||||||| |||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12625254 tctcttcgtttcaaaatacatgttcaatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatatta 12625353  T
Q  343 gcatgtaagatgttgttt 360  Q
    ||||||||||||||||||    
T  12625354 gcatgtaagatgttgttt 12625371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 239 - 360
Target Start/End: Original strand, 26125707 - 26125828
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| ||||||||||||||| |  | |||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26125707 ttactccctccgtttcaaaatataaattcaatttttacaatatgcattattcacttgacttactttgaccatattttttaactaatgtataaatacaaat 26125806  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  26125807 attagcatgtaagatgttgttt 26125828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 31010214 - 31010334
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||| |||||||||||||| ||||||||||| |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  31010214 tactccctcggtttcaaaatacatatccaatttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataaaaata 31010313  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||| ||||||    
T  31010314 ttagcatgtaagatattgttt 31010334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 25918210 - 25918323
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||| |||||||||||||||||||||||||||||  ||||||||||| ||| ||||||| ||||||||||| |||||||||||| ||||||||||||    
T  25918210 tccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatattagcat 25918309  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  25918310 gtaagatgttgttt 25918323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 246 - 347
Target Start/End: Original strand, 55800840 - 55800941
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||||||| |||||| | |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55800840 ctccgtttcaatatacatcttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 55800939  T
Q  346 tg 347  Q
    ||    
T  55800940 tg 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 19433624 - 19433500
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccata----ctttttaactaatgtataaataca 335  Q
    ||||| ||| |||||||||||||||| |||||||||||||||||  | ||||||||||||||||||||||||    ||||||||||| ||||||||||||    
T  19433624 tactccctctgtttcaaaatacatgttcaatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaataca 19433525  T
Q  336 aatattagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||||||    
T  19433524 aatattagcatgtaagatgttgttt 19433500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 50205752 - 50205863
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    |||||||||||||||||| | |||||| |||||||  |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||    
T  50205752 cgtttcaaaatacatgtcaagtttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagctcgt 50205851  T
Q  349 aagatgttgttt 360  Q
    ||||||||||||    
T  50205852 aagatgttgttt 50205863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 17446889 - 17446775
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    |||| ||| |||||| ||||||||||||| ||||||||  |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||    
T  17446889 ctccattttaaaatatatgtccaatttttacaatgtgcactattcatttgactaactttgaccatacattttaactaatgtataaatacaaatattaaca 17446790  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  17446789 tgtaagatgttgttt 17446775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 55191830 - 55191944
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||||||||||| |||| |||||||||||||||||  |||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  55191830 ctccgtttcaaaatatatgttcaatttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaaatattagca 55191929  T
Q  346 tgtaagatgttgttt 360  Q
    || || |||||||||    
T  55191930 tgcaaaatgttgttt 55191944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 247 - 356
Target Start/End: Complemental strand, 50620937 - 50620828
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||| |||||| |||||||||||| ||||| |||  ||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  50620937 tccgttttaaaatatatgtccaattttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaatattagcat 50620838  T
Q  347 gtaagatgtt 356  Q
    ||||||||||    
T  50620837 gtaagatgtt 50620828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 270 - 360
Target Start/End: Original strand, 45291862 - 45291952
Alignment:
Q  270 tttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45291862 tttttccaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 45291952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 264 - 360
Target Start/End: Complemental strand, 4467756 - 4467661
Alignment:
Q  264 gtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||  ||||||| ||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4467756 gtccaatttttt-aatgtgcattatttacttgacttgctttgactatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 4467661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 9029707 - 9029591
Alignment:
Q  247 tccgtttcaaaatacatgtccaatt---tttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattag 343  Q
    ||||||| |||||||||||||||||   |||||||| ||   |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9029707 tccgttttaaaatacatgtccaattaattttgcaatctgtactatttacttaacttactttgaccatactttttaactaatgtataaatacaaatattag 9029608  T
Q  344 catgtaagatgttgttt 360  Q
    || ||||||| ||||||    
T  9029607 cacgtaagatattgttt 9029591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 54610862 - 54610980
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcg-ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    ||||||||||||||||||||| ||||  |||||||||||||| |  |||||||||||||||||||| | |||| ||||||| ||||||||||||||| ||    
T  54610862 tactctctccgtttcaaaatatatgtttaatttttgcaatgtacacttattcacttgacttactttaatcatattttttaattaatgtataaatacagat 54610961  T
Q  339 attagcatgtaagatgttg 357  Q
    ||||| |||||||||||||    
T  54610962 attagtatgtaagatgttg 54610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 359
Target Start/End: Complemental strand, 36523223 - 36523111
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||| |||||  ||||||||||| |||  |||| || |||||||||||||| |||||||||||||||| ||||||||||||| ||| |||    
T  36523223 tccgtttcaaaatatatgtcgcatttttgcaatatgcactatttacatgacttactttgactatactttttaactaatatataaatacaaatgttaacat 36523124  T
Q  347 gtaagatgttgtt 359  Q
    |||||||||||||    
T  36523123 gtaagatgttgtt 36523111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 237 - 360
Target Start/End: Complemental strand, 27407884 - 27407759
Alignment:
Q  237 tgttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaa 336  Q
    |||||||| |||| |||||||||||||| |  ||||||||| ||||   ||||||| | ||||||||||||| ||||||||||||||| |||||||||||    
T  27407884 tgttactccctccatttcaaaatacatgacgcatttttgcagtgtgaactattcacataacttactttgaccctactttttaactaatatataaatacaa 27407785  T
Q  337 atattagca--tgtaagatgttgttt 360  Q
    |||||||||  |||||||||||||||    
T  27407784 atattagcatgtgtaagatgttgttt 27407759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 360
Target Start/End: Original strand, 19595732 - 19595825
Alignment:
Q  267 caatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||| |||| |||  ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| || ||||||    
T  19595732 caatttttacaatatgcactattcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgtaatattttgttt 19595825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 250 - 350
Target Start/End: Original strand, 3036990 - 3037090
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||||||||||||||||  | || | |||||||   ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3036990 gtttcaaaatacatgtcgtaattatacaatgtgtactattcacatgacttactttgaccatactttttaactaatatataaatacaaatattagcatgta 3037089  T
Q  350 a 350  Q
    |    
T  3037090 a 3037090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 359
Target Start/End: Original strand, 38721337 - 38721456
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||| ||| ||||||||||||  |||||| |||||||  |||||||| ||||||| ||||| |||| |||||||| ||| |||||||||||||     
T  38721337 tactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatg 38721436  T
Q  340 ttagcatgtaagatgttgtt 359  Q
    ||||||||||||||||||||    
T  38721437 ttagcatgtaagatgttgtt 38721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 7614622 - 7614735
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||||||  | |||| |||| |   ||| |||| ||||||| |||||||||| |||||||||||| ||||||||||||| |||||||    
T  7614622 tccgtttcaaaatacatgtcgtaattttacaatatatattaatcacatgacttattttgaccatattttttaactaatatataaatacaaatgttagcat 7614721  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  7614722 gtaagatgttgttt 7614735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 39307703 - 39307816
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||||||  ||||||||||| | |  ||||||| |||||||||||||   ||||||||||||||| ||||||||||||| |||| ||    
T  39307703 tccgtttcaaaatacatgtcgcatttttgcaatataccctattcacatgacttactttgatgctactttttaactaatatataaatacaaatgttagtat 39307802  T
Q  347 gtaagatgttgttt 360  Q
    |||| |||||||||    
T  39307803 gtaaaatgttgttt 39307816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 359
Target Start/End: Original strand, 5428578 - 5428695
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    |||||| ||||||||||||||||||||  ||||| |||||||||  ||||||| |||||||| |||||||||||||||||||||   ||||||| ||||     
T  5428578 tactctatccgtttcaaaatacatgtcgcattttggcaatgtgcactattcacatgacttacgttgaccatactttttaactaa--cataaatataaatg 5428675  T
Q  340 ttagcatgtaagatgttgtt 359  Q
     || ||||||||||||||||    
T  5428676 ctatcatgtaagatgttgtt 5428695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 251 - 353
Target Start/End: Complemental strand, 2571133 - 2571031
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    ||||||||||||||||  ||||||  ||||||| |||||||| ||| ||| |||||| ||| |||||||||||| ||||||||||||| |||||||||||    
T  2571133 tttcaaaatacatgtcacatttttataatgtgcattattcacatgatttattttgactatattttttaactaatatataaatacaaatgttagcatgtaa 2571034  T
Q  351 gat 353  Q
    |||    
T  2571033 gat 2571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 14144663 - 14144599
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  14144663 acttactttgaccacattttttaactaatatataaatacaaatattagtatgtaagatgttgttt 14144599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 30446307 - 30446417
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    ||||||||||| ||||||  || |||| ||| ||| |||||||| ||||||||||||||| || ||||| |||||| ||||||||||||| ||||| |||    
T  30446307 cgtttcaaaatgcatgtcgcatgtttgtaatctgcattattcacatgacttactttgacccta-tttttgactaatatataaatacaaatgttagcctgt 30446405  T
Q  349 aagatgttgttt 360  Q
    || |||||||||    
T  30446406 aaaatgttgttt 30446417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 34323076 - 34323191
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgacca--tactttttaactaatgtataaatacaaatattagc 344  Q
    |||||||||||||||||| |  ||||||  ||||||| |||||||| ||||||||||| | ||  |  ||||||||||||||||| | ||||||||||      
T  34323076 tccgtttcaaaatacatgacgcatttttataatgtgcattattcacatgacttactttaatcatgttttttttaactaatgtatacacacaaatattaat 34323175  T
Q  345 atgtaagatgttgttt 360  Q
    ||||||||||||||||    
T  34323176 atgtaagatgttgttt 34323191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 341
Target Start/End: Complemental strand, 34652304 - 34652208
Alignment:
Q  245 tctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 341  Q
    ||||||||||||||||||||||  ||||||| ||||||   |||| ||  ||||||||| ||||||| |||||||||||  ||||||||||||||||    
T  34652304 tctccgtttcaaaatacatgtcacatttttgtaatgtgtactatttacacgacttacttcgaccatattttttaactaacatataaatacaaatatt 34652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 25101731 - 25101826
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    |||||||||||||||   ||||||||||||||  ||||| |  ||| ||| ||||||||||||||||||||||  ||||||| |||||||||||||    
T  25101731 tttcaaaatacatgttgcatttttgcaatgtgtattatttatatgatttattttgaccatactttttaactaacatataaattcaaatattagcat 25101826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 27755730 - 27755842
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaacta----atgtataaatacaaatattagcat 346  Q
    ||||||||||||||||  ||||||| ||||| | || ||||  | ||||| |||||||||||||||||||||    || ||||||||||||| ||||||     
T  27755730 tttcaaaatacatgtcgcatttttgtaatgtacattgttcatataacttattttgaccatactttttaactaacatatatataaatacaaatgttagcac 27755829  T
Q  347 gtaagatgttgtt 359  Q
    |||||||||||||    
T  27755830 gtaagatgttgtt 27755842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 359
Target Start/End: Original strand, 50181116 - 50181179
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  50181116 acttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgtt 50181179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 358
Target Start/End: Complemental strand, 56297948 - 56297846
Alignment:
Q  256 aaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgt 355  Q
    |||||||||||  |||||| |||||| | |||||||| | ||||  |||||||||| || ||||||||| ||||||||||||| ||||||| ||| ||||    
T  56297948 aaatacatgtcgtatttttacaatgtacattattcacataacttgttttgaccatatttattaactaatatataaatacaaatgttagcatataaaatgt 56297849  T
Q  356 tgt 358  Q
    |||    
T  56297848 tgt 56297846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 247 - 351
Target Start/End: Original strand, 29051691 - 29051793
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||| |||||||||||   | |||| |||| | | |||||||| | |||||||||||||||| |||||||||||| |||||||||||  ||||||||    
T  29051691 tccgttttaaaatacatgttgcaattttacaatatacattattcacataacttactttgaccatattttttaactaatatataaatacaa--attagcat 29051788  T
Q  347 gtaag 351  Q
    |||||    
T  29051789 gtaag 29051793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 37767220 - 37767100
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| |||||  |||||  | ||||| ||| |||  |||| || |||||||||||||| ||||||||||||  || |||||||||||||     
T  37767220 tactccctccgttttaaaatgaatgtcgcaattttgaaatatgcactatttacgtgacttactttgactatactttttaacgtatatataaatacaaatg 37767121  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||| ||||||||| ||||||    
T  37767120 ttagaatgtaagatattgttt 37767100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 19903854 - 19903792
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||||  ||||||||||| ||||||||||||| ||||||||| |||| ||||||    
T  19903854 ttactttgaccatatattttaactaatatataaatacaaatgttagcatgtgagatattgttt 19903792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 356
Target Start/End: Original strand, 23360189 - 23360291
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    ||||||||||||||||  ||||||||||| |||  ||||||  ||||||||||||||| || |||||||||||| ||| ||||||||| || ||| |||     
T  23360189 tttcaaaatacatgtcgcatttttgcaatatgcactattca--tgacttactttgacc-tattttttaactaatatatgaatacaaatgttggcaagtat 23360285  T
Q  351 gatgtt 356  Q
    ||||||    
T  23360286 gatgtt 23360291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 361
Target Start/End: Complemental strand, 34652192 - 34652157
Alignment:
Q  326 tataaatacaaatattagcatgtaagatgttgtttc 361  Q
    ||||||||||||||||||||||||||||||||||||    
T  34652192 tataaatacaaatattagcatgtaagatgttgtttc 34652157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 7738863 - 7738937
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||||||||||||    
T  7738863 ttattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgtt 7738937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 20875451 - 20875389
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||||| |||||||||||| |||||||  |||| || |||| |||||||||||||    
T  20875451 ttactttgaccatattttttaactaatatataaatgtaaatgtttgcatataagatgttgttt 20875389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 32871575 - 32871501
Alignment:
Q  286 tattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||||  ||||| |||| |||||||||||| | ||||||||||| | || ||||| ||||||||||    
T  32871575 tattcacttgacttgttttgatcatattttttaactaatatgtaaatacaaatgtaagtatgtaggatgttgttt 32871501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 34316575 - 34316636
Alignment:
Q  294 tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    ||||||||||||| |||| || ||||||||| ||||||||||||| ||||||| |||||||||    
T  34316575 tgacttactttgatcata-ttgttaactaatatataaatacaaatgttagcatataagatgtt 34316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 46212394 - 46212468
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  ||||| | ||||| || ||||||||||||||||    
T  46212394 ttattgacttgacatactttgaccatacttttatactaattcataaagataaataatatcatgtaagatgttgtt 46212468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 55091391 - 55091329
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||| | |||| ||||||| |||| ||||||||||||| |||| ||||||||||||||||    
T  55091391 ttactttcatcatattttttaattaatatataaatacaaatgttagtatgtaagatgttgttt 55091329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 359
Target Start/End: Complemental strand, 5735497 - 5735414
Alignment:
Q  276 caatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||| ||| ||||| ||||||  ||||||||||||||||||  ||||||  ||||| | ||||| || ||||||||||||||||    
T  5735497 caatatgcattattgacttgatatactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgtt 5735414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 356
Target Start/End: Original strand, 10550499 - 10550542
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    |||||||||||| |||||||| |||| |||||||||||||||||    
T  10550499 tttttaactaatatataaataaaaatgttagcatgtaagatgtt 10550542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 27344137 - 27344090
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  27344137 tttttaactaatatataaataaaaatattaacatataagatgttgttt 27344090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 359
Target Start/End: Complemental strand, 47579512 - 47579429
Alignment:
Q  276 caatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||| ||| ||||| ||||||  ||||||||||||||||||| ||||||  | ||| | ||||| || ||||||||||||||||    
T  47579512 caatatgcattattgacttgatatactttgaccatacttttttactaattcacaaagataaataatatcatgtaagatgttgtt 47579429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 359
Target Start/End: Complemental strand, 49768671 - 49768588
Alignment:
Q  276 caatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||| ||| ||||| ||||||  ||||||||||||||||||| ||||||  | ||| | ||||| || ||||||||||||||||    
T  49768671 caatatgcattattgacttgatatactttgaccatacttttttactaattcacaaagataaataatatcatgtaagatgttgtt 49768588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 3443431 - 3443505
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  |||||| || ||| | || || || ||||||||||||||||    
T  3443431 ttattgacttgacatactttgaccatacttttctactaatttacaaagataagtaatatcatgtaagatgttgtt 3443505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 4264351 - 4264277
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  4264351 ttattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgtt 4264277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 5123201 - 5123275
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||| ||||||  | ||| | ||||| ||  |||||||||||||||    
T  5123201 ttattgacttgacatactttgaccatacttttttactaattcacaaagataaataataagatgtaagatgttgtt 5123275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 53304481 - 53304535
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    ||||||||||| |||| |||| ||||||| || ||||| ||||||||||||||||    
T  53304481 acttactttgatcatatttttaaactaatatacaaatataaatattagcatgtaa 53304535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 20249290 - 20249261
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtcca 268  Q
    ||||||||||||||||||||||||||||||    
T  20249290 ttactctctccgtttcaaaatacatgtcca 20249261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 350
Target Start/End: Complemental strand, 51456543 - 51456506
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  51456543 tttttaactaatatataaatacaaattttagcatgtaa 51456506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 50685403 - 50685339
Alignment:
Q  297 cttactttgaccatactttttaactaatgtataaat-acaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||||| |||||||||||| ||||| | | |||| ||| ||||||| |||||||||    
T  50685403 cttactttgaccatattttttaactaatatataattaaaaaatgttatcatgtaaaatgttgttt 50685339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 6e-53; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 13499598 - 13499477
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13499598 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 13499499  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  13499498 attagcatgtaagatgttgttt 13499477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 239 - 360
Target Start/End: Original strand, 21797555 - 21797676
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  21797555 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaat 21797654  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  21797655 attagcatgtaagatgttgttt 21797676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 42490458 - 42490338
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42490458 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 42490359  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  42490358 ttagcatgtaagatgttgttt 42490338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 42761746 - 42761625
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42761746 ttactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 42761647  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  42761646 attagcatgtaagatgttgttt 42761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 27010736 - 27010616
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  27010736 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaata 27010637  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  27010636 ttagcatgtaagatgttgttt 27010616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 33415799 - 33415919
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33415799 tactccctctgtttcaaaatacatgtccaatttttgcaatgtgcgttatttatttgacttactttgaccatactttttaactaatatataaatacaaata 33415898  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  33415899 ttagcatgtaagatgttgttt 33415919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 39866403 - 39866283
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39866403 tactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 39866304  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  39866303 ttagcatgtaagatgttgttt 39866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 27334986 - 27334873
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27334986 tccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 27334887  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  27334886 gtaagatgttgttt 27334873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 246 - 358
Target Start/End: Complemental strand, 34912398 - 34912286
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  34912398 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagat 34912299  T
Q  346 tgtaagatgttgt 358  Q
    |||||||||||||    
T  34912298 tgtaagatgttgt 34912286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 20765196 - 20765316
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  20765196 tactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaata 20765295  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    ||| |||||||||||||||||    
T  20765296 ttaacatgtaagatgttgttt 20765316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 43468004 - 43467884
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||||||||| | ||||    
T  43468004 tactctctccgtttcaaaatacatgaccaatttttgcaatgtgtactattcacttgacttactttgaccatactttttaactgatgtataaattctaata 43467905  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||| ||||||||||||||    
T  43467904 ttagcaggtaagatgttgttt 43467884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 239 - 360
Target Start/End: Original strand, 19823899 - 19824014
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||      ||||    
T  19823899 ttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtat------aaat 19823992  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  19823993 attagcatgtaagatgttgttt 19824014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 21005293 - 21005413
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||  ||||||||| |||||||||||||||||||||||| |||| |||||||| |||||    
T  21005293 tactccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatataaata 21005392  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  21005393 ttagcatgtaagatgttgttt 21005413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 251 - 360
Target Start/End: Original strand, 33803532 - 33803642
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatac-tttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  33803532 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattagcttgta 33803631  T
Q  350 agatgttgttt 360  Q
    |||||||||||    
T  33803632 agatgttgttt 33803642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 54507647 - 54507761
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    |||||||||||||||||| ||||||||||||||| |||  ||||||||||||||| |||||  ||||||||||||||||||||||||||| |||||||||    
T  54507647 ctccgtttcaaaatacatatccaatttttgcaatatgcactattcacttgacttattttgattatactttttaactaatgtataaatacagatattagca 54507746  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  54507747 tgtaagatgttgttt 54507761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 248 - 360
Target Start/End: Original strand, 6910342 - 6910454
Alignment:
Q  248 ccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 347  Q
    |||||||||||||||||||||| |||| |||||| |  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  6910342 ccgtttcaaaatacatgtccaacttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaaatattaacatg 6910441  T
Q  348 taagatgttgttt 360  Q
    |||||||||||||    
T  6910442 taagatgttgttt 6910454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 36227545 - 36227665
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| ||||| ||||| |||||||||||||| ||  |||||| ||||||||||||||||||| |||| || |||||||||||||||||||    
T  36227545 tactccctccgttttaaaatgcatgttcaatttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaata 36227644  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  36227645 ttagcatgtaagatgttgttt 36227665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 30213850 - 30213924
Alignment:
Q  286 tattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30213850 tattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagatgttgttt 30213924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 43181611 - 43181497
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatacttttt-aactaatgtataaatacaaatattagca 345  Q
    ||||||| |||||||||||  |||||| | |||||||  ||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||| |    
T  43181611 tccgtttaaaaatacatgtttaattttcgtaatgtgcactattcacttgatttactttgaccatacttttttaactaatgtataaatataaatattagta 43181512  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  43181511 tgtaagatgttgttt 43181497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 245 - 360
Target Start/End: Original strand, 38137829 - 38137944
Alignment:
Q  245 tctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 344  Q
    |||||||||  ||||| |||| |  |||||||||| |||  ||||| ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  38137829 tctccgttttcaaatatatgttcggtttttgcaatctgcactattcgcttgatttattttgaccatattttttaactaatgtataaatacaaatattagc 38137928  T
Q  345 atgtaagatgttgttt 360  Q
    ||||||||||||||||    
T  38137929 atgtaagatgttgttt 38137944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 359
Target Start/End: Original strand, 44561793 - 44561903
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    |||||||||||||||||   || ||||||||||||  ||||||| ||||||||||||||||||||||||||||||  ||||||||||||| ||  |||||    
T  44561793 cgtttcaaaatacatgttgcatgtttgcaatgtgcactattcacatgacttactttgaccatactttttaactaacatataaatacaaatgttgacatgt 44561892  T
Q  349 aagatgttgtt 359  Q
    |||||||||||    
T  44561893 aagatgttgtt 44561903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 247 - 329
Target Start/End: Original strand, 45613580 - 45613662
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtata 329  Q
    ||||||||||||| |||||||||||||||||||||||  |||| ||||||||||||||||| |||||||||||||||||||||    
T  45613580 tccgtttcaaaattcatgtccaatttttgcaatgtgcactatttacttgacttactttgactatactttttaactaatgtata 45613662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 25527411 - 25527520
Alignment:
Q  245 tctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 344  Q
    |||||||||| |||||||||||  ||||||||||||||   ||||||| |||||||||| ||||||| ||||||||| || ||||||||||||||||| |    
T  25527411 tctccgtttcgaaatacatgtcgcatttttgcaatgtga--tattcacatgacttacttcgaccatattttttaactgatatataaatacaaatattaac 25527508  T
Q  345 atgtaagatgtt 356  Q
    ||||||||||||    
T  25527509 atgtaagatgtt 25527520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 15333058 - 15332948
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||| ||||||||||||  | |||| ||||||||  ||||||| |  ||| ||||||||| | |||||||||||| ||||||||||||| ||||||||||    
T  15333058 gttttaaaatacatgtcgcaattttacaatgtgcactattcacatagcttgctttgaccaaattttttaactaatatataaatacaaatgttagcatgta 15332959  T
Q  350 agatgttgttt 360  Q
    |||||||||||    
T  15332958 agatgttgttt 15332948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 48334783 - 48334663
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| |||||||| ||||||||| ||  | |||| |||||| | |||||||| |   ||||||| |||||  |||||||||| | |||||||||||||    
T  48334783 ttactccctccgttttaaaatacatctcgtaattttacaatgtacattattcacatagtttactttaaccattttttttaacta-tatataaatacaaat 48334685  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  48334684 attagcatgtaagatgttgttt 48334663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 52167240 - 52167329
Alignment:
Q  271 ttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||| ||||||  |||||||  ||||||  |||||||||||||||||| |||| |||||||||||||||||  ||||||||||||||||    
T  52167240 ttttgtaatgtgtattattcatatgacttcttttgaccatactttttaattaatatataaatacaaatattaatatgtaagatgttgttt 52167329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 41253015 - 41252909
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    ||||||||||| |||||  | |||| ||||||||  ||||||  |  |||||||| |||||| |||||||||||| ||||||||||||| ||||||| ||    
T  41253015 gtttcaaaatatatgtcgcaattttacaatgtgcactattcatatagcttactttaaccatattttttaactaatatataaatacaaatgttagcatata 41252916  T
Q  350 agatgtt 356  Q
    |||||||    
T  41252915 agatgtt 41252909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 44856400 - 44856465
Alignment:
Q  294 tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||||||||| || |||||||||||||||  ||||||||||||| |||| |||||||||||||||    
T  44856400 tgacttactttaactatactttttaactaacatataaatacaaatgttagtatgtaagatgttgtt 44856465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 3430480 - 3430420
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgtt 356  Q
    |||||||||||||||| |||||||||||| ||| |||| |||||||||||||||| |||||    
T  3430480 acttactttgaccatattttttaactaatatattaataaaaatattagcatgtaaaatgtt 3430420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 360
Target Start/End: Complemental strand, 41751613 - 41751552
Alignment:
Q  299 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||| |||| |||||||||||| ||||||||||||| ||||||| || ||||||||||    
T  41751613 tactttgatcatattttttaactaatatataaatacaaatgttagcatttacgatgttgttt 41751552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 22786636 - 22786748
Alignment:
Q  246 ctccgtttcaaaatacatgtc-caatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 344  Q
    |||||||||||| |||||||| ||||||||  |||||||  ||||||| |  |||||||||||  || |||||||||||| |||||  |||||| || ||    
T  22786636 ctccgtttcaaactacatgtcgcaattttt-taatgtgcactattcacatagcttactttgactctattttttaactaatatataa--acaaatgtttgc 22786732  T
Q  345 atgtaagatgttgttt 360  Q
    ||||||||||||||||    
T  22786733 atgtaagatgttgttt 22786748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 32220870 - 32220930
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgac 307  Q
    ||||||| |||||||||||  |||||||||||||||   ||||||||||||||||||||||    
T  32220870 tccgttttaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgac 32220930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 17643789 - 17643851
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||| |||| ||| |||||||||||| | ||||||||||| |||||||||||||| ||||||    
T  17643789 ttactgtgactatattttttaactaatatgtaaatacaaatgttagcatgtaagatattgttt 17643851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 33128125 - 33128063
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgt 358  Q
    ||||| ||||| |||||||||||||||||  ||||||| |||||||| |||||||||| ||||    
T  33128125 acttattttgatcatactttttaactaatacataaatataaatattaacatgtaagatattgt 33128063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 360
Target Start/End: Original strand, 22782272 - 22782384
Alignment:
Q  246 ctccgtttcaaaatacatgtc-caatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagc 344  Q
    |||||||||||| |||||||| ||||||||  |||||||  ||||||| |  |||||||||||  || |||||||||||  |||||  |||||| || ||    
T  22782272 ctccgtttcaaactacatgtcgcaattttt-taatgtgcactattcacatagcttactttgactctattttttaactaaaatataa--acaaatgtttgc 22782368  T
Q  345 atgtaagatgttgttt 360  Q
    ||||||||||||||||    
T  22782369 atgtaagatgttgttt 22782384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 356
Target Start/End: Complemental strand, 23940624 - 23940508
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    |||||||||||||| ||||||||||||  | |||| ||| |||   | ||||  | | |||| |||||| || |||||||||||| |||||||| ||||     
T  23940624 tactctctccgttttaaaatacatgtcgcaattttacaacgtgtacttttcatataatttacattgaccttattttttaactaatatataaataaaaatg 23940525  T
Q  340 ttagcatgtaagatgtt 356  Q
    ||| |||||||||||||    
T  23940524 ttaacatgtaagatgtt 23940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 359
Target Start/End: Original strand, 30057310 - 30057418
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    |||||||||||||||   |||||  ||| || | |||||||| | || |||||| |||||| |||||||||||| ||||||  ||||| ||||||| |||    
T  30057310 tttcaaaatacatgtagtattttgacaacgttcattattcacataacatactttaaccatattttttaactaatatataaaagcaaatgttagcatataa 30057409  T
Q  351 gatgttgtt 359  Q
    |||| ||||    
T  30057410 gatgatgtt 30057418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 359
Target Start/End: Complemental strand, 42469713 - 42469610
Alignment:
Q  255 aaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 354  Q
    ||||||||||||  |||||| ||||| || |||||||| ||||||| ||| ||| || ||||||| |||| | ||||||||||  ||| ||| |||||||    
T  42469713 aaaatacatgtcgcattttttcaatgcgcattattcacgtgacttaatttaaccgtattttttaattaatatgtaaatacaaa-cttaacatataagatg 42469615  T
Q  355 ttgtt 359  Q
    |||||    
T  42469614 ttgtt 42469610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 359
Target Start/End: Complemental strand, 1327538 - 1327455
Alignment:
Q  276 caatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||| ||| ||||| ||||||  ||||||||||||||||||  |||||| || ||| | ||||| || ||||||||||||||||    
T  1327538 caatatgcattattgacttgatatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgtt 1327455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 359
Target Start/End: Complemental strand, 18659278 - 18659195
Alignment:
Q  276 caatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    |||| ||| ||||| ||||||  ||||||||||||||||||  ||||||  ||||| | ||||| || ||||||||||||||||    
T  18659278 caatatgcattattgacttgatatactttgaccatacttttctactaattcataaagataaataatatcatgtaagatgttgtt 18659195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 23224361 - 23224306
Alignment:
Q  298 ttactttgaccatacttttt-aactaatgtataaatacaaatattagcatgtaaga 352  Q
    |||||||||| ||||||||| ||||||| ||||||| |||||||||| ||||||||    
T  23224361 ttactttgactatacttttttaactaatatataaatgcaaatattagaatgtaaga 23224306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 360
Target Start/End: Complemental strand, 15568135 - 15568077
Alignment:
Q  302 tttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||| |||| |||||||||||| ||||||||||||| ||| | |||||||| ||||||    
T  15568135 tttgatcatattttttaactaatatataaatacaaatgttaccgtgtaagatattgttt 15568077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 21907213 - 21907139
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  21907213 ttattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgtt 21907139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 351
Target Start/End: Original strand, 3017853 - 3017902
Alignment:
Q  302 tttgaccatactttttaactaatgtataaatacaaatattagcatgtaag 351  Q
    |||||||||| |||||||||| | ||||||||||||| ||||||| ||||    
T  3017853 tttgaccatattttttaactattatataaatacaaatgttagcatataag 3017902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Original strand, 44276774 - 44276803
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtcca 268  Q
    ||||||||||||||||||||||||||||||    
T  44276774 ttactctctccgtttcaaaatacatgtcca 44276803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 47164659 - 47164598
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaa-tacaaatattagcatgtaagatgtt 356  Q
    ||||||||| | |||| |||||||||||| |||||| ||||||| |||| ||||||||||||    
T  47164659 acttactttaatcatattttttaactaatatataaaatacaaatgttagtatgtaagatgtt 47164598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 19327546 - 19327474
Alignment:
Q  286 tattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgt 358  Q
    ||||||| | ||||||||  |||||| ||||||||||||  ||| |||||||| |||| || |||||||||||    
T  19327546 tattcacataacttacttaaaccatattttttaactaatagatagatacaaatgttaggatctaagatgttgt 19327474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 345
Target Start/End: Complemental strand, 27813493 - 27813445
Alignment:
Q  297 cttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    |||| |||||| ||| |||||||||||| ||||||||||||| ||||||    
T  27813493 cttattttgactatattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 32273718 - 32273794
Alignment:
Q  248 ccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaat 324  Q
    |||||||||||||||||||  | |||  |||||||| |||||||| |   ||||||||| |||| ||||||||||||    
T  32273718 ccgtttcaaaatacatgtcgtaatttcacaatgtgcattattcacatagtttactttgatcatattttttaactaat 32273794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 978077 - 978197
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  978077 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 978176  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  978177 ttagcatgtaagatgttgttt 978197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 8086292 - 8086172
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  8086292 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaata 8086193  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    ||| |||||||||||||||||    
T  8086192 ttaacatgtaagatgttgttt 8086172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 246 - 360
Target Start/End: Complemental strand, 14634413 - 14634299
Alignment:
Q  246 ctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagca 345  Q
    ||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  14634413 ctccgtttcaaaatacatgtccaatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattagca 14634314  T
Q  346 tgtaagatgttgttt 360  Q
    |||||||||||||||    
T  14634313 tgtaagatgttgttt 14634299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 18094343 - 18094223
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| |  |||||||||||||||||||||||||||||||    
T  18094343 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaatacaaata 18094244  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  18094243 ttagcatgtaagatgttgttt 18094223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 33387220 - 33387340
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  33387220 tactccctccattttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaata 33387319  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  33387320 ttagcatgtaagatgttgttt 33387340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 33587721 - 33587611
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  33587721 gtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaaatattaacatgta 33587622  T
Q  350 agatgttgttt 360  Q
    |||||||||||    
T  33587621 agatgttgttt 33587611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 9502889 - 9502769
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| |||||||||||  ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  9502889 tactccctccgttttaaaatacatgtttaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 9502790  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  9502789 ttagcatgtaagatgttgttt 9502769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 40156198 - 40156318
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||  ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  40156198 tactccctccgtttcaaaatacatatccaacttttgcaatgtgcactattcacttgacttacttttaccataatttttaattaatgtataaatacaaata 40156297  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  40156298 ttagcatgtaagatgttgttt 40156318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 249 - 360
Target Start/End: Complemental strand, 3472530 - 3472419
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    ||||||||||||||||| |||||||||||||||||  |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  3472530 cgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgt 3472431  T
Q  349 aagatgttgttt 360  Q
    ||||||||||||    
T  3472430 aagatgttgttt 3472419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 249 - 360
Target Start/End: Complemental strand, 30355127 - 30355016
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    ||||||||||||||||||||||||||||||| |||  ||||||||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  30355127 cgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaatattagcatgt 30355028  T
Q  349 aagatgttgttt 360  Q
    ||||||||||||    
T  30355027 aagatgttgttt 30355016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 11785988 - 11785867
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatac-aaat 338  Q
    |||||||| | |||||||||||||||  |||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  11785988 tactctcttcatttcaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaatacaaaat 11785889  T
Q  339 attagcatgtaagatgttgttt 360  Q
    |||| |||||||||||||||||    
T  11785888 attaccatgtaagatgttgttt 11785867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 240 - 353
Target Start/End: Original strand, 34111962 - 34112075
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||    
T  34111962 tactctctccgtttcaaaatacatgtctagtttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaatacaaata 34112061  T
Q  340 ttagcatgtaagat 353  Q
    ||| ||||||||||    
T  34112062 ttatcatgtaagat 34112075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 252 - 356
Target Start/End: Original strand, 11251126 - 11251230
Alignment:
Q  252 ttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaag 351  Q
    ||||||||| ||||| || |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11251126 ttcaaaatatatgtctaacttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtacg 11251225  T
Q  352 atgtt 356  Q
    |||||    
T  11251226 atgtt 11251230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 24992401 - 24992280
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| |||||||||||||||||||||  | |||| ||||||||  ||||||| |  ||||||||||||||| |||||||||||| |||||||||||||    
T  24992401 ttactccctccgtttcaaaatacatgtcatagttttacaatgtgcactattcacatagcttactttgaccatattttttaactaatttataaatacaaat 24992302  T
Q  339 attagcatgtaagatgttgttt 360  Q
    |||||||| |||||||||||||    
T  24992301 attagcatataagatgttgttt 24992280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 250 - 360
Target Start/End: Original strand, 7224175 - 7224285
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||| ||||||||||| || |||||||||||||   |||| | ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  7224175 gttttaaaatacatgttcattttttgcaatgtgtactatttaattgacttactttgaccatactttctaactaatttataaatacaaatattagcatgta 7224274  T
Q  350 agatgttgttt 360  Q
    | |||||||||    
T  7224275 aaatgttgttt 7224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 356
Target Start/End: Complemental strand, 38916512 - 38916396
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||||  ||||||||| | |||  ||||||| |||||| |||||||||||||||||||||||  |||||||||||||     
T  38916512 tactccctccgtttcaaaatacatgtcgcatttttgcagtatgcactattcacatgacttgctttgaccatactttttaactaacatataaatacaaatg 38916413  T
Q  340 ttagcatgtaagatgtt 356  Q
    ||||||||| |||||||    
T  38916412 ttagcatgtgagatgtt 38916396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 9050828 - 9050718
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||  ||||||||| |||||||||           |||||||||||||||||||||||    
T  9050828 ttactccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttaacttacttt-----------ttaactaatgtataaatacaaat 9050740  T
Q  339 attagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||    
T  9050739 attagcatgtaagatgttgttt 9050718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 20692651 - 20692541
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||||||| |||| |||||||| |||  ||||||||||||||| |||| |||||||| || ||||||||||||||||||| ||  ||||||||||||||    
T  20692651 tactctctctgttttaaaatacacgtcacatttttgcaatgtgcattatccacttgacgtattttgaccatactttttaaccaa--tataaatacaaata 20692554  T
Q  340 ttagcatgtaaga 352  Q
    ||| |||||||||    
T  20692553 ttaacatgtaaga 20692541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 360
Target Start/End: Original strand, 27109689 - 27109808
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    |||||||| | |||||||||| || |  ||||||| |||| ||  ||||||| ||||||||||||||  ||||||||||| ||||||| |||||||||||    
T  27109689 tactctcttcatttcaaaatatatatttaatttttacaatatgtattattcatttgacttactttgat-atactttttaattaatgtaaaaatacaaata 27109787  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  27109788 ttagcatgtaagatgttgttt 27109808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 12447626 - 12447560
Alignment:
Q  292 cttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  12447626 cttgacttactttgaccatactttttaactaatgtttaaatac--atattagcatgtaagatgttgttt 12447560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 356
Target Start/End: Original strand, 39776641 - 39776746
Alignment:
Q  251 tttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 350  Q
    ||||||||||||| ||  ||||||||||||| |  ||||||| | ||||| ||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  39776641 tttcaaaatacatttcgtatttttgcaatgtacactattcacataacttattttgaccgtactttttaactaacatataaatacaaatattagcatgtaa 39776740  T
Q  351 gatgtt 356  Q
     |||||    
T  39776741 aatgtt 39776746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 12007894 - 12007774
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||||  ||||||  | |||||  |||| || ||||||| ||||||| |||||||||| |||| |||||||||||||     
T  12007894 tactccctccgtttcaaaatacatgtcgcatttttatattgtgcactatttacatgacttaatttgaccctactttttaattaatatataaatacaaatg 12007795  T
Q  340 ttagcatgtaagatgttgttt 360  Q
     |||||||||| |||||||||    
T  12007794 ctagcatgtaaaatgttgttt 12007774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 24916503 - 24916388
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatacttttt--aactaatgtataaatacaaatattagc 344  Q
    ||||||||||||||||||||  | |||| |||||||   ||||||| |  ||||||||||||||| |||||  ||||||| |||||||||||||||||||    
T  24916503 tccgtttcaaaatacatgtcacaattttacaatgtgtactattcacatagcttactttgaccatattttttttaactaatttataaatacaaatattagc 24916404  T
Q  345 atgtaagatgttgttt 360  Q
    || |||||||||||||    
T  24916403 atataagatgttgttt 24916388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 360
Target Start/End: Original strand, 11761125 - 11761186
Alignment:
Q  299 tactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  11761125 tactttgaccatattttttaactaatatataaatacaaatattaacatgtaagatgttgttt 11761186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 27579681 - 27579579
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 349  Q
    |||||||||||||||||  |||||||  |||||  ||||||| | |||||||||| || ||| |||||||||||| ||||||||||||| ||||||||||    
T  27579681 gtttcaaaatacatgtcacatttttgtgatgtgtattattcaat-gacttactttaactatattttttaactaatatataaatacaaatgttagcatgta 27579583  T
Q  350 agat 353  Q
    ||||    
T  27579582 agat 27579579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 32017259 - 32017330
Alignment:
Q  286 tattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttg 357  Q
    ||||||| | ||||||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||    
T  32017259 tattcacataacttactttgatcatattttttaactaatatataaatacaaatgttagcatgtaagatgttg 32017330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 32400400 - 32400447
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  32400400 tttttaactaatatataaatacaaatattagcatgtaagatgttgttt 32400447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 18598554 - 18598620
Alignment:
Q  250 gtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttt 316  Q
    |||||||||||||||||  ||||||||||||||| ||||| || ||| |||||||||||||||||||    
T  18598554 gtttcaaaatacatgtcgcatttttgcaatgtgcattattgacatgaattactttgaccatactttt 18598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 18998745 - 18998807
Alignment:
Q  298 ttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    ||||||| |||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  18998745 ttactttaaccatattttttaactaatatataaatacaaatgttagtatgtaagatgttgttt 18998807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 12456871 - 12456782
Alignment:
Q  271 ttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||| ||||||||  |||| || | ||||||||| | |||| |||||||||||| || |||||||||| |||| ||||||||||||||||    
T  12456871 ttttacaatgtgcactatttacataacttactttaatcatattttttaactaatatacaaatacaaatgttagtatgtaagatgttgttt 12456782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 3422429 - 3422355
Alignment:
Q  286 tattcacttgacttactttgaccata---ctttttaactaatgtataaatacaaatattagcatgtaagatgttg 357  Q
    ||||||| | |||||||||||| |||    |||||||||||| ||||||||||||| ||||||||||||||||||    
T  3422429 tattcacataacttactttgactatatttttttttaactaatatataaatacaaatgttagcatgtaagatgttg 3422355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 26387084 - 26387021
Alignment:
Q  297 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||| |||| |||||||||||  |||||||| |||| ||||||| |||||||||||||    
T  26387084 cttactttgatcatattttttaactaacatataaatataaatgttagcatttaagatgttgttt 26387021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 5212966 - 5213040
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||||||||||||    
T  5212966 ttattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgtt 5213040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 37495667 - 37495712
Alignment:
Q  297 cttactttgaccatactttttaactaatgtataaatacaaatatta 342  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||    
T  37495667 cttactttgatcatattttttaactaatatataaatacaaatatta 37495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 359
Target Start/End: Complemental strand, 10822301 - 10822238
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||||||||||| || ||||||||||||||||  || ||||| ||| ||| ||||||||||||    
T  10822301 acttactttgaccttattttttaactaatgtattgatgcaaatgttaacatataagatgttgtt 10822238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 12360010 - 12359963
Alignment:
Q  313 tttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||||||||||| ||||||||||||| |||||||| ||||| ||||||    
T  12360010 tttttaactaatatataaatacaaatgttagcatgaaagatattgttt 12359963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 4924882 - 4924956
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  4924882 ttattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgtt 4924956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 12448333 - 12448275
Alignment:
Q  241 actctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgactt 299  Q
    |||| ||||||||||||||||||||| |||||||| |||  ||  ||||||||||||||    
T  12448333 actccctccgtttcaaaatacatgtctaatttttgtaatacgcactattcacttgactt 12448275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 32002058 - 32002132
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  32002058 ttattgacttgacatactttgaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgtt 32002132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 162099 - 161979
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  162099 tactccctccgtttcaaaatacatgtctaatttttgtaatgtgcactattcacttgacttacattgaccatactttttaactaatgtataaatacaaata 162000  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  161999 ttagcatgtaagatgttgttt 161979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 100909 - 100789
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  100909 tactccctccgtttcaaaatacatgttcaacttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaata 100810  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    ||||| |||||||||||||||    
T  100809 ttagcgtgtaagatgttgttt 100789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 249 - 360
Target Start/End: Complemental strand, 68022 - 67911
Alignment:
Q  249 cgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 348  Q
    ||||||||||||||||||||||||||| |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  68022 cgtttcaaaatacatgtccaatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgt 67923  T
Q  349 aagatgttgttt 360  Q
    ||||||||||||    
T  67922 aagatgttgttt 67911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 89; Significance: 8e-43; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 240 - 360
Target Start/End: Complemental strand, 13979 - 13859
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 339  Q
    ||||| |||||||| |||||||||||| ||| |||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13979 tactccctccgttttaaaatacatgtctaatatttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaata 13880  T
Q  340 ttagcatgtaagatgttgttt 360  Q
    |||||||||||||||||||||    
T  13879 ttagcatgtaagatgttgttt 13859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 301
Target Start/End: Original strand, 9372 - 9433
Alignment:
Q  240 tactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttac 301  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  9372 tactccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttac 9433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 239 - 360
Target Start/End: Original strand, 70960 - 71080
Alignment:
Q  239 ttactctctccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 338  Q
    |||||| |||| ||||||||||||||||||||||||||||| |||  ||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  70960 ttactccctccatttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttattttgaccata-tttttaactaatgtataaatacaaat 71058  T
Q  339 attagcatgtaagatgttgttt 360  Q
    |||||||| |||||||||||||    
T  71059 attagcatttaagatgttgttt 71080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 9088 - 8975
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||| ||||||| ||  | |||| |||| ||| |||||||| | |||||||||||||| | |||||||||||| ||||||||||||| |||||||    
T  9088 tccgtttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcat 8989  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  8988 gtaagatgttgttt 8975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 138261 - 138172
Alignment:
Q  271 ttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||| |||| ||| |||||||| | |||||||||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  138261 ttttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatgttgttt 138172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 239 - 356
Target Start/End: Complemental strand, 28917 - 28798
Alignment:
Q  239 ttactctctccgtttcaaaa-tacatgtccaatttttgcaatgtgcgt-tattcacttgacttactttgaccatactttttaactaatgtataaatacaa 336  Q
    |||||| ||||||||||||| ||||||||  | |||| ||||||||   ||||||| |  ||||||||||||||| |||||||||||| |||||||||||    
T  28917 ttactccctccgtttcaaaaatacatgtcatagttttacaatgtgcaactattcacatagcttactttgaccatattttttaactaatttataaatacaa 28818  T
Q  337 atattagcatgtaagatgtt 356  Q
    |||||||||| |||||||||    
T  28817 atattagcatataagatgtt 28798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 360
Target Start/End: Original strand, 22787 - 22900
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 346  Q
    ||||||||| ||||||| ||  | |||| |||| ||| |||||||| | ||||| |||||||| | ||||||||| || ||||||||||||| |||||||    
T  22787 tccgtttcataatacatttcacaattttacaatatgcattattcacataacttattttgaccacattttttaactcatatataaatacaaatgttagcat 22886  T
Q  347 gtaagatgttgttt 360  Q
    ||||||||||||||    
T  22887 gtaagatgttgttt 22900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 4005 - 4061
Alignment:
Q  297 cttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 353  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  4005 cttactttgaccatattttttaactaatatataaatacaaatgttagcatgtaagat 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 296 - 359
Target Start/End: Original strand, 1576 - 1639
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||||| |||||    
T  1576 acttactttaatcatattttttaattaatgtataaatacaaatattagcatgtaagatattgtt 1639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 247 - 360
Target Start/End: Complemental strand, 217131 - 217017
Alignment:
Q  247 tccgtttcaaaatacatgtccaatttttgcaatgtgcgttattcacttgacttactttgaccatacttttt-aactaatgtataaatacaaatattagca 345  Q
    |||||||||||||||| |||  | |||| ||||||||  ||||| | | |||||  ||||||||| ||||| || |||| ||||||||||||| ||||||    
T  217131 tccgtttcaaaatacaagtcgcaattttacaatgtgcaatattctcataacttatgttgaccatatttttttaagtaatatataaatacaaatgttagca 217032  T
Q  346 tgtaagatgttgttt 360  Q
    | |||||||||||||    
T  217031 tataagatgttgttt 217017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 53626 - 53562
Alignment:
Q  296 acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgttt 360  Q
    |||| |||||| |||| |||||||||||| ||||| ||||||| |||||||| ||||||||||||    
T  53626 acttgctttgatcatattttttaactaatatataattacaaattttagcatgcaagatgttgttt 53562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 14276 - 14202
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  |||||| || ||| | ||||| || ||||||||||||||||    
T  14276 ttattgacttgacatactttgaccatacttttctactaatttacaaagataaataatatcatgtaagatgttgtt 14202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 10610 - 10536
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  10610 ttattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgtt 10536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 12969 - 12895
Alignment:
Q  285 ttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||| ||||||| ||||||||||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  12969 ttattgacttgacatactttgaccatacttttctactaattcacaaagataaataatatcatgtaagatgttgtt 12895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 268
Target Start/End: Complemental strand, 176 - 148
Alignment:
Q  240 tactctctccgtttcaaaatacatgtcca 268  Q
    |||||||||||||||||||||||||||||    
T  176 tactctctccgtttcaaaatacatgtcca 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 41259 - 41335
Alignment:
Q  283 cgttattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatgttgtt 359  Q
    ||||||| ||||||| |||||| |||||||||||  ||||||  | ||| | ||||| || ||||||||||||||||    
T  41259 cgttattgacttgacatactttaaccatacttttatactaattcacaaagataaataatatcatgtaagatgttgtt 41335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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