View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8221_low_9 (Length: 345)

Name: NF8221_low_9
Description: NF8221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8221_low_9
NF8221_low_9
[»] chr3 (64 HSPs)
chr3 (1-336)||(16831533-16831868)
chr3 (1-336)||(16384377-16384712)
chr3 (1-336)||(13944813-13945148)
chr3 (1-336)||(8744395-8744730)
chr3 (1-329)||(31941692-31942020)
chr3 (1-329)||(31692197-31692525)
chr3 (1-329)||(17189163-17189491)
chr3 (1-329)||(24190093-24190420)
chr3 (1-329)||(12357539-12357867)
chr3 (1-329)||(16825291-16825619)
chr3 (22-335)||(10408778-10409091)
chr3 (22-335)||(47126754-47127067)
chr3 (66-330)||(14290543-14290807)
chr3 (49-329)||(18131359-18131639)
chr3 (1-330)||(35982970-35983299)
chr3 (22-335)||(28757129-28757442)
chr3 (5-329)||(11958193-11958517)
chr3 (1-329)||(12181133-12181461)
chr3 (1-335)||(16326713-16327049)
chr3 (55-329)||(12857508-12857782)
chr3 (1-330)||(17494436-17494768)
chr3 (43-281)||(13317629-13317867)
chr3 (49-159)||(11949107-11949217)
chr3 (140-330)||(15230531-15230721)
chr3 (140-330)||(15236399-15236589)
chr3 (22-230)||(15008695-15008900)
chr3 (40-203)||(12501751-12501914)
chr3 (242-293)||(3688960-3689011)
chr3 (250-296)||(10008625-10008671)
chr3 (250-296)||(10909235-10909281)
chr3 (141-287)||(19727679-19727825)
chr3 (34-203)||(11861165-11861334)
chr3 (242-293)||(5421992-5422043)
chr3 (214-329)||(12508577-12508692)
chr3 (250-293)||(20059116-20059159)
chr3 (142-228)||(2037025-2037111)
chr3 (142-228)||(2040766-2040852)
chr3 (247-293)||(6597077-6597123)
chr3 (247-293)||(6603757-6603803)
chr3 (247-293)||(12889731-12889777)
chr3 (247-293)||(13255712-13255758)
chr3 (142-228)||(14039676-14039762)
chr3 (247-293)||(15586454-15586500)
chr3 (247-293)||(16638795-16638841)
chr3 (247-293)||(16753763-16753809)
chr3 (141-203)||(23079166-23079228)
chr3 (247-293)||(43165697-43165743)
chr3 (247-293)||(48428469-48428515)
chr3 (141-281)||(23414861-23415001)
chr3 (242-293)||(15345307-15345358)
chr3 (250-293)||(15399580-15399623)
chr3 (250-293)||(15713118-15713161)
chr3 (141-203)||(15065990-15066052)
chr3 (256-293)||(26790475-26790512)
chr3 (256-293)||(53382081-53382118)
chr3 (257-293)||(24186222-24186258)
chr3 (148-287)||(12843168-12843307)
chr3 (250-293)||(15359077-15359120)
chr3 (148-203)||(17497617-17497672)
chr3 (59-161)||(10417225-10417327)
chr3 (141-203)||(16695083-16695145)
chr3 (301-330)||(2245683-2245712)
chr3 (151-203)||(14873734-14873786)
chr3 (148-284)||(15262556-15262692)
[»] chr8 (27 HSPs)
chr8 (5-336)||(22054093-22054424)
chr8 (1-329)||(22027507-22027835)
chr8 (5-335)||(31413753-31414083)
chr8 (22-335)||(16268445-16268758)
chr8 (22-335)||(28984158-28984471)
chr8 (22-330)||(19985427-19985735)
chr8 (64-329)||(22374158-22374423)
chr8 (67-330)||(21928720-21928983)
chr8 (5-329)||(29300653-29300977)
chr8 (143-330)||(20391454-20391641)
chr8 (148-306)||(22523883-22524041)
chr8 (242-296)||(19481335-19481389)
chr8 (1-230)||(6606795-6607024)
chr8 (141-293)||(30310407-30310559)
chr8 (242-293)||(17671288-17671339)
chr8 (250-293)||(19115872-19115915)
chr8 (250-293)||(20015529-20015572)
chr8 (256-293)||(22117441-22117478)
chr8 (141-293)||(15536749-15536901)
chr8 (151-203)||(21163883-21163935)
chr8 (250-293)||(18860049-18860092)
chr8 (148-203)||(21391214-21391269)
chr8 (148-203)||(21780540-21780595)
chr8 (250-293)||(22126225-22126268)
chr8 (141-294)||(32603511-32603664)
chr8 (242-293)||(21671982-21672033)
chr8 (219-299)||(3274550-3274629)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-336)||(9567-9902)
[»] scaffold0003 (3 HSPs)
scaffold0003 (1-336)||(203570-203905)
scaffold0003 (250-326)||(424746-424822)
scaffold0003 (22-91)||(424518-424587)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-336)||(263415-263750)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-329)||(40247-40575)
[»] chr7 (40 HSPs)
chr7 (60-330)||(14144870-14145140)
chr7 (1-329)||(14283145-14283473)
chr7 (1-336)||(18050717-18051052)
chr7 (22-329)||(11385200-11385507)
chr7 (1-329)||(15099374-15099702)
chr7 (1-326)||(12712437-12712762)
chr7 (5-329)||(12798275-12798596)
chr7 (22-330)||(19150182-19150490)
chr7 (22-330)||(20749581-20749889)
chr7 (22-329)||(16947243-16947550)
chr7 (22-335)||(26091563-26091876)
chr7 (22-335)||(40924582-40924895)
chr7 (1-335)||(21755562-21755896)
chr7 (22-335)||(49155472-49155785)
chr7 (23-329)||(14261017-14261323)
chr7 (22-335)||(26115355-26115668)
chr7 (1-299)||(13676601-13676899)
chr7 (4-329)||(12459781-12460106)
chr7 (22-335)||(13965433-13965746)
chr7 (5-335)||(13024498-13024828)
chr7 (169-326)||(13004783-13004940)
chr7 (1-94)||(14140829-14140922)
chr7 (140-330)||(12203570-12203760)
chr7 (139-329)||(15627811-15628001)
chr7 (141-293)||(9591653-9591805)
chr7 (250-293)||(12690896-12690939)
chr7 (250-293)||(15157889-15157932)
chr7 (247-293)||(8710997-8711043)
chr7 (247-291)||(10873853-10873897)
chr7 (250-293)||(11234045-11234088)
chr7 (250-293)||(11549934-11549977)
chr7 (250-293)||(44788183-44788226)
chr7 (247-293)||(14335788-14335834)
chr7 (141-203)||(16726360-16726422)
chr7 (141-203)||(17703374-17703436)
chr7 (247-293)||(18587003-18587049)
chr7 (250-293)||(13689436-13689479)
chr7 (250-293)||(14957903-14957946)
chr7 (139-293)||(11984279-11984433)
chr7 (250-296)||(18181138-18181184)
[»] scaffold0348 (2 HSPs)
scaffold0348 (1-329)||(17271-17599)
scaffold0348 (1-325)||(4640-4964)
[»] scaffold0765 (1 HSPs)
scaffold0765 (1-336)||(6037-6372)
[»] chr5 (42 HSPs)
chr5 (1-336)||(17266293-17266628)
chr5 (22-335)||(22505774-22506087)
chr5 (141-330)||(21870243-21870432)
chr5 (141-330)||(21874523-21874712)
chr5 (5-335)||(23077865-23078195)
chr5 (22-335)||(14883951-14884264)
chr5 (22-335)||(25851167-25851480)
chr5 (1-329)||(23563134-23563462)
chr5 (22-335)||(20345377-20345690)
chr5 (148-329)||(21983143-21983324)
chr5 (64-293)||(23669769-23669998)
chr5 (1-230)||(43122541-43122770)
chr5 (247-296)||(27521741-27521790)
chr5 (148-287)||(21561033-21561172)
chr5 (141-203)||(18782346-18782408)
chr5 (214-326)||(23474499-23474611)
chr5 (250-293)||(14996744-14996787)
chr5 (250-293)||(22138006-22138049)
chr5 (250-293)||(22329892-22329935)
chr5 (242-293)||(27665508-27665559)
chr5 (250-293)||(27682405-27682448)
chr5 (242-293)||(40712110-40712161)
chr5 (142-228)||(16258103-16258189)
chr5 (247-293)||(16359837-16359883)
chr5 (142-228)||(22591822-22591908)
chr5 (142-228)||(22595377-22595463)
chr5 (247-293)||(34569829-34569875)
chr5 (40-336)||(23461102-23461398)
chr5 (73-161)||(20779059-20779147)
chr5 (151-203)||(23526293-23526345)
chr5 (250-293)||(19773298-19773341)
chr5 (151-294)||(21883017-21883160)
chr5 (250-293)||(27613694-27613737)
chr5 (250-293)||(41774180-41774223)
chr5 (159-287)||(21331997-21332125)
chr5 (139-287)||(21631407-21631555)
chr5 (73-161)||(22465096-22465184)
chr5 (250-293)||(22351257-22351300)
chr5 (148-287)||(26735736-26735875)
chr5 (250-293)||(29473078-29473121)
chr5 (250-293)||(37288501-37288544)
chr5 (141-335)||(21410366-21410560)
[»] chr2 (31 HSPs)
chr2 (1-329)||(19716341-19716669)
chr2 (1-329)||(19720904-19721232)
chr2 (1-336)||(12577144-12577479)
chr2 (1-329)||(23097342-23097670)
chr2 (1-326)||(23274384-23274709)
chr2 (22-335)||(20848401-20848711)
chr2 (22-293)||(28350687-28350958)
chr2 (64-325)||(21901391-21901652)
chr2 (69-203)||(24657108-24657242)
chr2 (141-286)||(23116426-23116571)
chr2 (244-293)||(44382933-44382982)
chr2 (40-203)||(11351161-11351324)
chr2 (250-293)||(17002037-17002080)
chr2 (242-293)||(22322705-22322756)
chr2 (250-293)||(24265407-24265450)
chr2 (242-293)||(24713063-24713114)
chr2 (247-293)||(9338616-9338662)
chr2 (247-293)||(9487250-9487296)
chr2 (250-296)||(10871887-10871933)
chr2 (247-293)||(16984274-16984320)
chr2 (141-203)||(22462931-22462993)
chr2 (141-202)||(23205245-23205306)
chr2 (141-202)||(23676849-23676910)
chr2 (151-197)||(21320459-21320505)
chr2 (247-293)||(27374303-27374349)
chr2 (256-293)||(16931598-16931635)
chr2 (75-203)||(24704932-24705060)
chr2 (139-275)||(24817218-24817354)
chr2 (250-293)||(24874113-24874156)
chr2 (151-203)||(23028912-23028963)
chr2 (151-203)||(24678428-24678480)
[»] scaffold0222 (2 HSPs)
scaffold0222 (1-336)||(267-602)
scaffold0222 (1-329)||(21003-21331)
[»] chr4 (38 HSPs)
chr4 (1-336)||(53750247-53750582)
chr4 (1-336)||(51603569-51603904)
chr4 (1-329)||(14993151-14993479)
chr4 (34-329)||(16150829-16151124)
chr4 (34-329)||(16154975-16155270)
chr4 (1-329)||(15266936-15267264)
chr4 (1-335)||(20893191-20893525)
chr4 (22-335)||(3261572-3261885)
chr4 (29-325)||(18259629-18259925)
chr4 (64-329)||(15073582-15073847)
chr4 (22-335)||(7357448-7357761)
chr4 (22-335)||(11204010-11204323)
chr4 (22-335)||(29450315-29450628)
chr4 (22-335)||(44658644-44658957)
chr4 (22-207)||(27903566-27903751)
chr4 (148-330)||(14697408-14697590)
chr4 (22-326)||(13879290-13879594)
chr4 (142-332)||(8708978-8709168)
chr4 (141-294)||(18604378-18604531)
chr4 (141-293)||(13513650-13513802)
chr4 (242-293)||(8389810-8389861)
chr4 (148-287)||(8343-8482)
chr4 (250-293)||(8050186-8050229)
chr4 (250-293)||(14300542-14300585)
chr4 (242-293)||(19775356-19775407)
chr4 (242-293)||(23959145-23959196)
chr4 (242-293)||(27714734-27714785)
chr4 (247-293)||(12480003-12480049)
chr4 (247-293)||(16233555-16233601)
chr4 (247-293)||(17091712-17091758)
chr4 (141-203)||(18224123-18224185)
chr4 (148-281)||(16219495-16219628)
chr4 (148-281)||(16222815-16222948)
chr4 (148-287)||(15602-15741)
chr4 (250-293)||(14683973-14684016)
chr4 (250-293)||(40476446-40476489)
chr4 (242-294)||(14162871-14162923)
chr4 (250-293)||(19635542-19635585)
[»] scaffold0067 (4 HSPs)
scaffold0067 (1-329)||(64389-64717)
scaffold0067 (1-329)||(48967-49295)
scaffold0067 (1-329)||(58001-58329)
scaffold0067 (1-329)||(29813-30141)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-335)||(53204-53538)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-326)||(98373-98698)
scaffold0020 (64-329)||(176239-176504)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-329)||(22311-22639)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-329)||(164188-164516)
scaffold0023 (151-203)||(30487-30539)
[»] scaffold0034 (3 HSPs)
scaffold0034 (23-326)||(11696-11999)
scaffold0034 (1-329)||(1739-2067)
scaffold0034 (22-207)||(70582-70767)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-336)||(8242-8577)
scaffold0235 (1-336)||(18456-18791)
[»] chr6 (41 HSPs)
chr6 (1-299)||(19438026-19438324)
chr6 (1-329)||(14376845-14377173)
chr6 (1-329)||(21566920-21567248)
chr6 (1-328)||(18797714-18798041)
chr6 (1-326)||(34642517-34642843)
chr6 (22-329)||(24515343-24515650)
chr6 (4-329)||(10465777-10466102)
chr6 (22-335)||(24367445-24367758)
chr6 (152-329)||(25771019-25771196)
chr6 (22-281)||(21474645-21474904)
chr6 (28-326)||(19456074-19456372)
chr6 (28-326)||(19466219-19466517)
chr6 (169-326)||(19881588-19881745)
chr6 (117-330)||(19486222-19486435)
chr6 (148-287)||(23081594-23081733)
chr6 (142-239)||(16813805-16813902)
chr6 (142-230)||(8720733-8720821)
chr6 (219-329)||(18660161-18660271)
chr6 (242-296)||(28312892-28312946)
chr6 (76-329)||(15462435-15462688)
chr6 (141-330)||(30677952-30678141)
chr6 (250-293)||(25115822-25115865)
chr6 (247-293)||(16575157-16575203)
chr6 (247-293)||(16620177-16620223)
chr6 (77-198)||(27559029-27559150)
chr6 (247-296)||(28260162-28260211)
chr6 (247-296)||(28285705-28285754)
chr6 (247-296)||(28338911-28338960)
chr6 (73-161)||(20010599-20010687)
chr6 (250-293)||(22829354-22829397)
chr6 (250-293)||(24292750-24292793)
chr6 (247-293)||(29589407-29589453)
chr6 (259-296)||(27205901-27205938)
chr6 (259-296)||(27243290-27243327)
chr6 (250-293)||(2871770-2871813)
chr6 (250-293)||(5836196-5836239)
chr6 (141-292)||(21764976-21765127)
chr6 (153-203)||(25756670-25756720)
chr6 (301-329)||(21474908-21474936)
chr6 (151-203)||(22437043-22437095)
chr6 (148-287)||(25958724-25958863)
[»] scaffold0074 (1 HSPs)
scaffold0074 (22-329)||(15282-15589)
[»] scaffold0664 (1 HSPs)
scaffold0664 (53-329)||(7279-7555)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-336)||(54236-54571)
[»] scaffold1914 (1 HSPs)
scaffold1914 (100-336)||(1010-1246)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-325)||(8803-9127)
[»] scaffold1299 (1 HSPs)
scaffold1299 (1-329)||(1635-1963)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-329)||(332-660)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-329)||(37128-37456)
[»] scaffold0010 (4 HSPs)
scaffold0010 (1-329)||(39120-39448)
scaffold0010 (141-293)||(14753-14905)
scaffold0010 (59-202)||(180753-180896)
scaffold0010 (148-326)||(5251-5429)
[»] chr1 (32 HSPs)
chr1 (1-329)||(21742408-21742736)
chr1 (1-329)||(22015601-22015929)
chr1 (1-329)||(20832757-20833084)
chr1 (5-335)||(24096465-24096795)
chr1 (1-329)||(21738892-21739220)
chr1 (1-335)||(21961233-21961567)
chr1 (25-311)||(52988971-52989257)
chr1 (22-335)||(31536847-31537160)
chr1 (1-335)||(20074559-20074893)
chr1 (22-335)||(48426100-48426413)
chr1 (22-335)||(38909676-38909989)
chr1 (2-326)||(19857481-19857805)
chr1 (22-335)||(20297610-20297923)
chr1 (22-335)||(37680276-37680589)
chr1 (139-326)||(16379407-16379594)
chr1 (73-326)||(18273045-18273298)
chr1 (141-294)||(21228447-21228600)
chr1 (242-296)||(41350560-41350614)
chr1 (181-293)||(21045046-21045158)
chr1 (242-293)||(16347490-16347541)
chr1 (242-293)||(16354138-16354189)
chr1 (250-296)||(51330384-51330430)
chr1 (73-326)||(20853619-20853872)
chr1 (242-293)||(33387924-33387975)
chr1 (214-326)||(22117102-22117214)
chr1 (143-294)||(17041907-17042057)
chr1 (250-293)||(19109791-19109834)
chr1 (250-293)||(21833723-21833766)
chr1 (244-306)||(21752465-21752527)
chr1 (250-293)||(21842633-21842676)
chr1 (250-293)||(22400741-22400784)
chr1 (244-294)||(22402010-22402060)
[»] scaffold0751 (1 HSPs)
scaffold0751 (22-330)||(5391-5698)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-329)||(50294-50622)
[»] scaffold0053 (3 HSPs)
scaffold0053 (1-330)||(62558-62887)
scaffold0053 (1-203)||(65211-65413)
scaffold0053 (224-329)||(65109-65214)
[»] scaffold1433 (1 HSPs)
scaffold1433 (1-329)||(1098-1426)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-329)||(4996-5324)
[»] scaffold0404 (1 HSPs)
scaffold0404 (1-329)||(7933-8261)
[»] scaffold0029 (4 HSPs)
scaffold0029 (1-277)||(115751-116027)
scaffold0029 (59-202)||(93808-93951)
scaffold0029 (250-293)||(107600-107643)
scaffold0029 (151-200)||(8553-8602)
[»] scaffold0523 (2 HSPs)
scaffold0523 (1-329)||(5629-5954)
scaffold0523 (22-335)||(11524-11837)
[»] scaffold0004 (2 HSPs)
scaffold0004 (51-329)||(319482-319760)
scaffold0004 (1-257)||(325896-326151)
[»] scaffold1032 (1 HSPs)
scaffold1032 (1-330)||(601-930)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-329)||(34526-34854)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-336)||(663-998)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-330)||(16826-17155)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-330)||(70297-70626)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-329)||(5994-6321)
[»] scaffold0017 (2 HSPs)
scaffold0017 (68-325)||(4244-4501)
scaffold0017 (34-203)||(16979-17148)
[»] scaffold1530 (1 HSPs)
scaffold1530 (107-326)||(799-1018)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-329)||(5242-5570)
[»] scaffold0102 (1 HSPs)
scaffold0102 (22-329)||(42908-43215)
[»] scaffold1426 (1 HSPs)
scaffold1426 (22-335)||(1388-1701)
[»] scaffold0243 (2 HSPs)
scaffold0243 (1-326)||(9562-9887)
scaffold0243 (148-287)||(23774-23913)
[»] scaffold0203 (2 HSPs)
scaffold0203 (1-206)||(764-969)
scaffold0203 (247-329)||(3838-3920)
[»] scaffold0041 (1 HSPs)
scaffold0041 (22-335)||(41945-42258)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-329)||(71-399)
[»] scaffold0011 (1 HSPs)
scaffold0011 (73-329)||(153753-154009)
[»] scaffold0192 (1 HSPs)
scaffold0192 (55-326)||(29770-30041)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-329)||(4091-4419)
[»] scaffold0118 (1 HSPs)
scaffold0118 (22-335)||(671-984)
[»] scaffold0518 (1 HSPs)
scaffold0518 (179-329)||(2198-2348)
[»] scaffold0151 (1 HSPs)
scaffold0151 (103-329)||(329-555)
[»] scaffold1517 (1 HSPs)
scaffold1517 (4-329)||(1274-1599)
[»] scaffold0001 (1 HSPs)
scaffold0001 (22-335)||(514134-514447)
[»] scaffold0434 (1 HSPs)
scaffold0434 (141-329)||(5689-5877)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-329)||(8808-9136)
[»] scaffold0031 (1 HSPs)
scaffold0031 (141-329)||(115953-116141)
[»] scaffold0026 (1 HSPs)
scaffold0026 (3-326)||(51842-52165)
[»] scaffold0865 (1 HSPs)
scaffold0865 (34-329)||(1059-1354)
[»] scaffold0133 (1 HSPs)
scaffold0133 (34-329)||(28072-28367)
[»] scaffold2062 (1 HSPs)
scaffold2062 (27-325)||(663-961)
[»] scaffold0317 (1 HSPs)
scaffold0317 (1-299)||(2820-3118)
[»] scaffold0310 (1 HSPs)
scaffold0310 (5-335)||(11170-11500)
[»] scaffold0261 (2 HSPs)
scaffold0261 (20-329)||(12201-12508)
scaffold0261 (20-329)||(20381-20688)
[»] scaffold0490 (1 HSPs)
scaffold0490 (162-329)||(3215-3382)
[»] scaffold0276 (1 HSPs)
scaffold0276 (49-335)||(23704-23990)
[»] scaffold0188 (1 HSPs)
scaffold0188 (146-335)||(33153-33342)
[»] scaffold0054 (2 HSPs)
scaffold0054 (1-258)||(63377-63634)
scaffold0054 (283-329)||(63326-63372)
[»] scaffold1056 (1 HSPs)
scaffold1056 (61-329)||(1970-2236)
[»] scaffold0405 (1 HSPs)
scaffold0405 (58-329)||(5848-6119)
[»] scaffold0104 (1 HSPs)
scaffold0104 (64-324)||(43211-43471)
[»] scaffold2165 (1 HSPs)
scaffold2165 (22-296)||(623-897)
[»] scaffold1845 (1 HSPs)
scaffold1845 (115-335)||(1085-1305)
[»] scaffold0585 (1 HSPs)
scaffold0585 (201-319)||(657-775)
[»] scaffold0009 (2 HSPs)
scaffold0009 (9-335)||(251816-252142)
scaffold0009 (141-287)||(229681-229827)
[»] scaffold0068 (1 HSPs)
scaffold0068 (100-335)||(66889-67124)
[»] scaffold0708 (1 HSPs)
scaffold0708 (5-279)||(4982-5256)
[»] scaffold0100 (1 HSPs)
scaffold0100 (148-330)||(16395-16577)
[»] scaffold0077 (1 HSPs)
scaffold0077 (148-326)||(57404-57582)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-166)||(12916-13081)
[»] scaffold0190 (1 HSPs)
scaffold0190 (5-329)||(30113-30437)
[»] scaffold0443 (1 HSPs)
scaffold0443 (49-176)||(12034-12161)
[»] scaffold0270 (2 HSPs)
scaffold0270 (148-326)||(7209-7387)
scaffold0270 (148-326)||(14339-14517)
[»] scaffold0130 (2 HSPs)
scaffold0130 (64-330)||(3678-3944)
scaffold0130 (141-199)||(7696-7754)
[»] scaffold0088 (2 HSPs)
scaffold0088 (1-209)||(30123-30331)
scaffold0088 (247-335)||(30345-30433)
[»] scaffold0079 (1 HSPs)
scaffold0079 (34-294)||(36720-36980)
[»] scaffold0040 (1 HSPs)
scaffold0040 (148-330)||(18181-18363)
[»] scaffold0148 (1 HSPs)
scaffold0148 (139-330)||(2326-2517)
[»] scaffold0042 (2 HSPs)
scaffold0042 (139-329)||(26679-26869)
scaffold0042 (151-203)||(36733-36785)
[»] scaffold0457 (1 HSPs)
scaffold0457 (247-335)||(13835-13923)
[»] scaffold0181 (1 HSPs)
scaffold0181 (34-182)||(28862-29010)
[»] scaffold0113 (1 HSPs)
scaffold0113 (259-335)||(17686-17762)
[»] scaffold0609 (2 HSPs)
scaffold0609 (22-240)||(1149-1367)
scaffold0609 (163-326)||(7908-8071)
[»] scaffold1274 (1 HSPs)
scaffold1274 (214-287)||(20-93)
[»] scaffold0080 (3 HSPs)
scaffold0080 (151-203)||(32218-32270)
scaffold0080 (141-293)||(10062-10214)
scaffold0080 (141-293)||(12717-12869)
[»] scaffold1600 (1 HSPs)
scaffold1600 (214-329)||(468-583)
[»] scaffold0447 (1 HSPs)
scaffold0447 (148-287)||(1693-1832)
[»] scaffold0431 (1 HSPs)
scaffold0431 (250-293)||(10803-10846)
[»] scaffold0383 (1 HSPs)
scaffold0383 (148-287)||(4557-4696)
[»] scaffold0165 (2 HSPs)
scaffold0165 (3-134)||(12151-12282)
scaffold0165 (190-289)||(12322-12421)
[»] scaffold0075 (2 HSPs)
scaffold0075 (148-287)||(48066-48205)
scaffold0075 (148-287)||(55300-55439)
[»] scaffold0018 (2 HSPs)
scaffold0018 (148-287)||(23127-23266)
scaffold0018 (139-275)||(9192-9328)
[»] scaffold0006 (1 HSPs)
scaffold0006 (148-287)||(104562-104701)
[»] scaffold0012 (1 HSPs)
scaffold0012 (148-326)||(216210-216388)
[»] scaffold0044 (2 HSPs)
scaffold0044 (141-294)||(17489-17642)
scaffold0044 (250-293)||(3859-3902)
[»] scaffold0819 (1 HSPs)
scaffold0819 (22-202)||(324-504)
[»] scaffold0333 (1 HSPs)
scaffold0333 (97-285)||(18935-19123)
[»] scaffold0289 (1 HSPs)
scaffold0289 (141-336)||(117-312)
[»] scaffold0285 (1 HSPs)
scaffold0285 (141-293)||(5327-5479)
[»] scaffold0273 (1 HSPs)
scaffold0273 (151-203)||(379-431)
[»] scaffold0546 (1 HSPs)
scaffold0546 (40-203)||(107-270)
[»] scaffold0109 (1 HSPs)
scaffold0109 (40-203)||(13037-13200)
[»] scaffold0081 (2 HSPs)
scaffold0081 (152-203)||(21944-21995)
scaffold0081 (152-203)||(37368-37419)
[»] scaffold0028 (3 HSPs)
scaffold0028 (254-293)||(11891-11930)
scaffold0028 (254-293)||(21419-21458)
scaffold0028 (250-290)||(55439-55479)
[»] scaffold1881 (1 HSPs)
scaffold1881 (141-203)||(393-455)
[»] scaffold0507 (1 HSPs)
scaffold0507 (212-326)||(11428-11542)
[»] scaffold0501 (1 HSPs)
scaffold0501 (151-281)||(263-393)
[»] scaffold0451 (1 HSPs)
scaffold0451 (141-203)||(13945-14007)
[»] scaffold0055 (1 HSPs)
scaffold0055 (247-289)||(22679-22721)
[»] scaffold0052 (1 HSPs)
scaffold0052 (247-289)||(7668-7710)
[»] scaffold1220 (1 HSPs)
scaffold1220 (77-294)||(1-218)
[»] scaffold0993 (1 HSPs)
scaffold0993 (148-281)||(1318-1451)
[»] scaffold0331 (1 HSPs)
scaffold0331 (214-287)||(14808-14881)
[»] scaffold0293 (1 HSPs)
scaffold0293 (148-285)||(15746-15883)
[»] scaffold0177 (2 HSPs)
scaffold0177 (141-294)||(14863-15016)
scaffold0177 (141-203)||(11269-11331)
[»] scaffold0605 (1 HSPs)
scaffold0605 (77-161)||(1545-1629)
[»] scaffold0297 (1 HSPs)
scaffold0297 (151-287)||(7486-7622)
[»] scaffold1423 (1 HSPs)
scaffold1423 (148-203)||(291-346)
[»] scaffold0621 (2 HSPs)
scaffold0621 (148-287)||(353-492)
scaffold0621 (148-287)||(4770-4909)
[»] scaffold0611 (1 HSPs)
scaffold0611 (148-203)||(9356-9411)
[»] scaffold0282 (1 HSPs)
scaffold0282 (214-293)||(13297-13376)
[»] scaffold0207 (1 HSPs)
scaffold0207 (148-287)||(4384-4523)
[»] scaffold0120 (1 HSPs)
scaffold0120 (148-203)||(14420-14475)
[»] scaffold0412 (1 HSPs)
scaffold0412 (77-203)||(15492-15618)
[»] scaffold0180 (1 HSPs)
scaffold0180 (148-206)||(30923-30981)
[»] scaffold0122 (1 HSPs)
scaffold0122 (187-281)||(40342-40436)
[»] scaffold0679 (1 HSPs)
scaffold0679 (301-330)||(821-850)
[»] scaffold0278 (1 HSPs)
scaffold0278 (190-287)||(3929-4026)
[»] scaffold0259 (1 HSPs)
scaffold0259 (256-293)||(8699-8736)
[»] scaffold0198 (1 HSPs)
scaffold0198 (250-291)||(30725-30766)
[»] scaffold0098 (1 HSPs)
scaffold0098 (301-330)||(25949-25978)
[»] scaffold0357 (1 HSPs)
scaffold0357 (242-286)||(17807-17851)
[»] scaffold0342 (1 HSPs)
scaffold0342 (214-326)||(14055-14167)
[»] scaffold0319 (1 HSPs)
scaffold0319 (250-294)||(6938-6982)
[»] scaffold0305 (1 HSPs)
scaffold0305 (79-203)||(3131-3255)


Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 16831868 - 16831533
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |||||    
T  16831868 ctaaccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcagtccgctaacacgtgac 16831769  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16831768 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 16831669  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  16831668 atctctcctattcggcctcctctcatcattaagtctctgcttacccttatcagcaggggcactatacggcttaggatgactctgctgtcccttacctctt 16831569  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  16831568 cgctcactcatcaccttataatgagctttggtgtcc 16831533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 16384712 - 16384377
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| | |||||||||||||||||| || || || || ||||||||||||||||||||||||||||| |||| |||||    
T  16384712 ctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcattacaattatagcatacaacatcaccacgcttgcaatcagccaacatgtgac 16384613  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16384612 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggactttctcgccacacttaaaacaaactatctcagcaggagc 16384513  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  16384512 atctctcctattcggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtatggcttaggacgactctgttgtcccttacctctt 16384413  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  16384412 cgctcactcatcaccttataatgagctttgctgtcc 16384377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 13944813 - 13945148
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| | |||||| ||||||||||| || || || || |||||||||||||| ||||||||||| |||| || |||||    
T  13944813 ctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgac 13944912  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  13944913 ccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagc 13945012  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||  |||||||| ||||| ||||||||| | || |||||||||||||||    
T  13945013 atccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctctt 13945112  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  13945113 cgctcactcatcaccttataatgagctttggtgtcc 13945148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 8744730 - 8744395
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||| ||||| | |||||| ||||||||||| || || || || |||||||||||||| ||||||||||| |||| || |||||    
T  8744730 ctaaccttcttcggttgtgtgcactgagtactgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgac 8744631  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  8744630 ccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagc 8744531  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||  |||||||| ||||| ||||||||| | || |||||||||||||||    
T  8744530 atccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctctt 8744431  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||| ||||||||||||||| |||||    
T  8744430 cgctcactcatcactttataatgagctttggtgtcc 8744395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 31941692 - 31942020
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| | || |||| |||||||||||||||||| || ||||| || ||||| |||||||||||||||||||| |||||||    ||| |    
T  31941692 ctaaccttcttcggctgcgtacactatgaactgatatggccctcctcattgcaattataacaaacaacatcaccacgcttgcagtcagctagagtgtgtc 31941791  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  31941792 ccttctgaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagc 31941891  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    || |||| |||| ||||||||||||||||| |   ||||| | || ||||||||||| ||||| |||||||| |||||||| |||| ||| || |  |||    
T  31941892 atttctcctattgggcctcctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctatcctttgctcctt 31941991  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || ||||||||||||||||||||||||||    
T  31941992 cgatcactcatcaccttataatgagcttt 31942020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 31692525 - 31692197
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| | || ||||||||||||||||||||||| || |||||||| ||||| ||||||||||||| |||||| |||||||    ||| |    
T  31692525 ctaaccttcttcggctgcgtacactgtgaactgatatggccctcctcattgcagttataacaaacaacatcaccactcttgcagtcagctagagtgtgtc 31692426  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||  ||||||| |||||||||| |||    
T  31692425 ccttctaaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttctcaccacacttgtaacaaacgatctcagcagaagc 31692326  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    || |||| |||| ||||||||||||||||| |   ||||| | || ||||||||||| ||||| |||||||| |||||||| |||||||| || |  |||    
T  31692325 atttctcctattgggcctcctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctcctt 31692226  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || ||||||||||||||||||||||||||    
T  31692225 cgatcactcatcaccttataatgagcttt 31692197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 17189163 - 17189491
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||| |||||| ||| | || |||||||||||||| |||||||| || |  || || ||||| ||||||||||| | |||||| | ||| |||  ||| |    
T  17189163 ctaatcttctttggctgagtacactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcaccccacttgcagttagccaacgtgtgtc 17189262  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||    
T  17189263 ctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggagc 17189362  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || | ||||||||||||||||| ||||||| | ||||||| |||||| |||||||||||||| |||||||| ||||| ||||| |||||     
T  17189363 atctctcctcttggacctcctctcatcattaaatctctgctttcccttgttagcaggagcactgtacggcttcggacgactctgctggcccttgcctctg 17189462  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  17189463 cggtcactcatcaccttgtaatgagcttt 17189491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 24190093 - 24190420
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||| |||||| ||| | || |||||||||||||| |||||||| || |  || || ||||| ||||||||||| | |||||| | ||| |||  ||| |    
T  24190093 ctaatcttctttggctgagtacactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcaccccacttgcagttagccaacgtgtgtc 24190192  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||    
T  24190193 ctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggagc 24190292  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | ||   ||||||||||||||| | ||||||| | |||||||||||||| |||||||||||||| |||||||| |||||  |||| |||||     
T  24190293 atctctcctcttgtacctcctctcatcattcaatctctgctttcccttgtcagcaggagcactgtacggcttcggacgactctgctg-gccttgcctctg 24190391  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || ||| |||||||||| |||||||||||    
T  24190392 cggtcagtcatcaccttgtaatgagcttt 24190420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 12357867 - 12357539
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||| ||||| ||||||||||| || || || |||||||| || || ||||| || || ||||| |||||||||||   ||| |    
T  12357867 ctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtc 12357768  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||| ||   ||| || ||||||||||||||||| |||||||||||  | ||||| |||||||||||||     
T  12357767 ctttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagt 12357668  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| || |||| | | |||||||||||||| ||||| || || ||||||||||| || ||||||||||||||     
T  12357667 atctctcctcttgggcctcctctcatcattcagcctctactttcccttgtcagcaggagcactatatggtttaggacgactctgatgtcccttacctctg 12357568  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  12357567 cgctcactcatcaccttgtaatgagcttt 12357539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 16825619 - 16825291
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || |||||  |||||||||| || || || ||| ||||||| || ||||  || |||||||| |||||||||||   ||| |    
T  16825619 ctaaccttcttaggctgcgtacactgcaaactgatatgaccttcctcattgaagttgtagcaaacaatgtccccacgcttacaatcagctaaagtgtgtc 16825520  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | || | |||||||||||||||||||||||||||   |  |||||| ||||||||||||||||| || |||||||| |||||||| || |||| ||||||    
T  16825519 cttttttaccacacctgaagcacttcttctcatcacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagc 16825420  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||||| || |||||||||||||| || | ||||| | |||||||||||| ||||||||| |||||||| ||||||||  |||||||||| |||||     
T  16825419 atctctcatcttgggcctcctctcatctttcaatctctacttacccttgtcaggaggggcactatacggcttcggacgactcagctgtcccttgcctctg 16825320  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  16825319 cgctcactcatcaccttgtaatgagcttt 16825291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 10408778 - 10409091
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  10408778 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 10408877  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||| ||  ||||||| |||||||| |||||||||||| | || ||||||||    
T  10408878 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacatttgtaacaaacaatctcagctggagcatctctcctcttgggcctcct 10408977  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||  |||||||||||||||| |||||||| |||||||||||||| || ||||||||||| || | ||||||||| | ||| |||    
T  10408978 atcatcacccatcttctgtttacccttgtcagcaggagcactgtaaggcttaggacgactctggtgtcccttacccctcctctcactcattatcttgtaa 10409077  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  10409078 tgagctttggtgtc 10409091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 47126754 - 47127067
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  47126754 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 47126853  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  47126854 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 47126953  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |  |||||| | || ||||||||||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | |||||||    
T  47126954 atcatcacccatcctctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataa 47127053  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  47127054 tgagctttggtgtc 47127067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 66 - 330
Target Start/End: Complemental strand, 14290807 - 14290543
Alignment:
Q  66 aacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttc 165  Q
    |||||| |||||||| |||||||||||   ||| || ||||| |||||||| |||||||||||||||||      ||| || ||||||||||||||||||    
T  14290807 aacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcaatcacacacattactcttgtggcctttc 14290708  T
Q  166 tcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgt 265  Q
    || |||||||| || ||||  ||||||| ||||||||||||| | || ||||||||||||||||| || |||||  |||| ||||||||||| ||||| |    
T  14290707 tcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactat 14290608  T
Q  266 acggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
    |||| || |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||    
T  14290607 acggtttcggacgactctgctgtcccttacctctgcgctcactcatcactttataatgagctttg 14290543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 49 - 329
Target Start/End: Complemental strand, 18131639 - 18131359
Alignment:
Q  49 ttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgt 148  Q
    |||||||| || || || ||||| |||||||| |||| ||||||   ||| || |||||||||||||||||||||||||||||||| ||   |||||| |    
T  18131639 ttgcagttatagcacactacatccccacgcttacaattagctaatgcgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacat 18131540  T
Q  149 tactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccctt 248  Q
    ||||||||||||||||||||||||||||  | ||| | |||||| |||||||||||||| | || ||||||||||||| ||| ||||||||  | || ||    
T  18131539 tactcttgtggcctttctcgccacacttgtagcaatcaatctcaacaggagcatctctcctcttgggcctcctctcattattcagtctctgttttccttt 18131440  T
Q  249 gtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    ||||||||| ||||| || || ||||||||||| |||||||| |||||||| || ||||||||||| || |||||||||||    
T  18131439 gtcagcaggagcactatatggtttaggacgactctgctgtcctttacctctccgttcactcatcactttgtaatgagcttt 18131359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 35982970 - 35983299
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || || || ||||| ||||| || || || || |||||||| || |||| ||| ||||||||||||||||| ||   ||| |    
T  35982970 ctaaccttcttaggctgcgtacaatgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtc 35983069  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    | ||||| ||||| ||||| |||||||||||||| | ||| ||| || |||||||||||||||||||| |||||||| || ||||  ||| ||| |||||    
T  35983070 ctttctgtccacatctgaaacacttcttctcatc-tcggtcacacacattactcttgtggcctttctcaccacacttgaagcaaataatcacagtaggag 35983168  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    |||||||| | || ||||||||||||||||| || |||||  |||| ||||||||||| ||||| ||||| || |||| ||| |||||||||||||||||    
T  35983169 catctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacaactctgctgtcccttacctct 35983268  T
Q  300 tcgctcactcatcaccttataatgagctttg 330  Q
     | |||||||||||| |||||||||||||||    
T  35983269 gcactcactcatcactttataatgagctttg 35983299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 28757129 - 28757442
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| ||||| || ||| | ||||| |||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  28757129 cactgtgaactaatatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 28757228  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  28757229 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 28757328  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | ||| |||    
T  28757329 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatcttgtaa 28757428  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  28757429 tgagctttggtgtc 28757442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 329
Target Start/End: Complemental strand, 11958517 - 11958193
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||||||| | || |||| |||||||||||| |  ||||||||||||||||| || ||||  ||  ||||||| || |||||||     || || ||    
T  11958517 ccttcttcggctgagtacactatgaactgatatgactttcttcgttgcagttgtagcagacaatgtcctcacgcttacattcagctagtgtatgtccttt 11958418  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatct 204  Q
    ||||||||||||||| |||||| |||||||  |   |||| | || || ||||||||||| || ||||||||| ||||||| || |||||||||||||||    
T  11958417 ctgaccacacctgaaacacttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttataacaaacaatttcagcaggagcatct 11958318  T
Q  205 ctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgct 304  Q
    ||| | ||  ||||||| |||||||| | ||||||  | || ||||||||||| |||||||| || ||||||||| | ||||||||||||||||| | ||    
T  11958317 ctcctcttaagcctcctatcatcattcattctctgtttccctttgtcagcaggagcactgtaaggtttaggacgattctgctgtcccttacctctcctct 11958218  T
Q  305 cactcatcaccttataatgagcttt 329  Q
    ||||||||||||| |||||| ||||    
T  11958217 cactcatcaccttgtaatgaacttt 11958193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 12181133 - 12181461
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  | || ||||  ||||||||||| || || | |||||| || ||||| ||||  || ||| |||| ||||||||||    ||| |    
T  12181133 ctaaccttcttcggttgcgtacactacgaactgatatgaccttccttgttgcaattataacaaacaatgtccccaagcttacaatcagctagtgtgtgtc 12181232  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||| ||||||| ||||||||||||||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||  || |||| ||||||    
T  12181233 ctttccgaccacaactgaagcacttcttctcatctctatcacagactttactcttgtggcctttttcaccacacttgaagcaaaaaatgtcagtaggagc 12181332  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || | ||||||||||||||| |  |||| | |||||||||||||||| ||||| ||||||||  ||||||| || |||||||| ||||||    
T  12181333 atctctcctcttggtcctcctctcatcatttaacctctacttacccttgtcagcaggagcactatacggcttcagacgactctgttgtcccttgcctctt 12181432  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  12181433 cgttcactcatcaccttgtaatgagcttt 12181461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 16327049 - 16326713
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||||||   || ||||| ||||||||||| |||||| | ||||||||||| || ||||  || |||||||| || ||||||||   ||| |    
T  16327049 ctaaccttcttcggcttagtacactgcgaactgatatgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgtc 16326950  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaacta-tctcagcaggag 199  Q
    ||||||||||||||||||| || ||| |||||||  |   |||||| || |||||||||||||| || ||||||||| ||||||| | ||||||||||||    
T  16326949 ccttctgaccacacctgaaacatttcctctcatctctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaagtctcagcaggag 16326850  T
Q  200 ca-tctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctc 298  Q
    || |||||| | || || ||||| |||||||| |   | ||| | || ||||||||||| |||||||  |||||||||||||| ||||||||||| || |    
T  16326849 cagtctctcctcttgggtctcctatcatcattcaccttttgctttcctttgtcagcaggagcactgtcaggcttaggacgactctgctgtcccttgcccc 16326750  T
Q  299 ttcgctcactcatcaccttataatgagctttgatgtc 335  Q
    | | ||||||||| | ||| |||||||||||| ||||    
T  16326749 tcctctcactcattatcttgtaatgagctttggtgtc 16326713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 55 - 329
Target Start/End: Complemental strand, 12857782 - 12857508
Alignment:
Q  55 ttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactct 154  Q
    ||||| || |||| ||||| ||||||||| |||||||  | ||| || ||||  ||||| | ||| ||||||||||||||   |  ||| || ||||||     
T  12857782 ttgtagcaaacaatatcacgacgcttgcactcagctattatgtgtcctttctttccacatcggaaacacttcttctcatcacagtcacatacattactca 12857683  T
Q  155 tgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagc 254  Q
    ||||||| || || |||||||| ||||| || ||||||| ||||||||||||| | || ||||||||||||||||| ||||  ||  |||| ||||||||    
T  12857682 tgtggcccttttcaccacacttgaaacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcagtccttgtttacctttgtcagc 12857583  T
Q  255 aggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    ||| ||||| ||||| || |||||||| | ||||||||| ||||| |||||||||||||||||||||||||||||    
T  12857582 aggagcactatacggttttggacgactctactgtcccttgcctctacgctcactcatcaccttataatgagcttt 12857508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 17494436 - 17494768
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  | || ||||| ||||| ||||| || || ||||||||||| || || ||||  || |||| ||| || |||||||    ||| |    
T  17494436 ctaaccttcttcggttgagtacactgcgaactaatatgaccttcctcgttgcagttatagcaaacaatgtctccacacttacagtcagctagtgtgtgtc 17494535  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||| |||||||||||||||  |   |||||| ||||||||||||||||| || ||||| || || ||||| ||||||| | ||||    
T  17494536 ctttctgaccacacctga-gcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacatttgaagcaaacaatctcagtatgagc 17494634  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctaccctt----gtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    ||||||| | || ||||||||||||||||| |  |||||| |||||||    | ||||||| ||||| || ||||| | ||||||||| ||||||||  |    
T  17494635 atctctcctcttgggcctcctctcatcatttaacctctgcttacccttctcagccagcaggagcactatatggcttcgaacgactttgttgtcccttggc 17494734  T
Q  297 tcttcgctcactcatcaccttataatgagctttg 330  Q
    ||| ||||||||||||||||| ||||||||||||    
T  17494735 tctgcgctcactcatcaccttgtaatgagctttg 17494768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 281
Target Start/End: Complemental strand, 13317867 - 13317629
Alignment:
Q  43 tcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtac 142  Q
    ||||| || ||||| ||||| || ||||| |||||||||||||| ||||| |  ||||| || |||||||| ||||| |||||||||||||| ||||| |    
T  13317867 tcttcattacagttataacaaaccacatccccacgcttgcaatccgctaaaacatgacctttttgaccacatctgaaacacttcttctcatctttggtgc 13317768  T
Q  143 aaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcct 242  Q
    |||| ||||| |||||||||||  | ||||||||  ||||||| |  ||| ||||||||||||||    | ||||||||||||||||| | | | ||  |    
T  13317767 aaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggcctcctctcatcatttaatatttgttt 13317668  T
Q  243 acccttgtcagcaggggcactgtacggcttaggacgact 281  Q
     || ||||||||||| |||||||| ||||| || |||||    
T  13317667 tcctttgtcagcaggagcactgtagggcttcgggcgact 13317629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 11949217 - 11949107
Alignment:
Q  49 ttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgt 148  Q
    |||||||| || || |||||||| || ||||| ||||||||||| | ||| || ||||||||||| |||||||||||||||||||| || |||||||| |    
T  11949217 ttgcagttatagcaaacaacatctccccgcttacaatcagctaatatgtgtcctttctgaccacatctgaagcacttcttctcatctttagtacaaacat 11949118  T
Q  149 tactcttgtgg 159  Q
    |||||||||||    
T  11949117 tactcttgtgg 11949107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 330
Target Start/End: Original strand, 15230531 - 15230721
Alignment:
Q  140 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctg 239  Q
    ||||||| |||||||||||||| || || ||||||||  | ||||| |||||||||||| ||||| |  | || ||||||||||||||||| | ||| ||    
T  15230531 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttg 15230630  T
Q  240 cctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccct--tacctcttcgctcactcatcaccttataatgagctttg 330  Q
    | | || ||||||||||| ||||| || ||||||||||||| ||| || || |  | ||||||  ||||||||| ||||||||||||||||||    
T  15230631 cttccctttgtcagcaggagcactatagggcttaggacgaccttgttggcctttgttcctctt--ctcactcataaccttataatgagctttg 15230721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 330
Target Start/End: Original strand, 15236399 - 15236589
Alignment:
Q  140 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctg 239  Q
    ||||||| |||||||||||||| || || ||||||||  | ||||| |||||||||||| ||||| |  | || ||||||||||||||||| | ||| ||    
T  15236399 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttg 15236498  T
Q  240 cctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccct--tacctcttcgctcactcatcaccttataatgagctttg 330  Q
    | | || ||||||||||| ||||| || ||||||||||||| ||| || || |  | ||||||  ||||||||| ||||||||||||||||||    
T  15236499 cttccctttgtcagcaggagcactatagggcttaggacgaccttgttggcctttgttcctctt--ctcactcataaccttataatgagctttg 15236589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 15008900 - 15008695
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||| ||||| | |||||| ||||| |  || ||| |||| |||| ||||||||||||||| ||||||| |   || |||||||  ||||| | |||||    
T  15008900 cactgcgaactaagatggccttcttcatcacatttgaaacaaacaatatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagc 15008801  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    |||||| |||| | |||   ||||| ||||||||||||||| |||| ||||||||  | ||||| |||||||||||| |||||||| | || || |||||    
T  15008800 acttctcctcaccattg---caaacattactcttgtggcctctctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcct 15008704  T
Q  222 ctcatcatt 230  Q
    |||||||||    
T  15008703 ctcatcatt 15008695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 203
Target Start/End: Original strand, 12501751 - 12501914
Alignment:
Q  40 ccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttgg 139  Q
    |||||||| ||||| ||| |||| |||| ||||||| ||||||||||||||||   |||||||||||  ||||||| ||| || |||||  | ||||  |    
T  12501751 ccctcttccttgcaattgaaacacacaatatcaccatgcttgcaatcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctcctcag 12501850  T
Q  140 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
     |||||| || ||||||||||||||||||||||| || |||||    |||||||||||| ||||    
T  12501851 gacaaacattgctcttgtggcctttctcgccacaattgaaacaggtaatctcagcaggaacatc 12501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 3688960 - 3689011
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  3688960 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 3689011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 10008625 - 10008671
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  10008625 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 10008671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 10909235 - 10909281
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  10909235 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 10909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 19727679 - 19727825
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||| |||||||||| ||||||||||| |||||  || | ||||| |||||||||  | ||||| || | || ||||||||||||||||| | ||| ||     
T  19727679 acaagcgttactcttatggcctttctcaccacaagtatagcaaacaatctcagcaacaacatctttctttttaggcctcctctcatcattcaatctttgt 19727778  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
     | ||||| |||||||| |||||||| ||||| ||| ||||||||||    
T  19727779 ttgcccttatcagcaggagcactgtaaggctttggaagactttgctg 19727825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 203
Target Start/End: Original strand, 11861165 - 11861334
Alignment:
Q  34 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcat 133  Q
    ||||| |||||||| ||| | ||| | || |||| ||||| | ||||||||||||||||    |||||||||| |||||||| ||| || |||||| | |    
T  11861165 atatgaccctcttccttggaattgaagcacacaatatcactatgcttgcaatcagctaaagtatgacccttcttaccacaccagaaacatttcttcacct 11861264  T
Q  134 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||  | |||||| || ||||||||||||||||| ||||| || ||| | || ||||| |||||||||||    
T  11861265 cctctggacaaacattgctcttgtggcctttctcaccacaattgaaatagacaatctccgcaggagcatc 11861334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 5422043 - 5421992
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  5422043 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 5421992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 329
Target Start/End: Complemental strand, 12508692 - 12508577
Alignment:
Q  214 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatca 313  Q
    |||||| |||||||||| |  ||||||  |||||| ||||| || |||||||| ||||| |||||||||||||| | ||||||| | | |||||||||      
T  12508692 ggcctcttctcatcattcaccctctgctcacccttatcagccggagcactgtaaggctttggacgactttgctgactcttacctttcctctcactcatag 12508593  T
Q  314 ccttataatgagcttt 329  Q
    |||| |||||||||||    
T  12508592 ccttgtaatgagcttt 12508577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 20059159 - 20059116
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  20059159 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 20059116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 2037111 - 2037025
Alignment:
Q  142 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 228  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  2037111 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2037025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 2040852 - 2040766
Alignment:
Q  142 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 228  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  2040852 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2040766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 6597077 - 6597123
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  6597077 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 6597123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 6603757 - 6603803
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  6603757 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 6603803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 12889731 - 12889777
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  12889731 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 12889777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 13255712 - 13255758
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  13255712 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 13255758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 14039676 - 14039762
Alignment:
Q  142 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 228  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  14039676 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 14039762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 15586500 - 15586454
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  15586500 ttgtcagcgggggcactgtacggcttaggacgactttgttgtccctt 15586454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 16638795 - 16638841
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16638795 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16638841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 16753809 - 16753763
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16753809 ttgtcagcgggggcactgtacggcttaggacgactatgctgtccctt 16753763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 23079228 - 23079166
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| || ||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||    
T  23079228 acaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcaggagcatc 23079166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 43165697 - 43165743
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  43165697 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 43165743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 48428469 - 48428515
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  48428469 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 48428515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 23415001 - 23414861
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||||||||||||| | || ||||| || ||||| |||||||||||  || | || |||| ||| |||||    | ||||||     
T  23415001 acaaacattactcttgtggcctttctcgccatagttgaaacagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgt 23414902  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgact 281  Q
     | ||||| |||||||||||||| || |||||||| |||||    
T  23414901 ttgcccttatcagcaggggcactataaggcttagggcgact 23414861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 15345358 - 15345307
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| ||||||||||||||||||||| |||| |||||||||||    
T  15345358 tacctttgtcagcgggggcactgtacggcttaggaggactctgctgtccctt 15345307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 15399623 - 15399580
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  15399623 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 15399580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 15713161 - 15713118
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  15713161 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 15713118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 15065990 - 15066052
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||| |||||||||||||    
T  15065990 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatcgcagcaggagcatc 15066052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 26790512 - 26790475
Alignment:
Q  256 ggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||| |||||||||||    
T  26790512 ggggcactgtacggcttaggacgactctgctgtccctt 26790475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 53382118 - 53382081
Alignment:
Q  256 ggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||| |||||||||||    
T  53382118 ggggcactgtacggcttaggacgactctgctgtccctt 53382081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 24186222 - 24186258
Alignment:
Q  257 gggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24186222 gggcactgtacggcttaggacgactctgctgtccctt 24186258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 12843307 - 12843168
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| || |  | |||| |||||||||| | | ||||||  | ||||    
T  12843307 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttcttcctaggccgcctctcatcaatcattctctgtttgccct 12843208  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| ||||| ||  |||| |||||||| |||||    
T  12843207 tatcagcaggagcactataaagctttggacgactctgctg 12843168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 15359077 - 15359120
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||    
T  15359077 tcagcgggggcactgtacggcttagggcgactctgctgtccctt 15359120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 17497617 - 17497672
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||||||||||||||||| |||||  ||||||| || ||||| |||||||||||    
T  17497617 ttactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 17497672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 10417327 - 10417225
Alignment:
Q  59 aacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtg 158  Q
    |||| |||| ||| |||||||||||||| || ||||  ||||| |||||||| || ||||| || ||||||||||| |  || ||| | |||||||||||    
T  10417327 aacaaacaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtg 10417228  T
Q  159 gcc 161  Q
    |||    
T  10417227 gcc 10417225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 16695083 - 16695145
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| ||||||||| |||||||||||||||| || ||||||   |||||||| ||||||||    
T  16695083 acaaacattactcttgcggcctttctcgccacaattgaaacaagtaatctcagctggagcatc 16695145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Complemental strand, 2245712 - 2245683
Alignment:
Q  301 cgctcactcatcaccttataatgagctttg 330  Q
    ||||||||||||||||||||||||||||||    
T  2245712 cgctcactcatcaccttataatgagctttg 2245683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 14873786 - 14873734
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||| ||||||||||| ||||| |||||||| || ||||||||| |||||||    
T  14873786 ctcttatggcctttctcaccacaattaaaacagacaatctcagcatgagcatc 14873734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 15262556 - 15262692
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| | ||||||||| |||||  || | || || |||||| ||||||||||| || |  |  |||||||||||||||| | ||| ||  ||||||    
T  15262556 ttactcttatagcctttctcaccacaagtatagcagacaatctcaacaggagcatctttccttctacgcctcctctcatcattcattctttgtttaccct 15262655  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttg 284  Q
    | |||||||| ||  |||| ||||| |||||||||||    
T  15262656 tatcagcaggagcgttgtaaggctttggacgactttg 15262692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 268; Significance: 1e-149; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 5 - 336
Target Start/End: Original strand, 22054093 - 22054424
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||    
T  22054093 ccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcaatccgctaaaaggtgaccctt 22054192  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatct 204  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22054193 ctgaccacatctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcagaagcatct 22054292  T
Q  205 ctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgct 304  Q
    ||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  22054293 ctcctattcggcctcctctcatcattaagtctctgcttacccttatcagcaggggcactgtacggcttaggacgactctgccgtcccttacctcttcgct 22054392  T
Q  305 cactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||||||||||||||| |||||    
T  22054393 cactcatcaccttataatgagctttggtgtcc 22054424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 22027835 - 22027507
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||| ||| |||| || || ||||| || || | ||| |||||||||||   |||||    
T  22027835 ctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgtagttatagcaaacaacgtctcccctcttacaatcagctaatgtgtgac 22027736  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  22027735 ccttctgaccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttatcgccacacttgtaacaaactatctcagcaggagc 22027636  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||| ||||||||||||||||| | ||| ||| | |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||    
T  22027635 atctctcctattgggcctcctctcatcattcaatctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtcccttaccactt 22027536  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    |||||||||||||||||||||||| ||||    
T  22027535 cgctcactcatcaccttataatgatcttt 22027507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 5 - 335
Target Start/End: Complemental strand, 31414083 - 31413753
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||||| | | || ||||||||||||||||| || ||||||||||||||||| || ||||  || |||||||| || |||||||    ||| || ||    
T  31414083 ccttcttcgactgagtacactgtgaactgatatgaccttcttcgttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtccttt 31413984  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatct 204  Q
    |||||||||||| || |||||| |||||||  |   |||| | || ||||| |||||||| || |||||||| |||||||| || ||| |||||||||||    
T  31413983 ctgaccacacctaaaacacttcctctcatctctaccacaagcattgctcttatggcctttttcaccacacttgaaacaaacaatttcaacaggagcatct 31413884  T
Q  205 ctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgct 304  Q
    ||| | || ||||||||||||||||| | ||||||| | ||||||||||||||||| ||||| || ||||||||||| |||||||||||||| |||||||    
T  31413883 ctcctcttgggcctcctctcatcattcattctctgctttcccttgtcagcaggggcgctgtaaggtttaggacgactctgctgtcccttaccccttcgct 31413784  T
Q  305 cactcatcaccttataatgagctttgatgtc 335  Q
    |||||||||  || |||||||||||| ||||    
T  31413783 cactcatcattttgtaatgagctttggtgtc 31413753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 16268758 - 16268445
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| |||||| | ||||| ||||| || |||| ||| ||||||||||| |||||||     |||||||||||||||||||||||||    
T  16268758 cactgtgaactgatatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattcagctaggctatgacccttctgaccacacctgaagc 16268659  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| ||||||| ||   |||||| |||||||||||||||||||| ||||||||  ||||||| ||||||| ||||||||||||| | || ||||||||    
T  16268658 acttcctctcatctttaccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcttcttaggcctcct 16268559  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     |||||| | |   ||||| | || ||||||||| | |||||||| |||||||||||| | || ||||||||||| || | ||||||||| |  || |||    
T  16268558 gtcatcactcatcttctgctttcctttgtcagcaagagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatattgtaa 16268459  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  16268458 tgagctttggtgtc 16268445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 28984158 - 28984471
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  28984158 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 28984257  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  ||||||| |||||| | |||||||||||| | || ||||||||    
T  28984258 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcaactggagcatctctcctcttgggcctcct 28984357  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |  |||||| | |||||||| ||||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | ||| |||    
T  28984358 atcatcacccatcctctgctttcccttgtccgcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttgtaa 28984457  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  28984458 tgagctttggtgtc 28984471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 22 - 330
Target Start/End: Original strand, 19985427 - 19985735
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    |||||||| || ||||| |||||||| |  || || || || |||||||| |||| |||||||||||||||   ||| |  ||||| ||||| |||||      
T  19985427 cactgtgagctaatatgcccctcttcatcacaattatagcaaacaacatccccactcttgcaatcagctaatgtgtgtcatttctgtccacatctgaaat 19985526  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    |||||||||||||   |  ||| || ||||||||||||| ||| ||||||||||| |||||||| ||||||| ||||||||||||| | || ||||||||    
T  19985527 acttcttctcatcacggtcacatacattactcttgtggcttttttcgccacacttgaaacaaacaatctcagtaggagcatctctcctcttaggcctcct 19985626  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
    ||||||| | |  |||||  |||||||||| ||||||||||| |||||||| |||||||| |||| |||||| || || ||||||||||||||||| |||    
T  19985627 ctcatcaatcatcctctgtttacccttgtccgcaggggcactatacggcttcggacgactctgctatcccttgccactgcgctcactcatcaccttgtaa 19985726  T
Q  322 tgagctttg 330  Q
    |||||||||    
T  19985727 tgagctttg 19985735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 64 - 329
Target Start/End: Original strand, 22374158 - 22374423
Alignment:
Q  64 acaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctt 163  Q
    |||| ||||||||||||||||||||||||   ||| || ||||  |||||||| || |||||||| |||||   |  ||| || |||||||||||| |||    
T  22374158 acaatatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcatcacggtcacatacattactcttgtggtctt 22374257  T
Q  164 tctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcact 263  Q
    | || |||||||| ||||| || ||||||| ||||| ||||||| |  | ||||||||||| ||||||||||| ||  |||| ||| |||||||||||||    
T  22374258 tttcaccacacttgaaacagacaatctcagtaggagaatctctcctcctaggcctcctctcctcattaagtctttgtttacctttgacagcaggggcact 22374357  T
Q  264 gtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
     ||||| || |||||||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  22374358 atacggtttcggacgactctactgtcccttacctctgcgctcactcatcaccttataatgagcttt 22374423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 67 - 330
Target Start/End: Original strand, 21928720 - 21928983
Alignment:
Q  67 acatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttc 165  Q
    ||||||||||||||||||||| | ||   ||| || ||||| ||||| ||||| |||||||||||||| | ||| ||  || ||||||| |||||| ||     
T  21928720 acatcaccacgcttgcaatcacccaaagtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacttacattactctcgtggcccttt 21928818  T
Q  166 tcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgt 265  Q
    ||||||||||| |||||||  ||||||| ||||||||||||| |  | ||||||||||||||||| || |||||  | || ||||||||||| ||||| |    
T  21928819 tcgccacacttgaaacaaagaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctgttttcctttgtcagcaggagcactat 21928918  T
Q  266 acggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
    |||| ||||||||||| || |||||||||||||| ||||||||||||||||| ||||||||||||    
T  21928919 acggtttaggacgactctgttgtcccttacctctacgctcactcatcaccttgtaatgagctttg 21928983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 329
Target Start/End: Complemental strand, 29300977 - 29300653
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||||||| | || ||||| ||||||||||| || ||||| |||||||| ||  | ||||  || |||||||| || |||||||    ||| ||  |    
T  29300977 ccttcttcggctgagtacactgagaactgatatgaccttcttcattgcagttatagtagacaatgtccccacgcttacattcagctagtgtgtgtcctct 29300878  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatct 204  Q
    |||||||||||| || |||||| | |||||  |   |||| | || |||||||||||| | || ||||||||||||||||| || ||||| ||| |||||    
T  29300877 ctgaccacacctaaaacacttcctttcatctctaccacaagcattgctcttgtggcctctttcaccacacttaaaacaaacaatttcagcgggaacatct 29300778  T
Q  205 ctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgct 304  Q
    | | | || |||||||| |||||||| |   ||||| | || ||||||||||| |||||||| || ||||||||||| |  ||||||||||| || | ||    
T  29300777 cccctcttgggcctcctatcatcattcatcttctgcttccctttgtcagcaggagcactgtaaggtttaggacgactctaatgtcccttacccctcctct 29300678  T
Q  305 cactcatcaccttataatgagcttt 329  Q
    ||||||| ||||| |||||||||||    
T  29300677 cactcattaccttgtaatgagcttt 29300653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 330
Target Start/End: Original strand, 20391454 - 20391641
Alignment:
Q  143 aaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcct 242  Q
    |||| |||||||||||||| ||||| ||||||||  | ||||| ||||||| |||| |||||||  | || || |||||||||||||| | ||| ||  |    
T  20391454 aaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagaaggaacatctctactcttaggtctcctctcatcattcaatctttgttt 20391553  T
Q  243 acccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
     || ||||||||||| |||||||| ||||| ||||||| |||||| || ||    || ||||||||||| ||||||||||||||||||    
T  20391554 ccctttgtcagcaggagcactgtagggcttcggacgaccttgctgacctttgttcctccgctcactcataaccttataatgagctttg 20391641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 306
Target Start/End: Original strand, 22523883 - 22524041
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||| |||||||||||||||||||  || | || || |||||| ||||||||||| || |  | |||| |||||||||||||| ||| ||  | ||||    
T  22523883 ttactcctgtggcctttctcgccacaagtatagcacacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgttttccct 22523982  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctca 306  Q
    | ||||||||||||||||| ||||| |||||||| ||||| || || ||| ||||||||    
T  22523983 tatcagcaggggcactgtaaggctttggacgactctgctgacctttgccttttcgctca 22524041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 19481389 - 19481335
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  19481389 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacc 19481335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 6607024 - 6606795
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| |||| ||||||||||||| ||| || ||||| |  || ||| | || |||| ||| ||||||||||| ||||||| |   || |    
T  6607024 ctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcatcacaattgaagcaaacaatatccccacgcttgcattcagctatcgtatgcc 6606925  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||  ||||| | ||||||||||||||| ||     | ||||| |||||||||||||| ||||| ||||||||  | ||||| ||||||| |||| |    
T  6606924 ccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaac 6606825  T
Q  201 atctctcatattcggcctcctctcatcatt 230  Q
    ||||||  | || || ||||||||||||||    
T  6606824 atctcttctcttaggtctcctctcatcatt 6606795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 293
Target Start/End: Complemental strand, 30310559 - 30310407
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||||||||||||||| || |||||||| || || |||||||||||  || | || |||| ||| |||||    | ||||||     
T  30310559 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccattctctgt 30310460  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
     | ||||| |||||||||||||| || || ||||| ||||| ||||| |||||    
T  30310459 ttgcccttatcagcaggggcactataaggtttagggcgactctgctgaccctt 30310407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 17671339 - 17671288
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  17671339 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 17671288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 19115872 - 19115915
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  19115872 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 19115915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 20015572 - 20015529
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  20015572 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 20015529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 22117478 - 22117441
Alignment:
Q  256 ggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22117478 ggggcactgtacggcttaggacgactttgctgtccctt 22117441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 293
Target Start/End: Original strand, 15536749 - 15536901
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| ||||||||||||||||  |||||||| ||||||||||  ||||| | |||||||||  || | || |||| ||| |||||    | |||||||    
T  15536749 acaaacattactcttgtggccttcttcgccacaattaaaacaaataatctccgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgc 15536848  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
     | ||||| || ||||||||||| || |||||||| ||||| ||||| |||||    
T  15536849 ttgcccttatcggcaggggcactataaggcttagggcgactctgctggccctt 15536901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 21163935 - 21163883
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||| ||||||||||||| |||||||| || |||||||||||||||||    
T  21163935 ctcttgtggtctttctcgccacaattaaaacagacaatctcagcaggagcatc 21163883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 18860049 - 18860092
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  18860049 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 18860092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 21391269 - 21391214
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||||||||||||||||| |||||   ||||||||| |||||||||||||||||    
T  21391269 ttactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatc 21391214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 21780595 - 21780540
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||||||||||||||||| |||||   ||||||||| |||||||||||||||||    
T  21780595 ttactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatc 21780540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 22126268 - 22126225
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  22126268 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 22126225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 294
Target Start/End: Original strand, 32603511 - 32603664
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||||||| | ||||| || |||||||| || || | |||||||||  || | || || | ||| |||||    | |||||||    
T  32603511 acaaacattactcttgtggcctttcccaccacagttgaaacaaacaatttccgaaggagcatccttcttcttaggtcgcctatcatcgaccattctctgc 32603610  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||| ||||||    
T  32603611 ttgcccttatcagcaggggcactataaggcttagggcgactctgctggccctta 32603664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 21671982 - 21672033
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||| |||||||| |||||||| |||||||||||||| ||||| |||||    
T  21671982 tacccttatcagcaggagcactgtaaggcttaggacgactctgctgaccctt 21672033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 299
Target Start/End: Original strand, 3274550 - 3274629
Alignment:
Q  219 cctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    |||||||||||| |  ||||||  |||||| || ||||| |||||||| ||||| |||||||||||||| || ||||||||    
T  3274550 cctctcatcattcaccctctgctcacccttatc-gcaggagcactgtaaggctttggacgactttgctggcctttacctct 3274629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 9902 - 9567
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||    
T  9902 ctaaccttcttcggcagtgtgcactgtgtactgatatggcactcttcgttgcagttataacatacaacatcaccacgcttgcaatccgctaaaaggtgac 9803  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9802 ccttctaaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 9703  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| ||   |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||    
T  9702 atctctcctaacgggcctcctctcatcattaagtctcagcttacccttatcagcaggggcactgtacggcttaggacgactctgttgtcccttacctctt 9603  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  9602 cgctcactcatcaccttataatgagctttggtgtcc 9567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 252; Significance: 1e-140; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 203570 - 203905
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||| | |||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||| ||||| | |||||    
T  203570 ctaaccttcttcgactgtgtgcactgtgtactgatatggccctcttcgttacagttataacatacaacatcaccatccttgcaatccgctaaaaggtgac 203669  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  203670 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcaccaggagc 203769  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| ||   ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  203770 atctctcctaacgggcctcctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacctctt 203869  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  203870 cgctcactcatcaccttataatgagctttggtgtcc 203905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 424746 - 424822
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||  | |||||| ||| || ||| ||||||||    
T  424746 tcagcaggggcattgtacggcttaggacgactatgctgtcccttgcccttccgctcattcaccatcttgtaatgagc 424822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 424518 - 424587
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagcta 91  Q
    |||||||||||||| || |||||||| ||||||||  |||| ||||  ||  ||||||||||||||||||    
T  424518 cactgtgaactgatgtgaccctcttcattgcagttaaaacacacaatgtcctcacgcttgcaatcagcta 424587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 263415 - 263750
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||| | |||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||| ||||| | |||||    
T  263415 ctaaccttcttcgactgtgtgcactgtgtactgatatggccctcttcgttacagttataacatacaacatcaccatccttgcaatccgctaaaaggtgac 263514  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  263515 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 263614  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| ||   ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  263615 atctctcctaacgggcctcctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaagacgactctgctgtcccttacctctt 263714  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||||||||||||| ||||| |||||    
T  263715 cgctcactcatcaccttataatgaactttggtgtcc 263750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 40247 - 40575
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||    
T  40247 ctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcgttgcagttataacatacaacatcacaacgcttgcaatccgctaacatgtgac 40346  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  40347 ccttctaaccacacctgaagcacttcttatcatctttggtacaaacattactcttgtggcctttctcgccacacttataacagactatctcagcaggagc 40446  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||    
T  40447 atctctcctattcggcctcctctcatcattcagtctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgttgtcccatacctctt 40546  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    |||||||||||||||||||||||||||||    
T  40547 cgctcactcatcaccttataatgagcttt 40575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 60 - 330
Target Start/End: Original strand, 14144870 - 14145140
Alignment:
Q  60 acatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtgg 159  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14144870 acatacaacatcaccacgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtgg 14144969  T
Q  160 cctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcagggg 259  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14144970 cctttctcgccatacttaaaacaaactatctcagcaggagcatctctcctatatggcctcctctcatcattaagtctctgcttacccttgtcagcagggg 14145069  T
Q  260 cactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14145070 cactgtacggcttaggacgactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 14145140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 14283473 - 14283145
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||  |||||||  |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||    
T  14283473 ctaaccttcttcggctgtgggcactgtgtgctgatatgaccctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctaatgtgtgac 14283374  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| | ||||||||||||    
T  14283373 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggagc 14283274  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| ||   ||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||| || ||||| ||||||||||||   |||    
T  14283273 atctctcctaacgggcctcctctcatcattgagtctctgcttacccttatcagcaggggcactatacggcttcgggcgactctgctgtcccttattcctt 14283174  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    | ||||||||||||||| |||||||||||    
T  14283173 ctctcactcatcaccttgtaatgagcttt 14283145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 18051052 - 18050717
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| | |||||| || |||||||| || || || ||||||||||||||||| ||||||||||| |||| || |||||    
T  18051052 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattataacatacaacatcaccgcgcttgcaatcggctagcatgtgac 18050953  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  18050952 ccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagc 18050853  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||  || ||||| ||||| ||||||||| | || |||||||||||||||    
T  18050852 atccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggagcactatacggtttaggacgattctgatgtcccttacctctt 18050753  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  18050752 cgctcactcatcaccttataatgagctttggtgtcc 18050717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 22 - 329
Target Start/End: Complemental strand, 11385507 - 11385200
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    |||||||||||||| |||||||| || |  || || ||||| ||||||||||| | |||||| | ||| ||   ||| || |||||||||||||||||||    
T  11385507 cactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagc 11385408  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| | || ||||| ||    
T  11385407 acttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaactatctcagcaggagcatctctcctcttgggccttct 11385308  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
    ||||||||| ||||  ||| | ||||||||||||||||||||||||||||||||| |||| || ||||||||||| || ||||||||||||| ||| |||    
T  11385307 ctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggatgactctgttgtcccttacccctccgctcactcatcatcttgtaa 11385208  T
Q  322 tgagcttt 329  Q
    ||||||||    
T  11385207 tgagcttt 11385200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 15099702 - 15099374
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| | || ||||| ||||||||||| || || || |||||||| ||||| || |  || |||||||| |||||| |||    ||| |    
T  15099702 ctaaccttcttcggctgcgtacactgcgaactgatatgaccttcctcattgcagttataacaaacgatgtccccacgcttacaatcatctagagtgtgtc 15099603  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||||||||||||||||||||||||||||||  |   ||||||||||||||||||||||||||| |||||||| || |||||||| |||| ||||||    
T  15099602 ccttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggagc 15099503  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||| ||||||| |  |||||| |||||||||||||||| ||||| |||||| | |||||||| ||||||||||| |||||     
T  15099502 atctctcctcttgggcctcctcccatcatttaacctctgcttacccttgtcagcaggagcactatacggcgtcggacgactctgctgtcccttgcctcta 15099403  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  15099402 cgctcactcatcaccttgtaatgagcttt 15099374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 12712762 - 12712437
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||| |  | || ||||| ||| ||||||| |||||  | |||||||| || ||||||| ||||||||| |||||||||||||||| |||||    
T  12712762 ctaaccttcttccgttgagtgcactgagaattgatatgaccctccccattgcagttatagcatacaatatcaccacgtttgcaatcagctaacacgtgac 12712663  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| ||||||     
T  12712662 ccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcaacaggagt 12712563  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
     |||||    || || || ||||||||||| ||||  ||| | |||||  ||||||| ||||||||||||||||||||||| || |||||||| || ||     
T  12712562 gtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttaccagcaggagcactgtacggcttaggacgactctgttgtcccttgcccctc 12712463  T
Q  301 cgctcactcatcaccttataatgagc 326  Q
    || ||||||||||||||  |||||||    
T  12712462 cgttcactcatcaccttggaatgagc 12712437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 5 - 329
Target Start/End: Complemental strand, 12798596 - 12798275
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||| ||| |||| ||||| ||||||||||| || ||||| || |||||||| || |||||||| |||||||  |||||||||||   ||| || ||    
T  12798596 ccttcttaggctgtgtacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgctcacaatcagctaaagtgtgtccttt 12798497  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||    |||||||| |||||||| || |||| | |||||||    
T  12798496 ctgaccacacctgaagcacttcttctcatc-tcggtcacaaacattactcttgtggcctttt---ccacacttgaaacaaacaatatcagtatgagcatc 12798401  T
Q  204 tctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgc 303  Q
    |||| | ||  |||||||||||||||| | ||||||| |||||||||||||||| ||||| |||||||| |||||||| ||||||||||| ||||| |||    
T  12798400 tctcctcttgagcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctgcgc 12798301  T
Q  304 tcactcatcaccttataatgagcttt 329  Q
    |||||||||||||| ||| |||||||    
T  12798300 tcactcatcaccttgtaaagagcttt 12798275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 22 - 330
Target Start/End: Original strand, 19150182 - 19150490
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||| ||||| ||||| || ||||| || |||||||| || |||| ||| ||||||||||||||||| ||   ||| || |||||||||||||| ||||    
T  19150182 cactgcgaactaatatgtccttcttcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagc 19150281  T
Q  122 acttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcc 220  Q
    ||||||||| ||| | | | ||| || ||||| |||||||||||||| |||||||| || ||||| || |||| ||||||||||||| | || |||||||    
T  19150282 acttcttctgatc-tcgatcacacacattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcc 19150380  T
Q  221 tctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttata 320  Q
    |||||||||| |  |||||| ||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||| | ||||||||||||||||| ||    
T  19150381 tctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcggacgactctgctgtcccttacctatgcgctcactcatcaccttgta 19150480  T
Q  321 atgagctttg 330  Q
    ||||||||||    
T  19150481 atgagctttg 19150490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 22 - 330
Target Start/End: Original strand, 20749581 - 20749889
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||| ||||| ||||| || ||||| || |||||||| || |||| ||| ||||||||||||||||| ||   ||| || |||||||||||||| ||||    
T  20749581 cactgcgaactaatatgtccttcttcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagc 20749680  T
Q  122 acttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcc 220  Q
    ||||||||| ||| | | | ||| || ||||| |||||||||||||| |||||||| || ||||| || |||| ||||||||||||| | || |||||||    
T  20749681 acttcttctgatc-tcgatcacacacattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcc 20749779  T
Q  221 tctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttata 320  Q
    |||||||||| |  |||||| ||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||| | ||||||||||||||||| ||    
T  20749780 tctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcggacgactctgctgtcccttacctatgcgctcactcatcaccttgta 20749879  T
Q  321 atgagctttg 330  Q
    ||||||||||    
T  20749880 atgagctttg 20749889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 329
Target Start/End: Complemental strand, 16947550 - 16947243
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||  || |||||||| || |||||||    ||| || |||||||||||||| |  |    
T  16947550 cactgtgaactgatatgaccctcttcgttgcagttgtagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaacac 16947451  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| |||||||  |   |||| | ||||||||||||||||| || ||||||||  ||||||| || ||| | |||||||||||| | || ||||| ||    
T  16947450 acttcctctcatctctaccacaagcattactcttgtggcctttttcaccacacttgtaacaaacaatttcaactggagcatctctcctcttgggccttct 16947351  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
    ||||||||| | ||||||| | ||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||| ||||||||||||||| |||    
T  16947350 ctcatcattcattctctgctttcccttgtcagcaggggcactgtatggtttaggacgactctgctgtcccttaccccttctctcactcatcaccttgtaa 16947251  T
Q  322 tgagcttt 329  Q
    ||||||||    
T  16947250 tgagcttt 16947243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 26091876 - 26091563
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  26091876 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 26091777  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  26091776 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 26091677  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | |||||||||||||| || | ||||||||| | ||| |||    
T  26091676 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaa 26091577  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  26091576 tgagctttggtgtc 26091563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 40924895 - 40924582
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  40924895 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 40924796  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  40924795 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 40924696  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | |||||||    
T  40924695 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataa 40924596  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  40924595 tgagctttggtgtc 40924582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 21755562 - 21755896
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||||||   |  |||||||| || ||||| |||||| | ||||||||||| || |||| ||| |||||||| || ||||||||   |||||    
T  21755562 ctaaccttcttcggctcaggacactgtgagctaatatgaccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaagtgtgac 21755661  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||||||||||||||| |||||| ||||||| ||   |||||| || |||||||||||||| || ||||||||  ||||||| |||||||  |||||    
T  21755662 ccttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagagggagc 21755761  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || |||||| | |||||| | |   ||||| | || ||||||||||| |||||||| |||||||||||| |||| ||||||||||| ||     
T  21755762 atctctcctcttaggcctcatgtcatcactcatattctgctttcctttgtcagcaggagcactgtaaggcttaggacgattttgttgtcccttacccctc 21755861  T
Q  301 cgctcactcatcaccttataatgagctttgatgtc 335  Q
    | ||||||||| | ||| |||||||||||||||||    
T  21755862 ctctcactcattatcttgtaatgagctttgatgtc 21755896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 49155472 - 49155785
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||    |||||||||||||||||||||||||    
T  49155472 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactatgacccttctgaccacacctgaagc 49155571  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  49155572 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 49155671  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     || |||   |  |||||| | || ||||||||||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | |||||||    
T  49155672 atcctcacccatcctctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataa 49155771  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  49155772 tgagctttggtgtc 49155785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 23 - 329
Target Start/End: Complemental strand, 14261323 - 14261017
Alignment:
Q  23 actgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagca 122  Q
    |||| ||||| ||||| || || || || |||||||| || |||| ||| ||||||||||||||||| ||   ||| || ||||||| |||||| ||| |    
T  14261323 actgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgactacacctaaagta 14261224  T
Q  123 cttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    |||||||||||| | | | ||  || |||||||||||||||||||| |||||||| || ||||  ||||||| |||||||| ||||   || ||||||||    
T  14261223 cttcttctcatc-tcgatgacgcacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatatctccccttaggcctcct 14261125  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
    ||||||||| ||||||| | |||||||||||||||||||||| |||||||| |||||||| | ||||||||||||| | |||||||| |||||||| |||    
T  14261124 ctcatcattcagtctctacttacccttgtcagcaggggcactatacggcttcggacgactctactgtcccttacctttgcgctcactgatcaccttgtaa 14261025  T
Q  322 tgagcttt 329  Q
    ||||||||    
T  14261024 tgagcttt 14261017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 26115668 - 26115355
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||| ||| ||||| || ||| | ||||| |||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  26115668 cactgtgtactaatatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 26115569  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  ||||||| |||||||| |||||||||||| | || ||||||||    
T  26115568 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagccggagcatctctcctcttgggcctcct 26115469  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     |||||| | |   ||||| | || ||||||||||| |||||||| |||||||||||| | || | ||||||||| || | ||||||||| | ||| |||    
T  26115468 atcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttatcccttacccctcctctcactcattatcttgtaa 26115369  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  26115368 tgagctttggtgtc 26115355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 13676601 - 13676899
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||  ||||||||||||||||||||||| || |||||||| || || || |  || || ||||| |||||||||||   ||| |    
T  13676601 ctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtc 13676700  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| |||||||||||| ||||||||||||| ||   |||||| |||||||||||||||||||  ||||||||  | ||||| |||||| |||||||    
T  13676701 ccttctgtccacacctgaagtacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagc 13676800  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    ||||||| | || ||||||||||||||||| |  |||||  | || ||||||||||| ||||| ||||| |||||| |||| |||||||  ||||||||    
T  13676801 atctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcactatacggtttaggatgactctgctgtcatttacctct 13676899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 329
Target Start/End: Original strand, 12459781 - 12460106
Alignment:
Q  4 accttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccct 103  Q
    |||||||||||| | || ||||||||||| ||||| || ||||| |||||||| || || ||||  || |||||||| || |||||||    ||| ||||    
T  12459781 accttcttcggctgagtacactgtgaactaatatgaccttcttcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtccct 12459880  T
Q  104 tctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||||||| || || ||| |||||||  |   |||| | || |||||||||||||| || ||||||||  |||| || |||||||||||| ||||    
T  12459881 tctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatc 12459980  T
Q  204 tctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgc 303  Q
    |||| | || |||||||| |||||||| | | ||||| | |||||||||||| | ||| |||| |||||||||||||| |||||||||||||| || | |    
T  12459981 tctcctcttgggcctcctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttaggacgactctgctgtcccttacccctcctc 12460080  T
Q  304 tcactcatcaccttataatgagcttt 329  Q
    |||||||||||||| |||||||||||    
T  12460081 tcactcatcaccttgtaatgagcttt 12460106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 13965746 - 13965433
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| |||||| | ||||| ||||| || |||| ||| ||||||||||| |||||||    ||||||||||||||||||||||||||    
T  13965746 cactgtgaactgatatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattcagctagactgtgacccttctgaccacacctgaagc 13965647  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    | ||  | ||||| ||   |||||| |||||||||||| ||||||| ||||||||  | ||| | ||||||||||||||||||||| | || ||||||||    
T  13965646 attttctatcatctttaccacaaacattactcttgtggtctttctcaccacacttgtagcaatcaatctcagcaggagcatctctcctcttgggcctcct 13965547  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | ||  |||    
T  13965546 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattatgttgtcccttacccctcctctcactcattatctggtaa 13965447  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  13965446 tgagctttggtgtc 13965433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 335
Target Start/End: Original strand, 13024498 - 13024828
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||||||| | || ||||| ||||||||||| || ||||||||||||||||| || ||||  || |||||||| || |||||||    ||| || ||    
T  13024498 ccttcttcggctgagtacactgagaactgatatgaccttcttcgttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtccttt 13024597  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatct 204  Q
    || |||||||||||| || ||| ||||||   |   | || | || || ||||||||||| || ||||||||  ||||||| || |||||||||||||||    
T  13024598 ctaaccacacctgaaacatttcctctcatatctaccataagcattgcttttgtggcctttttcaccacacttgtaacaaacaatttcagcaggagcatct 13024697  T
Q  205 ctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgct 304  Q
    ||| | || |||||||| |||||||| |  |||||| | || ||||||||||| |||||||| || ||||||||| | | |||||||||||| || | ||    
T  13024698 ctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcagcaggagcactgtaaggtttaggacgattctactgtcccttacccctcctct 13024797  T
Q  305 cactcatcaccttataatgagctttgatgtc 335  Q
    ||||||||||||| |||||||||||| ||||    
T  13024798 cactcatcaccttgtaatgagctttggtgtc 13024828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 169 - 326
Target Start/End: Original strand, 13004783 - 13004940
Alignment:
Q  169 ccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacg 268  Q
    ||||||||||| |||||||||||||||||||  |||||    || || || ||||||||||| ||||  ||| | |||||| |||||||||| |||||||    
T  13004783 ccacacttaaagcaaactatctcagcaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttgccagcaggggcgctgtacg 13004882  T
Q  269 gcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    ||||||||||||| || |||||||| || || || |||||||||||||| ||||||||    
T  13004883 gcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttgtaatgagc 13004940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14140829 - 14140922
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaaca 94  Q
    ||||||||||||||| |||| ||||| | |||||| |||||||||||||| || || |||||||||||||||||||||||||||||||||||||    
T  14140829 ctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcgttacaattataacatacaacatcaccacgcttgcaatcagctaaca 14140922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 330
Target Start/End: Complemental strand, 12203760 - 12203570
Alignment:
Q  140 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctg 239  Q
    ||||||| |||||||||||||| ||||| ||||||||  | ||||| ||| |||||||| |||||||| | || || |||||||||||||| | ||| ||    
T  12203760 tacaaacattactcttgtggcccttctcaccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattcaatctttg 12203661  T
Q  240 cctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcc-ct-tacctcttcgctcactcatcaccttataatgagctttg 330  Q
      | || ||||||||||| |||||||| ||||||||||||| |||||| || || | ||||||  ||||||||| |||||||||||| |||||    
T  12203660 tttccctttgtcagcaggagcactgtagggcttaggacgaccttgctggcctctgttcctctt--ctcactcataaccttataatgaactttg 12203570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 139 - 329
Target Start/End: Original strand, 15627811 - 15628001
Alignment:
Q  139 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 238  Q
    |||||| |||||||||||||||||||||| ||||| ||  | ||||| |  |||||||||| |||| || |  | |||||| |||||||||| |  || |    
T  15627811 gtacaagcgttactcttgtggcctttctcaccacagttgtagcaaacaacttcagcaggagtatctttctttctaggcctcttctcatcattcacccttt 15627910  T
Q  239 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    |  ||||||| |||||||| |||||||| ||||| ||||||||||| || | ||||| | | | |||| |||| ||||| |||||||||||    
T  15627911 gtttacccttatcagcaggagcactgtaaggctttggacgactttgttgactcttacttttcctctcattcataaccttgtaatgagcttt 15628001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 293
Target Start/End: Original strand, 9591653 - 9591805
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| || ||||||||||||||||||||||| || ||||| || ||||| |||||||||||  || | || |||| ||| ||||||   | |||||||    
T  9591653 acaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcaaccattctctgc 9591752  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
     | ||||| ||| |||||||||| || |||||||| ||||| ||||| |||||    
T  9591753 ttgcccttatcaacaggggcactataaggcttagggcgactctgctggccctt 9591805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 12690896 - 12690939
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  12690896 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 12690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 15157932 - 15157889
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  15157932 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 15157889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 8710997 - 8711043
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  8710997 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 8711043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 10873853 - 10873897
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccc 291  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  10873853 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccc 10873897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 11234088 - 11234045
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  11234088 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 11234045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 11549977 - 11549934
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  11549977 tcagcaggggcactgtacggcttaggacgactctgttgtccctt 11549934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 44788226 - 44788183
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| ||||||||||||||||||||||||||| |||||||||||    
T  44788226 tcagtaggggcactgtacggcttaggacgactctgctgtccctt 44788183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 14335788 - 14335834
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||    
T  14335788 ttgtcagcgggggcattgtacggcttaggacgactctgctgtccctt 14335834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 16726422 - 16726360
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| |||||||||||||||||| ||||||| || |||||||| || || |||||||||||    
T  16726422 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 16726360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 17703436 - 17703374
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| |||||||||||||||||| ||||||| || |||||||| || || |||||||||||    
T  17703436 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 17703374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 18587049 - 18587003
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||    
T  18587049 ttgtcagcgggggcattgtacggcttaggacgactctgctgtccctt 18587003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 13689436 - 13689479
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| ||||||||||||||||||||||||||| || ||||||||    
T  13689436 tcagtaggggcactgtacggcttaggacgactctggtgtccctt 13689479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 14957903 - 14957946
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||  | |||||||||    
T  14957903 tcagcaggggcactgtacggcttaggacgaccctactgtccctt 14957946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 293
Target Start/End: Original strand, 11984279 - 11984433
Alignment:
Q  139 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 238  Q
    |||||||| || ||||||||||||||||| ||||| || ||||||   |||||||| ||||||||  || | || ||||  || |||||    | |||||    
T  11984279 gtacaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcatccttcttcttaggccgtctatcatcgaccattctct 11984378  T
Q  239 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |  | ||||| |||||||||||||| || |||||||| ||||| ||||| |||||    
T  11984379 gtttgcccttatcagcaggggcactatagggcttagggcgactctgctggccctt 11984433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 18181138 - 18181184
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    ||||| ||||||||||||||||||||| |||| || |||||||||||    
T  18181138 tcagcgggggcactgtacggcttaggaagactctgttgtcccttacc 18181184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 233; Significance: 1e-129; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 17599 - 17271
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| || |||| |||||   |||||    
T  17599 ctaaccttcttcggctgtgtacactgagtactgatatggccctcttcgttgcaattgtaacatacaacatcaccacgcatgtaatccgctaatgtgtgac 17500  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17499 ccttttgatcacacctaaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttataacaaactatctcagcaggagc 17400  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||||||||||||||||||||| ||||| ||  | |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17399 atctctcctattcggcctcctctcatcattcagtctttgttttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtcccttacctctt 17300  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    |||||||||||||||||||||||||||||    
T  17299 cgctcactcatcaccttataatgagcttt 17271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 4964 - 4640
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||| ||||| |||| ||||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  4964 ctaaccttcctcggctgtgtacactgagtactgatatggccctcctcgttgcagttataacatacaacatcaccacgcttgcaatcagctaacatgtgac 4865  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  4864 ccttctgtccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttctggccacacttataacagactatctcagcaggagc 4765  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||| ||||||||||||||||| ||||| ||| | |||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  4764 atctctcctatttggcctcctctcatcattcagtctttgctttcccttgtcaaaaggggcactgtacggtttaggacgactctgctgtcccttacctctt 4665  T
Q  301 cgctcactcatcaccttataatgag 325  Q
    |||||||||||||||||||||||||    
T  4664 cgctcactcatcaccttataatgag 4640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 6372 - 6037
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||| |  |||| ||||| | |||||| ||||||| |||||| || || || ||||||| ||| |||||||| |||||||||| || |||||    
T  6372 ctaaccttcttctgttgtgtgcactgagtactgatgtggccctattcgttacaattatagcatacaatatcgccacgcttacaatcagctagcacgtgac 6273  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  6272 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcgacaggagc 6173  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  6172 atctctcctattcggcctcctctcatcattcagtctttgcttacccttgtcagcaggggcactgtacggcttaggacgactctgttgtcccttacctctt 6073  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    || ||||||||||| ||||||||||||||| |||||    
T  6072 cgttcactcatcactttataatgagctttggtgtcc 6037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-118; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 17266628 - 17266293
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| | |||||| || |||||||| || || || || |||||||||||||| ||||||||||| |||| || |||||    
T  17266628 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgac 17266529  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  17266528 ccttctgtccacacctgaagcacttcttctcatcctcggtacaaacgttactcttgtgacctttctcgccacacttaaaacacactatctcagcaggagc 17266429  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| || || || |||||||||    
T  17266428 atccctcttactcggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactatacggtttaggacgactctgatgccctttacctctt 17266329  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||||||||||||||||||| |||||    
T  17266328 cgctcactcatcaccttataatgagctttggtgtcc 17266293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 22505774 - 22506087
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    |||||||||||||| || |||||| | ||||||||||| || ||||  || |||||||| || ||||||||    || ||| ||||||||||||||||||    
T  22505774 cactgtgaactgatgtgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaagctatgtcccatctgaccacacctgaagc 22505873  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| |||| || ||   |||||| || ||||||||||||||||| ||||||||  ||||||| ||||||| ||||||||||||| | || ||||||||    
T  22505874 acttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcct 22505973  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     |||||||| |   ||||| | || ||||||||||| |||||||| |||||||||||| | |||||||||||||| || | ||||||||| | |||||||    
T  22505974 atcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttataa 22506073  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  22506074 tgagctttggtgtc 22506087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 141 - 330
Target Start/End: Complemental strand, 21870432 - 21870243
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||| ||||||| |||||||| || |||| |||||||| ||||||||||||| | || ||||||||| ||||||| | | |||||    
T  21870432 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21870333  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
     |||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  21870332 ttacccttgtcagcaggggcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttg 21870243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 141 - 330
Target Start/End: Complemental strand, 21874712 - 21874523
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||| ||||||| |||||||| || |||| |||||||| ||||||||||||| | || ||||||||| ||||||| | | |||||    
T  21874712 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21874613  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
     |||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  21874612 ttacccttgtcagcaggggcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttg 21874523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 5 - 335
Target Start/End: Complemental strand, 23078195 - 23077865
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||||||| | || |||| |||||||||||| || ||||||||||||||||| || ||||  || |||||||| || |||||||    ||| || ||    
T  23078195 ccttcttcggctgagtacactatgaactgatatgaccttcttcgttgcagttgtagcaaacaatgtctccacgcttacattcagctagggtgtgtccttt 23078096  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatct 204  Q
    ||||||||||||||| || ||| |||||||  |   |||| | || || ||||||||||| || |||||||| ||||| || ||||||||||||||||||    
T  23078095 ctgaccacacctgaaacatttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttgaaacatacaatctcagcaggagcatct 23077996  T
Q  205 ctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgct 304  Q
    ||| | || |||||||| |||||||| |   ||||| | || ||||||||||| |||||||| || ||||||||||| |||||||||||||| || | ||    
T  23077995 ctcctcttgggcctcctatcatcattcatcttctgcttccctttgtcagcaggagcactgtaaggtttaggacgactctgctgtcccttacccctcctct 23077896  T
Q  305 cactcatcaccttataatgagctttgatgtc 335  Q
    ||||||| ||||| |||||||||||| ||||    
T  23077895 cactcattaccttgtaatgagctttggtgtc 23077865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 14884264 - 14883951
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| ||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||| ||   ||||||||||||||||||||||||||    
T  14884264 cactgtgaactaatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagccaaactgtgacccttctgaccacacctgaagc 14884165  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   ||| || |||||||||||||||||||| ||||||||  ||||||| |||||||| |||||||||||| | || ||||||||    
T  14884164 acttcctatcatctctcccacagacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagctggagcatctctcctcttgggcctcct 14884065  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |  |||||| | || ||||||| ||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | |||||||    
T  14884064 atcatcacccatcctctgctttcctttgtcagtaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataa 14883965  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  14883964 tgagctttggtgtc 14883951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 25851167 - 25851480
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| ||||| |||||| | ||||||||||| || ||||  || ||||||||| | |||||||    ||||||||||||||||||||||||||    
T  25851167 cactgtgaactaatatgaccctctccattgcagttgtagcagacaatgtctccacgcttgtattcagctagactgtgacccttctgaccacacctgaagc 25851266  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | ||||| ||   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| || ||||||||||| | || ||||||||    
T  25851267 acttcctatcatctttaccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaagagcatctctcctcttgggcctcct 25851366  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | |||||||||||||| || | ||||||||| | ||| |||    
T  25851367 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaa 25851466  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  25851467 tgagctttggtgtc 25851480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 23563462 - 23563134
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| | || ||||| ||||| ||||| || || || |||||||| ||||| |||   || |||| ||| || |||||||    ||| |    
T  23563462 ctaaccttcttcggctgcgtacactgcgaactaatatgaccttcctcattgcagttataacaaacattgtctccacccttacagtcagctagtgtgtgtc 23563363  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||||||||||||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| || |||| ||||||    
T  23563362 ctttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaggagc 23563263  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||| ||| |  |||||| || |||| |||||||| ||||| |||||||| |||| ||| | |||||||||||||||     
T  23563262 atctctcctcttgggcctcctctcattatttaacctctgcttatccttttcagcaggagcactatacggcttcggacaactcttctgtcccttacctcta 23563163  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||| ||| |||||||||||    
T  23563162 cgttcactcatcatcttgtaatgagcttt 23563134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 20345377 - 20345690
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| ||||| || ||  | ||||||||||| || ||||  || ||||||||||| ||| |||    ||||||||||||||||||||||||||    
T  20345377 cactgtgaactaatatgaccttccccattgcagttgtagcagacaatgtccccacgcttgcattcaactagactgtgacccttctgaccacacctgaagc 20345476  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | ||||| ||   |||||| |||||||||||| ||||||| ||||||||  ||||||| ||||||||||||||||||||| | || ||||||||    
T  20345477 acttcctatcatctttaccacaaacattactcttgtgggctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcct 20345576  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| ||||| || |||||||||||| | | |||||||||||| || | ||||||||| | ||| |||    
T  20345577 atcatcacccatcttctgctttcctttgtcagcaggagcactataaggcttaggacgattctactgtcccttacccctcctctcactcattatcttgtaa 20345676  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  20345677 tgagctttggtgtc 20345690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 148 - 329
Target Start/End: Complemental strand, 21983324 - 21983143
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||| ||||| |||||| || | ||||| |||||||||||| |||||||  | || || |||||||||||||| | ||| ||| | || |    
T  21983324 ttactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttccctt 21983225  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||  ||||||| ||||| ||||||| |||||| || ||    || ||||||||||| | |||||||||||||||    
T  21983224 tgtcagcaggaacactgtagggcttcggacgaccttgctgacctttgttcctccgctcactcataaacttataatgagcttt 21983143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 293
Target Start/End: Original strand, 23669769 - 23669998
Alignment:
Q  64 acaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctt 163  Q
    |||| ||||||||||||||| ||||||| |   || |||||||  ||||| | ||||||||||||||| ||     | ||||| ||||||||||||||||    
T  23669769 acaatatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcctt 23669868  T
Q  164 tctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcact 263  Q
    |||| |||||||   |  |||| ||||||||||||||||||||| | || || |||||||||||||| | ||| |||   || |||||| |||| |||||    
T  23669869 tctcaccacactggtaggaaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacaggagcact 23669968  T
Q  264 gtacggcttaggacgactttgctgtccctt 293  Q
    ||| ||||| || |||| ||| || |||||    
T  23669969 gtagggcttcggtcgaccttgttgaccctt 23669998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 43122541 - 43122770
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| |||| ||||||||||||| ||| || |||||||  || ||| | || |||| ||||||||||||||| ||||||| |   || |    
T  43122541 ctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgcatgcc 43122640  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||  ||||| | ||||||||||||||| ||     | || || ||||||||||||||  |||||||||||||  | ||||| ||||| ||| || |    
T  43122641 ccttctttccacatcggaagcacttcttctcctcaccattgcagacattactcttgtggcccctctcgccacacttgtagcaaacaatctctgcatgaac 43122740  T
Q  201 atctctcatattcggcctcctctcatcatt 230  Q
    ||||||| | || || ||||||||||||||    
T  43122741 atctctcctcttaggtctcctctcatcatt 43122770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 27521741 - 27521790
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27521741 ttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 27521790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 21561172 - 21561033
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||| ||||  |||||||| || ||||| |||||||||||| |||||||  | || || |||||||||||||| | ||| ||  | || |    
T  21561172 ttactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgtttccctt 21561073  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    |||||||||  |||||||| ||||| ||||||| ||||||    
T  21561072 tgtcagcagtagcactgtagggcttcggacgaccttgctg 21561033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 18782346 - 18782408
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||    
T  18782346 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18782408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 23474499 - 23474611
Alignment:
Q  214 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatca 313  Q
    ||||||||||||||||| | ||| ||| ||||||| |||||||| ||| |||| ||||| |||||||||||||| ||||| ||| | | |||| |||  |    
T  23474499 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcaatgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaa 23474598  T
Q  314 ccttataatgagc 326  Q
    |||| ||||||||    
T  23474599 ccttgtaatgagc 23474611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 14996787 - 14996744
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  14996787 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 14996744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 22138006 - 22138049
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  22138006 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 22138049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 22329935 - 22329892
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  22329935 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 22329892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 27665559 - 27665508
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  27665559 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 27665508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 27682448 - 27682405
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  27682448 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 27682405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 40712110 - 40712161
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  40712110 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 40712161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 16258189 - 16258103
Alignment:
Q  142 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 228  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  16258189 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 16258103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 16359837 - 16359883
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16359837 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16359883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 22591908 - 22591822
Alignment:
Q  142 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 228  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  22591908 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22591822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 22595463 - 22595377
Alignment:
Q  142 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 228  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||| | || || ||||||||||||    
T  22595463 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22595377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 34569829 - 34569875
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  34569829 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 34569875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 336
Target Start/End: Original strand, 23461102 - 23461398
Alignment:
Q  40 ccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttgg 139  Q
    |||||||| ||||| | | |||| |||| ||||||| ||||||| ||||||||    |||| |||||  ||||||| ||| || |||||| | ||||  |    
T  23461102 ccctcttccttgcaatcgaaacacacaatatcaccatgcttgcattcagctaaagtatgactcttcttgccacaccggaaacatttcttcacctcctctg 23461201  T
Q  140 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctg 239  Q
     |||||| || ||||||||||||||||| ||||| || ||| | || || || |||||||||||  || | || |||| ||| |||||    | |||||     
T  23461202 gacaaacattgctcttgtggcctttctcaccacaattgaaatagacaatttccgcaggagcatccttcttcttaggccgcctatcatcgaccattctcta 23461301  T
Q  240 cctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt-cgctcactcatcaccttataatgagctttgatgtcc 336  Q
      | ||||| |||||||||||||| || |||||||| ||||| ||||| ||||||  |||| |||||| |||  ||||| |||||||||||| |||||    
T  23461302 ttttcccttatcagcaggggcactatagggcttagggcgactctgctggccctta-gtcttccgctcattcacaaccttgtaatgagctttggtgtcc 23461398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 20779059 - 20779147
Alignment:
Q  73 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcc 161  Q
    ||||||||||| ||||| ||||  |||||||||||||| || ||||| || ||||||||||| | ||| ||| | ||||||||||||||    
T  20779059 ccacgcttgcattcagccaacacatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcc 20779147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 23526293 - 23526345
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  23526293 ctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 23526345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 19773298 - 19773341
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  19773298 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 19773341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 294
Target Start/End: Original strand, 21883017 - 21883160
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgt 250  Q
    ||||||||||||||||||||||| |||||||| || |||||||||| | ||||| || |  ||||||  || || ||    | ||||||  | ||||| |    
T  21883017 ctcttgtggcctttctcgccacaattaaaacagacaatctcagcagaaacatctttcttcctcggccgtctatcctcgaccattctctgtttgcccttat 21883116  T
Q  251 cagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
    ||||||||||||| || |||||||| ||||| ||||| ||||||    
T  21883117 cagcaggggcactatagggcttagggcgactctgctggccctta 21883160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 27613694 - 27613737
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  27613694 tcagcaggggcactgtacggcttaggacgactctgttgtccctt 27613737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 41774180 - 41774223
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  41774180 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 41774223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 21332125 - 21331997
Alignment:
Q  159 gcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggg 258  Q
    |||||||||||||||  || | || || |||||| || |||||||| || |  | ||||| ||||||||||||| ||| ||  | ||||| ||||||||     
T  21332125 gcctttctcgccacaagtatagcacacaatctcaacatgagcatctttctttctaggccttctctcatcattaactctttgttttcccttatcagcagga 21332026  T
Q  259 gcactgtacggcttaggacgactttgctg 287  Q
    |||||||| ||||| |||||||| |||||    
T  21332025 gcactgtaaggctttggacgactctgctg 21331997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 287
Target Start/End: Complemental strand, 21631555 - 21631407
Alignment:
Q  139 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 238  Q
    |||||| | |||||| ||||||||||||| |||||  |  | ||||| | |||||||| || |||| || |  | ||||||||| ||||||| |  || |    
T  21631555 gtacaagcattactcgtgtggcctttctcaccacaagtgtagcaaacaacctcagcagtagtatctttctttctaggcctcctcacatcattcacccttt 21631456  T
Q  239 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    |  ||||||| |||||||| |||||||| ||||| ||||||||||||||    
T  21631455 gtttacccttatcagcaggagcactgtaaggctttggacgactttgctg 21631407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 22465096 - 22465184
Alignment:
Q  73 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcc 161  Q
    ||||||||||| ||||| ||||  |||||||||||||| || ||||| || ||||||||||| | | | ||| | ||||||||||||||    
T  22465096 ccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttggatgcaagcattactcttgtggcc 22465184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 22351257 - 22351300
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||    
T  22351257 tcagcaggggcactgtacggcttatgacgactctgctgcccctt 22351300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 26735875 - 26735736
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| ||||||||||| | |||  |  | ||||| |||||| ||||||||||| || |  | ||||||||||||||||||| ||| ||  | || |    
T  26735875 ttactcttatggcctttctcacaacaagtgtagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattaactctttgttttcctt 26735776  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||| ||| |||||||| ||||| |||||||| |||||    
T  26735775 tatcagtaggagcactgtaaggctttggacgactctgctg 26735736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 29473121 - 29473078
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||    
T  29473121 tcagcggggacactgtacggcttaggacgactctgctgtccctt 29473078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 37288544 - 37288501
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| || ||||||||||||||||||||||| |||||||||||    
T  37288544 tcagcgggagcactgtacggcttaggacgactctgctgtccctt 37288501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 335
Target Start/End: Original strand, 21410366 - 21410560
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||| |||||||||| || |||||||| |||||    ||||| || |  |||| ||||| ||||||| |  | |||||||||| |||||| |  || |||    
T  21410366 acaagcgttactcttatgacctttctctccacatcggaaacacacaacttcagtaggagtatctctctttctgggcctcctcttatcattcaccctatgc 21410465  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 335  Q
     ||||||| ||||| || |||||||| || |||  ||||||||| ||   |||||| || |||||| |||| | |||||||||||||||| ||||    
T  21410466 ttacccttatcagctggagcactgtaaggtttaccacgactttgttggtgcttacccctccgctcattcataatcttataatgagctttggtgtc 21410560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 19716669 - 19716341
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||||    ||| |    
T  19716669 ctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttataacaaacaacatcactacgcttgcaatcagctagagtgtgtc 19716570  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  19716569 ctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagc 19716470  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||| ||||||||||||||||| | ||||||| | ||||||||| || |||||||||| || ||||||||||| ||||||||||||||||||    
T  19716469 atctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttaggacgactctgctgtcccttacctctt 19716370  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    |||||||||||||||||||||||||||||    
T  19716369 cgctcactcatcaccttataatgagcttt 19716341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 19721232 - 19720904
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||||    ||| |    
T  19721232 ctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttataacaaacaacatcactacgcttgcaatcagctagagtgtgtc 19721133  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  19721132 ctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagc 19721033  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||| ||||||||||||||||| | ||||||| | ||||||||| || |||||||||| || ||||||||||| ||||||||||||||||||    
T  19721032 atctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttaggacgactctgctgtcccttacctctt 19720933  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    |||||||||||||||||||||||||||||    
T  19720932 cgctcactcatcaccttataatgagcttt 19720904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 12577144 - 12577479
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| | |||||| || |||||||| || || || || |||||||||||||| ||||||||||| |||| || |||||    
T  12577144 ctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgac 12577243  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  12577244 ccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagc 12577343  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| || ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||| | || |||||||||||||||    
T  12577344 atccctcttactcggcctcctctcatcattaagtctctgcttacccttgtcagccggggcactatacggtttaggacgattctgatgtcccttacctctt 12577443  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||| ||||||||||||||| |||||    
T  12577444 cgctcactcatcactttataatgagctttggtgtcc 12577479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 23097670 - 23097342
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||| |||||| ||| | || |||||||||||||| |||||||| || |  || || ||||| ||||||||||| | |||||| | ||| ||   ||| |    
T  23097670 ctaatcttctttggctgagtgcactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtc 23097571  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||| ||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  23097570 ctttctgaccacacttgaagcacttcttctgatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagcaggagc 23097471  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| ||||  ||| | ||||||||||||||||||||||||||||||||  |||| || ||| | ||||||||     
T  23097470 atctctcctcttgggcctcctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttagggagactctgatgtgctttacctctc 23097371  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  23097370 cgctcactcatcaccttgtaatgagcttt 23097342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 23274384 - 23274709
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||| ||||||||||||||||||||||| || |||||||| || || || |  || || ||||| |||||||||||   ||| |    
T  23274384 ctaaccttcttcggttgtgtgcactgtgaactgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtc 23274483  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||||    ||||| || |||| ||||||    
T  23274484 ccttctgtccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttgttgcaaacaatttcagtaggagc 23274583  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| ||| |||| |||||||| || |||||||| || ||     
T  23274584 atctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatactgcttcggacgactctgttgtcccttgccccta 23274683  T
Q  301 cgctcactcatcaccttataatgagc 326  Q
    || |||||||||||||| ||||||||    
T  23274684 cgttcactcatcaccttgtaatgagc 23274709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 20848401 - 20848711
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  20848401 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 20848500  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | | ||| |||||| |||||||||||||| | ||  |  ||||    
T  20848501 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagc-aacaatctcaacaggagcatctctcctctt--ggatcct 20848597  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | |||||||    
T  20848598 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataa 20848697  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  20848698 tgagctttggtgtc 20848711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 28350687 - 28350958
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||| ||||||| ||| || |||||||  || ||| | || |||| ||||||||||||||| ||||||| |   || || ||||  ||||| | |||||    
T  28350687 cactgcgaactgagatgaccttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagc 28350786  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    |||| ||||||||     | ||||| |||||||||||||||||||| ||||||||  | ||||| |||||||||||| |||||||| | || || |||||    
T  28350787 actttttctcatcaccattgcaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcct 28350886  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||| | ||| |||   || |||||| |||| ||||| || ||||| ||||||| |||||| |||||    
T  28350887 ctcatcattcaatctttgctcccctttgtcaacaggagcactatagggcttcggacgaccttgctgaccctt 28350958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 325
Target Start/End: Original strand, 21901391 - 21901652
Alignment:
Q  64 acaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctt 163  Q
    |||| ||||||||||||||| ||||||| |   || || ||||  ||||| | ||||||||| ||||||||     | ||||| |||||||||||||| |    
T  21901391 acaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagcactttttctcatcaccattgcaaacattactcttgtggccct 21901490  T
Q  164 tctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcact 263  Q
    |||| ||||||||  | ||||| ||||||| |||| |||||||  | || || |||||||||||||| | ||||||  | || ||||||||||| |||||    
T  21901491 tctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctctgtttccctttgtcagcaggagcact 21901590  T
Q  264 gtacggcttaggacgactttgctgtccct--tacctcttcgctcactcatcaccttataatgag 325  Q
    ||| ||||| ||| ||| ||| || || |  | ||||||  ||||||||| |||||||||||||    
T  21901591 gtagggcttcggatgaccttgatggcctttgttcctctt--ctcactcataaccttataatgag 21901652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 24657242 - 24657108
Alignment:
Q  69 atcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcg 168  Q
    ||||||| | ||||||||||||||   |||||||||||  ||||||| ||| ||||||||| | ||||  | ||||||  |||||||||||||||||||     
T  24657242 atcaccatgtttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctca 24657143  T
Q  169 ccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||| || ||||||   |||||||||||| ||||    
T  24657142 ccacaattgaaacaagtaatctcagcaggaacatc 24657108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 286
Target Start/End: Complemental strand, 23116571 - 23116426
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||||||| ||||||| || |||||||| ||||| | |||||||||  || | || |||| ||| |||||    | |||||||    
T  23116571 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatctctgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgc 23116472  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgct 286  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||    
T  23116471 ttgcccttatcagcaggggcactataaggcttagggcgactctgct 23116426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 44382982 - 44382933
Alignment:
Q  244 cccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  44382982 cccttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 44382933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 11351324 - 11351161
Alignment:
Q  40 ccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttgg 139  Q
    |||||||| ||||| ||| | || |||| ||||| | ||||||||||||||||    ||||||||||  ||||||| ||| || ||||   | ||||| |    
T  11351324 ccctcttccttgcaattgaagcacacaatatcactatgcttgcaatcagctaatgtatgacccttcttgccacaccagaaacatttctctacctcctttg 11351225  T
Q  140 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
     |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||    
T  11351224 gacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 11351161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 17002037 - 17002080
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  17002037 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 17002080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 22322756 - 22322705
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  22322756 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 22322705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 24265407 - 24265450
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  24265407 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 24265450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 24713063 - 24713114
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  24713063 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 24713114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 9338616 - 9338662
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  9338616 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 9338662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 9487250 - 9487296
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  9487250 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 9487296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 10871887 - 10871933
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    |||||||||||||||||||||||||||||||| || |||||||||||    
T  10871887 tcagcaggggcactgtacggcttaggacgactctgttgtcccttacc 10871933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 16984274 - 16984320
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16984274 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16984320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 22462993 - 22462931
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| |||||||||||||||||||| ||||| || |||||||| ||||| |||||||||||    
T  22462993 acaaacattactcttgtggcctttctcaccacagttgaaacaaacaatctccgcaggagcatc 22462931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 23205245 - 23205306
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 202  Q
    |||||| |||||||||||||||||||||||||| || |||||||| ||||| | ||||||||    
T  23205245 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 23676849 - 23676910
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 202  Q
    |||||| |||||||||||||||||||||||||| || |||||||| ||||| | ||||||||    
T  23676849 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23676910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 21320505 - 21320459
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcagg 197  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||    
T  21320505 ctcttgtggcctttctcgccacaattaaaacagacaatctcagcagg 21320459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 27374303 - 27374349
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||    
T  27374303 ttgtcagcgggggcactgtacggcttaggacgactctgcagtccctt 27374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 16931598 - 16931635
Alignment:
Q  256 ggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16931598 ggggcactgtacggcttaggacgactctgctgtccctt 16931635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 203
Target Start/End: Complemental strand, 24705060 - 24704932
Alignment:
Q  75 acgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacac 174  Q
    ||||||||||||||||||   |||||||||||  ||||||  ||| || |||||  | ||||  | |||||| || ||||||||||||||||| |||||     
T  24705060 acgcttgcaatcagctaaagtgtgacccttcttgccacactggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcaccacaa 24704961  T
Q  175 ttaaaacaaactatctcagcaggagcatc 203  Q
    || ||||| |  |||||||||||| ||||    
T  24704960 ttgaaacagataatctcagcaggaacatc 24704932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 275
Target Start/End: Complemental strand, 24817354 - 24817218
Alignment:
Q  139 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 238  Q
    |||||| | |||||||||||||| ||||| |||||  || | ||||| ||||||| || || |||| || |  | ||||||||||||||||| | ||| |    
T  24817354 gtacaagcattactcttgtggcccttctcaccacaagtatagcaaacaatctcagtagtagtatctttctttctaggcctcctctcatcattcaatcttt 24817255  T
Q  239 gcctacccttgtcagcaggggcactgtacggcttagg 275  Q
    |  ||||||| |||||||| ||||| || ||||||||    
T  24817254 gtttacccttatcagcaggagcactataaggcttagg 24817218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 24874156 - 24874113
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||    
T  24874156 tcagcaggggcactgtacggcttagaacgactctgccgtccctt 24874113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 23028963 - 23028912
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||||||||||| ||||| | |||||| || |||||||||||||||||    
T  23028963 ctcttgtggcctttctcaccacaat-aaaacagacaatctcagcaggagcatc 23028912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 24678428 - 24678480
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||    
T  24678428 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatc 24678480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 200; Significance: 1e-109; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 602 - 267
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||||||    ||| |    
T  602 ctaaccttcttcggctgtgtgcactgtgaactgatatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatcagctaggctgtgtc 503  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||  |||||| ||  ||||||| ||||||||||||||    
T  502 ctttctgaccacacctgaaacacttcttctcatccttggtacaaacatcactcttgtggcctttcctgccacatttgtaacaaacgatctcagcaggagc 403  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||| ||||||||||||||||| | | ||||| | ||||||||||||||||||||||||||||||||  |||| || |||||||||||||||    
T  402 atctctcctattgggcctcctctcatcattcaatatctgctttcccttgtcagcaggggcactgtacggcttagggtgactctgttgtcccttacctctt 303  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    || ||||||||||||||||||||||||||| |||||    
T  302 cgttcactcatcaccttataatgagctttggtgtcc 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 21003 - 21331
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||| ||||||||||||||| ||||||| || |||||||| || || |  |  || || ||||| |||||| ||||   ||| |    
T  21003 ctaaccttcttcggttgtgtacactgtgaactgatacggccctcctcattgcagttatagcaaattatgtctccccgcttacaatcaactaatgtgtgtc 21102  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| |||||||||||||||||||||||| | || |||||||| |||||||||||||||||||| ||||||||  | ||||| |||||||||| |||    
T  21103 ccttctgtccacacctgaagcacttcttctcacctttagtacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcagaagc 21202  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| || |||||  | || ||||||||||||||||| ||||| ||||||||||| | ||||||||| ||| |     
T  21203 atctctcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcaggggcactatacggtttaggacgactctactgtcccttgccttta 21302  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  21303 cgctcactcatcaccttgtaatgagcttt 21331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 53750582 - 53750247
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| | |||||| ||||||||||| || || || || |||||||||||||| ||||||||||| |||| || |||||    
T  53750582 ctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtgac 53750483  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  53750482 ccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagc 53750383  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||  |||||||| ||||| ||||||||| | || |||||||||||||||    
T  53750382 atccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctctt 53750283  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||| ||||||||||||||| |||||    
T  53750282 cgctcactcatcactttataatgagctttggtgtcc 53750247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 51603904 - 51603569
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| | |||||| ||||||||||| || || || || || ||||||||||| ||||||||||| |||| || |||||    
T  51603904 ctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaattatagcacacaacatcaccgcgcttgcaatcggctagcatgtgac 51603805  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  51603804 ccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggagc 51603705  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| || ||||||||||||||||||||||||||||| ||||||| ||||  |||||||| ||||| ||||||||| | || |||||||||||||||    
T  51603704 atccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctctt 51603605  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||||||| ||||||||||||||| |||||    
T  51603604 cgctcactcatcactttataatgagctttggtgtcc 51603569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 14993479 - 14993151
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||  | || ||||| ||||||||||| || || || ||||||||||| || |||||||| ||| ||||||||||||||||   ||| |    
T  14993479 ctaaccttcttaggttgcgtacactgcgaactgatatgaccttcctcattgcagttgtagcaaacaacatccccatgcttgcaatcagctaaagtgtgtc 14993380  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||||||||||||||  ||   |  |||||| ||||||||||||||||| || |||||||| |||||||| || |||| ||||||    
T  14993379 ctttctgaccacacctgaagcacttcttcttctcacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagc 14993280  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| | ||||||| |||||||||||||||||||||| ||||||||  ||||||| || |||||||| |||||     
T  14993279 atctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcagacgactctgttgtcccttgcctcta 14993180  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  14993179 cgctcactcatcaccttgtaatgagcttt 14993151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 34 - 329
Target Start/End: Original strand, 16150829 - 16151124
Alignment:
Q  34 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcat 133  Q
    ||||| |||||||| |  ||||| || || ||||||||||||||||||||||||||||    ||| || |||||||||||||||||||||||||||||||    
T  16150829 atatgcccctcttcatcacagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcat 16150928  T
Q  134 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaag 233  Q
    | || |||||||| |||||||||||||||||||||||||||||| | ||||| || ||| |||||||||||||| | || ||||||||||||||||| |     
T  16150929 ctttagtacaaacattactcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaa 16151028  T
Q  234 tctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
      ||||| | || ||||||| ||| ||||| |||||||| |||||||| |||||||| || || ||||| |||||||||||||| |||||||||||    
T  16151029 cttctgctttcctttgtcagtaggagcactatacggcttcggacgactctgctgtcctttgccccttcgatcactcatcaccttgtaatgagcttt 16151124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 34 - 329
Target Start/End: Original strand, 16154975 - 16155270
Alignment:
Q  34 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcat 133  Q
    ||||| |||||||| |  ||||| || || ||||||||||||||||||||||||||||    ||| || |||||||||||||||||||||||||||||||    
T  16154975 atatgcccctcttcatcacagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcat 16155074  T
Q  134 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaag 233  Q
    | || |||||||| |||||||||||||||||||||||||||||| | ||||| || ||| |||||||||||||| | || ||||||||||||||||| |     
T  16155075 ctttagtacaaacattactcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaa 16155174  T
Q  234 tctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
      ||||| | || ||||||| ||| ||||| |||||||| |||||||| |||||||| || || ||||| |||||||||||||| |||||||||||    
T  16155175 cttctgctttcctttgtcagtaggagcactatacggcttcggacgactctgctgtcctttgccccttcgatcactcatcaccttgtaatgagcttt 16155270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 15266936 - 15267264
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| | || ||||  ||||||||||| || |||||||||||||| || || ||||  || ||| |||| ||||||||||    ||| |    
T  15266936 ctaaccttcttcggctgcgtacactacgaactgatatgaccttcttcgttgcagttatagcaaacaatgtctccatgcttacaatcagctagagtgtgtc 15267035  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||||||||||||||||||  ||  |||||| |||||||| ||||| |||||  ||||||| || ||||| || |  | ||||||    
T  15267036 ctttctgaccacacctgaagcacttcttctcatctctgtcacaaacattactcttatggcccttctcatcacacttgaagcaaacaatattcgtaggagc 15267135  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| |||||||| |||||||| || |||||||| |||||     
T  15267136 atctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcctctg 15267235  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  15267236 cgttcactcatcaccttgtaatgagcttt 15267264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 20893191 - 20893525
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||||||   || ||||| ||||||||||| |||||||| |||||||||||  | |||| ||| ||||||||||| ||||||||   ||| |    
T  20893191 ctaaccttcttcggctcagtacactgcgaactgatatgcccctcttcattgcagttgtagtagacaatatccccacgcttgcattcagctaaattgtgtc 20893290  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||| |||||||  |   |||||| || ||||||| |||||| || ||||||||  ||||||| ||||||| ||||||    
T  20893291 ccttctgaccacacctgaagcacttcctctcatctctaccacaaacattgctcttgttgcctttttcaccacacttgtaacaaacaatctcagaaggagc 20893390  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || |||||||| |||||||| |   ||||| | || ||||||||||| ||||| || |||||||||||||| ||||||||||| || ||     
T  20893391 atctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactttaaggcttaggacgactctgctgtcccttgcccctc 20893490  T
Q  301 cgctcactcatcaccttataatgagctttgatgtc 335  Q
    | ||||||||| | ||| |||||||||||| ||||    
T  20893491 ctctcactcattatcttgtaatgagctttggtgtc 20893525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 3261885 - 3261572
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  3261885 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 3261786  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  3261785 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 3261686  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | |||||||||||||| || | ||||||||| | ||| |||    
T  3261685 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaa 3261586  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  3261585 tgagctttggtgtc 3261572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 29 - 325
Target Start/End: Original strand, 18259629 - 18259925
Alignment:
Q  29 aactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttctt 128  Q
    |||||||||| || || || |||||||| || || ||||  || |||||||| ||||||||||    ||| || ||||||||||||||||||||||||||    
T  18259629 aactgatatgaccttcctcattgcagttatagcaaacaatgtccccacgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttctt 18259728  T
Q  129 ctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatca 228  Q
    ||||||  |   |||||| ||||||||||||||||| || ||||||||||| ||||| || | || |||||||||| || | || |||||||||||||||    
T  18259729 ctcatctctatcacaaacattactcttgtggcctttttcaccacacttaaagcaaacaatattagtaggagcatctgtcctcttgggcctcctctcatca 18259828  T
Q  229 ttaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgag 325  Q
    || |  |||||| |||||||||||||||| ||||| |||||||| ||| |||| ||||||||||| || || ||||||||||||||||| |||||||    
T  18259829 tttaacctctgcttacccttgtcagcaggagcactatacggcttcggatgactctgctgtcccttgcccctacgctcactcatcaccttgtaatgag 18259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 64 - 329
Target Start/End: Original strand, 15073582 - 15073847
Alignment:
Q  64 acaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctt 163  Q
    |||||||||| | ||||||||||||||||   ||| || ||||  |||||||| || ||||||||||||||   |  ||| || ||||||||||||||||    
T  15073582 acaacatcacaaagcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctt 15073681  T
Q  164 tctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcact 263  Q
    | || |||||||| ||||| || ||||||| ||||||||||||| |  | ||||||||||||||||| ||||||||  || | ||||||||||| |||||    
T  15073682 tttcaccacacttgaaacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgtcagcaggagcact 15073781  T
Q  264 gtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
     ||||| || ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||    
T  15073782 atacggtttcggacgactcagctgtcccttacctctacgctcactcatcaccttataatgagcttt 15073847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 7357448 - 7357761
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| ||||| |||||| | ||||||||||| || ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  7357448 cactgtgaactaatatgaccctctccattgcagttgtagcagacaatgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaagc 7357547  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| ||||||| ||   | |||| || ||||||||||||||||| |||| |||  ||||||| ||||||||||||||||||||| | || ||||||||    
T  7357548 acttcctctcatctttaccataaacattgctcttgtggcctttctcaccactcttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcct 7357647  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| ||| |||| |||||||||||| | || ||||||||||| || | ||||||||| | ||| |||    
T  7357648 atcatcacccatcttctgctttcctttgtcagcaggagcaatgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatcttgtaa 7357747  T
Q  322 tgagctttgatgtc 335  Q
    ||||| ||| ||||    
T  7357748 tgagccttggtgtc 7357761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 11204323 - 11204010
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| |||||| | ||||| ||||| || |||| ||| ||||||||||| | |||||    ||||||||||||||||||||||||||    
T  11204323 cactgtgaactgatatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattaagctagactgtgacccttctgaccacacctgaagc 11204224  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    | ||  | |||||  |   |||||| || ||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||| | || || |||||    
T  11204223 attttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcct 11204124  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     |||||||| |   ||| | | || ||||||||||| ||||| || |||||||||||| | |||||||||||||| || | ||||||||| | ||| |||    
T  11204123 atcatcattcatcttctactttcctttgtcagcaggagcactataaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaa 11204024  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  11204023 tgagctttggtgtc 11204010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 29450628 - 29450315
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    |||||||||||||| || || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   |||||||||||||||||||||||| |    
T  29450628 cactgtgaactgatgtgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaaac 29450529  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||      |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  29450528 acttcctatcatctcctccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttaggcctcct 29450429  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| || ||||||||| | || ||||||||||| || | ||||||||| | |||||||    
T  29450428 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggtttaggacgattctgttgtcccttacccctcctctcactcataatcttataa 29450329  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  29450328 tgagctttggtgtc 29450315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 44658957 - 44658644
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| ||||| |  ||| | ||||| |||||||| |||| ||| ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  44658957 cactgtgaactaatatgacattctccattgcaattgtaacagacaatatccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 44658858  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  44658857 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 44658758  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     |||| |   |   ||||| | || ||||| ||||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | ||| |||    
T  44658757 atcatgacccatcttctgctttcctttgtccgcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatcttgtaa 44658658  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  44658657 tgagctttggtgtc 44658644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 27903566 - 27903751
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| || | |||||| || || ||||| ||||| |||| ||| ||||||||||| ||||| ||||  ||||| ||||||||||| ||||| |    
T  27903566 cactgtgaactaatgttgccctcctcattacagttataacaaacaatatctccacgcttgcattcagccaacacatgacctttctgaccacatctgaaac 27903665  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctc 207  Q
    ||||||||||||| ||||| || || |||||||||||||||||| | ||||||||  ||||||| |  ||| ||||||||||||||    
T  27903666 acttcttctcatctttggtgcagacattactcttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctc 27903751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 148 - 330
Target Start/End: Original strand, 14697408 - 14697590
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| ||||||||||| |||||  || | ||||| |||||||||| ||||||| || |  | ||||||||||||||||| | ||| ||| ||||||    
T  14697408 ttactcttatggcctttctcaccacaagtatagcaaacaatctcagcagtagcatctttctttctaggcctcctctcatcattcaatctttgcttaccct 14697507  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
    | |||||||| |||||||| ||||| |||||||||||||| ||||| ||| | | |||| |||  || || ||||||||||||    
T  14697508 tatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaactttgtaatgagctttg 14697590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 326
Target Start/End: Original strand, 13879290 - 13879594
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||| ||| || |||||||  || ||| | || |||| || |||||||||||| ||||||| |   || |||||||  ||||| | |||||    
T  13879290 cactgtgaactgagatgaccttcttcgtcacaattgaagcaaacaatatgaccacgcttgcattcagctatcgtatggcccttctttccacatcggaagc 13879389  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    |||||||||| || |   | || || |||||||||||||| ||||| ||||||||  ||||||| ||||||| || | |||||||  | || || |||||    
T  13879390 acttcttctcctcatcattgcatacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtagaaacatctcttctcttaggtctcct 13879489  T
Q  222 ctcatcattaagtctctgcctaccc-ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttata 320  Q
    ||||||||| | ||| || |||||| |||||| |||| |||||||| ||||| ||||||| |||||| |||||    || ||||||||| | ||||||||    
T  13879490 ctcatcattcaatctttg-ctaccctttgtcatcaggagcactgtagggcttcggacgaccttgctgacccttgttcctccgctcactcctaaccttata 13879588  T
Q  321 atgagc 326  Q
    ||||||    
T  13879589 atgagc 13879594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 332
Target Start/End: Original strand, 8708978 - 8709168
Alignment:
Q  142 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcc 241  Q
    ||||| |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| ||||| |  | || || |||||||||||||| | ||| |||     
T  8708978 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgct 8709077  T
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgat 332  Q
    | || ||||||||||| ||||| ||  |||| ||||||| |||||| || ||    || ||||||||||| ||||| ||||||||||||||    
T  8709078 tccctttgtcagcaggagcactatagagcttcggacgaccttgctgacctttgttcctccgctcactcataaccttgtaatgagctttgat 8709168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 294
Target Start/End: Complemental strand, 18604531 - 18604378
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||||||||||||||| ||||||||||  ||||| | |||||||||  || | || |||| ||| |||||    | |||||||    
T  18604531 acaaacattactcttgtggcctttctcgccacagttaaaacaaataatctccgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgc 18604432  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
     | ||||| |||||||||||| | || |||||||| ||||| ||||| ||||||    
T  18604431 ttgcccttatcagcaggggcattataaggcttagggcgactctgctggccctta 18604378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 293
Target Start/End: Original strand, 13513650 - 13513802
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| || ||||||||||||||||||||||| || ||||| || ||||| |||||||||||  || | || |||| ||| ||||||   | |||||||    
T  13513650 acaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcaaccattctctgc 13513749  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
     | ||||| ||| |||||||||| || |||||||| ||||| ||||| |||||    
T  13513750 ttgcccttatcaacaggggcactataaggcttagggcgactctgctggccctt 13513802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 8389810 - 8389861
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  8389810 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 8389861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 287
Target Start/End: Original strand, 8343 - 8482
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| || |  | || | ||||||||||   | ||||||  ||||||    
T  8343 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttatagggcgcctctcatcaaccattctctgtttaccct 8442  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  8443 tatcagcaggagcactgtaaggcttaggacgactctgctg 8482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 8050229 - 8050186
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  8050229 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 8050186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 14300585 - 14300542
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  14300585 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 14300542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 19775407 - 19775356
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  19775407 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 19775356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 23959145 - 23959196
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  23959145 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 23959196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 27714734 - 27714785
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  27714734 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 27714785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 12480003 - 12480049
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  12480003 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 12480049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 16233601 - 16233555
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16233601 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16233555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 17091758 - 17091712
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  17091758 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 17091712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 18224185 - 18224123
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| |||| ||||||||||||||||||||| || |||||||| ||||| |||||||||||    
T  18224185 acaaacattacacttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18224123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 16219495 - 16219628
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| |||||||||||||||||  || | || |  |||||| ||||||||||| || |  | ||||||||||| ||||||| ||| ||  | ||||    
T  16219495 ttactcttatggcctttctcgccacaagtatagcacataatctcaacaggagcatctttctttctaggcctcctctcgtcattaactctttgttttccct 16219594  T
Q  248 tgtcagcaggggcactgtacggcttaggacgact 281  Q
    | |||||||| |||||||| ||||| ||||||||    
T  16219595 tatcagcaggagcactgtaaggctttggacgact 16219628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 16222815 - 16222948
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| |||||||||||||||||  || | || |  |||||| ||||||||||| || |  | ||||||||||| ||||||| ||| ||  | ||||    
T  16222815 ttactcttatggcctttctcgccacaagtatagcacataatctcaacaggagcatctttctttctaggcctcctctcgtcattaactctttgttttccct 16222914  T
Q  248 tgtcagcaggggcactgtacggcttaggacgact 281  Q
    | |||||||| |||||||| ||||| ||||||||    
T  16222915 tatcagcaggagcactgtaaggctttggacgact 16222948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 15741 - 15602
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| || |  | || | ||||||||||   | ||||||  ||||||    
T  15741 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctgtttaccct 15642  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| | |||||||||||| |||||    
T  15641 tatcagcaggagcactgtaagtcttaggacgactctgctg 15602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 14683973 - 14684016
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||||||||| |||||||||||||| |||||||||||    
T  14683973 tcagcaggggcactgtatggcttaggacgactctgctgtccctt 14684016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 40476446 - 40476489
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  40476446 tcagcaggggcactgtacggcttaggacgactccgctgtccctt 40476489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 14162871 - 14162923
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
    ||||||| |||||||| |||||||| |||||||||||||| || |||||||||    
T  14162871 tacccttatcagcaggagcactgtaaggcttaggacgactctgttgtccctta 14162923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 19635542 - 19635585
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||    
T  19635542 tcagcgggggcactgtacggcttaggacaactctgctgtccctt 19635585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 193; Significance: 1e-105; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 64717 - 64389
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||| ||||||||||| |||||||||||||| |  || || || || || ||||||||||||||||||| |||||    ||| |    
T  64717 ctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtc 64618  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  64617 ctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaactatctcagcaggagc 64518  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| ||||||||||||| |||||||| ||||||||| | ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||    
T  64517 atccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctctt 64418  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    |||||||||||||||||||||||||||||    
T  64417 cgctcactcatcaccttataatgagcttt 64389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 49295 - 48967
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||| ||||||||||| |||||||||||||| |  || || || || || ||||||||||||||||||| |||||    ||| |    
T  49295 ctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtc 49196  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  49195 ctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggagc 49096  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| ||||||||||||| |||||||| ||||||||| | ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||    
T  49095 atccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctctt 48996  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    |||||||||||||||||||||||||||||    
T  48995 cgctcactcatcaccttataatgagcttt 48967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 58329 - 58001
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||| ||||||||||| |||||||||||||| |  || || || || || ||||||||||||||||||| |||||    ||| |    
T  58329 ctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgtc 58230  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  58229 ctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggagc 58130  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| ||||||||||||| |||||||| ||||||||| | ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||    
T  58129 atccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctctt 58030  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    |||||||||||||||||||||||||||||    
T  58029 cgctcactcatcaccttataatgagcttt 58001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 29813 - 30141
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  | || ||||| ||||||||||| || || || |||||  | ||||| || |  || |||| ||| ||||||||||    ||| |    
T  29813 ctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcaaatataacaaacgatgtccccacacttacaatcagctagagtgtgtc 29912  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||| |||||||||||||||||||||||||||||  |   ||||||||||||||||||||||||||| |||||||| || |||||||| |||| |||| |    
T  29913 ccttttgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggaac 30012  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| |||||||| |||||||| ||||||||||| |||||     
T  30013 atctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctcta 30112  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  30113 cgctcactcatcaccttgtaatgagcttt 30141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 53538 - 53204
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||||||  ||| || ||||||||||||||||||||||| || ||||| |||||||| || |||||||||||||||||| |||  | ||| |    
T  53538 ctaaccttcttcggctatgtgcattgtgaactgatatggccctcttcattacagttataacataccacgtcaccacgcttgcaatcaactaggatgtgtc 53439  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | || |||||||||||||| || |||||||||||||| |||||||| |||||||||||||||||||||||||||||  ||||||| ||| ||||| ||||    
T  53438 ctttttgaccacacctgaatcatttcttctcatccttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatcccagcaagagc 53339  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||| ||||||||||||||||| | ||||||| | ||||||||||||||||||||||| || |||||||||  ||| ||||||||| |||||    
T  53338 atctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcagcaggggcactgtatggtttaggacgaacttgatgtcccttatctctt 53239  T
Q  301 cgctcactcatcaccttataatgagctttgatgtc 335  Q
    |||||||||||||||||||||||||| ||| ||||    
T  53238 cgctcactcatcaccttataatgagccttggtgtc 53204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 178; Significance: 6e-96; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 98698 - 98373
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    ||| |    
T  98698 ctaaccttcttcggctgtgtgcactgcgaactgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctagagtgtgtc 98599  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  98598 ctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagc 98499  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    |||||||   || ||||||||||||||||| |  |||||| |||||||||||||| | ||||| || ||||| |||||||| || ||||||||||||||     
T  98498 atctctccacttgggcctcctctcatcatttaacctctgcttacccttgtcagcatgagcactatatggcttcggacgactctgttgtcccttacctctc 98399  T
Q  301 cgctcactcatcaccttataatgagc 326  Q
    |  |||||||| ||||| ||||||||    
T  98398 ctttcactcattaccttgtaatgagc 98373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 64 - 329
Target Start/End: Original strand, 176239 - 176504
Alignment:
Q  64 acaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctt 163  Q
    |||||||||||||||||||||||||||||   ||| || ||||  |||||||| || ||||||||||||||   |  ||| || ||||||||||||||||    
T  176239 acaacatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctt 176338  T
Q  164 tctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcact 263  Q
    | || |||||||| ||||| || ||||| | ||||||||||||| |  | ||||||||||||||||| ||||||||  || | ||||  ||||| |||||    
T  176339 tttcaccacacttgaaacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgttggcaggagcact 176438  T
Q  264 gtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
     ||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  176439 atacggtttcggacgactctgctgtcccttacctctacgctcactcatcaccttataatgagcttt 176504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 22311 - 22639
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||| || || |||||||||||||||||||||||| |||    ||| |    
T  22311 ctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatcaactagggtgtgtc 22410  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||| ||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||||||||  ||||||| |||||| |||||||    
T  22411 ctttctgaccacacttgaagcatttcttctcatccttagtaaaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcaacaggagc 22510  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||| ||||||||||||||||| ||||| ||  | || ||||| |||||||||||||| || |||||| |||| | |||||||||||| |||    
T  22511 atctctcctattgggcctcctctcatcattcagtctttgatttcctttgtcggcaggggcactgtatggtttaggaagactctactgtcccttacccctt 22610  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||| ||||||||||| |||||||||||||    
T  22611 cgcccactcatcaccatataatgagcttt 22639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 169; Significance: 1e-90; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 164516 - 164188
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| | ||  | || |||||||||||||| ||||| |||||||| ||||| ||||||| |||||||||||||||| ||||   ||| |    
T  164516 ctaaccttcttcggctgagtataatgcgaactgatatggccttcttcattgcagttataacaaacaacattaccacgcttgcaatcaactaaagtgtgtc 164417  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| ||||||||||||||||| | |||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  164416 ctttctgaccacacctgaaacacttcttctcatccttagaacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagc 164317  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
     |||||| |||| ||||||||||||||||| |  |||||  | ||||||||||||||||||||||| |  ||||||||||| |||||||| |||||||||    
T  164316 gtctctcctattgggcctcctctcatcattcaacctctgttttcccttgtcagcaggggcactgtatgatttaggacgactctgctgtcctttacctctt 164217  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  164216 cgttcactcatcaccttgtaatgagcttt 164188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 30539 - 30487
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  30539 ctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 30487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 168; Significance: 5e-90; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 23 - 326
Target Start/End: Complemental strand, 11999 - 11696
Alignment:
Q  23 actgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagca 122  Q
    |||| ||||||||||| || |||||||| ||  ||||||| ||||  ||||||||||||||||||||||    ||| || ||||||||||||||||||||    
T  11999 actgcgaactgatatgaccttcttcgttccaaatgtaacaaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagca 11900  T
Q  123 cttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctc 222  Q
    |||||||||||| || |||||||| |||||||||||||||||||||||||||||  ||||||| ||||||| ||||||||||||| | || |||||||||    
T  11899 cttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcctcctc 11800  T
Q  223 tcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataat 322  Q
    |||||||||||||||||| | || ||||||||||| ||||| || || ||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  11799 tcatcattaagtctctgctttcctttgtcagcaggagcactatatggtttaggacgactctgctgtcccttacctcttctctcactcatcaccttataat 11700  T
Q  323 gagc 326  Q
    ||||    
T  11699 gagc 11696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 2067 - 1739
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||| ||||| ||||||||||| || || || |||||||| || || ||||| || || ||||| |||||||||||   ||| |    
T  2067 ctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtc 1968  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||||||||| ||||||||  | ||||| || |||||||||||    
T  1967 ctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatttcagcaggagc 1868  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    |||| || | || ||||||||||||||||| || |||||  | || ||||||||||| ||||| || || |||||| |||| |||||||||||||||||     
T  1867 atctatcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcaggagcactatatggtttaggatgactctgctgtcccttacctctg 1768  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  1767 cgctcactcatcaccttgtaatgagcttt 1739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 70582 - 70767
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| || |||||||| || || ||||| ||||| |||| ||| ||||||||||| ||||| ||||  ||||| || ||||| || ||||| |    
T  70582 cactgtgaactaatgtggccctcctcattacagttataacaaacaatatctccacgcttgcattcagccaacacatgacctttatgaccgcatctgaaac 70681  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctc 207  Q
    ||||||||||||| ||||| || || |||| ||||||||||||| | ||||||||  ||||||| |  ||| ||||||||||||||    
T  70682 acttcttctcatctttggtgcagacattacccttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctc 70767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 8577 - 8242
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |  | ||||| |||||||||||||||| ||| |||||||| ||||| ||||| ||||||||||||||||||||||    ||| |    
T  8577 ctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtc 8478  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||| || ||| || ||||    
T  8477 ccttctgaccacacctgaaacacttcttctcatccttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagc 8378  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || || |||||||||||||| || |||||| | |||||||||||||| ||||| |||||||| |||||||| || |||||||| || ||     
T  8377 atctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcccctg 8278  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    || |||||||||||||| ||||||||||| ||||||    
T  8277 cggtcactcatcaccttgtaatgagctttcatgtcc 8242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 18791 - 18456
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |  | ||||| |||||||||||||||| ||| |||||||| ||||| ||||| ||||||||||||||||||||||    ||| |    
T  18791 ctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtc 18692  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||| || ||| || ||||    
T  18691 ccttctgaccacacctgaaacacttcttctcatccttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagc 18592  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || || |||||||||||||| || |||||| | |||||||||||||| ||||| |||||||| |||||||| || |||||||| || ||     
T  18591 atctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcccctg 18492  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    || |||||||||||||| ||||||||||| ||||||    
T  18491 cggtcactcatcaccttgtaatgagctttcatgtcc 18456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 19438026 - 19438324
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    ||| |    
T  19438026 ctaaccttcttcggctgtgtgcactgcgaactgatatggcgctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctagagtgtgtc 19438125  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| ||||| |||||||| || |||||||| ||||||  |||||||||||| ||||||||  ||| ||| ||||||||||||||    
T  19438126 ctttctgaccacacctgaaacacttattctcatctttagtacaaacattactcaagtggcctttctcaccacacttgtaacgaacgatctcagcaggagc 19438225  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    ||||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| || ||||| |||||||| |||||||||||||||||    
T  19438226 atctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatatggcttcggacgactctgctgtcccttacctct 19438324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 14377173 - 14376845
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| |||| || || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||| |||| ||||||   ||| |    
T  14377173 ctaaccttcttcggctgtgtacattgcgaactgatgtggccctcttcattgcagttataacaaacaacatcaccacgcttacaattagctaaagtgtgtc 14377074  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| || |||||  | ||||| |  ||| |||||||    
T  14377073 ctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcaccgcacttgtagcaaacaacatcaacaggagc 14376974  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |||| || |||||||||||||| |  |||||  | |||||||||||||| ||||| |||||||| |||||||| ||||||||||| |  |||    
T  14376973 atctctcctattgggtctcctctcatcattcaacctctgttttcccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgctcctt 14376874  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  14376873 cgatcactcatcaccttgtaatgagcttt 14376845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 21567248 - 21566920
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||| |||||| ||| | || ||||| |||||||| |||||||| |  |  || || ||||| ||||||||||| | |||||| | ||| ||   ||| |    
T  21567248 ctaatcttctttggctgagtgcactgggaactgatgtggccctccttatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtc 21567149  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||    
T  21567148 ctttctgaccacacctgaagcacttcttctcatctttagtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagc 21567049  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||| ||||||||||| ||||  ||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||  ||     
T  21567048 atctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttgtcccttactcctc 21566949  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  21566948 cgctcactcatcaccttgtaatgagcttt 21566920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 18797714 - 18798041
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||  | || |||||||||||||||||||| || || |||||||| || || ||||| ||||||||||||||||||||||    ||| |    
T  18797714 ctaaccttctttggttgagtgcactgtgaactgatatggccttcatcattgcagttatagcaaacaacgtcaccacgcttgcaatcagctagagtgtgtc 18797813  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||||||||||||||| || |||| |||||| || || ||||| |||||||||||||||||||||||||||||| ||||||| || ||  |||||||    
T  18797814 ccttctgaccacacctgaaacatttctgctcatctttagtgcaaacattactcttgtggcctttctcgccacacttataacaaacaatatccacaggagc 18797913  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||| ||| | || ||||||||||||||||| | ||| ||| | |||||||||||||| ||||| |||||||| |||||||| ||||||||||| |||||     
T  18797914 atccctcctcttgggcctcctctcatcattcaatctttgctttcccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctg 18798013  T
Q  301 cgctcactcatcaccttataatgagctt 328  Q
    || |||||||||||||| ||||||||||    
T  18798014 cggtcactcatcaccttgtaatgagctt 18798041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 34642843 - 34642517
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  | || ||||| ||||||||||| |||||  | ||||||||||| ||||||| ||||||||| || ||||||||||||| |||||    
T  34642843 ctaaccttcttcggttgagtgcactgagaactgatatgaccctccccattgcagttgtagcatacaatatcaccacgtttacaatcagctaacacgtgac 34642744  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| |||||||     
T  34642743 ccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcccttctcgccacacttaaagcaaactatctccgcaggagt 34642644  T
Q  201 atctc-tcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
     |||| ||   |  || ||||| |||||||| ||||  ||| | |||||  ||||||| ||||| ||||||||||||||||| || |||||||| || ||    
T  34642643 gtctcttcccttggggtctcctttcatcattcagtcgttgctttcccttaccagcaggagcactatacggcttaggacgactctgttgtcccttgcccct 34642544  T
Q  300 tcgctcactcatcaccttataatgagc 326  Q
     || |||||||||||||| ||||||||    
T  34642543 ccgttcactcatcaccttgtaatgagc 34642517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 22 - 329
Target Start/End: Complemental strand, 24515650 - 24515343
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||| |||||||| || || || || |||||||| ||||| |||||||| || | ||| ||||||||||    ||| |  ||||||||||||||||| |    
T  24515650 cactgcgaactgatgtgaccttcctcattgcagttataacaaacaacatctcccctcttccaatcagctagtgtgtgtcttttctgaccacacctgaaac 24515551  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||||||||||| || |||||||| |||||||||||||||||||| ||||||||| ||||||| || ||| |||||||||||||| | || ||||||||    
T  24515550 acttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttataacaaacaatatcaacaggagcatctctcctcttgggcctcct 24515451  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
    ||||||||| || |||||  | |||||||||||||| ||||| || || ||||||||||| || |||||||| ||||| || |||||||||||||| |||    
T  24515450 ctcatcattcagcctctgttttcccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttgcctctgcggtcactcatcaccttgtaa 24515351  T
Q  322 tgagcttt 329  Q
    ||||||||    
T  24515350 tgagcttt 24515343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 329
Target Start/End: Complemental strand, 10466102 - 10465777
Alignment:
Q  4 accttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccct 103  Q
    |||||||||||| | || ||||||||||| ||||| || ||||| |||||||| || || ||||  || |||||||| || |||||||    ||| ||||    
T  10466102 accttcttcggctgagtacactgtgaactaatatgaccttcttcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtccct 10466003  T
Q  104 tctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||||||| || || ||| |||||||  |   |||| | || |||||||||||||| || ||||||||  |||| || |||||||||||| ||||    
T  10466002 tctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatc 10465903  T
Q  204 tctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgc 303  Q
    |||| | || |||||||| |||||||| | | ||||| | |||||||||||| | ||| |||| |||||||||||||| |||||||||||||| || | |    
T  10465902 tctcctcttgggcctcctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttaggacgactctgctgtcccttacccctcctc 10465803  T
Q  304 tcactcatcaccttataatgagcttt 329  Q
    |||||||||||||| |||||||||||    
T  10465802 tcactcatcaccttgtaatgagcttt 10465777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 24367445 - 24367758
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| ||||| || ||| | ||||| |||||||| ||||  || || |||||||| ||||||||   ||||||||||||||||||||||||||    
T  24367445 cactgtgaactaatatgaccttctccattgcaattgtaacagacaatgtccccccgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 24367544  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| || ||||||||||| | || ||||||||    
T  24367545 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacatgagcatctctcctcttgggcctcct 24367644  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | |||||||||||||| || | ||||||||| | ||| |||    
T  24367645 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaa 24367744  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  24367745 tgagctttggtgtc 24367758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 152 - 329
Target Start/End: Original strand, 25771019 - 25771196
Alignment:
Q  152 tcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtc 251  Q
    ||||||||||||| || |||||||| ||||| || ||||||| ||||||||||||| | || ||||||||||||||||| || |||||  |||| |||||    
T  25771019 tcttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtc 25771118  T
Q  252 agcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    |||||| ||||| ||||| |  |||||||| || |||||||||||||| ||||||||||||||  |||||||||||||    
T  25771119 agcaggagcactatacggttacggacgactctgttgtcccttacctctgcgctcactcatcactctataatgagcttt 25771196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 281
Target Start/End: Original strand, 21474645 - 21474904
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||| ||||| ||||| |||||||| |  || ||||| || |||| ||||||||||||||| ||||| ||   ||| || ||||  ||||| | ||| |    
T  21474645 cactgagaactaatatgaccctcttcatcacaattgtagcacacaatatcaccacgcttgcactcagccaatgtgtgtcctttcttcccacatcggaaac 21474744  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    |||||||||||||   |  ||| || ||||||||||||||||| || |||||||| |||||||| ||||||| ||||||||||||| |  | ||||||||    
T  21474745 acttcttctcatcacggtcacatacattactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctcct 21474844  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgact 281  Q
    ||||||||| ||  ||||| |||||||||||||||| ||||| |||||||| ||||||||    
T  21474845 ctcatcattcagcatctgcttacccttgtcagcaggagcactatacggcttcggacgact 21474904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 28 - 326
Target Start/End: Original strand, 19456074 - 19456372
Alignment:
Q  28 gaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttct 127  Q
    ||||| ||||| || || ||||||||||| || || ||||  || |||||||| |||||| |||    ||| || |||||||  ||||||||||||||||    
T  19456074 gaactaatatgaccttcctcgttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttct 19456173  T
Q  128 tctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatc 227  Q
    |||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| ||||||| ||||| ||||||| | || ||||||||||||||    
T  19456174 tctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatc 19456273  T
Q  228 attaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    ||| || || ||  | || ||||||||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||| || ||| ||||||||    
T  19456274 attcagcctttgttttcctttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgttcactcaccagcttgtaatgagc 19456372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 28 - 326
Target Start/End: Original strand, 19466219 - 19466517
Alignment:
Q  28 gaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttct 127  Q
    ||||| ||||| || || ||||||||||| || || ||||  || |||||||| |||||| |||    ||| || |||||||  ||||||||||||||||    
T  19466219 gaactaatatgaccttcctcgttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttct 19466318  T
Q  128 tctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatc 227  Q
    |||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| ||||||| ||||| ||||||| | || ||||||||||||||    
T  19466319 tctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatc 19466418  T
Q  228 attaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    ||| || || ||  | || ||||||||||| ||||| || || ||||||||||| || |||||||||||||| || ||||||| || ||| ||||||||    
T  19466419 attcagcctttgttttcctttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgttcactcaccagcttgtaatgagc 19466517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 326
Target Start/End: Original strand, 19881588 - 19881745
Alignment:
Q  169 ccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacg 268  Q
    ||||||||||| |||||||||||||||||||  |||||    || || || ||||||||||| ||||  ||| | |||||  |||||||||| |||||||    
T  19881588 ccacacttaaagcaaactatctcagcaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttaccagcaggggcgctgtacg 19881687  T
Q  269 gcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    |||||||||||||||| ||| |||| || || || |||||||||||||| ||||||||    
T  19881688 gcttaggacgactttgttgttccttgcccctccgttcactcatcaccttgtaatgagc 19881745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 117 - 330
Target Start/End: Complemental strand, 19486435 - 19486222
Alignment:
Q  117 gaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggc 216  Q
    ||||||||||||||||||     | ||||| |||||||||||||| ||||| ||||||||  | ||||| ||||||| |||| |||||||  | || ||     
T  19486435 gaagcacttcttctcatcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggt 19486336  T
Q  217 ctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcacct 316  Q
    |||||||||||||| | ||| ||| | || ||||||||||| |||||||| ||||| | ||||| |||||| || ||    || ||||||||||| ||||    
T  19486335 ctcctctcatcattcaatctttgcttccctttgtcagcaggagcactgtagggcttcgaacgaccttgctggcctttgttcctccgctcactcataacct 19486236  T
Q  317 tataatgagctttg 330  Q
    | ||||||||||||    
T  19486235 tgtaatgagctttg 19486222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 287
Target Start/End: Original strand, 23081594 - 23081733
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || ||||||| |||||| ||||||||||| || |  | |||| |||||||||||||| ||| ||| | || |    
T  23081594 ttactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgctttcctt 23081693  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||  |||||||| ||||| |||||||| |||||    
T  23081694 tatcagcagcagcactgtaaggctttggacgactctgctg 23081733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 16813805 - 16813902
Alignment:
Q  142 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctg 239  Q
    ||||| |||||||||||||||||||| ||||||||  | ||||| |||||||||||| |||||||| | || || |||||||||||||| | ||||||    
T  16813805 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcattcaatctctg 16813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 8720821 - 8720733
Alignment:
Q  142 caaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcatt 230  Q
    ||||| |||||||||||||||||||| ||||||||  | ||||| |||||| ||||| |||||||| | || |||||||||||||||||    
T  8720821 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcatt 8720733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 329
Target Start/End: Original strand, 18660161 - 18660271
Alignment:
Q  219 cctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcacctta 318  Q
    ||||||||||||||  ||||||  |||||| |||||||| |||||||| ||||| |||||||||||||| | ||||||| | | ||||||||   ||||     
T  18660161 cctctcatcattaaccctctgctcacccttatcagcaggagcactgtaaggctttggacgactttgctgactcttacctttcctctcactcacagccttg 18660260  T
Q  319 taatgagcttt 329  Q
    |||||||||||    
T  18660261 taatgagcttt 18660271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 28312892 - 28312946
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  28312892 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacc 28312946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 329
Target Start/End: Original strand, 15462435 - 15462688
Alignment:
Q  76 cgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacact 175  Q
    |||||||| ||||| ||||  ||||| |||||||| || ||||| || |||||||||||  |||| || || |||||||||||||||||| | |||||||    
T  15462435 cgcttgcactcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctctggtgcagacattactcttgtggcctttcgcaccacact 15462534  T
Q  176 taaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagg 275  Q
    |  |||| || |  ||| ||||||  ||||||    | |||  |||||||||||| | ||||||  | || |||| |||||| |||||||| ||||| ||    
T  15462535 tgtaacacacaacatcaacaggagtctctctccctctaggctgcctctcatcattcaatctctgtttgcctttgttagcaggagcactgtagggcttcgg 15462634  T
Q  276 acgactttgctgtccctta--cctcttcgctcactcatcaccttataatgagcttt 329  Q
     |||||   ||| ||||||  ||||||  ||||||||||||||| |||||||||||    
T  15462635 gcgactactctgacccttattcctctt--ctcactcatcaccttgtaatgagcttt 15462688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 141 - 330
Target Start/End: Complemental strand, 30678141 - 30677952
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||  ||||| ||||||||  | ||||| | ||||||||||| |||| || |  | ||||||||||||||||| |  || |||    
T  30678141 acaaacattactcttgtggctcttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgc 30678042  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
     |||  || |||||||| ||  |||| ||||| |||||| | ||||| | |||||| || ||||||||||| ||||| |||| |||||||    
T  30678041 ttacatttatcagcaggagcgttgtaaggctttggacgattctgctgactcttacccctccgctcactcataaccttgtaattagctttg 30677952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 25115822 - 25115865
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  25115822 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 25115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Original strand, 16575157 - 16575203
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16575157 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16575203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 16620223 - 16620177
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  16620223 ttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16620177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 27559150 - 27559029
Alignment:
Q  77 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 176  Q
    ||||||| ||||||||   |||||||||||  ||||||| ||| ||||||||| | ||||  | ||||||  ||||||||||||||||||| ||||| ||    
T  27559150 gcttgcagtcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaatt 27559051  T
Q  177 aaaacaaactatctcagcagga 198  Q
     ||||||   ||||||||||||    
T  27559050 gaaacaagtaatctcagcagga 27559029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 28260211 - 28260162
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  28260211 ttgtcagcgggggcactgtacggcttaggacgactctgctgccccttacc 28260162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 28285705 - 28285754
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  28285705 ttgtcagcgggggcactgtacggcttaggacgactctgctgccccttacc 28285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 28338960 - 28338911
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    |||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  28338960 ttgtcagcgggggcactgtacggcttaggacgactctgctgccccttacc 28338911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 20010687 - 20010599
Alignment:
Q  73 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcc 161  Q
    ||||||||||| ||||| ||||  |||||||||||||| || ||||| || ||||||||||| | ||| ||| | ||||||||||||||    
T  20010687 ccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcc 20010599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 22829397 - 22829354
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  22829397 tcagcaggggcactgtacggcttaggacgactctgttgtccctt 22829354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 24292793 - 24292750
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  24292793 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 24292750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 29589453 - 29589407
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||    
T  29589453 ttgtcagtgggggcactgtacggcttaggacgactctgctgtccctt 29589407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 27205901 - 27205938
Alignment:
Q  259 gcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27205901 gcactgtacggcttaggacgactctgctgtcccttacc 27205938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 27243327 - 27243290
Alignment:
Q  259 gcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27243327 gcactgtacggcttaggacgactctgctgtcccttacc 27243290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 2871813 - 2871770
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||| ||||||||||||| || ||||||||    
T  2871813 tcagcaggggcactgtacagcttaggacgactctgttgtccctt 2871770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 5836239 - 5836196
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||| ||||||||||||||||| || ||||||||    
T  5836239 tcagcaggggcactatacggcttaggacgactctgttgtccctt 5836196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 292
Target Start/End: Original strand, 21764976 - 21765127
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||  || | || |||| ||| |||||    | |||||      
T  21764976 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctaa 21765075  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccct 292  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||| ||||    
T  21765076 ttgcccttatcagcaggggcactatagggcttagggcgactctgctggccct 21765127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 25756720 - 25756670
Alignment:
Q  153 cttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||||||||| ||||| |||||||| || ||||| |||||||||||    
T  25756720 cttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcatc 25756670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 329
Target Start/End: Original strand, 21474908 - 21474936
Alignment:
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    |||||||||||||||||||||||||||||    
T  21474908 cgctcactcatcaccttataatgagcttt 21474936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 22437043 - 22437095
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||    
T  22437043 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatc 22437095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 25958863 - 25958724
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||| ||||||||||||  |||||| |  | ||||| ||||||| ||||||||||||  | || || |||||||||||||  ||||| || || ||||    
T  25958863 ttactcctgtggcctttcttaccacacctgtagcaaacaatctcagtaggagcatctctactcttaggtctcctctcatcatccagtctttg-ctcccct 25958765  T
Q  248 t-gtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||| || | ||||| || ||||| ||||||||||||||    
T  25958764 tcgtcaacaagagcactataaggctttggacgactttgctg 25958724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 156; Significance: 8e-83; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 22 - 329
Target Start/End: Original strand, 15282 - 15589
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||    ||| |  |||||||||||||||||||    
T  15282 cactgtgaactgatatggccctcttcattgcagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcatttctgaccacacctgaagc 15381  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| | || |  ||||||||||||||||||||| |||| ||||||||    
T  15382 acttcttctcgtccttagtacaaacattactcttgtggcctttctcgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcctcct 15481  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
    ||||||||| |  |||||| | | |||||||||||| ||||| |||||||| |||||||| || ||||| || |   |||| |||||||||||||| |||    
T  15482 ctcatcatttaacctctgctttcgcttgtcagcaggagcactatacggcttcggacgactctgttgtcctttgctcattcgatcactcatcaccttgtaa 15581  T
Q  322 tgagcttt 329  Q
    ||||||||    
T  15582 tgagcttt 15589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 153; Significance: 5e-81; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 53 - 329
Target Start/End: Original strand, 7279 - 7555
Alignment:
Q  53 agttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttact 152  Q
    |||| ||||| ||||||||||||||||||||||||||||    ||| || |||||||||||||||||||||||||||||||| || |||||||| |||||    
T  7279 agttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattact 7378  T
Q  153 cttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtca 252  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||| |||| ||||||||||||||||| |  |||||| |||||||||||    
T  7379 cttgtggcctttctcgccacacttgtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaacctctgcttacccttgtca 7478  T
Q  253 gcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
     |||| ||||| |||||||| |||||||| |||||||| || |  ||||| |||||||||||||| |||||||||||    
T  7479 acaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttgtaatgagcttt 7555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 54236 - 54571
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||| |||||  |||| ||| |||| |||||||| |||||||| |||||||| ||||| |||||||||||||||||||||| |||||    ||| |    
T  54236 ctaacctttttcggttgtgtgcaccgtgagctgatatgaccctcttcattgcagttataacaaacaacatcaccacgcttgcaataagctagagtgtgtc 54335  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||| ||||    
T  54336 ccttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaagagc 54435  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    || ||   |||| ||||||||||||||||| |  |||||| | || ||||||||||| ||||| |||||||| |||||||| || ||||| || |  |||    
T  54436 atttcatctattgggcctcctctcatcattcaacctctgcttccctttgtcagcaggagcactatacggctttggacgactctgatgtcctttgctcctt 54535  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    || |||||||||||||||||||||||||| ||||||    
T  54536 cgatcactcatcaccttataatgagctttcatgtcc 54571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 100 - 336
Target Start/End: Complemental strand, 1246 - 1010
Alignment:
Q  100 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||| ||    
T  1246 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcatactatctcagcagaag 1147  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    || |  || || ||||||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||| ||||||||| | || ||||||||||||||    
T  1146 cacccttcttactcggcctcctctcatcattaagtctctgcttacccttatcagccggggcactatacggtttaggacgattctgatgtcccttacctct 1047  T
Q  300 tcgctcactcatcaccttataatgagctttgatgtcc 336  Q
    |||||||||| |||||||||||||||||||| |||||    
T  1046 tcgctcactcttcaccttataatgagctttggtgtcc 1010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 325
Target Start/End: Original strand, 8803 - 9127
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  | || ||||| |||||||||||||| ||||||||||||||||| || ||||  ||||||||||||||||||||||    ||| |    
T  8803 ctaaccttcttcggttgagtgcactgcgaactgatatggccttcttcgttgcagttgtagcaaacaatgtcaccacgcttgcaatcagctagagtgtgtc 8902  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||| ||||||||||||||| ||||||| |||||| |||||||    
T  8903 ctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatctcatcaggagc 9002  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || || || ||||||||||| ||  ||||| | || ||||||||||| ||||| |||||||| |||||||| |||||||| || |  |||    
T  9003 atctctcctcttgggtcttctctcatcattcagcttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctcctt 9102  T
Q  301 cgctcactcatcaccttataatgag 325  Q
    || ||||||||||||| ||||||||    
T  9103 cgatcactcatcacctaataatgag 9127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 141; Significance: 7e-74; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 1963 - 1635
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||| |||||| ||| | || ||||| |||||||| |||||||| || |  || || ||||| ||||||||||| | |||||| | ||| ||   ||| |    
T  1963 ctaatcttctttggctgagtgcactgggaactgatgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtc 1864  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| | |||| ||| ||||||| |||    
T  1863 ctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaattatttcagcagtagc 1764  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||| ||||||||||| ||||  ||| | |||||||||||||||||||||||||||||||||||||| || | ||||||||| ||     
T  1763 atctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttttcccttacccctc 1664  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  1663 cgctcactcatcaccttgtaatgagcttt 1635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 141; Significance: 7e-74; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 660 - 332
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||| |||||| ||| | || |||||||||||||| |||||||| || |  || || ||||| |||||||||   | |||||| | ||| ||   ||| |    
T  660 ctaatcttctttggctgagtgcactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcattcctcttgcagttagccaatgtgtgtc 561  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  560 ctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagtaggagc 461  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || || || ||||||||||| || |  ||| | |||||||||||||||| ||||||||||||||||||||| || ||||||||||| ||     
T  460 atctctcctcttgggtcttctctcatcattcagccgttgctttcccttgtcagcagggggactgtacggcttaggacgactctgttgtcccttacccctc 361  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  360 cgctcactcatcaccttgtaatgagcttt 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 141; Significance: 7e-74; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 37128 - 37456
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| | || ||||||||||||||||| || || || |||||||| || || |||| ||| |||| ||| ||||||||||    ||| |    
T  37128 ctaaccttcttcggctgcgtacactgtgaactgatatgaccttcctcattgcagttatagcaaacaatatccccacacttacaatcagctagtgtgtgtc 37227  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||||||||||| ||   |||||| ||||||||||||||||||||||||||||| || ||||  || |||| |||||     
T  37228 ccttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcgccacacttgaagcaaaaaatatcagtaggagt 37327  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
     |||||| | || ||||||||||||||||| | ||||||| |||||||||| ||| | ||||| |||||||| |||||||| |||||||||||||||||     
T  37328 gtctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcggcaagagcactatacggcttcggacgactctgctgtcccttacctcta 37427  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  37428 cgttcactcatcaccttgtaatgagcttt 37456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 141; Significance: 7e-74; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 39448 - 39120
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||||   |||| ||||| ||||||||| | || || || |||||||| || || |||||||| || ||||| |||| ||||||   ||| |    
T  39448 ctaaccttcttcgattgtgtacactgcgaactgatacgaccttcctcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtc 39349  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||| ||   |||||| |||||||||||||||||||| ||||||||  | ||||| ||||||||||||||    
T  39348 ctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggagc 39249  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| || |||||| | |||||||||||||| ||||| || || |||||| |||| ||||||||||||||||||    
T  39248 atctctcctcttgggcctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatatggtttaggaagactctgctgtcccttacctctt 39149  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  39148 cgttcactcatcaccttgtaatgagcttt 39120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 293
Target Start/End: Original strand, 14753 - 14905
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||  || | || |||| | | |||||    | ||||||     
T  14753 acaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggagcatccttcttcttaggccgcatatcatcgaccattctctgt 14852  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||| |||||    
T  14853 ttgcccttatcagcaggggcactataaggcttagggcgactctgctggccctt 14905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 180896 - 180753
Alignment:
Q  59 aacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtg 158  Q
    |||| |||| ||| ||||||||||||||||| ||||  |||||||||||||| || ||||| || ||||||||||| |  || ||| | |||||||||||    
T  180896 aacaaacaatatctccacgcttgcaatcagccaacacatgacccttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtg 180797  T
Q  159 gcctttctcgccacacttaaaacaaactatctcagcaggagcat 202  Q
    ||| ||| | ||||| ||  ||||||| | |||| |||||||||    
T  180796 gcccttcacaccacatttgtaacaaacaacctcaacaggagcat 180753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 326
Target Start/End: Original strand, 5251 - 5429
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| ||||||||||| |||||  |  | ||||| |||||||||  | ||||| || |  | |||||| |||||||||||| ||| ||  | ||||    
T  5251 ttactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacaacatctttctttctaggcctcatctcatcattaactctttgtttgccct 5350  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    | |||||||| |||| ||| ||||| |||||||||||||| ||||| ||| | | |||| |||  ||||| ||||||||    
T  5351 tatcagcaggagcaccgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatgagc 5429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 4e-72; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 21742736 - 21742408
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || ||||| ||||| ||||| || || || || |||||||| || |||||||| ||||||||||||||||| ||   ||| |    
T  21742736 ctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaacatccccacgcttgcaatcagccaatgtgtgtc 21742637  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    | |||||||||||||| ||||||||||||||||| | ||| ||| || |||||||||||||||||||| |||||||| || ||||  ||||||| |||||    
T  21742636 ctttctgaccacacctaaagcacttcttctcatc-tcggtcacatacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggag 21742538  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    |||||||| | || ||||||||||||||||| ||||||||| |||||||||||| ||| ||||| ||||| || |||||||| | |||||||||||||||    
T  21742537 catctctcctcttaggcctcctctcatcattcagtctctgcttacccttgtcagtaggagcactatacggtttcggacgactctactgtcccttacctct 21742438  T
Q  300 tcgctcactcatcaccttataatgagcttt 329  Q
     ||||||||||||||||| |||||||||||    
T  21742437 gcgctcactcatcaccttgtaatgagcttt 21742408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 22015929 - 22015601
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| | || |||||  |||| |||||  | || ||||||||||| ||||| |||||||| ||||||||||||||||||||   ||| |    
T  22015929 ctaaccttcttcggctgcgtacactgcaaactaatatgatcttcctcgttgcagttataacaaacaacatccccacgcttgcaatcagctaaagtgtgtc 22015830  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||||||||||||||||||  |   |||||| ||||| || |||||||| || |||||||| || ||||| || |  | ||||||    
T  22015829 ctttctgaccacacctgaagcacttcttctcatctctatcacaaacattacttttttggcctttttctccacacttgaatcaaacaatatttgtaggagc 22015730  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| | ||||| | |||||||||||||||| ||||| |||||||| |||||||| ||||||||||| || ||     
T  22015729 atctctcttctttggcctcctctcatcatttattctcttcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtccctttccccta 22015630  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  22015629 cgctcactcatcaccttgtaatgagcttt 22015601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 20833084 - 20832757
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||| ||||  | || ||||| |||||||| || || || || |||||||| ||||| |||||||| || | ||||||||||||||    ||| |    
T  20833084 ctaaccttcctcggttgcgtacactgcgaactgatgtgaccttcctcattgcagttataacaaacaacatctcccctcttgcaatcagctagtgtgtgtc 20832985  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||| || ||||||||||| || |||||||| |||||||||||||||||||||||||||||  | ||||| || ||| |||||||    
T  20832984 ctttctgaccacacctgaaacaattcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtagcaaacaatatcaacaggagc 20832885  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || || |||||||||||||| || |||||| | |||||||||||||| ||||| ||  | ||||||||||| ||||||||||| |||||     
T  20832884 atctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactata-tgtttaggacgactctgctgtcccttgcctcta 20832786  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  20832785 cggtcactcatcaccttgtaatgagcttt 20832757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 5 - 335
Target Start/End: Complemental strand, 24096795 - 24096465
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||||||| | || ||||||||||||||||| || ||||||||||||||||| || ||||  || |||||||| || |||||||    ||| || ||    
T  24096795 ccttcttcggctgagtacactgtgaactgatatgaccttcttcgttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtccttt 24096696  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatct 204  Q
    |||||||||||| || |||||| |||||||  |   |||| | ||||||||||||||||| || |||||||| |||||||| |||||| |||||||||||    
T  24096695 ctgaccacacctaaaacacttcctctcatctctaccacaagcattactcttgtggcctttttcaccacacttgaaacaaacaatctcaacaggagcatct 24096596  T
Q  205 ctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgct 304  Q
    ||| | || ||||||||||||||||| |  |||||  | || ||||||||||| ||||| || || ||||||||||| || |||||||||| ||||||||    
T  24096595 ctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcagcaggagcactataaggtttaggacgactctgttgtcccttacttcttcgct 24096496  T
Q  305 cactcatcaccttataatgagctttgatgtc 335  Q
    ||||| ||||||| |||||||||||| ||||    
T  24096495 cactcgtcaccttgtaatgagctttggtgtc 24096465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 21739220 - 21738892
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| |||   || ||||| ||||||||||| || ||||| ||  ||||||| || | |||||| |||||||| |||||| ||||   ||| |    
T  21739220 ctaaccttcttaggctccgtacactgcgaactgatatgaccttcttcattatagttgtagcaaaaaacatccccacgcttacaatcaactaaggtgtgtc 21739121  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    | |||||||||||||| ||||||||||||||||| | | | |||||| |||||||||||||||||||| |||||||| || ||||  ||||||| |||||    
T  21739120 ctttctgaccacacctaaagcacttcttctcatc-tcgatcacaaacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggag 21739022  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    || ||||| | || ||||||||||||||||| | ||||||| |||||||||||||| |||| || || ||||| |||||||| || ||||||||||||||    
T  21739021 cacctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcatgggcgctatatggcttcggacgactctgttgtcccttacctct 21738922  T
Q  300 tcgctcactcatcaccttataatgagcttt 329  Q
     || |||||||||||||| |||||||||||    
T  21738921 gcggtcactcatcaccttgtaatgagcttt 21738892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 21961233 - 21961567
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||||||   |  ||||| ||||||||||| |||||| | ||||||||||| || |||| ||| |||||||| || ||||||||   ||| |    
T  21961233 ctaaccttcttcggctcagggcactgcgaactgatatgaccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaactgtgtc 21961332  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||| ||||||| ||   |||||| || |||||||||||||| || ||||||||  ||||||| ||||||| ||||||    
T  21961333 ccttctgaccacacctgaagcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagc 21961432  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || || ||||| |||||||| |   ||||| | || ||||||| ||| |||||||| |||||||||||| | |||||||||||||||||     
T  21961433 atctctcctcttgggtctcctatcatcattcatcttctgctttcctttgtcagaaggagcactgtaaggcttaggacgattctgctgtcccttacctctc 21961532  T
Q  301 cgctcactcatcaccttataatgagctttgatgtc 335  Q
    | ||||||||| | ||| |||||||||||| ||||    
T  21961533 ctctcactcattatcttgtaatgagctttggtgtc 21961567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 25 - 311
Target Start/End: Original strand, 52988971 - 52989257
Alignment:
Q  25 tgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcact 124  Q
    |||||||||||||| |||||| | ||||||||||| || ||||  || |||||||| || ||||||||   |||||||||||||||||||||||| ||||    
T  52988971 tgtgaactgatatgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccacacctgaaacact 52989070  T
Q  125 tcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctc 224  Q
    || ||||||| ||   |||||| || |||||||||||||| || ||||||||  ||||||| ||||||| ||||||||||||| | || |||||||| ||    
T  52989071 tcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatc 52989170  T
Q  225 atcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcat 311  Q
    |||||| |   ||||| | || ||||||||||| |||||||| |||||||||||| |||||||||||||||| || | |||||||||    
T  52989171 atcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattttgctgtcccttacccctcctctcactcat 52989257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 31537160 - 31536847
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| |||||||| ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  31537160 cactgtgaactaatatggccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 31537061  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    | ||  | |||||  |   |||||| || ||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||||| | || || |||||    
T  31537060 attttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcct 31536961  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     |||||||| |  |||||| | || ||||||||||| ||||| || |||||||||||| | |||||||||||||| || | ||||||||| | ||| |||    
T  31536960 atcatcattcatcctctgctttcctttgtcagcaggagcactataaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaa 31536861  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  31536860 tgagctttggtgtc 31536847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 20074893 - 20074559
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||||||   |  ||||| ||| ||||||| |||||| | ||||||||||| || |||| ||| ||||||||||| ||||| ||   |||||    
T  20074893 ctaaccttcttcggctcaggacactgcgaattgatatgaccctctccattgcagttgtagcagacaatatccccacgcttgcattcagccaagctgtgac 20074794  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||| ||||||| ||  ||||||| || ||||||||||||||||| ||||||||  |||| || |||||||  |||||    
T  20074793 ccttctgaccacacctgaagcacttcctctcatctttactacaaacattgctcttgtggcctttctcaccacacttgtaacacacaatctcagtgggagc 20074694  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | ||  ||||||| |||||| | |   ||||| | || ||||||||||  |||||||| |||||||||||| | |||||||||||||| ||     
T  20074693 atctctcctcttaagcctcctgtcatcactcatcttctgctttcctttgtcagcagaagcactgtaaggcttaggacgattctgctgtcccttacccctc 20074594  T
Q  301 cgctcactcatcaccttataatgagctttgatgtc 335  Q
    | ||||||||| | ||| |||||||||||| ||||    
T  20074593 ctctcactcattatcttgtaatgagctttggtgtc 20074559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 48426100 - 48426413
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  48426100 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 48426199  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  48426200 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 48426299  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | ||| |||    
T  48426300 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatcttgtaa 48426399  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  48426400 tgagctttggtgtc 48426413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 38909989 - 38909676
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  38909989 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 38909890  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  38909889 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 38909790  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |  |||||| | || ||||||||||| |||||||| || ||||||||| | || ||||||||||| || | | ||||||| | ||| |||    
T  38909789 atcatcacccatcctctgctttcctttgtcagcaggagcactgtaaggtttaggacgattctgttgtcccttacccctcctcccactcattatcttgtaa 38909690  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  38909689 tgagctttggtgtc 38909676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 2 - 326
Target Start/End: Original strand, 19857481 - 19857805
Alignment:
Q  2 taaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacc 101  Q
    |||||||||||||  | || ||||| ||||| ||||| || || || ||| |||| ||||| ||||  || || ||||| ||||||||||    ||| ||    
T  19857481 taaccttcttcggttgagtacactgcgaactaatatgaccttcctcattgtagttataacaaacaatgtctccccgcttacaatcagctagtgtgtgtcc 19857580  T
Q  102 cttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagca 201  Q
     |||||||||||||||||||| |||||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| ||||| | || ||||    
T  19857581 tttctgaccacacctgaagcatttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcggtagaagca 19857680  T
Q  202 tctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttc 301  Q
    |||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||||| || || ||||||||||| || |||||||||||||| |    
T  19857681 tctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgc 19857780  T
Q  302 gctcactcatcaccttataatgagc 326  Q
    | |||||||||||||| ||||||||    
T  19857781 gttcactcatcaccttgtaatgagc 19857805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 20297610 - 20297923
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    |||| |||||| ||||| || ||| | ||||||||||| || ||||  || ||||||||||| |||||||    ||||||||||| ||||||||||||||    
T  20297610 cactatgaactaatatgaccttctccattgcagttgtagcagacaatgtccccacgcttgcattcagctaggctgtgacccttctaaccacacctgaagc 20297709  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| ||||||| ||   |||||| ||||||||||||| |||||| ||||||||  ||||||| ||||||||||||||||||||| | || ||||||||    
T  20297710 acttcctctcatctttaccacaaacattactcttgtggcatttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcct 20297809  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||  | |||||||||| ||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | ||| |||    
T  20297810 gtcatcacccatcttctgttttcccttgtcagtaggagcactgtaaggcttaggacgattctgatgtcccttacccctcctctcactcattatcttgtaa 20297909  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  20297910 tgagctttggtgtc 20297923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 37680276 - 37680589
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| ||||| || ||| | ||||| |||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  37680276 cactgtgaactaatatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 37680375  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||| ||||||| | || ||||||||    
T  37680376 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagtatctctcctcttgggcctcct 37680475  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||| ||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | ||| |||    
T  37680476 atcatcacccatcttctgctttcctttgtcagtaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatcttgtaa 37680575  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  37680576 tgagctttggtgtc 37680589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 139 - 326
Target Start/End: Original strand, 16379407 - 16379594
Alignment:
Q  139 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 238  Q
    |||||||| ||||| |||||||||||||| |||||   | | ||||| |||||||||  | ||||| || |  ||||||||||||||||||||| |||||    
T  16379407 gtacaaacattacttttgtggcctttctcaccacaagcatagcaaacaatctcagcaacaacatctttctttctcggcctcctctcatcattaactctct 16379506  T
Q  239 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    |  | ||||| ||||||| ||||||||| |||||||||||||| || || ||||| ||| | |||||| |||  ||||| ||||||||    
T  16379507 gtttgcccttatcagcagaggcactgtaaggcttaggacgactctgttgacccttgcctttccgctcattcacaaccttgtaatgagc 16379594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 73 - 326
Target Start/End: Original strand, 18273045 - 18273298
Alignment:
Q  73 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccac 172  Q
    ||||||||||| ||||||| |   || |||||||  ||||| | ||||||||||||||| ||     | ||||| |||||||||||||| ||||| ||||    
T  18273045 ccacgcttgcattcagctatcgtatgccccttctttccacatcggaagcacttcttctcctcaccaatgcaaacattactcttgtggcccttctcaccac 18273144  T
Q  173 acttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggctt 272  Q
    ||||  ||||||| ||||||| |||| |||||||  | || || |||||||||||||| | ||| |||   || |||||| |||| |||||||| |||||    
T  18273145 acttgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgctcccctttgtcaacaggagcactgtagggctt 18273244  T
Q  273 aggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
     ||||||| |||||| |||||    || ||||||||| | ||||||||||||||    
T  18273245 cggacgaccttgctgacccttgttcctccgctcactcctaaccttataatgagc 18273298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 141 - 294
Target Start/End: Complemental strand, 21228600 - 21228447
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||  || | || |||| ||| |||||    | ||||||     
T  21228600 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgt 21228501  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
     ||||||| |||||||||||||| || |||||||| ||||| ||||| ||||||    
T  21228500 ttacccttatcagcaggggcactatagggcttagggcgactctgctggccctta 21228447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 41350614 - 41350560
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  41350614 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacc 41350560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 21045158 - 21045046
Alignment:
Q  181 caaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgac 280  Q
    ||||| |||||||||| ||||||| || |  | || |||||||||||||||| ||| ||| | ||||| |||||||| |||||||| ||||| |||||||    
T  21045158 caaacaatctcagcagtagcatctttctttcttggtctcctctcatcattaactctttgcttgcccttatcagcaggagcactgtaaggctttggacgac 21045059  T
Q  281 tttgctgtccctt 293  Q
    ||||||| |||||    
T  21045058 tttgctgaccctt 21045046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 16347541 - 16347490
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  16347541 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16347490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 16354189 - 16354138
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  16354189 tacccttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16354138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 51330430 - 51330384
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  51330430 tcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 51330384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 73 - 326
Target Start/End: Complemental strand, 20853872 - 20853619
Alignment:
Q  73 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccac 172  Q
    ||||||||||| ||||| ||||  |||||||||||||| || ||||| || ||||||||||| | ||| ||| | |||||||||||||| ||| | ||||    
T  20853872 ccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccac 20853773  T
Q  173 acttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggctt 272  Q
    | ||  ||||||| |  ||| ||||||||| ||||   || |||  |||||||||||| | ||| ||  | || |||| || ||| |||||||| |||||    
T  20853772 atttgtaacaaacaacatcaacaggagcatttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtaggagcactgtagggctt 20853673  T
Q  273 aggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
     || |||||   ||| ||||||   |||  ||| ||||||||||||||||||||    
T  20853672 cgggcgactactctgacccttattccttttctcgctcatcaccttataatgagc 20853619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 33387975 - 33387924
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  33387975 tacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 33387924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 22117102 - 22117214
Alignment:
Q  214 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatca 313  Q
    ||||||||||||||||||| ||| ||  | ||||| ||||||||  ||||||| ||||| |||||||||||||| ||||| ||| | | |||| |||  |    
T  22117102 ggcctcctctcatcattaactctttgttttcccttatcagcaggaacactgtaaggctttggacgactttgctgacccttgcctttcctctcattcaaaa 22117201  T
Q  314 ccttataatgagc 326  Q
    |||| ||||||||    
T  22117202 ccttgtaatgagc 22117214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 294
Target Start/End: Complemental strand, 17042057 - 17041907
Alignment:
Q  143 aaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcct 242  Q
    |||| |||||||||||||||||| ||||||| || |||||||  ||||| | |||||||||  || | || |||| ||| |||||    | ||||||| |    
T  17042057 aaacattactcttgtggcctttcccgccacagttgaaacaaaa-atctccgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgctt 17041959  T
Q  243 acccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
     ||||| |||||||||||||| || |||||||| ||||| ||||| ||||||    
T  17041958 gcccttatcagcaggggcactataaggcttagggcgactctgctggccctta 17041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 19109791 - 19109834
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  19109791 tcagcaggggcactgtacggcttaggacgactctgttgtccctt 19109834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 21833723 - 21833766
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  21833723 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 21833766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 21752465 - 21752527
Alignment:
Q  244 cccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctca 306  Q
    ||||| ||||||| ||||||||| |||||||||||||| ||||| |||||| || ||||||||    
T  21752465 cccttatcagcagtggcactgtaaggcttaggacgactctgctgacccttagcttttcgctca 21752527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 21842633 - 21842676
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| || ||||||||    
T  21842633 tcagcgggggcactgtacggcttaggacgactctgatgtccctt 21842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 22400741 - 22400784
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||    
T  22400741 tcagcaggggcactgtacagcttaggacgactctgctctccctt 22400784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 22402010 - 22402060
Alignment:
Q  244 cccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
    ||||| ||||||||||||||||| |||||||| ||||| ||||| ||||||    
T  22402010 cccttatcagcaggggcactgtaaggcttagggcgactctgctgaccctta 22402060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 22 - 330
Target Start/End: Original strand, 5391 - 5698
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||| ||||||||||| || ||||| || |||||||| || |||||||| |||||||| |||||||||||   ||| || |||||||||||||||||||    
T  5391 cactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctgaagc 5490  T
Q  122 acttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcc 220  Q
    ||||||||||||| | ||| |||||| ||||||||||||||||| || |||||||| |||||||| || |||| ||||||||||||| | || |||||||    
T  5491 acttcttctcatc-tcggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctctt-ggcctcc 5588  T
Q  221 tctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttata 320  Q
    |||||||||| | ||||||| |||||||||||| ||||||||||||||||||  || |||| |||||||||||  ||||  ||||||||||||| || ||    
T  5589 tctcatcattcaatctctgcttacccttgtcagtaggggcactgtacggcttccgatgactctgctgtcccttgactctatgctcactcatcactttgta 5688  T
Q  321 atgagctttg 330  Q
    ||||||||||    
T  5689 atgagctttg 5698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 50294 - 50622
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || ||||  ||||||||||| || || || ||||||||||| || |||| ||| |||||||| |||||||||||   ||| |    
T  50294 ctaaccttcttaggctgggtacactacgaactgatatgaccttcctcattgcagttgtagcaaacaatatccccacgcttacaatcagctaaggtgtgtc 50393  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    | ||||||||||||||||| |||||||||||||| | ||| |||||| |||||||||||| |||| || |||||||| |||||||| || |||| |||||    
T  50394 ctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattactcttgtggtctttttcaccacacttgaaacaaacaatatcagtaggag 50492  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    |||||||| | || |||||||||||||||||   ||| ||| |||||||||||||||||||||| |||||||| |||| ||| ||||||||||| |||||    
T  50493 catctctcctcttgggcctcctctcatcattccatctatgcttacccttgtcagcaggggcactatacggcttcggaccactctgctgtcccttgcctct 50592  T
Q  300 tcgctcactcatcaccttataatgagcttt 329  Q
     ||||||||||||||||| |||||||||||    
T  50593 acgctcactcatcaccttgtaatgagcttt 50622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 134; Significance: 1e-69; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 62887 - 62558
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||| ||||| ||| | || ||||| ||||||||||| || | ||| || ||||||||  | |||||||| |||||||| |||||||||||   |||      
T  62887 ctaactttcttaggctgcgtacactgcgaactgatatgaccttattcattacagttgtagaaaacaacatccccacgcttacaatcagctaaagtgtgta 62788  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||| ||||||||||||||||| | |  ||| || |||||||||||||||||||| |||||||| ||  |||| || |||| ||||||    
T  62787 ctttctgaccacacctaaagcacttcttctcatcatggtcacatacattactcttgtggcctttctcaccacacttgaattaaacaatatcagtaggagc 62688  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| | ||||||| |||||||||||||||||||||| |||||||| |||||||| ||||| ||||| |||||     
T  62687 atctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcggacgactctgctgccccttgcctcta 62588  T
Q  301 cgctcactcatcaccttataatgagctttg 330  Q
    ||||||||||||||||| ||||||||||||    
T  62587 cgctcactcatcaccttgtaatgagctttg 62558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 65413 - 65211
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || |||||||||||||| ||||| || || |  || || ||||| |||||||| || | ||| |||| ||| |||  ||| |    
T  65413 ctaaccttctttggctgggtgcactgtgaactgatgtggccttcctcatcacaattataacaaacaacatctcctctcttacaattagccaacgtgtgtc 65314  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||| | ||||||||||||    
T  65313 ctttctgaccacacctgaagcactttttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggagc 65214  T
Q  201 atc 203  Q
    |||    
T  65213 atc 65211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 329
Target Start/End: Complemental strand, 65214 - 65109
Alignment:
Q  224 catcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatg 323  Q
    ||||||| ||||||||| | ||||| |||||||||||||| || ||||| || ||||| || ||||| |||   |||| ||||||||||||||| |||||    
T  65214 catcattcagtctctgcttgcccttatcagcaggggcactatatggcttcgggcgactctgttgtccattattccttctctcactcatcaccttgtaatg 65115  T
Q  324 agcttt 329  Q
    ||||||    
T  65114 agcttt 65109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 1426 - 1098
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || ||||| ||||||||||| || || || |||||  |||| || |||| ||| |||||||| || ||||||||   ||| |    
T  1426 ctaaccttcttaggctgagtacactgcgaactgatatgaccttcctcattgcaagtgtagcaaacaatatccccacgcttacattcagctaaagtgtgtc 1327  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||||||||||||||||||  |   |||| | ||||||||||||||||| || |||||||| ||||||| |||||||| ||||||    
T  1326 ctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagc 1227  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| || |||||  |||||||||||||||| |||||||| ||||| |||||||| || |||||||| |||||     
T  1226 atctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtcccttgcctcta 1127  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  1126 cgctcactcatcaccttgtaatgagcttt 1098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 5324 - 4996
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||   ||| |||| |||||||||||||||||| || |||||||| || || |||||||| |  ||||| |||||||||||   ||| |    
T  5324 ctaaccttcttcggttatgtacactatgaactgatatggccctcctcattgcagttatagcaaacaacatctctccgcttacaatcagctaaagtgtgtc 5225  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    |||||||||||||||||||||||||||||||||||||   ||| || ||||||||||||||||| |||||||||||  | ||||| ||||||||||||||    
T  5224 ccttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagc 5125  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |  | |||| |||||||| ||| || || ||| | |||||||||||||| ||||| || || ||||||||||| | || ||| |||||||||    
T  5124 atctctcctcctaggccacctctcattattcagcctttgctttcccttgtcagcaggagcactatatggtttaggacgactctactttcctttacctctt 5025  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  5024 cgttcactcatcaccttgtaatgagcttt 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 7933 - 8261
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || ||||| ||||||||||| || || || |||||  |||| || |||| ||| |||||||| || ||||||||   ||| |    
T  7933 ctaaccttcttaggctgagtacactgcgaactgatatgaccttcctcattgcaagtgtagcaaacaatatccccacgcttacattcagctaaagtgtgtc 8032  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||||||||||||||||||  |   |||| | ||||||||||||||||| || |||||||| ||||||| |||||||| ||||||    
T  8033 ctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagc 8132  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| || |||||  |||||||||||||||| |||||||| ||||| |||||||| || |||||||| |||||     
T  8133 atctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtcccttgcctcta 8232  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||||||||| |||||||||||    
T  8233 cgctcactcatcaccttgtaatgagcttt 8261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 129; Significance: 1e-66; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 115751 - 116027
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  | || ||||| ||||||||||| |||||  | ||||| || || ||||| | |||||||||||||||||||||||||| |||||    
T  115751 ctaaccttcttcggttgagtgcactgagaactgatatgaccctccccattgcaattatagcatactatatcaccacgcttgcaatcagctaacacgtgac 115850  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||     
T  115851 ccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagt 115950  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggac 277  Q
     |||||    || ||||| ||||||||||| ||||  ||| | |||||  |||||||||| ||||||||||||||||    
T  115951 gtctcttcccttgggccttctctcatcattcagtcgttgctttcccttaccagcaggggcgctgtacggcttaggac 116027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 93951 - 93808
Alignment:
Q  59 aacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtg 158  Q
    |||| |||| ||| |||||||||||||| || ||||  ||||| |||||||| || ||||| || ||||||||||| |  || ||| | |||||||||||    
T  93951 aacaaacaatatctccacgcttgcaatccgccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtg 93852  T
Q  159 gcctttctcgccacacttaaaacaaactatctcagcaggagcat 202  Q
    ||| ||| | ||||| ||  ||||||| | |||| |||||||||    
T  93851 gcccttcacaccacatttgtaacaaacaacctcaacaggagcat 93808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 293
Target Start/End: Complemental strand, 107643 - 107600
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| || ||||||||    
T  107643 tcagcgggggcactgtacggcttaggacgactctgttgtccctt 107600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 8553 - 8602
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||||||||||||||||||| |||||||| |  ||||||||| ||||    
T  8553 ctcttgtggcctttctcgccacaattaaaacagataatctcagcaagagc 8602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 128; Significance: 4e-66; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 5629 - 5954
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||  | || ||||| ||||||||||| || ||||| || || ||||| || |||||||| |||||||| |||||||||||   ||| |    
T  5629 ctaaccttcttaggttgcgtacactgcgaactgatatgaccttcttcattacaattgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtc 5728  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    | |||||||||||||| ||||||||||||||||| | | | ||| ||||||||||||||||||||||| |||||||| || |||| |||||||| |||||    
T  5729 ctttctgaccacacctaaagcacttcttctcatc-tcgatcacacacgttactcttgtggcctttctcaccacacttgaagcaaattatctcagtaggag 5827  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    |||||||| | ||  |||||||||||||||| | ||||||| |||||||||||||||||   || |||||||| |||||||| || ||||||||||||||    
T  5828 catctctcctcttaagcctcctctcatcattcaatctctgcttacccttgtcagcaggg---ctatacggcttcggacgactatgttgtcccttacctct 5924  T
Q  300 tcgctcactcatcaccttataatgagcttt 329  Q
     ||||||||||||||||| |||| ||||||    
T  5925 gcgctcactcatcaccttgtaataagcttt 5954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 11837 - 11524
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||| ||| ||||| || ||| | |||||||||||||| ||||  || ||||||||||  ||||||||   ||||||||||||||||||||||||||    
T  11837 cactgtgtactaatatgaccttctccattgcagttgtaacagacaatgtccccacgcttgctttcagctaaactgtgacccttctgaccacacctgaagc 11738  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   ||| || |||||||||||||||||||  ||||||||  | || || |||||| | || ||||||||| | || ||| ||||    
T  11737 acttcctatcatctcttccacatacattactcttgtggcctttcttaccacacttgtatcatacaatctcatctggtgcatctctcctcttgggcttcct 11638  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||| | ||| |||| |||||||||||| | || ||||||||||| || | ||||||||| | ||| |||    
T  11637 atcatcacccatcttctgctttcctttgtcagcaagagcaatgtaaggcttaggacgattctgttgtcccttacccctcctctcactcattatcttgtaa 11538  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  11537 tgagctttggtgtc 11524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 51 - 329
Target Start/End: Original strand, 319482 - 319760
Alignment:
Q  51 gcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgtta 150  Q
    |||||| ||||| |||||||| || ||||| |||| ||||||   ||| || |||||||||||||||||||||||||||||||| ||   ||| || |||    
T  319482 gcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacatta 319581  T
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgt 250  Q
    ||||||||||||||||||||||||||  | ||||| ||| ||||||||||||||||| |||| ||||||||||||||||| || |||||| || ||||||    
T  319582 ctcttgtggcctttctcgccacacttgtagcaaacaatcccagcaggagcatctctcctattgggcctcctctcatcattcagcctctgcttatccttgt 319681  T
Q  251 cagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    ||||||| ||||| |||||||| |||||||| |||||||| || || ||||| ||||| |||||||| |||||||||||    
T  319682 cagcaggagcactatacggcttcggacgactctgctgtcctttgccccttcgatcacttatcaccttgtaatgagcttt 319760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 325896 - 326151
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||  |||| |||||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||| |||| ||||||   ||| |    
T  325896 ctaaccttctttggttgtgtgcactgtgaactgatatggccctcttcattgcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtc 325995  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||| ||||||||||||||||||| ||   ||| || |||||||||||| ||||||||||||||||  | ||||| ||||||||||||||    
T  325996 ctttctgaccacacttgaagcacttcttctcatctttatcacagacattactcttgtggtctttctcgccacacttgtagcaaacaatctcagcaggagc 326095  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcagg 257  Q
    ||||||| |||| ||||||||||||||||| || |||||| ||||||||| ||||||    
T  326096 atctctcctatt-ggcctcctctcatcattcagcctctgcttacccttgttagcagg 326151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 930 - 601
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || ||||| ||||||||||| || || ||||||||||| ||||| ||||  || |||||||| ||||||||||    ||| |    
T  930 ctaaccttctttggctgcgtacactgcgaactgatatgtccttcctcgttgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtc 831  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||||||||||||||||||||||||||||||  |   |||||| ||||||||||||||||| || |||||||| || ||| | || || | ||||||    
T  830 ccttctgaccacacctgaagcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacttgaagcaatcaatgtccgtaggagc 731  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| |  |||||| | |||||||| ||||| ||||| |||||||| |||||||||||||||||||| |||||     
T  730 atctctcctcttgggcctcctctcatcatttaacctctgcttccccttgtcggcaggagcactatacggcttcggacgactttgctgtcccttgcctcta 631  T
Q  301 cgctcactcatcaccttataatgagctttg 330  Q
     | |||||||||||||| ||||||||||||    
T  630 tgttcactcatcaccttgtaatgagctttg 601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 34526 - 34854
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||| | || ||||  ||||| ||||| || || || |||||||| ||||| ||||| || |||||||| |||||| ||||   ||| |    
T  34526 ctaaccttcttcggctgcgtacactacgaactaatatgaccttcctcattgcagttataacaaacaacgtccccacgcttacaatcaactaatgtgtgtc 34625  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||| |||||||||||||||||||||||||||  |   ||| || |||||||||||||||||||| |||||||| |||||||| || |||| ||||||    
T  34626 ctttctaaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttctcaccacacttgaaacaaacaatgtcagtaggagc 34725  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| |  || ||| |||||||||||||||| ||||| ||| |||| |||||||| ||||||||||| |||||     
T  34726 atctctcctcttgggcctcctctcatcatttaacctttgcttacccttgtcagcaggagcactatacagcttcggacgactctgctgtcccttgcctctg 34825  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  34826 cgttcactcatcaccttgtaatgagcttt 34854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 998 - 663
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  | || ||||| ||||||||||| || || || |||||||| ||| | ||||  || |||||||| ||||||||||    ||  |    
T  998 ctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcagttataataaacaatgtccccacgcttacaatcagctagagtgtatc 899  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||||||||||||||||||||||||  |   |||||||||||||||||||||||| || |||||||| || ||||| ||||| | ||||||    
T  898 ctttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttttcaccacacttgaagcaaacaatctcggtaggagc 799  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| |  |||| | |||||||||||||||| ||| | |||||||| |||||||| || ||||||||||||||     
T  798 atctctcctcttgggcctcctctcatcatttaacctcttcttacccttgtcagcaggagcattatacggcttcggacgactctgttgtcccttacctctg 699  T
Q  301 cgctcactcatcaccttataatgagctttgatgtcc 336  Q
    || |||||||||||||| |||||||||||| |||||    
T  698 cgttcactcatcaccttgtaatgagctttgttgtcc 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 16826 - 17155
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| | | | || ||||| ||||| ||||| || || || || |||||||| || |||| ||| ||||||||||||||||| ||   ||| |    
T  16826 ctaaccttcttagtctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtc 16925  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    | |||||||||||||| ||||||||||||||||| | | | ||| || |||||||||||||||||||| |||||||| |||||||  ||||||| |||||    
T  16926 ctttctgaccacacctaaagcacttcttctcatc-tcgatcacacacattactcttgtggcctttctctccacacttgaaacaaataatctcagtaggag 17024  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    |||||||| | || ||||||||||||||||| ||| ||||| |||||||||| ||||| ||||| |||||||| |||||||| || |||||||| ||| |    
T  17025 catctctcctcttaggcctcctctcatcattcagtttctgcttacccttgtcggcaggagcactatacggcttcggacgactctgttgtcccttgccttt 17124  T
Q  300 tcgctcactcatcaccttataatgagctttg 330  Q
     ||||||||||||||||| ||||||||||||    
T  17125 gcgctcactcatcaccttgtaatgagctttg 17155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 70297 - 70626
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || ||||| ||||| ||||| || || || || |||||||| || |||| ||| ||||||||||||||||| ||   ||| |    
T  70297 ctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtc 70396  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    | ||||| ||||| ||||| |||||||||||||| | ||| ||| || |||||||||||||||||||| ||||||||||| ||||  ||||||| |||||    
T  70397 ctttctgtccacatctgaaacacttcttctcatc-tcggtcacacacattactcttgtggcctttctcaccacacttaaagcaaataatctcagtaggag 70495  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    |||||||| | || ||||||||||||||||| || |||||  |||| ||||||||||| ||||| ||||| || |||||||| || ||||||||||||||    
T  70496 catctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacgactctgttgtcccttacctct 70595  T
Q  300 tcgctcactcatcaccttataatgagctttg 330  Q
     |||||||||||||| |||||||||||||||    
T  70596 gcgctcactcatcactttataatgagctttg 70626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 5994 - 6321
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||| ||||||||||| ||||| || || ||||||||||| ||||| ||||  || |||||||||||||||||||    ||| |    
T  5994 ctaaccttcttcggttgtgtacactgtgaactaatatgtccttcctcgttgcagttataacaaacaatgtccccacgcttgcaatcagctagtgtgtgtc 6093  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | ||||||||||| ||||||||||||||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| || |||| | ||||    
T  6094 ctttctgaccacatctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaagagc 6193  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| |  || ||| |||||||||||| ||| ||||| |||||||| |||||||| ||||||||||| |||||     
T  6194 atctctcctcttgggcctcctctcatcatttaacct-tgcttacccttgtcagtaggagcactatacggcttcggacgactctgctgtcccttgcctctg 6292  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  6293 cgttcactcatcaccttgtaatgagcttt 6321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 68 - 325
Target Start/End: Complemental strand, 4501 - 4244
Alignment:
Q  68 catcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctc 167  Q
    ||||||||||||| |||||||||||   ||| || |||||||||||||||||||| |||||||||||  |   |||||| |||||||| |||||||||||    
T  4501 catcaccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctc 4402  T
Q  168 gccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtac 267  Q
    ||||||||| || ||||| || |||| ||||||||||||| | || ||||||||||||||||| |  |||||| |||||||||||||||| ||| |||||    
T  4401 gccacacttgaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcagtgtac 4302  T
Q  268 ggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgag 325  Q
    ||||| |||||||| || |||||||| ||||| || |||||||||||||| |||||||    
T  4301 ggcttcggacgactctgttgtcccttgcctctacgttcactcatcaccttgtaatgag 4244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 203
Target Start/End: Complemental strand, 17148 - 16979
Alignment:
Q  34 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcat 133  Q
    ||||| |||||||| ||||||||| |||| || | ||||||| ||||||| ||||||||   |||||||||||  ||||||| ||| || |||||| | |    
T  17148 atatgaccctcttctttgcagttgaaacacacgatatcaccatgcttgcagtcagctaatgtgtgacccttcttgccacaccagaaacatttcttcacct 17049  T
Q  134 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||  | ||||||  | ||||||||||||||||| ||||| || ||||||   |||||||||||| ||||    
T  17048 cctctggacaaacagtgctcttgtggcctttctcaccacaattgaaacaagtaatctcagcaggaacatc 16979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 107 - 326
Target Start/End: Original strand, 799 - 1018
Alignment:
Q  107 gaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctct 206  Q
    |||||||||||||| ||||||||||||| ||   ||| || ||||||||||||||||||| |||||||||  | ||||| ||||||||||||||||||||    
T  799 gaccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctct 898  T
Q  207 catattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctca 306  Q
    | | || ||||||||||||||||| | ||||||| |||||||||||||||| ||||| || || ||||||||||| || |||||||||||||| ||||||    
T  899 cctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgctca 998  T
Q  307 ctcatcaccttataatgagc 326  Q
    ||||||||||| ||||||||    
T  999 ctcatcaccttgtaatgagc 1018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 5242 - 5570
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  | || ||||| ||||||||||| || || || |||||||| ||||| ||||| || || ||||| |||| ||||||   ||| |    
T  5242 ctaaccttcttcggttgagtacactgcgaactgatatgaccttcctcattgcagttataacaaacaacgtctccccgcttacaattagctaatgtgtgtc 5341  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||| ||||||||||||||||||||||||||| ||   ||| || |||||| |||||||||||||||| |||||  | ||||| ||||||||||||||    
T  5342 ctttctaaccacacctgaagcacttcttctcatctttatcacagacattactcctgtggcctttctcgccgcacttgtagcaaacaatctcagcaggagc 5441  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| |  | ||||||||||||||||| |  |||||  | ||||| |||||||| ||||| || || ||||||||||| || ||||| |||||||||    
T  5442 atctctcctcgtgggcctcctctcatcattcaacctctgttttcccttatcagcaggagcactatatggtttaggacgactctgttgtcctttacctctt 5541  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  5542 cgttcactcatcaccttgtaatgagcttt 5570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 22 - 329
Target Start/End: Original strand, 42908 - 43215
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||| ||||| ||||| || ||| | || || ||||| || |||||||| ||||||||  |||| |||||   ||| || ||||||| |||||| ||||    
T  42908 cactgcgaactaatatgaccttctgcattacaattgtagcaaacaacatccccacgcttaaaatccgctaaagtgtgtcctttctgactacacctaaagc 43007  T
Q  122 acttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcc 220  Q
    ||||||||||||| | ||| |||||| |||||||||||||||||||| | |||||| ||||||| |||||||| ||||||||||||| | || |||||||    
T  43008 acttcttctcatc-tcggtcacaaacattactcttgtggcctttctcacaacacttgaaacaaattatctcagtaggagcatctctcctcttaggcctcc 43106  T
Q  221 tctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttata 320  Q
    |||||||||| |  |||||  |||||||||||||||||||||| |||||||| |||||||| | ||||||||| ||||  |||| |||||||||||| ||    
T  43107 tctcatcattcaacctctgtttacccttgtcagcaggggcactatacggcttcggacgactctactgtcccttgcctcggcgcttactcatcaccttgta 43206  T
Q  321 atgagcttt 329  Q
    |||||||||    
T  43207 atgagcttt 43215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 1701 - 1388
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| |||||| | ||||||||||| || | ||  || ||||||||||| ||||||||   ||| ||||||||||||||||||||||    
T  1701 cactgtgaactgatatgaccctctccattgcagttgtagcagataatgtccccacgcttgcattcagctaaactgtgtcccttctgaccacacctgaagc 1602  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| ||||||| ||   |||||| ||||||||||| |||||||| ||||||||  ||||||| ||||||| ||||||||||||| | || ||||||||    
T  1601 acttcctctcatctttaccacaaacattactcttgtgtcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcct 1502  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     |||||| | |   ||||| | || ||||||||||| |||||||| |||||| ||||| | |||||||||||||| || | ||||||||| |  || |||    
T  1501 atcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggcttatgacgattctgctgtcccttacccctcctctcactcattatgttgtaa 1402  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  1401 tgagctttggtgtc 1388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 9887 - 9562
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  | || || |||||||| ||||||||||| || |||||||| || || |||||||| || ||||| |||||| |||    ||| |    
T  9887 ctaaccttcttcggttgcgtacattgtgaacttatatggccctcctcattgcagttatagcaaacaacatctccccgcttacaatcaactagggtgtgtc 9788  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||||||   ||| || |||||||||||||| ||||| ||||||||  | ||||| || |||||||||||    
T  9787 ctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcccttctcaccacacttgtagcaaacaatatcagcaggagc 9688  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| |  || ||| | ||||| |||||| | ||||| || || |||||| |||| |||||||| |||||||||    
T  9687 atctctcctgtttggcctcctctcatcattcatcctttgctttcccttatcagcaagagcactatatggtttaggatgactctgctgtcctttacctctt 9588  T
Q  301 cgctcactcatcaccttataatgagc 326  Q
    || |||||||||||||| ||| ||||    
T  9587 cgttcactcatcaccttgtaaagagc 9562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 23913 - 23774
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || |||| || |||||| || ||| |||| || | || |||| ||| ||||||   | ||||||  | ||||    
T  23913 ttactcttgtggcctttctcaccacaagtataacagacaatctcaacatgagtatctttcttcttaggccacctatcatcaaccattctctgtttgccct 23814  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  23813 tatcagcaggagcactgtatggcttaggacgactctgctg 23774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 969 - 764
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||| ||||  | || ||||||||||||||||| |||||||| |||||||| ||||| |||| |||||||||||||||||||||||    ||| |    
T  969 ctaaccttcctcggttgcgtacactgtgaactgatatgaccctcttcattgcagttataacaaacaatatcaccacgcttgcaatcagctagagtgtgtc 870  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||| |||||||||  ||||||| ||||||||||||||    
T  869 ctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttatggcctttcttgccacacttgtaacaaacaatctcagcaggagc 770  T
Q  201 atctct 206  Q
    ||||||    
T  769 atctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 3920 - 3838
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    ||||||||||| ||||| |||||||| |||||||| |||||||| || |  ||||| |||||||||||||| |||||||||||    
T  3920 ttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttgtaatgagcttt 3838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 41945 - 42258
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||    
T  41945 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 42044  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| | |||||  |   |||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || ||||||||    
T  42045 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 42144  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     ||||||   |   ||||| | || ||||||||||| |||||||| |||||||||||| | || ||||||||||| || | ||||||||| | |||||||    
T  42145 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataa 42244  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  42245 tgagctttggtgtc 42258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 399 - 71
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  | || || || ||||| ||||| || || || |||||||| ||||| ||||  || |||||||| ||||||||||    ||| |    
T  399 ctaaccttcttcggttgcgtacattgcgaactaatatgaccttcctcattgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtc 300  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
      |||||||||||| |||||||||||||||||||  |   ||| || ||||||||||||||||||||||||||||| || ||||| || |||| ||||||    
T  299 ttttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcctttctcgccacacttgaagcaaacaatatcagtaggagc 200  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
     |||||  | || ||||||||||||||||| |  |||||| |||||||||||||||| ||| | |||||||| |||||||| ||||||||||| |||||     
T  199 ctctctgctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcattttacggcttcggacgactctgctgtcccttgcctctg 100  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||||||||| |||||||||||    
T  99 cgttcactcatcaccttgtaatgagcttt 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 73 - 329
Target Start/End: Original strand, 153753 - 154009
Alignment:
Q  73 ccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccac 172  Q
    |||||||| |||||||||||   ||| || ||||||||||||||||||||||||||||||||  |   ||| || |||||||| |||| ||| || ||||    
T  153753 ccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttatggcttttttcaccac 153852  T
Q  173 acttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggctt 272  Q
    |||| || ||||| |||||||  |||||||||||| | || ||||||||||||||||| |||| |||| |||||||||||||||| ||||| || |||||    
T  153853 acttgaagcaaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcagtcgctgcttacccttgtcagcaggagcactatatggctt 153952  T
Q  273 aggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
     |||||||| |||||||||||||||||| | |||| ||||||||| |||||||||||    
T  153953 cggacgactctgctgtcccttacctctttgttcacccatcaccttgtaatgagcttt 154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 55 - 326
Target Start/End: Original strand, 29770 - 30041
Alignment:
Q  55 ttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactct 154  Q
    ||||| || |||||||||||||||||||| |||||||    ||| || |||   ||||||| ||| |||||||||||||| | | ||||||| |||||||    
T  29770 ttgtagcaaacaacatcaccacgcttgcactcagctattgtgtgtcctttcgtcccacaccggaaacacttcttctcatcatggttacaaacattactct 29869  T
Q  155 tgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagc 254  Q
    ||||||| || || |||||||| ||| | |||||||||  ||||||||||||| |  | ||||||||||||||||| ||||||||| |||| ||||||||    
T  29870 tgtggcccttttcaccacacttgaaatagactatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgcttacctttgtcagc 29969  T
Q  255 aggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    ||| |||||  |||| || |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  29970 aggagcactagacggtttcggacgactctgctgtcccttgcctctacgctcactcatcaccttataatgagc 30041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 4419 - 4091
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || ||||| ||||| ||||| || || || || |||||||| || |||| ||| ||||||||||||||||| ||   ||| |    
T  4419 ctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtc 4320  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    | |||||||||||||| ||||||||||||||||| | | | ||| || ||||| |||| | ||||||| |||||||| || ||||  ||||||| |||||    
T  4319 ctttctgaccacacctaaagcacttcttctcatc-tcgatcacacacattacttttgtagtctttctcaccacacttgaagcaaataatctcagtaggag 4221  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    |||||||| | || ||||||||||||||||| |  |||||  |||| ||||||||||| ||||| ||||| || |||||||| | |||||||||||||||    
T  4220 catctctcctcttaggcctcctctcatcattcaacctctgtttacctttgtcagcaggagcactatacggtttcggacgactctactgtcccttacctct 4121  T
Q  300 tcgctcactcatcaccttataatgagcttt 329  Q
     |||||||||||||| ||||||||||||||    
T  4120 gcgctcactcatcactttataatgagcttt 4091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 671 - 984
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||| ||||| |||||| | ||||||||||| || ||||  || |||||||| || ||||||||   ||||||||||||||| ||||||||||    
T  671 cactgtgaacttatatgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccgcacctgaagc 770  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| ||||||| ||   |||||| || |||||||||||||| || ||||||||  ||||||| ||||||| ||||||||||||| | || ||||||||    
T  771 acttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcct 870  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     |||||| | |   ||| | | || ||||||||||| |||||||| |||||||||||| | |||||||||||||| || | ||||||||| | ||| |||    
T  871 atcatcaatcaacttctactttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaa 970  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  971 tgagctttggtgtc 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 179 - 329
Target Start/End: Original strand, 2198 - 2348
Alignment:
Q  179 aacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacg 278  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||| |  || ||| | || ||||||| ||||||||||||||| ||||||||    
T  2198 aacaaactatctcagcaggagcatctctcctattccgcctcctctcatcattcaacctttgctttcctttgtcagtaggggcactgtacggtttaggacg 2297  T
Q  279 actttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2298 actctgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 2348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 103 - 329
Target Start/End: Complemental strand, 555 - 329
Alignment:
Q  103 ttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 202  Q
    ||||||||||||||||||||||||||||||||  |   ||||||  |||| ||||||||||||||||||||||| |||||||| || ||   ||||||||    
T  555 ttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaacaaacaatatctataggagcat 456  T
Q  203 ctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcg 302  Q
    ||||| | || ||||| ||||||||||| |  |||||| |||||||||||| ||| ||||| |||||||| |||||||| ||||||||||||||||| ||    
T  455 ctctcctcttgggccttctctcatcatttaacctctgcttacccttgtcagaaggagcactatacggcttcggacgactgtgctgtcccttacctctacg 356  T
Q  303 ctcactcatcaccttataatgagcttt 329  Q
     | |||||||||||| |||||||||||    
T  355 tttactcatcaccttgtaatgagcttt 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 329
Target Start/End: Complemental strand, 1599 - 1274
Alignment:
Q  4 accttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccct 103  Q
    |||||||||||| | || ||||| ||||||||||| || ||||| ||||||||||| || ||||  || |||| ||| || |||||||    ||| ||||    
T  1599 accttcttcggctgagtacactgcgaactgatatgaccttcttcattgcagttgtagcaaacaatgtccccacacttacattcagctagggtgtgtccct 1500  T
Q  104 tctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||| ||||||||| || || ||| || ||||  |   |||| | || |||||||||||||| || ||||||||  |||| || |||||||||||||||||    
T  1499 tctaaccacacctaaaacatttcctcacatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggagcatc 1400  T
Q  204 tctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgc 303  Q
    |||| | || |||||||| |||||||| | | ||||  | |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| | |    
T  1399 tctcctcttgggcctcctatcatcattcattttctgttttcccttgtcagcaggagcactgtaaggcttaggacgactctgctgtcccttacctctcctc 1300  T
Q  304 tcactcatcaccttataatgagcttt 329  Q
    |||||||||||||| |||||||||||    
T  1299 tcactcatcaccttgtaatgagcttt 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 514447 - 514134
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||||||| |||||| | ||||||||||| || ||||  || |||| ||| || |||| |||   ||| ||||||||||||||||||||||    
T  514447 cactgtgaactgatatgaccctctccattgcagttgtagcagacaatgtccccacacttacattcagttaagctgtgtcccttctgaccacacctgaagc 514348  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| |||| || ||   |||||| || ||||||||||||||||| ||||||||  ||||||| ||||||| ||||||||||||| | || ||||||||    
T  514347 acttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcct 514248  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataa 321  Q
     |||||||| |   ||| | | || ||||||||||| ||||| || |||||||||||| | |||||||||||||| || | ||||||||| | ||| |||    
T  514247 atcatcattcatcttcttctttcctttgtcagcaggagcactttaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttgtaa 514148  T
Q  322 tgagctttgatgtc 335  Q
    ||||||||| ||||    
T  514147 tgagctttggtgtc 514134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 141 - 329
Target Start/End: Complemental strand, 5877 - 5689
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| ||||||||||||||||| || ||||||||  || |||| || |||| ||||||||||||| | || ||||||||||||||||| |||||||||    
T  5877 acaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcagtctctgc 5778  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
     |||||||||||||||| ||||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  5777 ttacccttgtcagcaggagcactatacggcttcggatgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagcttt 5689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 9136 - 8808
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||||   |||| ||||| ||| |||| || || || || |||||||| || || |||||||| || ||||| |||| ||||||   ||| |    
T  9136 ctaaccttcttcgtttgtgtacactgcgaattgatttgaccttcctcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtc 9037  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    | |||||||||||||||||||||||||||||||||||   ||| || ||||||||||||| |||||| ||||||||  | ||||| |||| ||||| |||    
T  9036 ctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcttttctcaccacacttgtagcaaacaatcttagcagaagc 8937  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| || |||||| | |||||||| ||||| ||||| || || ||| ||| ||| |||| ||| |||||||||    
T  8936 atctctcctcttgggcctcctctcatcattcagcctctgctttcccttgtctgcaggagcactatatggtttatgacaactctgctatcctttacctctt 8837  T
Q  301 cgctcactcatcaccttataatgagcttt 329  Q
    || |||||||| ||||| | |||||||||    
T  8836 cgttcactcataaccttgtcatgagcttt 8808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 141 - 329
Target Start/End: Original strand, 115953 - 116141
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| ||||||||||||||||| || |||||| | |||||||| || |||| ||||||||| ||| | || ||||||||||||||||| ||||||| |    
T  115953 acaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcctctcatcattcagtctcttc 116052  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
     |||||||||||||||| ||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  116053 ttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagcttt 116141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 326
Target Start/End: Original strand, 51842 - 52165
Alignment:
Q  3 aaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccc 102  Q
    ||||||||| ||| | || ||||||||||| ||||  || ||||| |  ||||| ||  | |||||||||||| ||||||||| ||||||   ||| ||     
T  51842 aaccttctttggctgcgtacactgtgaactaatattaccttcttcatcacagttatagaaaacaacatcaccatgcttgcaataagctaaagtgtgtcct 51941  T
Q  103 ttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagca 201  Q
    |||| ||||||||| ||||||||||||||||| | | | ||| || |||||||||||||||||||| |||||||| ||||| |  ||||||| |||||||    
T  51942 ttcttaccacacctaaagcacttcttctcatc-tcgatcacatacattactcttgtggcctttctcaccacacttgaaacagataatctcagtaggagca 52040  T
Q  202 tctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttc 301  Q
    |||||| |  | ||||||||||||||||| || |||||  |||| ||||||||||| ||||| ||| | || ||||| || ||||||||||||||||| |    
T  52041 tctctcctcctaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacagtttcggacggctctgctgtcccttacctctgc 52140  T
Q  302 gctcactcatcaccttataatgagc 326  Q
    ||||||||||||| |||||||||||    
T  52141 gctcactcatcactttataatgagc 52165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 34 - 329
Target Start/End: Complemental strand, 1354 - 1059
Alignment:
Q  34 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcat 133  Q
    ||||| |||||||| |  || ||||| || |||| |||||||||||| || ||||| ||   ||| || ||||  ||||| | ||| |||||||||||||    
T  1354 atatgaccctcttcatcacaattgtagcacacaatatcaccacgcttacactcagccaatgtgtgtcctttcttcccacatcggaaacacttcttctcat 1255  T
Q  134 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaag 233  Q
    |   |  ||| || |||| |||||||||||| || ||||| |||||||| || |||| || ||||||||||||| |  | ||||||||||||||||| ||    
T  1254 cacggtcacatacattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcag 1155  T
Q  234 tctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    ||||||| ||||||||||| |||| ||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  1154 tctctgcttacccttgtcaacaggagcactatacggtttcggacgactctgctgtcccttacctctgcgctcactcatcaccttataatgagcttt 1059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 34 - 329
Target Start/End: Complemental strand, 28367 - 28072
Alignment:
Q  34 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcat 133  Q
    ||||| |||||||| |  || ||||| || |||| |||||||||||| || ||||| ||   ||| || ||||  ||||| | ||| |||||||||||||    
T  28367 atatgaccctcttcatcacaattgtagcacacaatatcaccacgcttacactcagccaatgtgtgtcctttcttcccacatcggaaacacttcttctcat 28268  T
Q  134 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaag 233  Q
    |   |  ||| || |||| |||||||||||| || ||||| |||||||| || |||| || ||||||||||||| |  | ||||||||||||||||| ||    
T  28267 cacggtcacatacattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcag 28168  T
Q  234 tctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    ||||||| ||||||||||| |||| ||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  28167 tctctgcttacccttgtcaacaggagcactatacggtttcggacgactctgctgtcccttacctctgcgctcactcatcaccttataatgagcttt 28072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 27 - 325
Target Start/End: Complemental strand, 961 - 663
Alignment:
Q  27 tgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttc 126  Q
    ||||||||| || || || ||||||||||| || || ||||  ||||||||||| ||||||||||    ||| || |||||||||||| |||||||||||    
T  961 tgaactgatgtgaccttcctcgttgcagttatagcaaacaatgtcaccacgcttacaatcagctagtgtgtgtcctttctgaccacacatgaagcacttc 862  T
Q  127 ttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcat 226  Q
    ||||||||  |   ||| || ||||||||||||||||| || |||||||| || ||||| || ||   ||||||||||||| | || |||||||||||||    
T  861 ttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatatccataggagcatctctcctcttgggcctcctctcat 762  T
Q  227 cattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgag 325  Q
    |||| |||| |||| |||||||||||||||| | ||| || ||||| |||||||| || |||||||||||||| |  |||||||||||||| |||||||    
T  761 cattcagtcgctgcttacccttgtcagcaggagtactatatggcttcggacgactctgttgtcccttacctctacattcactcatcaccttgtaatgag 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 2820 - 3118
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||||||  |||  ||||||||||||||||||||||| || |||||||| || || || |  || || ||||| |||||||||||   ||| |    
T  2820 ctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtc 2919  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
    ||||||| |||||||||||| ||||||||||||| ||   |||||| |||||||||||||||||||  ||||||||  | ||||| |||||| |||||||    
T  2920 ccttctgtccacacctgaagaacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagc 3019  T
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    ||||||| | || ||||||||||||||||| |  |||||  | || ||||||||||| ||||| ||||| |||||| |||| |||||||  ||||||||    
T  3020 atctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcactatacggtttaggatgactctgctgtcatttacctct 3118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 5 - 335
Target Start/End: Original strand, 11170 - 11500
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||||||| | || |||||||| |||||||| |||||||| ||||||||||| || ||||  || |||||||| || |||||||    ||| |||||    
T  11170 ccttcttcggctgagtacactgtgagctgatatgaccctcttcattgcagttgtagcagacaatgtccccacgcttacattcagctagtgcgtgtccctt 11269  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatct 204  Q
    |||||||||||||||||||||| |||||||  |   |||| | || |||||||||||||| || ||||||||  ||||||| ||||||| ||||||||||    
T  11270 ctgaccacacctgaagcacttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatct 11369  T
Q  205 ctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgct 304  Q
    ||| | || || ||||| |||||||| |   ||||| | || ||||||||||| ||||| || |||||||||||| | ||||| |||||||| || | ||    
T  11370 ctcctcttaggactcctatcatcattcaaaatctgctttcctttgtcagcaggagcactataaggcttaggacgaatctgctgacccttacccctcctct 11469  T
Q  305 cactcatcaccttataatgagctttgatgtc 335  Q
    ||||||| | ||| |||||||||||| ||||    
T  11470 cactcattatcttgtaatgagctttggtgtc 11500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 329
Target Start/End: Complemental strand, 12508 - 12201
Alignment:
Q  20 ttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaa 119  Q
    ||||||| ||||||||||| || || || |||||||| ||||| ||||  || |||||||| |||||| ||||   ||| || |||||| ||||||| ||    
T  12508 ttcactgcgaactgatatgaccttcctcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaa 12409  T
Q  120 gcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactat-ctcagcaggagcatctctcatattcggcct 218  Q
    ||||||||||||||| ||   | |||| ||||||||||||||||||||||||||||| || ||| || | || | |     |||||||| | || |||||    
T  12408 gcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacacttgaagcaatctctacttaccct---catctctcctcttgggcct 12312  T
Q  219 cctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcacctta 318  Q
     ||||||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||| |||| |||||| ||||| || ||||||||||||||     
T  12311 actctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctacgatcactcatcaccttg 12212  T
Q  319 taatgagcttt 329  Q
    |||||| ||||    
T  12211 taatgatcttt 12201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 329
Target Start/End: Complemental strand, 20688 - 20381
Alignment:
Q  20 ttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaa 119  Q
    ||||||| ||||||||||| || || || |||||||| ||||| ||||  || |||||||| |||||| ||||   ||| || |||||| ||||||| ||    
T  20688 ttcactgcgaactgatatgaccttcctcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaa 20589  T
Q  120 gcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactat-ctcagcaggagcatctctcatattcggcct 218  Q
    ||||||||||||||| ||   | |||| ||||||||||||||||||||||||||||| || ||| || | || | |     |||||||| | || |||||    
T  20588 gcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacacttgaagcaatctctacttaccct---catctctcctcttgggcct 20492  T
Q  219 cctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcacctta 318  Q
     ||||||||||| ||||||||| |||||||||||||||| |||||||||||||| |||||||| |||| |||||| ||||| || ||||||||||||||     
T  20491 actctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctacgatcactcatcaccttg 20392  T
Q  319 taatgagcttt 329  Q
    |||||| ||||    
T  20391 taatgatcttt 20381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 162 - 329
Target Start/End: Original strand, 3215 - 3382
Alignment:
Q  162 tttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggca 261  Q
    |||||| |||||||| || ||||  ||||||| ||||||||||||| | || ||||||||||||||||| | ||||||| ||||||||||||||||||||    
T  3215 tttctccccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggca 3314  T
Q  262 ctgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    || |||||||| |||||||| || |||||||| ||||| |||||||||||||||||||||||||||||    
T  3315 ctatacggcttcggacgactctgttgtcccttgcctctgcgctcactcatcaccttataatgagcttt 3382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 49 - 335
Target Start/End: Complemental strand, 23990 - 23704
Alignment:
Q  49 ttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgt 148  Q
    ||||| |||||||| ||||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   ||| || |    
T  23990 ttgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacat 23891  T
Q  149 tactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccctt 248  Q
    ||||||||||||||||||| ||||||||  | ||||| |||||| |||||||||||||| | || |||||||| ||||||   |   ||||| | || ||    
T  23890 tactcttgtggcctttctcaccacacttgtatcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttccttt 23791  T
Q  249 gtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 335  Q
    ||||||||| |||||||| |||||||||||||| || ||||||||||| || | ||||||||| | ||||||||||| |||| ||||    
T  23790 gtcagcaggagcactgtaaggcttaggacgactctgttgtcccttacccctcctctcactcataatcttataatgagttttggtgtc 23704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 146 - 335
Target Start/End: Complemental strand, 33342 - 33153
Alignment:
Q  146 cgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacc 245  Q
    |||| |||||||||||||| || |||||||| |||||||| || ||| |||||||||||||| | || ||||||||||||||||| |  |||||  | ||    
T  33342 cgttgctcttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcc 33243  T
Q  246 cttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 335  Q
     ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  33242 tttgtcagcaggagcactgtatggtttaggacgactctgctgtcccttaccccttcgctcactcatcaccttgtaatgagctttggtgtc 33153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 63634 - 63377
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || ||||| ||||||||||| || || || ||  ||||||| || |||| ||| ||| |||| |||||||||||   ||| |    
T  63634 ctaaccttcttaggctgcgtacactgcgaactgatatgaccttcctcattatagttgtagcaaacaatatccccatgcttacaatcagctaaagtgtgtc 63535  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    | ||||||||||||||||| |||||||||||||| | ||| |||||| ||||||||||||||||| || |||||||| |||||||| || |||| |||||    
T  63534 ctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattactcttgtggcctttatcaccacacttgaaacaaacaatatcagtaggag 63436  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggg 258  Q
    |||||||| | || ||||||||||||||||| | ||| ||| |||||||||||||||||    
T  63435 catctctcctcttgggcctcctctcatcattcaatctttgcttacccttgtcagcaggg 63377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 329
Target Start/End: Complemental strand, 63372 - 63326
Alignment:
Q  283 tgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    |||||| |||| ||||| ||||||||||||||||| |||||||||||    
T  63372 tgctgtaccttgcctctacgctcactcatcaccttgtaatgagcttt 63326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 61 - 329
Target Start/End: Original strand, 1970 - 2236
Alignment:
Q  61 catacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtgg 159  Q
    ||||||||||| |||||||| |||||||||||    || || ||||| |||||||| ||||||||||||||||| | ||| ||| || ||||||||||||    
T  1970 catacaacatc-ccacgcttacaatcagctaaagtatgtcctttctgtccacacctaaagcacttcttctcatc-tcggtcacacacattactcttgtgg 2067  T
Q  160 cctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcagggg 259  Q
    |||||||| |||||||| || ||||  || |||| ||||||||||| | | || ||||||||||||||||| || |||||  |||| ||||||||||  |    
T  2068 cctttctcaccacacttgaagcaaataatttcagtaggagcatctcacctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcagaag 2167  T
Q  260 cactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    ||||  |||| || |||||||| | || |||||||||||| |||||||||||||| ||||||||||||||    
T  2168 cact-aacggtttcggacgactctactatcccttacctctgcgctcactcatcactttataatgagcttt 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 58 - 329
Target Start/End: Original strand, 5848 - 6119
Alignment:
Q  58 taacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgt 157  Q
    ||||| |||||||| ||||||||||||||||||||   ||| || ||||| ||||| ||||| |||||||||| |||      ||| || ||||||||||    
T  5848 taacaaacaacatccccacgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttatctcaatcacacacattactcttgt 5947  T
Q  158 ggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcagg 257  Q
    |||||||||| |||||||| ||| | ||  |||||  ||| ||||||||| |  | ||||||||||||||||| ||  ||||  | || |||||||||||    
T  5948 ggcctttctcaccacacttgaaatagacagtctcattaggggcatctctcctcctaggcctcctctcatcattcagcatctgttttcctttgtcagcagg 6047  T
Q  258 ggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
     ||||| ||||| || |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  6048 agcactatacggtttcggacgactctgctgacccttacctctgcgctcactcatcactttataatgagcttt 6119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 64 - 324
Target Start/End: Complemental strand, 43471 - 43211
Alignment:
Q  64 acaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggt-acaaacgttactcttgtggcct 162  Q
    |||||||| |||||||| |||||||||||   ||| || ||||| |||||||| ||||||||||||||||| | | | ||| || ||||||||||||||     
T  43471 acaacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatc-tcgatcacacacattactcttgtggccc 43373  T
Q  163 ttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcac 262  Q
    || || | |||||| ||||| || ||||||  ||||||||||||| | || ||||||||||||||||| || |||||  |||| |||| || ||| ||||    
T  43372 ttttcacgacacttgaaacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgttagaaggagcac 43273  T
Q  263 tgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatga 324  Q
    | ||| | || |||||||| || |||||||||||||| ||||||||||||||||| ||||||    
T  43272 tatacagttttggacgactctgttgtcccttacctctgcgctcactcatcaccttgtaatga 43211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 296
Target Start/End: Complemental strand, 897 - 623
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||| ||||| ||||| |||||| | || ||||| || || ||||  || |||||||| || ||||||||   ||| ||||| ||||||||||||||||    
T  897 cactgcgaactaatatgaccctctccatttcagttatagcagacaatgtccccacgcttacattcagctaaactgtgtcccttttgaccacacctgaagc 798  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    ||||| |||| || ||   |||||| || ||||||||||||||||| ||| ||||  ||||||| ||||||| ||||||||||||| | || ||||||||    
T  797 acttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccaaacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcct 698  T
Q  222 ctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacc 296  Q
     |||||||| |   ||||| | || ||||||  ||| |||||||| |||||||||||| | ||||||||||||||    
T  697 atcatcattcatcttctgctttcctttgtcaataggagcactgtaaggcttaggacgattctgctgtcccttacc 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 115 - 335
Target Start/End: Complemental strand, 1305 - 1085
Alignment:
Q  115 ctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcg 214  Q
    |||||||||||| |||||||  |   |||||| || ||||||||||||||||| ||||||||  ||||||| ||||||||||||||||||||| | || |    
T  1305 ctgaagcacttcctctcatctctaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgg 1206  T
Q  215 gcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcac 314  Q
    | ||||| |||||||| |   ||||| | || ||||||||||| |||||||| |||||||||||| | | ||||||||| || || | ||||||||| |     
T  1205 gtctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattcttctgtccctttcccctcctctcactcattat 1106  T
Q  315 cttataatgagctttgatgtc 335  Q
    ||| |||||||||||| ||||    
T  1105 cttgtaatgagctttggtgtc 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 775 - 657
Alignment:
Q  201 atctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt 300  Q
    ||||||| | || ||||||||||||||||| |||||||   |||| ||||||||||| ||||||||||| || |||||||| |||||||||||||||||     
T  775 atctctcctcttaggcctcctctcatcattcagtctctatttacctttgtcagcaggagcactgtacggtttcggacgactctgctgtcccttacctcta 676  T
Q  301 cgctcactcatcaccttat 319  Q
    | |||||||||||||||||    
T  675 cactcactcatcaccttat 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 335
Target Start/End: Original strand, 251816 - 252142
Alignment:
Q  9 cttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctga 108  Q
    ||||||| | || ||||||||||||||||| || |||||||||||||| || || ||||  || |||||||| || |||||||    ||| || ||||||    
T  251816 cttcggctgagtacactgtgaactgatatgaccttcttcgttgcagttttagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctga 251915  T
Q  109 ccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctca 208  Q
    |||||||| || || ||| |||||||  |   |||| | |  || ||||||||||| || |||||||| ||||| || |||||| || |||||||||||     
T  251916 ccacacctaaaacatttcctctcatctctaccacaagcatagcttttgtggcctttttcaccacacttgaaacacacaatctcaacaagagcatctctcc 252015  T
Q  209 tattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcact 308  Q
    | || |||||||| |||||||| |   | ||  | ||  || ||||||| |||||||| || ||||||||| | || ||||||||||| || | ||||||    
T  252016 tcttgggcctcctatcatcattcatcttatgttttcctgtggcagcaggagcactgtaaggtttaggacgattatgttgtcccttacccctcctctcact 252115  T
Q  309 catcaccttataatgagctttgatgtc 335  Q
    ||||||||| |||||||||||| ||||    
T  252116 catcaccttgtaatgagctttggtgtc 252142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 229827 - 229681
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| || ||||||||||||||||| ||||| || |||||||| ||||| |||||||||||  || |||| |||| ||| |||||    | ||||||     
T  229827 acaaacattgctcttgtggcctttctcaccacaattgaaacaaacaatctccgcaggagcatccttcttattaggccgcctatcatcgaccattctctgt 229728  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
     | ||||| |||||||||||||| || |||||||| ||||| |||||    
T  229727 ttgcccttatcagcaggggcactatagggcttagggcgactctgctg 229681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 335
Target Start/End: Complemental strand, 67124 - 66889
Alignment:
Q  100 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    ||||| |||||||||||||| || ||| ||||||   |   |||||| || |||||||||||||| || ||||||||| ||||||| ||||| | |||||    
T  67124 cccttttgaccacacctgaaacatttcctctcatgtctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaatctcggaaggag 67025  T
Q  200 catctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctct 299  Q
    |||||||| | || || ||||| |||||||| |   ||| | | || |||||| |||| |||||||| |||||||||||| | ||||||||||| || ||    
T  67024 catctctcctcttgggtctcctatcatcattcatcatctactttcctttgtcaacaggagcactgtaaggcttaggacgattctgctgtcccttgcccct 66925  T
Q  300 tcgctcactcatcaccttataatgagctttgatgtc 335  Q
     | ||||||||| | ||| |||||||||||| ||||    
T  66924 cctctcactcattatcttgtaatgagctttggtgtc 66889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 279
Target Start/End: Complemental strand, 5256 - 4982
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||||||| | || |||| |||||||||||| || ||||||||||||||||| || ||||  || |||||||| || |||||||    ||| || ||    
T  5256 ccttcttcggctgagtacactatgaactgatatgaccttcttcgttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtccttt 5157  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatct 204  Q
    ||||||||||||||| || ||| ||||||   |   |||| | ||  | ||||||||||| ||  ||| |||  ||||||| || |||||||||||||||    
T  5156 ctgaccacacctgaaacatttcctctcatttctaccacaagcattgtttttgtggcctttttcatcactcttttaacaaacaatttcagcaggagcatct 5057  T
Q  205 ctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacga 279  Q
    ||| | || |||||||| |||||||| |  |||||| | || ||||||||||| |||||||| || |||||||||    
T  5056 ctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcagcaggagcactgtaaggtttaggacga 4982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 148 - 330
Target Start/End: Complemental strand, 16577 - 16395
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||| ||||| ||||||||  | ||||| | ||||||||||| |||| || |  | ||||||||||||||||| |  || ||| |||| |    
T  16577 ttactcttgtggcccttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgcttacctt 16478  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
    | |||||||| ||||| || ||||| |||||||| ||||| | |||||| || ||||||||||| ||||| ||||||||||||    
T  16477 tatcagcaggagcactataaggctttggacgactctgctgactcttacccctccgctcactcataaccttgtaatgagctttg 16395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 148 - 326
Target Start/End: Complemental strand, 57582 - 57404
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| |||||||||||||||||  || |  |||| |||||| ||||||||||| || |  | ||||||||||||||||| | ||| ||| ||||||    
T  57582 ttactcttatggcctttctcgccacaagtatagtaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgcttaccct 57483  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    | |||||||| |||||||| ||||| |||||||||||||| || || ||| | |||||| |||  ||||| ||||||||    
T  57482 tatcagcaggagcactgtaaggctttggacgactttgctgacctttgcctttccgctcattcacaaccttgtaatgagc 57404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 12916 - 13081
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    ||||||||||| ||| | || ||||| ||||||||||| || ||||| || |||||||| || |||||||| |||||||| |||||||||||   ||| |    
T  12916 ctaaccttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtc 13015  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttct 166  Q
    | |||||||||||||| |||||||||||||| ||   |  ||| || |||||||||||||||||||    
T  13016 ctttctgaccacacctaaagcacttcttctcgtcacggtcacatacattactcttgtggcctttct 13081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 329
Target Start/End: Complemental strand, 30437 - 30113
Alignment:
Q  5 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccctt 104  Q
    ||||||||||| | || ||||  ||||||||||| || ||||| ||||||||||| |||||||  || |||  ||| || |||||||    ||| || ||    
T  30437 ccttcttcggctgagtacacttcgaactgatatgaccttcttctttgcagttgtagcatacaatgtccccattcttacattcagctagtttgtgtccttt 30338  T
Q  105 ctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatct 204  Q
    || ||||||||| || || ||| ||| |||  |   |||| | || |||||||||||||| || ||||||||| ||||||| ||||||||||||||||||    
T  30337 cttaccacacctaaaacatttcctcttatctctaccacaagcattgctcttgtggcctttttcaccacacttataacaaacaatctcagcaggagcatct 30238  T
Q  205 ctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgct 304  Q
     || | || |||||||| |||||||| |   ||||  | || ||||||||||| |||||||| || ||||||||| | || | ||||||||| || | ||    
T  30237 ttcctcttgggcctcctgtcatcattcatcttctgtttccctttgtcagcaggagcactgtaaggtttaggacgattctgttatcccttacccctcctct 30138  T
Q  305 cactcatcaccttataatgagcttt 329  Q
    ||||||| | ||  |||||||||||    
T  30137 cactcattatctagtaatgagcttt 30113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 49 - 176
Target Start/End: Original strand, 12034 - 12161
Alignment:
Q  49 ttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgt 148  Q
    |||||||||||||| | ||  || ||||||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||||  |   |||||| |    
T  12034 ttgcagttgtaacagataatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacat 12133  T
Q  149 tactcttgtggcctttctcgccacactt 176  Q
    ||||||||||||||||||| ||||||||    
T  12134 tactcttgtggcctttctcaccacactt 12161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 326
Target Start/End: Original strand, 7209 - 7387
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| ||||||||||| |||||  || | ||||| |||||| ||||||||||| || |  | ||||||||||||||||| | ||| ||| ||||||    
T  7209 ttactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgcttaccct 7308  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    | |||||||| |||||||| ||||| || ||||||||||| | ||| ||| | |||||| |||  ||||| ||||||||    
T  7309 tatcagcaggagcactgtaaggctttggtcgactttgctgactcttgcctttccgctcattcacaaccttgtaatgagc 7387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 326
Target Start/End: Original strand, 14339 - 14517
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| ||||||||||| |||||  || | ||||| |||||| ||||||||||| || |  | ||||||||||||||||| | ||| ||| ||||||    
T  14339 ttactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgcttaccct 14438  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    | |||||||| |||||||| ||||| || ||||||||||| | ||| ||| | |||||| |||  ||||| ||||||||    
T  14439 tatcagcaggagcactgtaaggctttggtcgactttgctgactcttgcctttccgctcattcacaaccttgtaatgagc 14517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 330
Target Start/End: Complemental strand, 3944 - 3678
Alignment:
Q  64 acaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctt 163  Q
    |||| ||||||||||||||| ||||||| |   || |||||||  ||||| | ||||||||||||||| ||     | || || ||||||||||||||      
T  3944 acaatatcaccacgcttgcattcagctatcgcatgccccttctttccacatcggaagcacttcttctcctcaccattgcagacattactcttgtggcccc 3845  T
Q  164 tctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcact 263  Q
    |||||||||||||  | ||||| |||||| ||| | |||||||| | || || |||||||||||||| | ||| ||  | |||||||||||||| |||||    
T  3844 tctcgccacacttgtagcaaacaatctcaacagaaacatctctcctcttaggtctcctctcatcattcaatctttgtttccccttgtcagcaggagcact 3745  T
Q  264 gtacggcttaggacgactttgctgtcc-ct-tacctcttcgctcactcatcaccttataatgagctttg 330  Q
     || ||||||||||||| |||||| || || | ||||||  ||||||||| ||||||||||| ||||||    
T  3744 atagggcttaggacgaccttgctggcctctgttcctctt--ctcactcataaccttataatgtgctttg 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 7754 - 7696
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 199  Q
    |||||| |||||||||||||||||| ||||||| || |||||||| || || |||||||    
T  7754 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggag 7696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 30123 - 30331
Alignment:
Q  1 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgac 100  Q
    |||||||||||||||   |  ||||| ||||||||||| |||||| | |||||||||||||| ||||  || |||||||| || |||||||    ||| |    
T  30123 ctaaccttcttcggctcaggacactgcgaactgatatgaccctctccattgcagttgtaacagacaatgtccccacgcttacattcagctaggttgtgtc 30222  T
Q  101 ccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagc 200  Q
      ||||||||||||||||| |||||| |||||||  |   ||||||||| || |||||||||||||| ||||||||  ||||||| |||| || | ||||    
T  30223 ttttctgaccacacctgaatcacttcctctcatctctaccacaaacgttgcttttgtggcctttctcaccacacttgtaacaaacaatcttagaaagagc 30322  T
Q  201 atctctcat 209  Q
    ||| |||||    
T  30323 atcactcat 30331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 335
Target Start/End: Original strand, 30345 - 30433
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 335  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||| || || | |||||||||   ||| |||||||||||| ||||    
T  30345 ttgtcagcaggagcactgtaaggcttaggacgactctgctgtcccttgcccctcctctcactcattgtcttgtaatgagctttggtgtc 30433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 294
Target Start/End: Original strand, 36720 - 36980
Alignment:
Q  34 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcat 133  Q
    ||||| |||||||| ||||| ||  | || |||| ||||| |||||||||||||||||||   ||||||||||  ||||||| ||| || |||||| | |    
T  36720 atatgaccctcttccttgcaattaaagcacacaatatcactacgcttgcaatcagctaacgtatgacccttcttgccacaccggaaacatttcttcacct 36819  T
Q  134 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaag 233  Q
    |||  | |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||  || | || |||| ||| |||||    |     
T  36820 cctctggacaaacattgctcttgtggcctttctcaccacaattgaaacagacgatctccgcaggagcatccttcttcttaggccgcctatcatcgaccat 36919  T
Q  234 tctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
    ||||||  | ||||| |||||||||||||| || ||||||||  |||| ||||| ||||||    
T  36920 tctctgtttgcccttatcagcaggggcactatagggcttagggagactctgctggccctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 330
Target Start/End: Original strand, 18181 - 18363
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| ||||||||||| |||||  |  | ||||| |||||||||| ||||||| || |  | ||||||||||||||||||| ||| ||| ||||||    
T  18181 ttactcttatggcctttctcaccacaagtgtagcaaacaatctcagcagtagcatctttctttcttggcctcctctcatcattaactctttgcttaccct 18280  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
    | |||||||| ||| |||| ||||| |||||||||| ||| || |||||| | | |||| |||   |||| ||||||||||||    
T  18281 tatcagcaggagcattgtaaggctttggacgacttttctgacctttacctttcctctcattcacagccttgtaatgagctttg 18363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 330
Target Start/End: Original strand, 2326 - 2517
Alignment:
Q  139 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 238  Q
    |||||| ||||||||||||| |||||||| |||||    |||||||  |||||||||||   |||| || | || || |||||||||||||| |  ||||    
T  2326 gtacaagcgttactcttgtgacctttctctccacataggaaacaaagaatctcagcaggtatatctttcttcttgggtctcctctcatcattcaccctct 2425  T
Q  239 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttg 330  Q
    || ||||||| ||||| || |||||||| |||||||||||||| | ||    |||||| || |||||| |||| | ||||||||||||||||    
T  2426 gcttacccttatcagccggagcactgtaaggcttaggacgactctactagttcttacccctccgctcattcatgatcttataatgagctttg 2517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 139 - 329
Target Start/End: Original strand, 26679 - 26869
Alignment:
Q  139 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 238  Q
    |||||| | |||||||||||||||||||| |||||  || | ||||| | |||||||| || |||| || |  | ||||||||||||||||| | ||| |    
T  26679 gtacaagcattactcttgtggcctttctcaccacaagtatagcaaacaacctcagcagtagtatctttctttctaggcctcctctcatcattcactcttt 26778  T
Q  239 gcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagcttt 329  Q
    || |||||||  ||||||| |||||||| ||||| |||||| ||| ||| | ||||||| ||| ||||  ||  ||||| |||||||||||    
T  26779 gcttacccttaccagcaggagcactgtaaggctttggacgaatttactgactcttaccttttctctcatgcacaaccttgtaatgagcttt 26869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 36785 - 36733
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||| ||||||||||||||||| |||||||| || |||||||||||||||||    
T  36785 ctcttatggcctttctcgccacaattaaaacagacaatctcagcaggagcatc 36733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 13923 - 13835
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 335  Q
    ||||||||||| |||||||| |||||||||||| | |||||||||||||| || | ||||||||| | ||| |||||||||||| ||||    
T  13923 ttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttttaatgagctttggtgtc 13835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 182
Target Start/End: Complemental strand, 29010 - 28862
Alignment:
Q  34 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcat 133  Q
    ||||| |||||| | ||||||||| ||||  ||| ||||||| ||||||| ||||||||   |||||||||||  ||||||| ||| || |||||  | |    
T  29010 atatgaccctctactttgcagttgaaacacgcaatatcaccatgcttgcattcagctaatgtgtgacccttcttgccacaccggaaacatttctttacct 28911  T
Q  134 ccttggtacaaacgttactcttgtggcctttctcgccacacttaaaaca 182  Q
    |||| | |||||| || ||||||||||||||||||||||| || |||||    
T  28910 ccttaggacaaacattgctcttgtggcctttctcgccacaattgaaaca 28862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 17686 - 17762
Alignment:
Q  259 gcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagctttgatgtc 335  Q
    |||||||| |||||||||||||| |||||||||||||| || | ||||||||| | |||||||||||||||| ||||    
T  17686 gcactgtaaggcttaggacgactctgctgtcccttacccctcctctcactcattatcttataatgagctttggtgtc 17762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 1149 - 1367
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||||||||||| ||| || | |||||  || ||| | || |||| ||||||||||||||| ||||||| |   || |||||||  ||||| | |||||    
T  1149 cactgtgaactgagatgaccttattcgtcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgtatgccccttctttccacatcggaagc 1248  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcct 221  Q
    |||||||||| ||     | ||||| |||||||||||||| ||||| ||||||||  ||||||| ||||||| |||| |||| ||  | || || |||||    
T  1249 acttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcct 1348  T
Q  222 ctcatcattaagtctctgc 240  Q
    ||||||||| | |||||||    
T  1349 ctcatcattcaatctctgc 1367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 326
Target Start/End: Original strand, 7908 - 8071
Alignment:
Q  163 ttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcac 262  Q
    ||||| ||||||||  ||||||| ||||||| |||| |||| ||  | || || |||||||||||||| | |||||||   || |||||| |||| ||||    
T  7908 ttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgctctcctttgtcaacaggagcac 8007  T
Q  263 tgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    |||| ||||| ||||||| |||||| |||||    || ||||||||| | ||||||||||||||    
T  8008 tgtagggcttcggacgaccttgctgacccttgttcctccgctcactcctaaccttataatgagc 8071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 20 - 93
Alignment:
Q  214 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    ||||||||||||||||| | ||| ||| ||||||| |||||||| |||||||| ||||| ||||||||||||||    
T  20 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgtaaggctttggacgactttgctg 93  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 32218 - 32270
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  32218 ctcttgtggcctttctcgccacaattaaaacagacaatctcagcaggagcatc 32270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 293
Target Start/End: Complemental strand, 10214 - 10062
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||||||| ||||| | || |||||||| || || |||||||||||  || | || |||| ||| |||||    | |||||||    
T  10214 acaaacattactcttgtggcctttcccgccatagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccattctctgc 10115  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
     | ||||| |||||| ||||||| || || ||||| ||||| ||||| |||||    
T  10114 ttgcccttatcagcaagggcactataaggtttagggcgactctgctgaccctt 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 293
Target Start/End: Complemental strand, 12869 - 12717
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||||||| ||||| | || |||||||| || || |||||||||||  || | || |||| ||| |||||    | |||||||    
T  12869 acaaacattactcttgtggcctttcccgccatagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccattctctgc 12770  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
     | ||||| |||||| ||||||| || || ||||| ||||| ||||| |||||    
T  12769 ttgcccttatcagcaagggcactataaggtttagggcgactctgctgaccctt 12717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 329
Target Start/End: Original strand, 468 - 583
Alignment:
Q  214 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatca 313  Q
    ||||||||||||||||| | ||| ||  ||||||| |||||||| || ||||| ||||| || ||||||||||| ||||||||| | | ||||||||       
T  468 ggcctcctctcatcattcactctttgtttacccttatcagcaggagcgctgtaaggctttgggcgactttgctgacccttacctttcctctcactcacag 567  T
Q  314 ccttataatgagcttt 329  Q
    |||| |||||||||||    
T  568 ccttgtaatgagcttt 583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 1832 - 1693
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| |||||||||||||||||   | | || || ||||||  |||||||||| || |  | ||||||||||||||||||| ||| ||  | ||||    
T  1832 ttactcttatggcctttctcgccacaagcatagcacacaatctcattaggagcatctttctttctaggcctcctctcatcattaactctttgttttccct 1733  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| ||||| |||||||| |||||    
T  1732 tatcagcaggagcactgtaaggctttggacgactctgctg 1693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 10803 - 10846
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  10803 tcagcaggggcactgtacggcttaggacgactctgctgtccctt 10846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 4696 - 4557
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| |||||||||||||||||   | | || || ||||||  |||||||||| || |  | ||||||||||||||||||| ||| ||  | ||||    
T  4696 ttactcttatggcctttctcgccacaagcatagcacacaatctcattaggagcatctttctttctaggcctcctctcatcattaactctttgttttccct 4597  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| ||||| |||||||| |||||    
T  4596 tatcagcaggagcactgtaaggctttggacgactctgctg 4557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 12151 - 12282
Alignment:
Q  3 aaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgaccc 102  Q
    ||||||||| ||| | || ||||||||||| ||||| || ||||| || |||||||| || |||| ||| |||| |||||||||||| ||   ||| ||     
T  12151 aaccttcttaggctgcgtacactgtgaactaatatgtccttcttcattacagttgtagcaaacaatatccccacacttgcaatcagccaatgtgtgtcct 12250  T
Q  103 ttctgaccacacctgaagcacttcttctcatc 134  Q
    ||||| ||||| ||||| ||||||||||||||    
T  12251 ttctgtccacatctgaaacacttcttctcatc 12282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 289
Target Start/End: Original strand, 12322 - 12421
Alignment:
Q  190 tcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtc 289  Q
    |||| ||||||||||||| | |  ||||||||||||||||| || |||||  || | ||||||||||| ||||| ||||  || |||||||| |||||||    
T  12322 tcagtaggagcatctctcctctaaggcctcctctcatcattcagcctctgtttatctttgtcagcaggagcactatacgatttcggacgactctgctgtc 12421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 287
Target Start/End: Original strand, 48066 - 48205
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| || |  | || | ||||||||||   | ||||||  ||||||    
T  48066 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctgtttaccct 48165  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  48166 tatcagcaggagcactgtaaggcttaggacgactctgctg 48205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 55439 - 55300
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || | || || |||||| ||||||||||| || |  | || | ||||||||||   | ||||||  ||||||    
T  55439 ttactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctgtttaccct 55340  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| | |||||||||||| |||||    
T  55339 tatcagcaggagcactgtaagtcttaggacgactctgctg 55300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 23266 - 23127
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| ||||||||||| ||| |  || ||||||| | |||||||| ||  ||| || |  | ||||| ||||||||||| | ||||||  ||||||    
T  23266 ttactcttatggcctttctcaccaaaagtataacaaacaacctcagcagtagtctctttctttctaggccttctctcatcattcaatctctgtttaccct 23167  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| |||||||||||| |||||||    
T  23166 tatcagcaggagcactgtaaggcttaggacgattttgctg 23127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 275
Target Start/End: Complemental strand, 9328 - 9192
Alignment:
Q  139 gtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctct 238  Q
    |||||| | |||||||||||||| ||||| |||||  || | ||||| ||||||| || || |||| || |  | ||||||||||||||||| | ||| |    
T  9328 gtacaagcattactcttgtggcccttctcaccacaagtatagcaaacaatctcagtagtagtatctttctttctaggcctcctctcatcattcaatcttt 9229  T
Q  239 gcctacccttgtcagcaggggcactgtacggcttagg 275  Q
    |  ||||||| |||||||| ||||| || ||||||||    
T  9228 gtttacccttatcagcaggagcactataaggcttagg 9192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 287
Target Start/End: Original strand, 104562 - 104701
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || | ||||| |||||| ||||||||||| || |  | |||| |||||||||| | | ||||||  | ||||    
T  104562 ttactcttgtggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggccgcctctcatcaatcattctctgttttccct 104661  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| ||||| || ||||| |||||||| |||||    
T  104662 tatcagcaggagcactataaggctttggacgactctgctg 104701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 148 - 326
Target Start/End: Complemental strand, 216388 - 216210
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| ||||||||||| |||||  |  | ||||| |||||||||  | ||||| || |  | |||||||| | |||||| | ||| ||| ||||||    
T  216388 ttactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacatcatctttctttctaggcctccttttatcattcaatctttgcttaccct 216289  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatcaccttataatgagc 326  Q
    | |||||||| |||||||| ||||| |||||||||||||| ||||| ||| | | |||| |||  ||||| ||||||||    
T  216288 tatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatgagc 216210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 294
Target Start/End: Original strand, 17489 - 17642
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||||||||||||||| ||||| || ||||| || ||||| |||||||||||  || | || |||| ||| |||||    | ||| ||     
T  17489 acaaacattactcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctatgt 17588  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||| ||||||    
T  17589 ttgcccttatcagcaggggcactatagggcttagggcgactctgctggccctta 17642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 3859 - 3902
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  3859 tcagcgggggcactgtacggcttaggacgactctgctgtccctt 3902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 202
Target Start/End: Original strand, 324 - 504
Alignment:
Q  22 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagc 121  Q
    ||||| ||||| ||||| |||||||| ||||| ||| | || |||| ||||  | ||||||||||||||||    |||||||||| |||||||  ||| |    
T  324 cactgagaactaatatgaccctcttctttgcaattgaagcacacaatatcattatgcttgcaatcagctaatgcatgacccttcttaccacactggaaac 423  T
Q  122 acttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcat 202  Q
    |  | ||  | || || | | |||| || ||||||||||||||||| ||||| |||||||| || ||||||||||||||||    
T  424 atctttttacctctttcggaaaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcat 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 285
Target Start/End: Original strand, 18935 - 19123
Alignment:
Q  97 tgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcag 196  Q
    |||||||||| |||||| |  || ||| ||||| |||||  || |||| | |||||||||||||||||||| |||||  || | || || || ||| |||    
T  18935 tgacccttcttaccacagcgaaaacacctcttcacatccccgggacaagcattactcttgtggcctttctcaccacaagtatagcagacaatttcaacag 19034  T
Q  197 gagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgc 285  Q
    |||| ||| || | || || | ||| ||||||   | ||||||  ||||||| |||||||| |||||||| ||||||||||||||||||    
T  19035 gagcttctttctttttggggcgcctatcatcaaccattctctgtttacccttatcagcaggagcactgtaaggcttaggacgactttgc 19123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 336
Target Start/End: Original strand, 117 - 312
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| || ||||||||||||||||| ||||| || ||||| || ||||| |||||||||||  || | || |||| ||| |||||    | ||||||     
T  117 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgt 216  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctctt-cgctcactcatcaccttataatgagctttgatgtcc 336  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||| | ||||||  |||| |||||| |||  ||||| |||||||||||| |||||    
T  217 tttcccttatcagcaggggcactatagggcttagggcgactctgccggccctta-gtcttccgctcattcacaaccttgtaatgagctttggtgtcc 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 293
Target Start/End: Original strand, 5327 - 5479
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| |||||||| ||||| ||||||||||| || |||||||| ||||| |||||||||||  || | || |||| ||| |||||    | ||||||     
T  5327 acaaacattactcttatggcccttctcgccacagttgaaacaaacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgt 5426  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
     | ||||| |||||| ||||||| || |||||||| ||||| ||||| |||||    
T  5427 ttgcccttatcagcaagggcactataaggcttagggcgactctgctggccctt 5479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 379 - 431
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||| ||||    
T  379 ctcttgtggcctttctcaccacaattaaaacaaacaatctcagcaggaacatc 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 203
Target Start/End: Original strand, 107 - 270
Alignment:
Q  40 ccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttgg 139  Q
    |||||||| || |||||| | || |||| ||||  |||||||||||||||||  |  |||||||||| |||||||| ||  || |||||    || |  |    
T  107 ccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatctcttcag 206  T
Q  140 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
     |||||| |||||||||||||||||| ||||||| || |||||||| || || |||||||||||    
T  207 gacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 13200 - 13037
Alignment:
Q  40 ccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttgg 139  Q
    |||||||| || |||||| | || |||| ||||  |||||||||||||||||  |  |||||||||| |||||||| ||  || |||||    || |  |    
T  13200 ccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatctcttcag 13101  T
Q  140 tacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
     |||||| |||||||||||||||||| ||||||| || |||||||| || || |||||||||||    
T  13100 gacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatc 13037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 21944 - 21995
Alignment:
Q  152 tcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  21944 tcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 21995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 37368 - 37419
Alignment:
Q  152 tcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  37368 tcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatc 37419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 293
Target Start/End: Original strand, 11891 - 11930
Alignment:
Q  254 caggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  11891 caggggcactgtacggcttaggacgactctgctgtccctt 11930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 293
Target Start/End: Original strand, 21419 - 21458
Alignment:
Q  254 caggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  21419 caggggcactgtacggcttaggacgactctgctgtccctt 21458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 55439 - 55479
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtcc 290  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  55439 tcagcaggggcactgtacggcttaggacgactctgttgtcc 55479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 455 - 393
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| || ||||||||||||||||||||||| || |||||||| ||||| | |||||||||    
T  455 acaaacattgctcttgtggcctttctcgccacaattgaaacaaacaatctccgtaggagcatc 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 11428 - 11542
Alignment:
Q  212 tcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcat 311  Q
    |||| |||||||||||||||| ||  ||  | ||||| |||||||||||||| || ||||| |||||||||||||| ||||| ||| | | |||| |||     
T  11428 tcggtctcctctcatcattaactcgttgtttgcccttatcagcaggggcactataaggcttgggacgactttgctgacccttgcctttcctctcattcac 11527  T
Q  312 caccttataatgagc 326  Q
     ||||| ||||||||    
T  11528 aaccttgtaatgagc 11542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 281
Target Start/End: Original strand, 263 - 393
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgt 250  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||  || | || ||||  || || ||    | ||||||  | ||||| |    
T  263 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttaggccgtctatcctcgaccattctctgtttgcccttat 362  T
Q  251 cagcaggggcactgtacggcttaggacgact 281  Q
    |||||||||||||||||||||||||||||||    
T  363 cagcaggggcactgtacggcttaggacgact 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 14007 - 13945
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||||| |||||||||||    
T  14007 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcatc 13945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 22679 - 22721
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtc 289  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  22679 ttgtcagcgggggcactgtacggcttaggacgactctgctgtc 22721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 7668 - 7710
Alignment:
Q  247 ttgtcagcaggggcactgtacggcttaggacgactttgctgtc 289  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  7668 ttgtcagcgggggcactgtacggcttaggacgactctgctgtc 7710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 294
Target Start/End: Original strand, 1 - 218
Alignment:
Q  77 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 176  Q
    ||||||||||||||||    ||||||||||  ||||||| ||| || |||||| | ||||| | |||||| || || |||||||||||||| |||||  |    
T  1 gcttgcaatcagctaaagtatgacccttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccacaaat 100  T
Q  177 aaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttagga 276  Q
     ||||| || ||||| ||| |||||||  || | || |||| ||| |||||   ||  ||||   | ||||| |||||||||||||| || ||||||||     
T  101 gaaacagacaatctccgcaagagcatccttcttcttaggccgcctatcatcgacaatactctatttgcccttatcagcaggggcactatagggcttaggg 200  T
Q  277 cgactttgctgtccctta 294  Q
    ||||| ||||| ||||||    
T  201 cgactctgctggccctta 218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 281
Target Start/End: Original strand, 1318 - 1451
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || ||||||| |||||| ||||||| ||  || |  |||| | ||| ||||||   | ||||||  ||||||    
T  1318 ttactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcttccatctttctcgggcgcctatcatcaaccattctctgtttaccct 1417  T
Q  248 tgtcagcaggggcactgtacggcttaggacgact 281  Q
    | |||||||| |||||||| |||||||| |||||    
T  1418 tatcagcaggagcactgtaaggcttagggcgact 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 14881 - 14808
Alignment:
Q  214 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    ||||| || |||||||||| ||| | | ||||||| |||||||| |||||||| |||||||||||| |||||||    
T  14881 ggccttctttcatcattaaatcttttcttacccttatcagcaggagcactgtaaggcttaggacgattttgctg 14808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 285
Target Start/End: Original strand, 15746 - 15883
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||| ||||||||||| |||||  |  | ||||| |||||||||  | ||||| || |  | |||| |||||||||||||| ||| ||  | ||||    
T  15746 ttactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacaacatctttcttgctgggccgcctctcatcattaactctttgtttgccct 15845  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgc 285  Q
    | |||||||| |||||||| ||||| ||||||||||||    
T  15846 tatcagcaggagcactgtaaggctttggacgactttgc 15883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 294
Target Start/End: Complemental strand, 15016 - 14863
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgc 240  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||||| | |||||||||  || | || |||  ||| |||||    | ||||||     
T  15016 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatccttcttcttaggctgcctatcatcgaccattctctgt 14917  T
Q  241 ctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
     | ||||| |||||||||||||| || |||||||| ||||| ||||| ||||||    
T  14916 ttgcccttatcagcaggggcactatagggcttagggcgactctgctggccctta 14863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 11331 - 11269
Alignment:
Q  141 acaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||| || ||||||||||||||||| ||||| |||||||| || ||||| | |||||||||    
T  11331 acaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcatc 11269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 1545 - 1629
Alignment:
Q  77 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcc 161  Q
    ||||||| ||||| ||||| ||||| |||||||| || ||||| || ||||||||||| | ||| ||| | ||||||||||||||    
T  1545 gcttgcattcagccaacaaatgaccattctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcc 1629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 287
Target Start/End: Complemental strand, 7622 - 7486
Alignment:
Q  151 ctcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgt 250  Q
    ||||||||||||||||| ||||| ||||| || || |||||||||||| ||||  || | || |||| ||| || ||    | ||||||  | ||||| |    
T  7622 ctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttaggccgcctatcttcgaccattctctgtttgcccttat 7523  T
Q  251 cagcaggggcactgtacggcttaggacgactttgctg 287  Q
    |||||||||||||||| |||||||| ||||| |||||    
T  7522 cagcaggggcactgtaaggcttagggcgactctgctg 7486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 346 - 291
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||||||||||||||||| |||||  ||||||| || ||||| |||||||||||    
T  346 ttactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 287
Target Start/End: Original strand, 353 - 492
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || | || || |||||  || |||||||| || | || |||| ||| ||||||   | |||| |  ||||||    
T  353 ttactcttgtggcctttctcaccacaagtatagcagacaatctccacaagagcatctttcttcttaggccacctatcatcaaccattctcggtttaccct 452  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  453 tatcagcaggagcactgtaaggcttaggacgactctgctg 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 287
Target Start/End: Original strand, 4770 - 4909
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    |||||||||||||||||||| |||||  || | || || |||||  || |||||||| || | || |||| ||| ||||||   | |||| |  ||||||    
T  4770 ttactcttgtggcctttctcaccacaagtatagcagacaatctccacaagagcatctttcttcttaggccacctatcatcaaccattctcggtttaccct 4869  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  4870 tatcagcaggagcactgtaaggcttaggacgactctgctg 4909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 203
Target Start/End: Complemental strand, 9411 - 9356
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||||||||||||||||| |||||  ||||||| || ||||| |||||||||||    
T  9411 ttactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatc 9356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 13376 - 13297
Alignment:
Q  214 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    ||||||||||||||||| | ||| ||| ||||||| |||||||| |||||| | | ||| |||| ||||||||| |||||    
T  13376 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgcaagactttggacaactttgctgaccctt 13297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 287
Target Start/End: Complemental strand, 4523 - 4384
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctaccct 247  Q
    ||||||||||||||||| || |||||  || | || || |||||  ||||||||||| || | || |||| ||| ||||||   | ||||||  || |||    
T  4523 ttactcttgtggcctttttcaccacaagtatagcagacaatctccacaggagcatctttcttcttaggccgcctatcatcaaccattctctgtttatcct 4424  T
Q  248 tgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    | |||||||| |||||||| |||||||||||||| |||||    
T  4423 tatcagcaggagcactgtaaggcttaggacgactctgctg 4384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 14420 - 14475
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatc 203  Q
    |||||||| |||||||||||||||||  ||||||| || ||||| |||||||||||    
T  14420 ttactcttatggcctttctcgccacaagtaaaacagacaatctctgcaggagcatc 14475  T

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Target: scaffold0412 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 15618 - 15492
Alignment:
Q  77 gcttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacactt 176  Q
    ||||||||||||||||    ||||||||||  ||||||| ||| ||||||||  | ||||  | |||||  || ||||||||||||||||| ||||| ||    
T  15618 gcttgcaatcagctaatgtatgacccttcttgccacaccggaaacacttctttgcctcctctggacaaaaattgctcttgtggcctttctcaccacaatt 15519  T
Q  177 aaaacaaactatctcagcaggagcatc 203  Q
     ||||| |  ||||| |||||||||||    
T  15518 gaaacagatgatctccgcaggagcatc 15492  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 30981 - 30923
Alignment:
Q  148 ttactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggagcatctct 206  Q
    |||||||||||||| ||||| ||||||||  | ||||| |||||||||||| |||||||    
T  30981 ttactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctct 30923  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 281
Target Start/End: Complemental strand, 40436 - 40342
Alignment:
Q  187 atctcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgact 281  Q
    |||||||||||||||||| || |  |||| | ||| ||||||   | ||||||  | ||||| ||||||||||||||||| ||||||||||||||    
T  40436 atctcagcaggagcatctttctttctcgggcgcctatcatcaaccactctctgttttcccttatcagcaggggcactgtaaggcttaggacgact 40342  T

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Target: scaffold0679 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Complemental strand, 850 - 821
Alignment:
Q  301 cgctcactcatcaccttataatgagctttg 330  Q
    ||||||||||||||||||||||||||||||    
T  850 cgctcactcatcaccttataatgagctttg 821  T

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Target: scaffold0278 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 3929 - 4026
Alignment:
Q  190 tcagcaggagcatctctcatattcggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctg 287  Q
    ||||||||||||||| || | || |||| ||| ||||||   | ||||||  ||||||| |||||||| |||||||| | |||||||||||| |||||    
T  3929 tcagcaggagcatctttcttcttaggccgcctatcatcaaccattctctgtttacccttatcagcaggagcactgtaagacttaggacgactctgctg 4026  T

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Target: scaffold0259 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 8699 - 8736
Alignment:
Q  256 ggggcactgtacggcttaggacgactttgctgtccctt 293  Q
    |||||||||||||||||||||||||| || ||||||||    
T  8699 ggggcactgtacggcttaggacgactctgatgtccctt 8736  T

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Target: scaffold0198 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 30725 - 30766
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccc 291  Q
    ||||||||||||||||||||||||||| |||| || ||||||    
T  30725 tcagcaggggcactgtacggcttaggatgactctgttgtccc 30766  T

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Target: scaffold0098 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Original strand, 25949 - 25978
Alignment:
Q  301 cgctcactcatcaccttataatgagctttg 330  Q
    ||||||||||||||||||||||||||||||    
T  25949 cgctcactcatcaccttataatgagctttg 25978  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 17851 - 17807
Alignment:
Q  242 tacccttgtcagcaggggcactgtacggcttaggacgactttgct 286  Q
    ||||||| |||||||| |||||||| |||||||||||||| ||||    
T  17851 tacccttatcagcaggagcactgtaaggcttaggacgactctgct 17807  T

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Target: scaffold0342 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 326
Target Start/End: Complemental strand, 14167 - 14055
Alignment:
Q  214 ggcctcctctcatcattaagtctctgcctacccttgtcagcaggggcactgtacggcttaggacgactttgctgtcccttacctcttcgctcactcatca 313  Q
    |||||| |||||||||| | ||| ||  | ||||| ||| |||| |||||||| ||||| |||||||||||||| ||||| ||| | | |||| |||  |    
T  14167 ggcctcttctcatcatttattctttgttttcccttatcatcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaa 14068  T
Q  314 ccttataatgagc 326  Q
    |||| ||||||||    
T  14067 ccttgtaatgagc 14055  T

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Target: scaffold0319 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 6938 - 6982
Alignment:
Q  250 tcagcaggggcactgtacggcttaggacgactttgctgtccctta 294  Q
    ||||||||||||||||| |||||||| ||||| ||||| ||||||    
T  6938 tcagcaggggcactgtaaggcttagggcgactctgctgaccctta 6982  T

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Target: scaffold0305 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 3131 - 3255
Alignment:
Q  79 ttgcaatcagctaacaagtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaa 178  Q
    ||||||||||||||   |||||||||||  ||||||| ||| ||||||| | | ||||  | |||| |  ||||||||||||||||||| ||||| || |    
T  3131 ttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttctccacctcctcaggacaagcagtactcttgtggcctttctcaccacaattga 3230  T
Q  179 aacaaactatctcagcaggagcatc 203  Q
    || ||   |||||||||||| ||||    
T  3231 aagaagtaatctcagcaggaacatc 3255  T

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