View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8226_high_14 (Length: 481)

Name: NF8226_high_14
Description: NF8226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8226_high_14
NF8226_high_14
[»] chr8 (43 HSPs)
chr8 (201-472)||(37681256-37681532)
chr8 (18-157)||(37681576-37681715)
chr8 (18-157)||(38249195-38249335)
chr8 (291-446)||(45155030-45155190)
chr8 (330-445)||(36710400-36710519)
chr8 (308-445)||(14589387-14589526)
chr8 (308-447)||(31986499-31986638)
chr8 (293-380)||(18824224-18824315)
chr8 (330-446)||(31981594-31981710)
chr8 (293-436)||(25231283-25231429)
chr8 (291-380)||(16953973-16954066)
chr8 (330-445)||(5964490-5964605)
chr8 (292-378)||(25591310-25591400)
chr8 (330-437)||(30645719-30645826)
chr8 (330-445)||(33883114-33883231)
chr8 (292-446)||(4868450-4868605)
chr8 (293-380)||(18825717-18825808)
chr8 (291-340)||(38248270-38248319)
chr8 (330-437)||(14188405-14188512)
chr8 (325-380)||(18721115-18721173)
chr8 (291-446)||(23644018-23644175)
chr8 (386-445)||(41778738-41778799)
chr8 (324-380)||(5584261-5584320)
chr8 (352-446)||(12583283-12583376)
chr8 (395-448)||(13097223-13097278)
chr8 (32-103)||(14589707-14589779)
chr8 (330-445)||(18695744-18695859)
chr8 (32-103)||(33878129-33878201)
chr8 (255-294)||(13196334-13196373)
chr8 (41-103)||(22174782-22174845)
chr8 (255-294)||(33419138-33419177)
chr8 (331-380)||(10664190-10664242)
chr8 (200-242)||(38249090-38249132)
chr8 (386-445)||(44008478-44008539)
chr8 (388-446)||(14349297-14349357)
chr8 (32-96)||(18722208-18722273)
chr8 (32-96)||(25592398-25592463)
chr8 (32-96)||(25595583-25595648)
chr8 (239-272)||(38249048-38249081)
chr8 (350-445)||(41836202-41836297)
chr8 (325-380)||(5980121-5980179)
chr8 (325-376)||(43681707-43681761)
chr8 (32-103)||(43682688-43682760)
[»] chr6 (51 HSPs)
chr6 (18-157)||(6512419-6512559)
chr6 (20-157)||(28112587-28112725)
chr6 (291-442)||(14281284-14281439)
chr6 (300-446)||(5260020-5260170)
chr6 (18-157)||(14282320-14282460)
chr6 (291-445)||(28111568-28111726)
chr6 (291-435)||(2372534-2372686)
chr6 (291-445)||(28107516-28107674)
chr6 (324-446)||(6514231-6514356)
chr6 (18-157)||(5259100-5259243)
chr6 (291-437)||(13005394-13005544)
chr6 (292-446)||(14966426-14966580)
chr6 (291-411)||(2846507-2846631)
chr6 (291-380)||(5737891-5737984)
chr6 (291-380)||(9954164-9954257)
chr6 (292-445)||(14969906-14970059)
chr6 (292-445)||(24371419-24371574)
chr6 (352-447)||(5617974-5618066)
chr6 (255-294)||(6512743-6512782)
chr6 (385-445)||(16731634-16731696)
chr6 (385-445)||(20527156-20527218)
chr6 (291-374)||(2379432-2379519)
chr6 (385-447)||(2773154-2773218)
chr6 (291-380)||(1125564-1125658)
chr6 (32-103)||(31071531-31071603)
chr6 (330-437)||(34502586-34502693)
chr6 (255-294)||(5259427-5259466)
chr6 (255-294)||(14282118-14282157)
chr6 (385-445)||(20189181-20189243)
chr6 (385-445)||(22146748-22146810)
chr6 (200-242)||(6512622-6512664)
chr6 (200-242)||(14282235-14282277)
chr6 (352-445)||(10290251-10290344)
chr6 (385-439)||(12983381-12983437)
chr6 (325-445)||(23008295-23008417)
chr6 (32-96)||(23389051-23389116)
chr6 (325-445)||(23779947-23780069)
chr6 (385-445)||(9313537-9313599)
chr6 (255-294)||(28108431-28108470)
chr6 (385-445)||(28118138-28118200)
chr6 (200-242)||(5259306-5259348)
chr6 (347-445)||(13095489-13095584)
chr6 (385-444)||(15578667-15578728)
chr6 (401-437)||(11402571-11402608)
chr6 (385-439)||(12980494-12980550)
chr6 (32-96)||(23379712-23379777)
chr6 (291-379)||(3596609-3596703)
chr6 (239-271)||(6512674-6512706)
chr6 (17-84)||(13022191-13022259)
chr6 (254-294)||(13942053-13942093)
chr6 (325-380)||(23848018-23848076)
[»] scaffold2073 (1 HSPs)
scaffold2073 (291-446)||(626-786)
[»] chr3 (46 HSPs)
chr3 (291-445)||(32287067-32287225)
chr3 (330-446)||(4250633-4250748)
chr3 (291-380)||(539112-539205)
chr3 (292-437)||(10963603-10963752)
chr3 (330-437)||(10960134-10960245)
chr3 (330-446)||(42354168-42354284)
chr3 (292-446)||(2279385-2279539)
chr3 (291-380)||(12541115-12541208)
chr3 (292-427)||(10967112-10967251)
chr3 (293-380)||(50461365-50461456)
chr3 (290-380)||(28327651-28327745)
chr3 (290-380)||(28330976-28331070)
chr3 (291-380)||(30691021-30691114)
chr3 (332-437)||(2784355-2784460)
chr3 (325-446)||(19304444-19304567)
chr3 (290-380)||(3306056-3306150)
chr3 (32-103)||(10107505-10107577)
chr3 (325-445)||(16244203-16244325)
chr3 (330-445)||(54735970-54736085)
chr3 (291-380)||(2873850-2873943)
chr3 (291-380)||(54724027-54724120)
chr3 (386-445)||(9158296-9158357)
chr3 (347-380)||(6434592-6434625)
chr3 (291-380)||(53816113-53816208)
chr3 (32-103)||(538052-538124)
chr3 (385-446)||(9155113-9155176)
chr3 (291-380)||(18641586-18641680)
chr3 (291-380)||(18644582-18644676)
chr3 (330-437)||(18883459-18883566)
chr3 (32-103)||(23299444-23299516)
chr3 (325-380)||(35412826-35412884)
chr3 (32-103)||(52198342-52198414)
chr3 (325-379)||(6922841-6922898)
chr3 (330-380)||(7486897-7486950)
chr3 (330-380)||(23298429-23298482)
chr3 (292-446)||(25888237-25888391)
chr3 (291-376)||(19301087-19301175)
chr3 (291-378)||(11190812-11190903)
chr3 (292-380)||(30157860-30157951)
chr3 (352-446)||(41977361-41977454)
chr3 (385-435)||(50096968-50097020)
chr3 (32-103)||(6921927-6921999)
chr3 (32-103)||(10884055-10884127)
chr3 (352-437)||(10885215-10885299)
chr3 (55-103)||(18645632-18645680)
chr3 (325-380)||(20728451-20728509)
[»] scaffold0996 (1 HSPs)
scaffold0996 (291-445)||(1683-1841)
[»] chr4 (60 HSPs)
chr4 (291-446)||(19859265-19859425)
chr4 (291-446)||(19864158-19864318)
chr4 (291-445)||(53094710-53094870)
chr4 (18-103)||(53093744-53093830)
chr4 (308-446)||(33927189-33927329)
chr4 (293-446)||(56195728-56195885)
chr4 (292-380)||(44808784-44808876)
chr4 (293-380)||(29325025-29325116)
chr4 (292-447)||(18859974-18860129)
chr4 (292-380)||(34319746-34319838)
chr4 (308-446)||(15404845-15404987)
chr4 (300-380)||(15432291-15432374)
chr4 (325-445)||(3797579-3797702)
chr4 (291-380)||(5670777-5670870)
chr4 (291-380)||(5673095-5673188)
chr4 (292-445)||(10386140-10386293)
chr4 (330-445)||(56199093-56199211)
chr4 (291-378)||(34017614-34017705)
chr4 (32-103)||(37104132-37104204)
chr4 (32-103)||(56194759-56194831)
chr4 (330-446)||(15811899-15812018)
chr4 (32-102)||(56198066-56198137)
chr4 (292-437)||(17670508-17670653)
chr4 (309-437)||(10248039-10248167)
chr4 (347-446)||(26060762-26060861)
chr4 (385-446)||(7394621-7394684)
chr4 (330-437)||(11702353-11702460)
chr4 (291-380)||(27014462-27014555)
chr4 (325-446)||(19820949-19821072)
chr4 (293-368)||(22172215-22172294)
chr4 (32-103)||(3798687-3798759)
chr4 (32-103)||(5669665-5669737)
chr4 (291-380)||(5706593-5706687)
chr4 (401-445)||(5820813-5820857)
chr4 (325-437)||(12786357-12786471)
chr4 (32-103)||(15431201-15431273)
chr4 (32-103)||(15437815-15437887)
chr4 (32-103)||(19865534-19865606)
chr4 (385-446)||(24604998-24605061)
chr4 (32-103)||(33410853-33410925)
chr4 (32-103)||(47114813-47114885)
chr4 (32-102)||(19861179-19861250)
chr4 (330-380)||(24150914-24150967)
chr4 (41-103)||(29324025-29324088)
chr4 (34-104)||(33926160-33926231)
chr4 (41-103)||(44809795-44809858)
chr4 (350-445)||(11649213-11649308)
chr4 (28-84)||(37741472-37741529)
chr4 (401-445)||(44808723-44808768)
chr4 (359-437)||(52006294-52006371)
chr4 (325-380)||(3720595-3720653)
chr4 (55-103)||(5721862-5721910)
chr4 (32-103)||(9716988-9717060)
chr4 (32-103)||(12237391-12237463)
chr4 (32-99)||(15405793-15405861)
chr4 (36-103)||(15812973-15813041)
chr4 (32-103)||(18910641-18910713)
chr4 (325-380)||(24043958-24044016)
chr4 (385-446)||(26703235-26703298)
chr4 (325-380)||(35510226-35510284)
[»] chr7 (42 HSPs)
chr7 (325-445)||(5241929-5242053)
chr7 (293-380)||(6603647-6603738)
chr7 (308-445)||(11397820-11397959)
chr7 (330-446)||(26153398-26153514)
chr7 (330-445)||(8398064-8398179)
chr7 (330-437)||(22232404-22232511)
chr7 (330-437)||(22254228-22254335)
chr7 (292-437)||(5826486-5826631)
chr7 (292-437)||(11825133-11825278)
chr7 (330-446)||(8258132-8258248)
chr7 (385-446)||(22083193-22083256)
chr7 (290-380)||(44017609-44017703)
chr7 (330-445)||(5796778-5796894)
chr7 (400-445)||(13809276-13809321)
chr7 (325-445)||(4695713-4695835)
chr7 (32-103)||(16164926-16164998)
chr7 (308-380)||(16165953-16166029)
chr7 (391-446)||(23313254-23313311)
chr7 (400-446)||(44363680-44363726)
chr7 (325-446)||(4595768-4595891)
chr7 (386-448)||(23108178-23108242)
chr7 (291-380)||(45286901-45286996)
chr7 (291-380)||(45290312-45290407)
chr7 (32-103)||(4542111-4542183)
chr7 (325-445)||(10345408-10345530)
chr7 (32-103)||(10431423-10431495)
chr7 (105-157)||(14684285-14684337)
chr7 (32-103)||(26556547-26556619)
chr7 (32-103)||(48644653-48644725)
chr7 (255-294)||(10468620-10468659)
chr7 (330-380)||(22257492-22257545)
chr7 (389-444)||(22952846-22952903)
chr7 (391-446)||(24423205-24423262)
chr7 (347-380)||(13907633-13907666)
chr7 (400-437)||(23467023-23467060)
chr7 (352-446)||(48645729-48645822)
chr7 (32-103)||(2442168-2442240)
chr7 (325-380)||(4543029-4543087)
chr7 (325-380)||(9864567-9864625)
chr7 (325-380)||(26557731-26557789)
chr7 (325-380)||(35961332-35961390)
chr7 (402-446)||(44363596-44363640)
[»] chr5 (33 HSPs)
chr5 (291-445)||(18239268-18239428)
chr5 (292-445)||(7625304-7625461)
chr5 (293-380)||(14015968-14016059)
chr5 (291-421)||(10629414-10629544)
chr5 (292-433)||(30761613-30761754)
chr5 (330-437)||(34652534-34652641)
chr5 (347-446)||(2453547-2453643)
chr5 (292-437)||(3195288-3195433)
chr5 (292-437)||(30764432-30764577)
chr5 (32-103)||(42061523-42061595)
chr5 (291-378)||(26752532-26752623)
chr5 (324-380)||(40915986-40916045)
chr5 (352-445)||(7271293-7271385)
chr5 (330-437)||(19686415-19686522)
chr5 (385-445)||(17944926-17944988)
chr5 (35-104)||(7624297-7624367)
chr5 (332-437)||(26548327-26548432)
chr5 (332-437)||(26551886-26551991)
chr5 (332-437)||(28562139-28562244)
chr5 (332-437)||(28565707-28565812)
chr5 (309-446)||(31575635-31575774)
chr5 (327-380)||(32838116-32838172)
chr5 (352-446)||(21335458-21335551)
chr5 (352-445)||(4099291-4099383)
chr5 (352-445)||(21332440-21332532)
chr5 (325-380)||(22936769-22936827)
chr5 (32-103)||(28442072-28442144)
chr5 (325-445)||(33552366-33552488)
chr5 (41-103)||(14016927-14016990)
chr5 (291-380)||(41306355-41306448)
chr5 (105-150)||(17663786-17663831)
chr5 (325-446)||(30066556-30066679)
chr5 (400-445)||(40799720-40799765)
[»] chr2 (48 HSPs)
chr2 (292-448)||(31427303-31427463)
chr2 (292-446)||(13518498-13518652)
chr2 (291-379)||(25959520-25959612)
chr2 (330-446)||(45454096-45454215)
chr2 (293-380)||(33310850-33310941)
chr2 (293-380)||(38015702-38015793)
chr2 (291-380)||(25874363-25874456)
chr2 (303-380)||(24235295-24235375)
chr2 (291-380)||(25870966-25871059)
chr2 (291-380)||(29440677-29440770)
chr2 (291-380)||(45499188-45499281)
chr2 (303-380)||(24238567-24238647)
chr2 (291-446)||(36808207-36808365)
chr2 (330-446)||(45457384-45457503)
chr2 (291-378)||(9188484-9188575)
chr2 (290-380)||(40677589-40677683)
chr2 (308-446)||(1506394-1506532)
chr2 (291-380)||(9185254-9185347)
chr2 (255-294)||(22020539-22020578)
chr2 (385-445)||(30720080-30720142)
chr2 (308-437)||(1503199-1503328)
chr2 (292-437)||(11059994-11060139)
chr2 (325-445)||(43723927-43724049)
chr2 (32-103)||(45453088-45453160)
chr2 (255-294)||(27266259-27266298)
chr2 (291-380)||(37279506-37279599)
chr2 (303-445)||(34682892-34683035)
chr2 (325-446)||(13971666-13971789)
chr2 (254-294)||(1387017-1387057)
chr2 (325-380)||(15470685-15470743)
chr2 (330-445)||(15703739-15703854)
chr2 (330-445)||(15719043-15719158)
chr2 (32-103)||(36985626-36985698)
chr2 (32-103)||(45456337-45456409)
chr2 (292-378)||(3252516-3252605)
chr2 (325-446)||(5666745-5666867)
chr2 (330-380)||(8888858-8888911)
chr2 (41-103)||(31430529-31430592)
chr2 (41-103)||(38014682-38014745)
chr2 (260-294)||(9966888-9966922)
chr2 (200-242)||(22020419-22020461)
chr2 (400-445)||(30926846-30926891)
chr2 (363-445)||(38460582-38460663)
chr2 (32-103)||(15466207-15466279)
chr2 (32-103)||(25873240-25873312)
chr2 (291-380)||(30274598-30274692)
chr2 (393-436)||(33749721-33749765)
chr2 (32-103)||(36809326-36809398)
[»] chr1 (33 HSPs)
chr1 (291-401)||(34732167-34732281)
chr1 (303-445)||(29642986-29643130)
chr1 (18-103)||(34733154-34733240)
chr1 (291-380)||(28111258-28111351)
chr1 (292-380)||(27536360-27536452)
chr1 (293-380)||(37183693-37183784)
chr1 (293-380)||(45960574-45960665)
chr1 (291-380)||(2794429-2794522)
chr1 (385-445)||(3087499-3087560)
chr1 (293-380)||(31205041-31205132)
chr1 (303-380)||(3796656-3796736)
chr1 (385-446)||(34066533-34066595)
chr1 (290-381)||(23441100-23441195)
chr1 (32-103)||(49499459-49499531)
chr1 (291-378)||(20399054-20399146)
chr1 (292-361)||(30938411-30938483)
chr1 (391-445)||(8435430-8435486)
chr1 (391-445)||(17618857-17618913)
chr1 (325-446)||(21110912-21111035)
chr1 (385-439)||(22456494-22456550)
chr1 (325-437)||(2405756-2405870)
chr1 (32-103)||(6071791-6071863)
chr1 (32-103)||(31204051-31204123)
chr1 (325-380)||(42022875-42022933)
chr1 (391-439)||(22447950-22448000)
chr1 (391-439)||(22453184-22453234)
chr1 (385-443)||(23990132-23990193)
chr1 (41-103)||(27537104-27537167)
chr1 (41-103)||(45961598-45961661)
chr1 (385-439)||(49148086-49148142)
chr1 (352-445)||(21018222-21018314)
chr1 (393-448)||(28138600-28138656)
chr1 (385-446)||(34732100-34732163)
[»] scaffold0014 (2 HSPs)
scaffold0014 (308-447)||(228857-228996)
scaffold0014 (330-446)||(223953-224069)
[»] scaffold0045 (2 HSPs)
scaffold0045 (330-448)||(90010-90130)
scaffold0045 (32-100)||(89002-89071)
[»] scaffold0233 (1 HSPs)
scaffold0233 (292-445)||(10140-10296)
[»] scaffold0080 (1 HSPs)
scaffold0080 (325-445)||(27356-27478)
[»] scaffold0034 (1 HSPs)
scaffold0034 (292-445)||(48173-48327)
[»] scaffold1063 (1 HSPs)
scaffold1063 (325-445)||(2732-2854)
[»] scaffold0737 (1 HSPs)
scaffold0737 (331-437)||(7117-7224)
[»] scaffold0360 (2 HSPs)
scaffold0360 (330-446)||(2687-2803)
scaffold0360 (330-445)||(6519-6634)
[»] scaffold0134 (1 HSPs)
scaffold0134 (385-446)||(7542-7605)
[»] scaffold0381 (1 HSPs)
scaffold0381 (291-380)||(5228-5321)
[»] scaffold0214 (3 HSPs)
scaffold0214 (303-437)||(20274-20408)
scaffold0214 (303-437)||(13824-13958)
scaffold0214 (303-437)||(27840-27974)
[»] scaffold0002 (1 HSPs)
scaffold0002 (309-437)||(118221-118352)
[»] scaffold0062 (2 HSPs)
scaffold0062 (330-445)||(52651-52766)
scaffold0062 (330-445)||(67600-67715)
[»] scaffold0412 (1 HSPs)
scaffold0412 (330-380)||(372-425)
[»] scaffold0084 (1 HSPs)
scaffold0084 (255-294)||(28854-28893)
[»] scaffold0056 (1 HSPs)
scaffold0056 (255-294)||(68119-68158)
[»] scaffold0757 (1 HSPs)
scaffold0757 (359-446)||(5634-5720)
[»] scaffold1657 (1 HSPs)
scaffold1657 (391-445)||(226-282)
[»] scaffold0334 (1 HSPs)
scaffold0334 (32-96)||(18500-18565)
[»] scaffold1684 (1 HSPs)
scaffold1684 (32-99)||(369-437)
[»] scaffold0520 (1 HSPs)
scaffold0520 (400-445)||(1304-1351)


Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 201 - 472
Target Start/End: Complemental strand, 37681532 - 37681256
Alignment:
Q  201 gtgtcacgattttaccagaccagaaaaacatgctttcgacgtgtcacggttgcaaaaacgtgacacgattttgggcgaatttctgagcctattttatgca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37681532 gtgtcacgattttaccagaccagaaaaacatgctttcgacgtgtcacggttgcaaaaacgtgacacgattttgggcgaatttctgagcctattttatgca 37681433  T
Q  301 atcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagt-cccagt-gatacaaactt 395  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  37681432 atcaaaactaccgcctcgaacactaaaataatttacacatcctagatagtaaccttattgttaaattgagattaacacagtcccctgtggatacaaactt 37681333  T
Q  396 ataaattttattacttcgataatattagtacacttgctaaaagtctatcaacagcctccggaggacctgacaccacc 472  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37681332 ataaattttattacttcgatattattagtacacttgctaaaagtctatcaacaacctccggaggacctgacaccacc 37681256  T

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Target: chr8; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 37681715 - 37681576
Alignment:
Q  18 atttttattataaattcatgatcttttgagttcacagcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaattaattttctgaag 117  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  37681715 atttttattgtaaattcatgatcttttgagttcacagtaagcttaaagagcaaggaaaatatgaaaagttgaagattttgaagaaagtaactttctgaag 37681616  T
Q  118 aatattgaagttcacaattattttgagcatgataaagtgc 157  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37681615 aatattgaagttcacaattattttgagcatgataaagtgc 37681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 38249335 - 38249195
Alignment:
Q  18 atttttattataaattcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaattaattttctgaa 116  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  38249335 atttttattgtaaattcatgatcttttgaattcacaagcaagcttaaacagcaaggaaaacatgaaaagttaaagattttgaagaaagtaattttctgaa 38249236  T
Q  117 gaatattgaagttcacaattattttgagcatgataaagtgc 157  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  38249235 gaatattggagttcacagttattttgagcatgataaagtgc 38249195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 45155190 - 45155030
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-ga 386  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||| ||||| || ||    
T  45155190 attttatgcaatcaaaactactgcctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacggtccctgtgga 45155091  T
Q  387 tacaaacttataaattttattacttcgataatattagtacacttgct-aaaagtctatcaa 446  Q
    ||| |||||||||||||||||||||||||| | |||||||||||||| |||||||||||||    
T  45155090 tacgaacttataaattttattacttcgatagttttagtacacttgctaaaaagtctatcaa 45155030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 330 - 445
Target Start/End: Complemental strand, 36710519 - 36710400
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   |  |||||| ||||||||||||||||||||||| ||| |||| |||||||||| |||||||||| |||| | ||||||    
T  36710519 aatttacacatcctagatattaaatttattgctaaattgagattaacacagtccctgtggatacgaacttataaactttattactttgatagtcttagta 36710420  T
Q  426 cacttgctaaaagtctatca 445  Q
    ||||||||||||||||||||    
T  36710419 cacttgctaaaagtctatca 36710400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 445
Target Start/End: Complemental strand, 14589526 - 14589387
Alignment:
Q  308 ctactgcctcgaacactaaaataa-tttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagtga-tacaaacttataaatt 402  Q
    |||||||||||  |||||||| || ||||||||||||| |   |||| |||||| ||||||||||||||||||||||  |||| ||| ||||||   |||    
T  14589526 ctactgcctcgggcactaaaagaaatttacacatcctacacattaacattattgctaaattgagattaacacagtcctcgtgaatacgaactta---att 14589430  T
Q  403 ttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  14589429 ttattacttcgataattttagtacacttgctaaaaatctatca 14589387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 447
Target Start/End: Original strand, 31986499 - 31986638
Alignment:
Q  308 ctactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattt 403  Q
    ||||||||||  ||||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| |||| |||||    ||||    
T  31986499 ctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgcatacgaactt----attt 31986594  T
Q  404 tattacttcgataatattagtacacttgctaaaagtctatcaac 447  Q
    ||||||||||||| | ||||||||||||||||||||||||||||    
T  31986595 tattacttcgatagttttagtacacttgctaaaagtctatcaac 31986638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 380
Target Start/End: Complemental strand, 18824315 - 18824224
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||||||||||||   |||| |||||| ||||||||||||||||||||||    
T  18824315 tttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 18824224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 31981594 - 31981710
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcc-cagtgatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| |||||||||||||||||| ||  ||||| |||||    ||||||||||||||||| | ||||||    
T  31981594 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatagatacgaactt----attttattacttcgatagttttagta 31981689  T
Q  426 cacttgctaaaagtctatcaa 446  Q
    |||||||||||||||||||||    
T  31981690 cacttgctaaaagtctatcaa 31981710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 293 - 436
Target Start/End: Original strand, 25231283 - 25231429
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtgatac 389  Q
    ||||||||||| |||||||||| ||   || | ||||||||||  ||||||| |||   | ||||||| |||||||||||||||||||||     |||||    
T  25231283 tttatgcaatctaaactactgcttcaggcattgaaataatttatccatcctaaatattaaacttattgctaaattgagattaacacagtcttgtggatac 25231382  T
Q  390 aaacttataaattttattacttcgataatattagtacacttgctaaa 436  Q
     |||||||||| ||||||||||||||| | |||||||||||||||||    
T  25231383 gaacttataaaatttattacttcgatagttttagtacacttgctaaa 25231429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 16953973 - 16954066
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   |||||||||||||||||||||||| |   |||| |||||||| ||||||||||||||||||||    
T  16953973 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaacgttattgttgaattgagattaacacagtcc 16954066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 445
Target Start/End: Original strand, 5964490 - 5964605
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcc-cagtgatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| |||||||||||||||||| ||  ||||| |||||    ||||||||||||||||| | ||| ||    
T  5964490 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatggatacgaactt----attttattacttcgatagttttaata 5964585  T
Q  426 cacttgctaaaagtctatca 445  Q
    ||||| ||||||||||||||    
T  5964586 cacttactaaaagtctatca 5964605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 378
Target Start/End: Complemental strand, 25591400 - 25591310
Alignment:
Q  292 ttttatgcaa-tcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagt 378  Q
    |||||||||| ||||||||||| ||||   |||||||||||||||||||||||| |   ||||||||| | ||||||||||||||||||||    
T  25591400 ttttatgcaaatcaaaactactacctcaggcactaaaataatttacacatcctaaatattaaccttatcgctaaattgagattaacacagt 25591310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 437
Target Start/End: Original strand, 30645719 - 30645826
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    ||||||||||||||| |||   || |||||| ||| ||||||||||||||||||  || ||||| |||||    ||||||||||||||||||| ||||||    
T  30645719 aatttacacatcctatatatttactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgataattttagta 30645814  T
Q  426 cacttgctaaaa 437  Q
    ||||||||||||    
T  30645815 cacttgctaaaa 30645826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 445
Target Start/End: Complemental strand, 33883231 - 33883114
Alignment:
Q  330 aatttacacatcctagata--accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgat--aatattagt 424  Q
    ||||||||||||||| |||  | | ||||| ||||||||||||||||||||||  ||| |||| ||||||   ||||||||||||||||  | | |||||    
T  33883231 aatttacacatcctatatattaacgtattgctaaattgagattaacacagtcctcgtggatacgaactta---attttattacttcgatgcatttttagt 33883135  T
Q  425 acacttgctaaaagtctatca 445  Q
    |||||||||||||||||||||    
T  33883134 acacttgctaaaagtctatca 33883114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 446
Target Start/End: Original strand, 4868450 - 4868605
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    ||||||||||||||| |||||  || || |||| | | ||||||||||||||| |||   || |||||| ||| |||| ||||||||| |||  || |||    
T  4868450 ttttatgcaatcaaacctactatcttgagcacttataaaatttacacatcctaaatattaactttattgctaatttgatattaacacattcctcgttgat 4868549  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    || |||||||   |||||||||||||||| | ||||||||| || ||||||||||||||    
T  4868550 acgaacttat---ttttattacttcgatagttttagtacacatgttaaaagtctatcaa 4868605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 380
Target Start/End: Complemental strand, 18825808 - 18825717
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||| ||||||||| |||||||||   |||||||| || |||||||||||||||||   || |||||| ||||||||||||||||||||||    
T  18825808 tttatacaatcaaaattactgcctcaggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 18825717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 340
Target Start/End: Complemental strand, 38248319 - 38248270
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacat 340  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||||    
T  38248319 attttatgcaatcaaaactactgcatcgggcactaaaataatttacacat 38248270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 437
Target Start/End: Original strand, 14188405 - 14188512
Alignment:
Q  330 aatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||   |||| |||||| ||| ||||||||||| ||||||  || ||||| |||||    ||||||||||||||||| | ||||||    
T  14188405 aatttacacatcctagatattaactttattgctaagttgagattaacgcagtcctcgtggatacgaactt----attttattacttcgatagttttagta 14188500  T
Q  426 cacttgctaaaa 437  Q
    ||||||||||||    
T  14188501 cacttgctaaaa 14188512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 18721173 - 18721115
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  18721173 aaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 18721115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 446
Target Start/End: Original strand, 23644018 - 23644175
Alignment:
Q  291 attttatgcaatcaaaactactgcctcg--aacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt- 384  Q
    |||||||||||||||| ||||||||| |  || || ||||||||||| |||||||| |||   || |||||  ||||||||||||||||||||||  ||     
T  23644018 attttatgcaatcaaatctactgcctagggaaaac-aaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcctcgtg 23644116  T
Q  385 gatacaaacttataaattttattacttcgataatattagtacacttgct-aaaagtctatcaa 446  Q
    ||||| |||||    ||||||||| ||||||| | ||||| |||||||| |||||||||||||    
T  23644117 gatacgaactt----attttattatttcgatagttttagttcacttgctaaaaagtctatcaa 23644175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 41778799 - 41778738
Alignment:
Q  386 atacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    |||| |||||||||||||||||||||||  ||| | |||||||| |||||||||||||||||    
T  41778799 atacgaacttataaattttattacttcgatatatttttagtacagttgctaaaagtctatca 41778738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 5584320 - 5584261
Alignment:
Q  324 taaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||| |||   ||||||||| |||||||| |||||||||||||    
T  5584320 taaaataatttacacatcctaaatattaaccttattgctaaattgaaattaacacagtcc 5584261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 446
Target Start/End: Original strand, 12583283 - 12583376
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataa--tattagtacacttgctaaaagtctatcaa 446  Q
    |||||| |||||||||||||||| |||||  ||| ||||||||||||    ||||||| |||||||   | |||||||||||||||||||||||||||    
T  12583283 ttattgctaaattgagattaacatagtcctcgtggatacaaacttat----tttattatttcgatacatttttagtacacttgctaaaagtctatcaa 12583376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 13097223 - 13097278
Alignment:
Q  395 tataaattttattacttcgataa--tattagtacacttgctaaaagtctatcaaca 448  Q
    ||||||||||||||||||||||   | |||||||||||||||||||| ||||||||    
T  13097223 tataaattttattacttcgatatatttttagtacacttgctaaaagtttatcaaca 13097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 14589779 - 14589707
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||| | | |||||||| |||||||| |  |||||||||||||||    
T  14589779 ttcatgatgttttgagttcacaagcaagcttacacaacaaggaaagcatgaaaaatacaagattttgaagaaa 14589707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 445
Target Start/End: Complemental strand, 18695859 - 18695744
Alignment:
Q  330 aatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||   |||| |||||| ||| |||| ||||||| |||||  || ||||| |||||    ||||||||||||||||| | |||||     
T  18695859 aatttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaactt----attttattacttcgatagttttagtg 18695764  T
Q  426 cacttgctaaaagtctatca 445  Q
    |||||||||||| |||||||    
T  18695763 cacttgctaaaaatctatca 18695744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 33878201 - 33878129
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| | ||| ||||| ||||| ||||||| ||||| | ||||||||||||||||    
T  33878201 ttcatgatattttgagttcacaagaaagtttaaacagcaaagaaaacaagaaaaatagaagattttgaagaaa 33878129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 13196334 - 13196373
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  13196334 aaaacgtgacacaattttgggcgaatttctgtgcctattt 13196373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 22174845 - 22174782
Alignment:
Q  41 ttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  22174845 ttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 22174782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 33419138 - 33419177
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  33419138 aaaacgtgacacgattttgggcgaatttttgtgcctattt 33419177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 10664190 - 10664242
Alignment:
Q  331 atttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  10664190 atttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 10664242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 38249132 - 38249090
Alignment:
Q  200 cgtgtcacgattttaccagaccagaaaaacatgctttcgacgt 242  Q
    |||| |||||||||||||||||| ||||||||||| |||||||    
T  38249132 cgtgacacgattttaccagaccataaaaacatgctctcgacgt 38249090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 44008478 - 44008539
Alignment:
Q  386 atacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    |||| ||||||||||||||||||||| |  ||| | |||||||||||| |||||||||||||    
T  44008478 atacgaacttataaattttattactttgatatatttttagtacacttgttaaaagtctatca 44008539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 14349297 - 14349357
Alignment:
Q  388 acaaacttataaattttattacttcgataa--tattagtacacttgctaaaagtctatcaa 446  Q
    |||||||||||||  ||||||||||||||   | |||||||||||| ||||||||||||||    
T  14349297 acaaacttataaaaattattacttcgatacatttttagtacacttgttaaaagtctatcaa 14349357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 18722273 - 18722208
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagatttt 96  Q
    |||||||| ||||||||||||| ||||||||||| | ||| ||||||| ||||| | |||||||||    
T  18722273 ttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 18722208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 25592463 - 25592398
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagatttt 96  Q
    |||||||| ||||||||||||| ||||||||||| | ||| ||||||| ||||| | |||||||||    
T  25592463 ttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 25592398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 25595648 - 25595583
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagatttt 96  Q
    |||||||| ||||||||||||| ||||||||||| | ||| ||||||| ||||| | |||||||||    
T  25595648 ttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 25595583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 272
Target Start/End: Complemental strand, 38249081 - 38249048
Alignment:
Q  239 acgtgtcacggttgcaaaaacgtgacacgatttt 272  Q
    |||||||||| |||||||||||||||||||||||    
T  38249081 acgtgtcacgattgcaaaaacgtgacacgatttt 38249048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 41836297 - 41836202
Alignment:
Q  350 ccttattgttaaattgagattaacacagtcc-cagtgatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    |||||||| |||||||||||||||||||||| ||  ||||| |||||||   |||||||| ||||||  | | ||||||  ||||||||||||||||||    
T  41836297 ccttattgctaaattgagattaacacagtcctcatggatacgaacttat---ttttattatttcgatacatttttagtattcttgctaaaagtctatca 41836202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 5980179 - 5980121
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||    
T  5980179 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcc 5980121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 43681761 - 43681707
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacaca 376  Q
    |||||||||||||||||||| |||   || |||||| ||||||||||||||||||    
T  43681761 aaaataatttacacatcctaaatatttactttattgctaaattgagattaacaca 43681707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 43682760 - 43682688
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||| | ||||| ||||| ||||| |||| || ||||| | ||||||||||||||||    
T  43682760 ttcatgatattttgagttcataagcaagtttaaacagcaaagaaagcaagaaaaatagaagattttgaagaaa 43682688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 3e-52; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 6512419 - 6512559
Alignment:
Q  18 atttttattataaattcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaattaattttctgaa 116  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  6512419 atttttattgtaaattcatgatcttttgagttcacaagcaagcttaaacagcaaggaaaacatgaaaagttgaagattttgaagagagtaattttctgaa 6512518  T
Q  117 gaatattgaagttcacaattattttgagcatgataaagtgc 157  Q
    |||||||| |||||| | |||||||||||||||||||||||    
T  6512519 gaatattggagttcagagttattttgagcatgataaagtgc 6512559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 157
Target Start/End: Complemental strand, 28112725 - 28112587
Alignment:
Q  20 ttttattataaattcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaattaattttctgaaga 118  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  28112725 ttttattgtaaattcttgatcttttgagttcacaagcaagcttaaaaagcaaggaaagcatgaaaagttgaagattttgaagaaaataattttctgaaga 28112626  T
Q  119 atattgaagttcacaattattttgagcatgataaagtgc 157  Q
    |||| | |||||||| ||||||||| |||||||||||||    
T  28112625 atatcggagttcacagttattttgaccatgataaagtgc 28112587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 291 - 442
Target Start/End: Complemental strand, 14281439 - 14281284
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-a 386  Q
    |||||||||||||||||||||||| | |  ||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||| | ||| |    
T  14281439 attttatgcaatcaaaactactgcgttgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtctctgtgga 14281340  T
Q  387 tacaaacttataaattttattacttcgataatattagtacacttgctaaaagtcta 442  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||||||||||||    
T  14281339 tacaaacttataaattttattacttctatagttttagtacacttgctaaaagtcta 14281284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 300 - 446
Target Start/End: Original strand, 5260020 - 5260170
Alignment:
Q  300 aatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaactt 395  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||   ||||||||| |||||||||||||||| |||||  ||| |||| |||||    
T  5260020 aatcaaaactactgcctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacatagtccttgtggatacgaactt 5260119  T
Q  396 ataaattttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    ||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  5260120 ataaattttattacttcgatagttttagtacatttgctaaaagtctatcaa 5260170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 14282460 - 14282320
Alignment:
Q  18 atttttattataaattcatgatcttttgagttcac-agcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaattaattttctgaa 116  Q
    |||||| ||||||| ||||||||||||||||| || |||||||| ||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  14282460 atttttcttataaactcatgatcttttgagtttacgagcaagctaaaacagcaaggaaaacatgaaaagttgaaaattttgaagaaagtaattttctgaa 14282361  T
Q  117 gaatattgaagttcacaattattttgagcatgataaagtgc 157  Q
    |||||||| | |||||| || |||||||||| |||||||||    
T  14282360 gaatattggacttcacagttcttttgagcataataaagtgc 14282320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 28111726 - 28111568
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagataa---ccttattgttaaattgagattaacacagtcccagtg-a 386  Q
    |||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||    ||||| || ||||||||||||||||||||||  ||| |    
T  28111726 attttatgcaatcaaaactactgcctagggcactaaaataatttacgcatcctagatattatccttagtgctaaattgagattaacacagtccatgtgga 28111627  T
Q  387 tacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    ||| |||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  28111626 tacgaacttataaattttattacttcgatagttttagtacacttgctaaaagtttatca 28111568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 291 - 435
Target Start/End: Original strand, 2372534 - 2372686
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagtg-- 385  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||   ||||||||||| ||||||||||||||||||||| | |||      
T  2372534 attttatgcaatcaaaactacttcctcggacactaaaataatttacaaatcctagatattaaccttattgctaaattgagattaacacagtctctgtgga 2372633  T
Q  386 ---atacaaacttataaattttattacttcgataatattagtacacttgctaa 435  Q
       | ||||||||||||||||||||||||||||| | ||||||||||||||||    
T  2372634 tacaaacaaacttataaattttattacttcgatagttttagtacacttgctaa 2372686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 28107674 - 28107516
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-a 386  Q
    |||||||||||||||||||||  ||| |  ||||||||||||||||||||||||||||   |||||| || |||||||||||||||||| |||| ||| |    
T  28107674 attttatgcaatcaaaactacaacctagggcactaaaataatttacacatcctagatattaaccttagtgctaaattgagattaacacaatccctgtgga 28107575  T
Q  387 tacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    ||| |||||||||||||||||||||||||| | |||||||||||| ||||||| |||||    
T  28107574 tacgaacttataaattttattacttcgatagttttagtacacttgttaaaagtttatca 28107516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 324 - 446
Target Start/End: Original strand, 6514231 - 6514356
Alignment:
Q  324 taaaataatttacacatcctagata--accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatat 420  Q
    |||||||||||||||||||||||||  |||||||| | |||||||||||||||||||||  || ||||| |||||||||||||||||||||||||| | |    
T  6514231 taaaataatttacacatcctagatattaccttattataaaattgagattaacacagtccttgtagatacgaacttataaattttattacttcgatagttt 6514330  T
Q  421 tagtacacttgctaaaagtctatcaa 446  Q
    ||||||||||||||||||||||||||    
T  6514331 tagtacacttgctaaaagtctatcaa 6514356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 5259100 - 5259243
Alignment:
Q  18 atttttattataaattcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaattaattttctgaa 116  Q
    ||||||||| |||||||||||||||||||||||| | ||||||||||| | ||||||||   |||||||||||||||||| | |||| ||||||||||||    
T  5259100 atttttattgtaaattcatgatcttttgagttcagaagcaagcttaaacaacaaggaaagtgtgaaaagttgaagattttaaggaaagtaattttctgaa 5259199  T
Q  117 gaat---attgaagttcacaattattttgagcatgataaagtgc 157  Q
    ||||   ||  ||  ||||| |||||||||||||||||||||||    
T  5259200 gaatagcatgaaaagtcacagttattttgagcatgataaagtgc 5259243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 291 - 437
Target Start/End: Original strand, 13005394 - 13005544
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-a 386  Q
    ||||| |||||||||||||||||||||   ||   |||||||||| ||||||||||||   | ||||||| ||||||||||||||||||  ||  ||| |    
T  13005394 attttctgcaatcaaaactactgcctcaggcaaataaataatttaaacatcctagatattaatcttattgctaaattgagattaacacaacccatgtgga 13005493  T
Q  387 tacaaacttataaattttattacttcgataatattagtacacttgctaaaa 437  Q
    ||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  13005494 tacgaacttataaattttattacttcgatagttttagtacacttgctaaaa 13005544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 446
Target Start/End: Original strand, 14966426 - 14966580
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || |||    
T  14966426 ttttatgcacacaaatctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggat 14966525  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    || |||||    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  14966526 acgaactt----attttattacttcgatagttttagtacacttgctaaaagtctatcaa 14966580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 291 - 411
Target Start/End: Original strand, 2846507 - 2846631
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-ga 386  Q
    ||||||| |||||||| ||||||||||  |||| ||||||||||||||||||||||   ||||||||||| || | ||||||||||||| |||  || ||    
T  2846507 attttatacaatcaaatctactgcctcagacaccaaaataatttacacatcctagatagtaaccttattgctagactgagattaacacaatccttgtgga 2846606  T
Q  387 tacaaacttataaattttattactt 411  Q
    ||| ||| |||||||||||||||||    
T  2846607 tacgaacgtataaattttattactt 2846631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 5737984 - 5737891
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || |||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||    
T  5737984 attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtcc 5737891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 9954164 - 9954257
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   |||||||||||||||||||||||| |   ||||||||||| ||||||||||||||||||||||    
T  9954164 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 9954257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 445
Target Start/End: Original strand, 14969906 - 14970059
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc-cagtgat 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||||||||   |||| |||||| ||| |||||||||||| ||||| ||  |||    
T  14969906 ttttatgcacacaaatctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacatagtcctcatggat 14970005  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    || |||||    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  14970006 acgaactt----attttattacttcgatagttttagtacacttgctaaaagtctatca 14970059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 445
Target Start/End: Original strand, 24371419 - 24371574
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacact-aaaataatttacacatcctagataa---ccttattgttaaattgagattaacacagtcccagtg-a 386  Q
    ||||||||||||||| ||||||||| |  ||   ||||||||||||||||| |||||||   |  | ||| ||||||||||||||||||||||  ||| |    
T  24371419 ttttatgcaatcaaatctactgcctagggcaaacaaaataatttacacatcttagataataacaattttgctaaattgagattaacacagtcctcgtgga 24371518  T
Q  387 tacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    ||| |||||||   |||||||||||||||||| |||||||||||| ||||| |||||||    
T  24371519 tacgaacttat---ttttattacttcgataattttagtacacttgttaaaattctatca 24371574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 352 - 447
Target Start/End: Complemental strand, 5618066 - 5617974
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatcaac 447  Q
    |||||| ||| ||||||||||||||||||  ||| ||||||||||||    ||||||||||||||| | |||||||||||||||||||| |||||||    
T  5618066 ttattgctaagttgagattaacacagtcctcgtggatacaaacttat----tttattacttcgatagttttagtacacttgctaaaagtttatcaac 5617974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 6512743 - 6512782
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6512743 aaaacgtgacacgattttgggcgaatttctgagcctattt 6512782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 16731634 - 16731696
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    ||||| |||||||||||||||||||||||  ||| | ||||||||||||||||||||||||||    
T  16731634 gatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaagtctatca 16731696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 20527218 - 20527156
Alignment:
Q  385 gatacaaacttataaattttattacttcgata-atat-tagtacacttgctaaaagtctatca 445  Q
    ||||| |||||||||||||||||||||||||| || | |||||||||||||||||||||||||    
T  20527218 gatacgaacttataaattttattacttcgatatatttgtagtacacttgctaaaagtctatca 20527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 374
Target Start/End: Original strand, 2379432 - 2379519
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaaca 374  Q
    ||||||||||| | ||||||||||||||   ||||||||||||||||||||| || |   ||||||||||| ||||||||||||||||    
T  2379432 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcttaaatattaaccttattgctaaattgagattaaca 2379519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 447
Target Start/End: Complemental strand, 2773218 - 2773154
Alignment:
Q  385 gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatcaac 447  Q
    ||||| |||||||||||| ||||||||||||  | | ||||||||||||||||||||||||||||    
T  2773218 gatacgaacttataaattatattacttcgattcatttttagtacacttgctaaaagtctatcaac 2773154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 1125658 - 1125564
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   |||||||| || |||||||||||||||||   || |||||| ||||||||||||||||||||||    
T  1125658 attttatgcaaaccaaaactactgcctcaggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 1125564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 31071531 - 31071603
Alignment:
Q  32 ttcatgatcttttgagttcac-agcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| |||||||||||| |||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  31071531 ttcatgatgttttgagttcacgagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 31071603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 437
Target Start/End: Original strand, 34502586 - 34502693
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || ||||| |||||    |||||| |||||||||| | ||||||    
T  34502586 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttactacttcgatagttttagta 34502681  T
Q  426 cacttgctaaaa 437  Q
    ||||||||||||    
T  34502682 cacttgctaaaa 34502693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 5259427 - 5259466
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  5259427 aaaacgtgacacgattttgggcgaatttctgagcttattt 5259466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 14282157 - 14282118
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  14282157 aaaacgtgacatgattttgggcgaatttctgagcctattt 14282118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 20189243 - 20189181
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    ||||| |||||||||||||||||||||||  ||| | ||| ||||||||||||||||||||||    
T  20189243 gatacgaacttataaattttattacttcgatatatttttaatacacttgctaaaagtctatca 20189181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 22146748 - 22146810
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    ||||| |||||||||||||||||||||||  ||| | ||| ||||||||||||||||||||||    
T  22146748 gatacgaacttataaattttattacttcgatatatttttaatacacttgctaaaagtctatca 22146810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 6512622 - 6512664
Alignment:
Q  200 cgtgtcacgattttaccagaccagaaaaacatgctttcgacgt 242  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  6512622 cgtgacacgattttaccagaccagaaaaacatgctctcgacgt 6512664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 14282277 - 14282235
Alignment:
Q  200 cgtgtcacgattttaccagaccagaaaaacatgctttcgacgt 242  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  14282277 cgtgacacgattttaccagaccagaaaaacatgctctcgacgt 14282235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 10290251 - 10290344
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattagtacacttgct-aaaagtctatca 445  Q
    |||||| ||||||||||||||||||||||  || |||||||||||    ||||||||||||||||  | | |||||||||||||| ||||||||||||    
T  10290251 ttattgctaaattgagattaacacagtcctcgtggatacaaactt----attttattacttcgatacatttttagtacacttgctaaaaagtctatca 10290344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 439
Target Start/End: Complemental strand, 12983437 - 12983381
Alignment:
Q  385 gatacaaacttataaattttattacttcga--taatattagtacacttgctaaaagt 439  Q
    ||||| ||||||||||||||||||||||||  || | ||||||||||||||||||||    
T  12983437 gatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagt 12983381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 23008295 - 23008417
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc-cagtgatacaaacttataaattttattacttcgataata- 419  Q
    |||||||||||||||||||| |||   || |||||| | |||||||||||||||||||| ||  ||||| | |||| |   |||| |||||||||| ||     
T  23008295 aaaataatttacacatcctaaatattaactttattgcttaattgagattaacacagtcctcatggatacgatcttaga---tttactacttcgatagtat 23008391  T
Q  420 ttagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||||||| |||||    
T  23008392 ttagtacacttgctaaaagtttatca 23008417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 23389116 - 23389051
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagatttt 96  Q
    |||||||| ||||||||||||| ||||||||||| ||||| ||||||| ||||| | |||||||||    
T  23389116 ttcatgatattttgagttcacatgcaagcttaaacagcaaagaaaacaagaaaaatagaagatttt 23389051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 445
Target Start/End: Complemental strand, 23780069 - 23779947
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc-cagtgatacaaacttataaattttattacttcgataata- 419  Q
    |||||||||||||||||||| |||   || |||||| | |||||||||||||||||||| ||  ||||| | |||| |   |||| |||||||||| ||     
T  23780069 aaaataatttacacatcctaaatattaactttattgcttaattgagattaacacagtcctcatggatacgatcttaga---tttactacttcgatagtat 23779973  T
Q  420 ttagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||||||| |||||    
T  23779972 ttagtacacttgctaaaagtttatca 23779947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 9313599 - 9313537
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    ||||| |||||||||||||||||||||||  ||| | |||||||||||| ||||||| |||||    
T  9313599 gatacgaacttataaattttattacttcgatatatttttagtacacttgttaaaagtttatca 9313537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 28108470 - 28108431
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  28108470 aaaacgtgacacaattttgggcgaatttatgagcctattt 28108431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 28118138 - 28118200
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    ||||| |||||||||||||||||||||||  ||| | ||| |||||||||||||||| |||||    
T  28118138 gatacgaacttataaattttattacttcgatatatttttaatacacttgctaaaagtttatca 28118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 5259306 - 5259348
Alignment:
Q  200 cgtgtcacgattttaccagaccagaaaaacatgctttcgacgt 242  Q
    |||| ||| |||||||||||||||||||||||||| |||||||    
T  5259306 cgtgacacaattttaccagaccagaaaaacatgctctcgacgt 5259348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 445
Target Start/End: Complemental strand, 13095584 - 13095489
Alignment:
Q  347 taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    |||| |||||| ||| |||||||||||| ||||   || |||||||||||    ||||||||||||||||| | |||||||| ||||||||||| |||||    
T  13095584 taactttattgctaagttgagattaacaaagtcatcgtggatacaaactt----attttattacttcgatagttttagtacatttgctaaaagtttatca 13095489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 444
Target Start/End: Complemental strand, 15578728 - 15578667
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatc 444  Q
    ||||| ||||||||||||||||| |||||  ||| | ||| |||||||||||||||||||||    
T  15578728 gatacgaacttataaattttattccttcgatatatttttaatacacttgctaaaagtctatc 15578667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 11402571 - 11402608
Alignment:
Q  401 ttttattacttcgataata-ttagtacacttgctaaaa 437  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  11402571 ttttattacttcgataatatttagtacacttgctaaaa 11402608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 439
Target Start/End: Complemental strand, 12980550 - 12980494
Alignment:
Q  385 gatacaaacttataaattttattacttcga--taatattagtacacttgctaaaagt 439  Q
    ||||| |||||||||||||||||||||| |  || | ||||||||||||||||||||    
T  12980550 gatacgaacttataaattttattacttcaatttatttttagtacacttgctaaaagt 12980494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 23379777 - 23379712
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagatttt 96  Q
    |||||||| ||||||||||||| ||||||||||| | ||| ||||||| ||||| | |||||||||    
T  23379777 ttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 23379712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 3596703 - 3596609
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaaca-ctaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtc 379  Q
    ||||||||||| | ||||||||||||| | ||| |||||| || |||| |||||||| |||   ||||||||| |||||||||||||||||||||    
T  3596703 attttatgcaaaccaaaactactgcctaggacaactaaaagaaatttatacatcctaaatatttaccttattgctaaattgagattaacacagtc 3596609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 271
Target Start/End: Original strand, 6512674 - 6512706
Alignment:
Q  239 acgtgtcacggttgcaaaaacgtgacacgattt 271  Q
    |||||||||| ||||||||||||||||||||||    
T  6512674 acgtgtcacgattgcaaaaacgtgacacgattt 6512706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 13022259 - 13022191
Alignment:
Q  17 aatttttattataaattcatgatcttttgagttcac-agcaagcttaaagagcaaggaaaacatgaaaa 84  Q
    |||||||| | |||||||||||| ||| |||||||| |||||||||||| | |||| ||| ||||||||    
T  13022259 aatttttaatgtaaattcatgatatttggagttcacaagcaagcttaaacaacaagaaaagcatgaaaa 13022191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 13942053 - 13942093
Alignment:
Q  254 aaaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    |||||||||||||||||||||||||| || || ||||||||    
T  13942053 aaaaacgtgacacgattttgggcgaaattatgtgcctattt 13942093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 23848018 - 23848076
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| |||||||| |||   || ||| |||||||||||||||||||||||||    
T  23848018 aaaataatttatacatcctaaatatttactttagtgttaaattgagattaacacagtcc 23848076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 786 - 626
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-ga 386  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||| || ||    
T  786 attttatgcaatcaaaactactgcctcgagcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtccctgtgga 687  T
Q  387 tacaaacttataaattttattacttcgataatattagtacacttgct-aaaagtctatcaa 446  Q
    ||| ||||| |||||||||| ||||||||| | |||||||||||||| |||||||||||||    
T  686 tacgaacttgtaaattttatcacttcgatagttttagtacacttgctaaaaagtctatcaa 626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 32287225 - 32287067
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-a 386  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||| ||  || |    
T  32287225 attttatgcaatcaaaactattgcctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagttcctatgga 32287126  T
Q  387 tacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||    
T  32287125 tacaaacttataaattttattacttcgatagttttagtacacttgttaaaagtctatca 32287067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 4250633 - 4250748
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtgatacaaacttataaattttattacttcgataatattagtac 426  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| ||| || ||||    ||||||||||||||| | |||||||    
T  4250633 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggtacgaatttat----tttattacttcgatagttttagtac 4250728  T
Q  427 acttgctaaaagtctatcaa 446  Q
    ||||||||||||||||||||    
T  4250729 acttgctaaaagtctatcaa 4250748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 539112 - 539205
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | |||||||||||||||  || ||||||||||||||||||||| |   ||||||||||| ||||||||||||||||||||||    
T  539112 attttatgcaaaccaaaactactgcctcgggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 539205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 10963603 - 10963752
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-at 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| ||    
T  10963603 ttttatgcacacaaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggat 10963702  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaa 437  Q
    || ||||||| | |||||||||||||||| | ||||||| ||||||||||    
T  10963703 acgaacttattatttttattacttcgatagttttagtacgcttgctaaaa 10963752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 330 - 437
Target Start/End: Original strand, 10960134 - 10960245
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| |||| ||||||| | |||||||||||||||| | ||||||    
T  10960134 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaacttattatttttattacttcgatagttttagta 10960233  T
Q  426 cacttgctaaaa 437  Q
    | ||||||||||    
T  10960234 cgcttgctaaaa 10960245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 330 - 446
Target Start/End: Complemental strand, 42354284 - 42354168
Alignment:
Q  330 aatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||   |||| |||||||||| |||||||| |||||||||  || ||||| |||||    ||||||||||||||||| | ||||||    
T  42354284 aatttacacatcctagatattaactttattgttaagttgagattgacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 42354189  T
Q  426 cacttgctaaaagtctatcaa 446  Q
    |||||||||||||| ||||||    
T  42354188 cacttgctaaaagtttatcaa 42354168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 292 - 446
Target Start/End: Complemental strand, 2279539 - 2279385
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || |||    
T  2279539 ttttatgcacacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggat 2279440  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    || |||||    ||||||||||||||||| | |||||| ||||| ||||||||||||||    
T  2279439 acgaactt----attttattacttcgatagttttagtatacttgataaaagtctatcaa 2279385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 12541208 - 12541115
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || ||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  12541208 attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 12541115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 427
Target Start/End: Original strand, 10967112 - 10967251
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-at 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| ||    
T  10967112 ttttatgcacacaaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggat 10967211  T
Q  388 acaaacttataaattttattacttcgataatattagtaca 427  Q
    || ||||||| | |||||||||||||||| | ||||||||    
T  10967212 acgaacttattatttttattacttcgatagttttagtaca 10967251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 380
Target Start/End: Complemental strand, 50461456 - 50461365
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||| ||| ||||   |||| |||||| ||||||||||||||||||||||    
T  50461456 tttatgcaatcaaaactactgcctcgggcactaaaagaaatttacatatcatagatattaacgttattgctaaattgagattaacacagtcc 50461365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 28327651 - 28327745
Alignment:
Q  290 tattttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||| | ||||||||||||||   |||||||||||||||||||||||| |   ||| ||||||| |||||||| |||||||||||||    
T  28327651 tattttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcc 28327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 28330976 - 28331070
Alignment:
Q  290 tattttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||| | ||||||||||||||   |||||||||||||||||||||||| |   ||| ||||||| |||||||| |||||||||||||    
T  28330976 tattttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcc 28331070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 30691021 - 30691114
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | |||||||||| |||   || ||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  30691021 attttatgcaaaccaaaactactgtctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 30691114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 437
Target Start/End: Original strand, 2784355 - 2784460
Alignment:
Q  332 tttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagtaca 427  Q
    |||||||||||||||||   || |||||| ||| ||||||||||||||||||  || ||||| |||||    ||||||||||||||||| | ||||||||    
T  2784355 tttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagtaca 2784450  T
Q  428 cttgctaaaa 437  Q
    ||||||||||    
T  2784451 cttgctaaaa 2784460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 446
Target Start/End: Complemental strand, 19304567 - 19304444
Alignment:
Q  325 aaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aat 418  Q
    |||||||||||||||||||  |   ||||| ||||| | |||| ||||||||| |||||  || |||||||||||    ||||||||||||||||  |||    
T  19304567 aaaataatttacacatcctcaatattaaccatattgctgaattaagattaacagagtcctcgtggatacaaactt----attttattacttcgatgcaat 19304472  T
Q  419 attagtacacttgctaaaagtctatcaa 446  Q
     |||||||||||||||||||||||||||    
T  19304471 tttagtacacttgctaaaagtctatcaa 19304444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 380
Target Start/End: Original strand, 3306056 - 3306150
Alignment:
Q  290 tattttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||| | ||||||||||||||   || |||||||||||||||||||||||   |||| |||||| ||  ||||||||||||||||||    
T  3306056 tattttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctagatattaactttattgctaggttgagattaacacagtcc 3306150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 10107577 - 10107505
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | ||| ||||||| ||||| | ||||||||||||||||    
T  10107577 ttcatgatattttgagttcacaagcaagcttaaacaacaaagaaaacaagaaaaatagaagattttgaagaaa 10107505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 16244203 - 16244325
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||  ||||||||||||||||| ||||  ||| ||||||||||||    ||||||||||||||  | |    
T  16244203 aaaataatttatacatcctaaatatttactttattactaaattgagattaacacggtcctcgtgtatacaaacttat----tttattacttcgatgtatt 16244298  T
Q  419 attagtacacttgctaaaagtctatca 445  Q
     ||||||||||||||||||||||||||    
T  16244299 tttagtacacttgctaaaagtctatca 16244325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 445
Target Start/End: Complemental strand, 54736085 - 54735970
Alignment:
Q  330 aatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||   |||| |||||| ||| |||||||||||||| |||  || ||||| |||||    ||||||| ||||||||||| ||| ||    
T  54736085 aatttacacatcctagatattaactttattgctaagttgagattaacacaatcctcgtggatacgaactt----attttataacttcgataattttaata 54735990  T
Q  426 cacttgctaaaagtctatca 445  Q
    |||||||||||||| |||||    
T  54735989 cacttgctaaaagtttatca 54735970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 2873850 - 2873943
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || ||||||||||||||||||||| |   |||| |||||| |||||| |||||||||||||||    
T  2873850 attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaacattattgctaaattaagattaacacagtcc 2873943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 54724027 - 54724120
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   |||||||||||||||||||||||| |   |||| |||||| |||||||| |||||||| ||||    
T  54724027 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctaaattgaaattaacacggtcc 54724120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 9158296 - 9158357
Alignment:
Q  386 atacaaacttataaattttattacttcga--taatattagtacacttgctaaaagtctatca 445  Q
    ||||| |||||||||||||||||||||||  || | |||||||||||||||||||| |||||    
T  9158296 atacatacttataaattttattacttcgatttatttttagtacacttgctaaaagtttatca 9158357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 6434625 - 6434592
Alignment:
Q  347 taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||||||||||||||||    
T  6434625 taaccttattgttaaattgagattaacacagtcc 6434592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 53816113 - 53816208
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaaca-ctaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | |||||||||||||||  || |||||| || ||||||||||||| |||   |||||||||||||||||||||||||| |||||    
T  53816113 attttatgcaaaccaaaactactgcctcgggcaactaaaagaaatttacacatcctaaatattaaccttattgttaaattgagattaacatagtcc 53816208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 538052 - 538124
Alignment:
Q  32 ttcatgatcttttgagttcacag-caagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| |||||||||||||  |||| ||||| ||||| ||||||| ||||| | ||||||||||||||||    
T  538052 ttcatgatattttgagttcacaaacaagtttaaacagcaaagaaaacaagaaaaatagaagattttgaagaaa 538124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 446
Target Start/End: Original strand, 9155113 - 9155176
Alignment:
Q  385 gatacaaacttataaattttattacttcga--taatattagtacacttgctaaaagtctatcaa 446  Q
    ||||| |||||||||||||||||| |||||  || | |||||||||||||||||||| ||||||    
T  9155113 gatacgaacttataaattttattatttcgatttatttttagtacacttgctaaaagtttatcaa 9155176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 18641680 - 18641586
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || ||||| || |||||||||| ||||||   ||||||||| ||||||||||||||||||||||    
T  18641680 attttatgcaaaccaaaactactgcctcaggcattaaaagaaatttacacatcttagatattaaccttattgctaaattgagattaacacagtcc 18641586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 18644676 - 18644582
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || ||||| || |||||||||| ||||||   ||||||||| ||||||||||||||||||||||    
T  18644676 attttatgcaaaccaaaactactgcctcaggcattaaaagaaatttacacatcttagatattaaccttattgctaaattgagattaacacagtcc 18644582  T

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Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 437
Target Start/End: Original strand, 18883459 - 18883566
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| |||| |||||    |||||| ||||| |||| | ||||||    
T  18883459 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgaatacgaactt----attttactactttgatagttttagta 18883554  T
Q  426 cacttgctaaaa 437  Q
    ||||||||||||    
T  18883555 cacttgctaaaa 18883566  T

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Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 23299516 - 23299444
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| ||||| ||||||| || || | ||||||||||||||||    
T  23299516 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaagattttgaagaaa 23299444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 35412826 - 35412884
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||| |||   || |||||| ||||||||||||||||||||||    
T  35412826 aaaataatttacacatcctaaatatttactttattgctaaattgagattaacacagtcc 35412884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 52198342 - 52198414
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | ||| |||| || ||||| | ||||||||||||||||    
T  52198342 ttcatgatattttgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaagattttgaagaaa 52198414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 379
Target Start/End: Original strand, 6922841 - 6922898
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtc 379  Q
    |||||||||||||||||||| |||   || |||||| |||||||||||||||||||||    
T  6922841 aaaataatttacacatcctaaatattaactttattgctaaattgagattaacacagtc 6922898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 7486897 - 7486950
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  7486897 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 7486950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 380
Target Start/End: Complemental strand, 23298482 - 23298429
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  23298482 aatttacacatcctaaatatttaccttattgctaaattgagattaacacagtcc 23298429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 446
Target Start/End: Complemental strand, 25888391 - 25888237
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||| ||||||   |  |||||| ||| ||||||||||||||||||  || |||    
T  25888391 ttttatgcacacaaacctactgcctcacgcacttataaaatttacacatcatagatattaattttattgctaagttgagattaacacagtcctcgtcgat 25888292  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    || |||||    ||||||||||||||||| | |||||| ||||||||||| | ||||||    
T  25888291 acgaactt----attttattacttcgatagttttagtatacttgctaaaaatttatcaa 25888237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 376
Target Start/End: Complemental strand, 19301175 - 19301087
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacaca 376  Q
    ||||||||| |||||| |||||||||||   |  |||||||||||||||||||  |   ||||| ||||||| ||||||||||||||||    
T  19301175 attttatgccatcaaatctactgcctcgggaatcaaaataatttacacatcctgaatattaaccatattgttgaattgagattaacaca 19301087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 11190812 - 11190903
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatccta---gataaccttattgttaaattgagattaacacagt 378  Q
    ||||||||||| | ||||| |||||||||  || |||||||||||||||||||||     ||||||||||  |||||||||||||| |||||    
T  11190812 attttatgcaaaccaaaacaactgcctcgggcattaaaataatttacacatcctaagtattaaccttattactaaattgagattaatacagt 11190903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 30157951 - 30157860
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||  |||| ||||||||||  ||| | | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||    
T  30157951 ttttatgcacacaaacctactgcctcagacaattataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcc 30157860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 446
Target Start/End: Original strand, 41977361 - 41977454
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatcaa 446  Q
    |||||| |||||| |||||||||||||||  || |||||||||||    ||||||||||||||||  | | ||| |||||||||||||| ||||||||    
T  41977361 ttattgctaaattaagattaacacagtcctcgtagatacaaactt----attttattacttcgatacatttttaatacacttgctaaaaatctatcaa 41977454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 50096968 - 50097020
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaa 435  Q
    ||||| |||||||||||||||||||||||  ||| | ||||||||||||||||    
T  50096968 gatacgaacttataaattttattacttcgatatatttttagtacacttgctaa 50097020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 6921927 - 6921999
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| ||||| ||||||| || || |  |||||||||||||||    
T  6921927 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatataagattttgaagaaa 6921999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 10884055 - 10884127
Alignment:
Q  32 ttcatgatcttttgagttcac-agcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| |||||||||||| |||||| ||||| ||||| |||||||  |||| | |||||||| |||||||    
T  10884055 ttcatgatattttgagttcacaagcaagtttaaacagcaatgaaaacaaaaaaaatagaagatttcgaagaaa 10884127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 437
Target Start/End: Original strand, 10885215 - 10885299
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgat--aatattagtacacttgctaaaa 437  Q
    |||||| ||||||||||||||||||||||  ||| ||||||||||||    |||||||||| |||  | | ||||||||||||||||||    
T  10885215 ttattgctaaattgagattaacacagtcctcgtggatacaaacttat----tttattactttgatgcatttttagtacacttgctaaaa 10885299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 18645680 - 18645632
Alignment:
Q  55 caagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||||| ||||| ||||||| ||||| | ||||||||||||||||    
T  18645680 caagcttaaacagcaaagaaaacaagaaaaatagaagattttgaagaaa 18645632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 20728509 - 20728451
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||    
T  20728509 aaaataatttatacatcctaaatattcactttattgctaaattgagattaacacagtcc 20728451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 1841 - 1683
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-a 386  Q
    ||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||  ||| |    
T  1841 attttatgccatcaaaactactggctcgggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacagtccttgtgga 1742  T
Q  387 tacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    ||| |||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  1741 tacgaacttataaattttattacttcgatagttttagtacacttgctaaaattctatca 1683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 4e-39; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 19859425 - 19859265
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg- 385  Q
    ||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||   ||||||||| ||||||||||||||| |||||||  ||     
T  19859425 attttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctagatattaaccttattgctaaattgagattaactcagtccctttgg 19859326  T
Q  386 atacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    |||| |||||||||||||||||||||| ||| | |||||||||||| ||||||||||||||    
T  19859325 atacgaacttataaattttattacttctatagttttagtacacttgttaaaagtctatcaa 19859265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 19864318 - 19864158
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtga 386  Q
    ||||||||||| | ||||||||||||||   ||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||| |||||  |||    
T  19864318 attttatgcaaaccaaaactactgcctctggcactaaaataatttacacatcctagatattaaccttattgctaaattgagattaacacggtccctctga 19864219  T
Q  387 -tacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
     ||| |||||||||||||||||||||||||| | ||||||||||||| |||| ||||||||    
T  19864218 atacgaacttataaattttattacttcgatagttttagtacacttgcaaaaattctatcaa 19864158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 291 - 445
Target Start/End: Original strand, 53094710 - 53094870
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-ga 386  Q
    |||||||||||| |||||||||| |||  ||||||||||||||||||||||||| |   ||||| ||||| ||||||||||||||||||||||| || ||    
T  53094710 attttatgcaataaaaactactgtctcagacactaaaataatttacacatcctatatattaaccatattgctaaattgagattaacacagtccctgtgga 53094809  T
Q  387 tacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    ||| |||||||||| ||||||||||||||  | |  || |||||||||||||||| |||||    
T  53094810 tacgaacttataaagtttattacttcgattcatttataatacacttgctaaaagtttatca 53094870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 53093744 - 53093830
Alignment:
Q  18 atttttattataaattcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  53093744 atttttattgtaaattcatggtcttttgagttcacaagcaagcttaaacagcaaggaaagcatgaaaagttgaagattttgaagaaa 53093830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 308 - 446
Target Start/End: Original strand, 33927189 - 33927329
Alignment:
Q  308 ctactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaatt 402  Q
    |||||||||||  |||||||| || |||||||||||||||||   || |||||| ||||||||||||||||||||||  ||| |||| ||||||   |||    
T  33927189 ctactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaactta---att 33927285  T
Q  403 ttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  33927286 ttattacttcgatagttttagtacacttgctaaaagtctatcaa 33927329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 293 - 446
Target Start/End: Original strand, 56195728 - 56195885
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagtg-at 387  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||||||||||||   |||| |||||| |||||||||||||||||| |||  ||| ||    
T  56195728 tttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacaatcctcgtgaat 56195827  T
Q  388 acaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatcaa 446  Q
    || |||||   |||||||||||||||||  | | |||||||||||||||||| ||||||||    
T  56195828 acgaactt---aattttattacttcgatgcatttttagtacacttgctaaaaatctatcaa 56195885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 44808876 - 44808784
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||||||||||  |||||||| || ||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  44808876 ttttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 44808784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 380
Target Start/End: Original strand, 29325025 - 29325116
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||||||||||||   |||| |||||| ||||||||||||||||||||||    
T  29325025 tttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 29325116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 292 - 447
Target Start/End: Original strand, 18859974 - 18860129
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || |||    
T  18859974 ttttatgcacacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggat 18860073  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatcaac 447  Q
    || |||||    ||||||||||||||||| | |||||||||||||||||||| |||||||    
T  18860074 acgaactt----attttattacttcgatatttttagtacacttgctaaaagtttatcaac 18860129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 34319838 - 34319746
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||||| ||||  |||||||| || ||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  34319838 ttttatgcaatcaaaactactgtctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 34319746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 15404987 - 15404845
Alignment:
Q  308 ctactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaatt 402  Q
    |||||||||||  |||||||| || |||||||||||||||||   || |||||| |||||||||||||||||||||   || ||||| |||||   ||||    
T  15404987 ctactgcctcgtgcactaaaacaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcgtcgtggatacgaactt---aatt 15404891  T
Q  403 ttattacttcgat-aata-ttagtacacttgctaaaagtctatcaa 446  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||    
T  15404890 ttattacttcgatgcatatttagtacacttgctaaaagtctatcaa 15404845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 15432291 - 15432374
Alignment:
Q  300 aatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||   || ||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  15432291 aatcaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 15432374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 445
Target Start/End: Complemental strand, 3797702 - 3797579
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||  ||| |||| ||||||   ||||||||||||||||  | |    
T  3797702 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaactta---attttattacttcgatgcatt 3797606  T
Q  419 attagtacacttgctaaaagtctatca 445  Q
     ||||||||||||||||||||||||||    
T  3797605 tttagtacacttgctaaaagtctatca 3797579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 5670777 - 5670870
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || ||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  5670777 attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 5670870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 5673095 - 5673188
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || ||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  5673095 attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 5673188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 445
Target Start/End: Original strand, 10386140 - 10386293
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||  | ||| | | ||||||||||||||| |||   || |||||| ||| ||||||||||||||||||  || |||    
T  10386140 ttttatgcacacaaacctactgcctcagaaacttataaaatttacacatcctaaatattaactttattgctaagttgagattaacacagtcctcgtggat 10386239  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    || |||||    ||||||||||||||||| | |||||||||||||||||||| |||||    
T  10386240 acgaactt----attttattacttcgatagttttagtacacttgctaaaagtttatca 10386293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 445
Target Start/End: Original strand, 56199093 - 56199211
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattag 423  Q
    |||||||||||||||||||   || |||||| ||||||||||||||||||||||  || ||||| |||||   |||||||||||||||||  | | ||||    
T  56199093 aatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaactt---aattttattacttcgatgcatttttag 56199189  T
Q  424 tacacttgctaaaagtctatca 445  Q
    |||||||||||||| |||||||    
T  56199190 tacacttgctaaaaatctatca 56199211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 34017705 - 34017614
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagt 378  Q
    ||||||||||| | ||||||||||||||   || ||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||    
T  34017705 attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagt 34017614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 37104204 - 37104132
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| ||||| ||||||| ||||| | ||||||||||||||||    
T  37104204 ttcatgatattttgagttcacaagcaagcttaaacagcaaagaaaacaagaaaaatagaagattttgaagaaa 37104132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 56194759 - 56194831
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | |||||||| |||||||| | ||||||||||||||||    
T  56194759 ttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaagattttgaagaaa 56194831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 446
Target Start/End: Complemental strand, 15812018 - 15811899
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattag 423  Q
    ||||||||| |||||||||   || |||||| ||||||||||||||||||||||  || ||||| |||||   |||||||||||||||||  | | ||||    
T  15812018 aatttacacttcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaactt---aattttattacttcgatgcatttttag 15811922  T
Q  424 tacacttgctaaaagtctatcaa 446  Q
    ||||||||||||| |||||||||    
T  15811921 tacacttgctaaaggtctatcaa 15811899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 56198066 - 56198137
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaa 102  Q
    |||||||| ||||||||||||| ||||||||||| | |||||||| |||||||| | |||||||||||||||    
T  56198066 ttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaagattttgaagaa 56198137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 17670508 - 17670653
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||||||||   |||| |||||| ||| |||||||||||| |||||  || |||    
T  17670508 ttttatgcacacaaacctactgcctcaggcacttacaaaatttacacatcctagatattaactttattgctaagttgagattaacatagtcctcgtggat 17670607  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaa 437  Q
    || |||||    ||||||||||||||||| | ||||||||||||||||||    
T  17670608 acgaactt----attttattacttcgatagttttagtacacttgctaaaa 17670653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 437
Target Start/End: Original strand, 10248039 - 10248167
Alignment:
Q  309 tactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaatttt 404  Q
    |||||||||  ||||| | | |||||||||||||||||   |||| |||||| ||  ||||||||||||||||||  || ||||| |||||    |||||    
T  10248039 tactgcctcatacacttataaaatttacacatcctagatattaactttattgctagtttgagattaacacagtcctcgtggatacgaactt----atttt 10248134  T
Q  405 attacttcgataatattagtacacttgctaaaa 437  Q
    |||||||||||| | ||||||||||||||||||    
T  10248135 attacttcgatagttttagtacacttgctaaaa 10248167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 446
Target Start/End: Original strand, 26060762 - 26060861
Alignment:
Q  347 taaccttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataa--tattagtacacttgctaaaagtctat 443  Q
    ||||||||||| ||| |||||||||||| |||||  ||| |||| |||||||   ||||||||||||||||   | ||||||||||||||||||||||||    
T  26060762 taaccttattgctaacttgagattaacatagtcctcgtggatacgaacttat---ttttattacttcgatacatttttagtacacttgctaaaagtctat 26060858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 7394684 - 7394621
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatcaa 446  Q
    ||||| |||||||||||||||||||||||  ||| | |||||||||||||||||||| ||||||    
T  7394684 gatacgaacttataaattttattacttcgatatacttttagtacacttgctaaaagtttatcaa 7394621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 437
Target Start/End: Complemental strand, 11702460 - 11702353
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| |||||||||||||||||   ||| |||| |||||||    ||||||||||||||| | ||||||    
T  11702460 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttat----tttattacttcgatagttttagta 11702365  T
Q  426 cacttgctaaaa 437  Q
    ||||||||||||    
T  11702364 cacttgctaaaa 11702353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 27014462 - 27014555
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   ||||||||||||||| |||||||| |||   || |||||  ||||||||||||||||||||||    
T  27014462 attttatgcaaaccaaaactactgcctcaggcactaaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcc 27014555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 446
Target Start/End: Original strand, 19820949 - 19821072
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| |||||||||||||||||| |||  || ||||| |||||    ||||||||||||||||  | |    
T  19820949 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtggatacgaactt----attttattacttcgatacatt 19821044  T
Q  419 attagtacacttgctaaaagtctatcaa 446  Q
     |||||||||||||||||||| ||||||    
T  19821045 tttagtacacttgctaaaagtatatcaa 19821072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 22172294 - 22172215
Alignment:
Q  293 tttatgcaatcaaaac-tactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgaga 368  Q
    ||||||||  |||||| ||||||||||  |||||||||||||||||||||||| |   ||||||||||| ||||||||||    
T  22172294 tttatgcacacaaaacatactgcctcgggcactaaaataatttacacatcctacatattaaccttattgctaaattgaga 22172215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 3798759 - 3798687
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| ||||| |||| || ||||| | ||||||||||||||||    
T  3798759 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaagcaagaaaaatagaagattttgaagaaa 3798687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 5669665 - 5669737
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| | ||| ||||||| ||||| | ||||||||||||||||    
T  5669665 ttcatgatattttgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagattttgaagaaa 5669737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 5706593 - 5706687
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || ||||| || |||||||||| ||||||   ||||||||| ||||||||||||||||||||||    
T  5706593 attttatgcaaaccaaaactactgcctcaggcattaaaagaaatttacacatcttagatattaaccttattgctaaattgagattaacacagtcc 5706687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 445
Target Start/End: Original strand, 5820813 - 5820857
Alignment:
Q  401 ttttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||    
T  5820813 ttttattacttcgataattttagtacacttgttaaaaatctatca 5820857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 437
Target Start/End: Original strand, 12786357 - 12786471
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||  || ||||| |||||    ||||||||||||||||  | |    
T  12786357 aaaataatttatacatcctaaatattcactttattgctaaattgagattaacacagtcctcgtggatacgaactt----attttattacttcgatacatt 12786452  T
Q  419 attagtacacttgctaaaa 437  Q
     ||||||||||||||||||    
T  12786453 tttagtacacttgctaaaa 12786471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 15431201 - 15431273
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| ||||| ||||||| || || | ||||||||||||||||    
T  15431201 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaagattttgaagaaa 15431273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 15437815 - 15437887
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| ||||| ||||||| || || | ||||||||||||||||    
T  15437815 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaagattttgaagaaa 15437887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 19865606 - 19865534
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | ||| |||| || ||||| | ||||||||||||||||    
T  19865606 ttcatgatattttgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaagattttgaagaaa 19865534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 24605061 - 24604998
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatcaa 446  Q
    ||||| |||||||| ||||||||||||||  ||| | ||||||||||||||||||||| |||||    
T  24605061 gatacgaacttatagattttattacttcgatatatttttagtacacttgctaaaagtcaatcaa 24604998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 33410925 - 33410853
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| | ||| ||||||| ||||| | ||||||||||||||||    
T  33410925 ttcatgatattttgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagattttgaagaaa 33410853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 47114813 - 47114885
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||| || ||||||||||||| ||||||||||| |  |||||||||||||||| |  |||||||||||||||    
T  47114813 ttcattatgttttgagttcacaagcaagcttaaacaataaggaaaacatgaaaaatacaagattttgaagaaa 47114885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 19861250 - 19861179
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaa 102  Q
    |||||||| ||||||||||||| ||||||||||| ||||| |||| || ||||| |  ||||||||||||||    
T  19861250 ttcatgatattttgagttcacaagcaagcttaaacagcaaagaaagcaagaaaaatataagattttgaagaa 19861179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 24150914 - 24150967
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||   || |||||| ||||||||||||||||||||||    
T  24150914 aatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 24150967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 29324025 - 29324088
Alignment:
Q  41 ttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  29324025 ttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 29324088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 33926160 - 33926231
Alignment:
Q  34 catgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaat 104  Q
    |||||| | ||||||||||| ||||||||||| | |||||||| |||||||| |  ||||||||||||||||    
T  33926160 catgatgtcttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaat 33926231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 44809858 - 44809795
Alignment:
Q  41 ttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  44809858 ttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 44809795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 11649308 - 11649213
Alignment:
Q  350 ccttattgttaaattgagattaacacagtcc-cagtgatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    |||||||| |||||||||||||||||||||| ||  ||||| |||||||   |||||||| ||||||  | | ||||||  ||||||||||||||||||    
T  11649308 ccttattgctaaattgagattaacacagtcctcatggatacgaacttat---ttttattatttcgatacatttttagtattcttgctaaaagtctatca 11649213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 37741529 - 37741472
Alignment:
Q  28 taaattcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaa 84  Q
    |||||||||||| ||| ||||||||| ||||||||||| |||||| |||||| |||||    
T  37741529 taaattcatgatatttggagttcacaagcaagcttaaacagcaagaaaaacaagaaaa 37741472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 445
Target Start/End: Complemental strand, 44808768 - 44808723
Alignment:
Q  401 ttttattacttcgataatatt-agtacacttgctaaaagtctatca 445  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||    
T  44808768 ttttactacttcgatagtatttagtacacttgctaaaagtctatca 44808723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 52006371 - 52006294
Alignment:
Q  359 taaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaa 437  Q
    ||||||||||||||||||||||  || |||||||||||    ||||||||||||||||  | | ||||||||||||||||||    
T  52006371 taaattgagattaacacagtcctcgtggatacaaactt----attttattacttcgattcatttttagtacacttgctaaaa 52006294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 3720595 - 3720653
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||    
T  3720595 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcc 3720653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 5721910 - 5721862
Alignment:
Q  55 caagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||||| ||||| ||||||| ||||| | ||||||||||||||||    
T  5721910 caagcttaaacagcaaagaaaacaagaaaaatagaagattttgaagaaa 5721862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 9716988 - 9717060
Alignment:
Q  32 ttcatgatcttttgagttcac-agcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| |||||||||||| |||||| ||||| | ||| ||||||| ||||| | |||||||| |||||||    
T  9716988 ttcatgatattttgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagatttcgaagaaa 9717060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 12237391 - 12237463
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | ||| |||| || || || | ||||||||||||||||    
T  12237391 ttcatgatattttgagttcacaagcaagcttaaacaacaaagaaagcaagagaaatagaagattttgaagaaa 12237463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 15405861 - 15405793
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaa 99  Q
    |||||||| ||||||||||||| ||||||||||| | |||||||  |||||||| |  |||||||||||    
T  15405861 ttcatgatgttttgagttcacaagcaagcttaaacaacaaggaacgcatgaaaaatacaagattttgaa 15405793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 15813041 - 15812973
Alignment:
Q  36 tgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||| ||||||||||||| ||||| ||||| | |||||||| |||||||| |  |||||||||||||||    
T  15813041 tgatgttttgagttcacaagcaagtttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 15812973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 18910641 - 18910713
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| |||| |||||| | ||| |||| || ||||| | ||||||||||||||||    
T  18910641 ttcatgatattttgagttcacaagcaaacttaaacaacaaagaaagcaagaaaaatagaagattttgaagaaa 18910713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 24044016 - 24043958
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||    
T  24044016 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcc 24043958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 26703298 - 26703235
Alignment:
Q  385 gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatcaa 446  Q
    ||||| || |||||||||||||||||| |||  | | |||||| ||||||||||||||||||||    
T  26703298 gatacgaagttataaattttattactttgatgcatttttagtatacttgctaaaagtctatcaa 26703235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 35510226 - 35510284
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||    
T  35510226 aaaataatttatacatcctaaatattcactttattgctaaattgagattaacacagtcc 35510284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 1e-36; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 325 - 445
Target Start/End: Complemental strand, 5242053 - 5241929
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatat 420  Q
    ||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  | |    
T  5242053 aaaataatttacacatcctagatagtaaccttattgctaaattgagattaacacagtccctgtggatacaaacttataaattttattacttcgatggttt 5241954  T
Q  421 tagtacacttgctaaaagtctatca 445  Q
    ||||||||||| |||||||||||||    
T  5241953 tagtacacttgataaaagtctatca 5241929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 380
Target Start/End: Original strand, 6603647 - 6603738
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||||   |||| |||||| ||||||||||||||||||||||    
T  6603647 tttatgcaatcaaaactactgcctcggacactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 6603738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 308 - 445
Target Start/End: Complemental strand, 11397959 - 11397820
Alignment:
Q  308 ctactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattt 403  Q
    |||||||||||  |||||| | |||||||||||||||||||   || |||||| ||||||||||||||||||||||  ||| |||| ||||||   ||||    
T  11397959 ctactgcctcgggcactaaga-aatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaactta---attt 11397864  T
Q  404 tattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    ||||||||||||  | | ||||||||||||||||||||||||||    
T  11397863 tattacttcgatgcatttttagtacacttgctaaaagtctatca 11397820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 26153398 - 26153514
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    ||||||||||||||| |||   || |||||| ||| ||||||||||||||||||  || ||||| |||||    ||||||||||||||||| | ||||||    
T  26153398 aatttacacatcctatatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 26153493  T
Q  426 cacttgctaaaagtctatcaa 446  Q
    |||||||||||||||||||||    
T  26153494 cacttgctaaaagtctatcaa 26153514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 445
Target Start/End: Original strand, 8398064 - 8398179
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || ||||| |||||    ||||||||||||||||| | ||||||    
T  8398064 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 8398159  T
Q  426 cacttgctaaaagtctatca 445  Q
    |||||||||||||| |||||    
T  8398160 cacttgctaaaagtttatca 8398179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 437
Target Start/End: Complemental strand, 22232511 - 22232404
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   ||||||||| ||| ||||||||||||||||||  || ||||| |||||    ||||||||||||||||| | ||||||    
T  22232511 aatttacacatcctagatattaaccttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 22232416  T
Q  426 cacttgctaaaa 437  Q
    ||||||||||||    
T  22232415 cacttgctaaaa 22232404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 437
Target Start/End: Original strand, 22254228 - 22254335
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   ||||||||| ||| ||||||||||||||||||  || ||||| |||||    ||||||||||||||||| | ||||||    
T  22254228 aatttacacatcctagatattaaccttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagta 22254323  T
Q  426 cacttgctaaaa 437  Q
    ||||||||||||    
T  22254324 cacttgctaaaa 22254335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 5826631 - 5826486
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||   |||| ||| |||||||||||||||||   |||| |||||| ||| ||||||||||||||||||  || |||    
T  5826631 ttttatgcacacaaacctactgcctcaggcacttaaaaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggat 5826532  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaa 437  Q
    |  |||||    ||||||||||||||||| | ||||||||||||||||||    
T  5826531 aagaactt----attttattacttcgatagttttagtacacttgctaaaa 5826486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Complemental strand, 11825278 - 11825133
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || |||    
T  11825278 ttttatgcacacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggat 11825179  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaa 437  Q
    || |||||    ||||||||||||||||| | ||||||||||||||||||    
T  11825178 acgaactt----attttattacttcgatagttttagtacacttgctaaaa 11825133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 8258132 - 8258248
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || ||||| |||||    ||||||||||||||||| | ||||||    
T  8258132 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtagatacgaactt----attttattacttcgatagttttagta 8258227  T
Q  426 cacttgctaaaagtctatcaa 446  Q
    |||||| ||||||| ||||||    
T  8258228 cacttgttaaaagtttatcaa 8258248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 22083256 - 22083193
Alignment:
Q  385 gatacaaacttataaattttattacttcgata--atattagtacacttgctaaaagtctatcaa 446  Q
    ||||| ||||||||||||||||| ||||||||  || |||||||||||||||||||||||||||    
T  22083256 gatacgaacttataaattttattgcttcgatataattttagtacacttgctaaaagtctatcaa 22083193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 44017703 - 44017609
Alignment:
Q  290 tattttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||| | ||||||||||||||   |||||||||||||||||||||||| |   ||| ||||||| |||||||| |||||||||||||    
T  44017703 tattttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcc 44017609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 445
Target Start/End: Original strand, 5796778 - 5796894
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| |||||||||||||||||   ||| |||| |||||||   |||||||||||||||| | ||||||    
T  5796778 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcttcgtggatacgaacttat---ttttattacttcgatagttttagta 5796874  T
Q  426 cacttgctaaaagtctatca 445  Q
    |||||||||||  |||||||    
T  5796875 cacttgctaaatttctatca 5796894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 445
Target Start/End: Complemental strand, 13809321 - 13809276
Alignment:
Q  400 attttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  13809321 attttattacttcgatagttttagtacacttgctaaaagtctatca 13809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 4695713 - 4695835
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| |||||| |||||||||||||||  ||| ||||||||||||    ||||||||||||||  | |    
T  4695713 aaaataatttatacatcctaaatatttactttattgctaaatttagattaacacagtcctcgtggatacaaacttat----tttattacttcgatgcatt 4695808  T
Q  419 attagtacacttgctaaaagtctatca 445  Q
     ||| ||||||||||||||||||||||    
T  4695809 tttaatacacttgctaaaagtctatca 4695835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 16164926 - 16164998
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  16164926 ttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 16164998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 380
Target Start/End: Original strand, 16165953 - 16166029
Alignment:
Q  308 ctactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||  |||||||| || |||||||||||||||||   || |||||| ||||||||||||||||||||||    
T  16165953 ctactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgataaattgagattaacacagtcc 16166029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 446
Target Start/End: Complemental strand, 23313311 - 23313254
Alignment:
Q  391 aacttataaattttattacttcgataa--tattagtacacttgctaaaagtctatcaa 446  Q
    |||||||||||||||||| |||||||   | |||||||||||||||||||||||||||    
T  23313311 aacttataaattttattatttcgatatatttttagtacacttgctaaaagtctatcaa 23313254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 446
Target Start/End: Original strand, 44363680 - 44363726
Alignment:
Q  400 attttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    ||||||||||||||||| | |||||||||||||||||||| ||||||    
T  44363680 attttattacttcgatatttttagtacacttgctaaaagtttatcaa 44363726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 446
Target Start/End: Complemental strand, 4595891 - 4595768
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtga-tacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||  |||| ||  ||| |||    ||||||||||||||  | |    
T  4595891 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtgaatatgaacatat----tttattacttcgatgcatt 4595796  T
Q  419 attagtacacttgctaaaagtctatcaa 446  Q
     |||||||||||||||||||||||||||    
T  4595795 tttagtacacttgctaaaagtctatcaa 4595768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 23108178 - 23108242
Alignment:
Q  386 atacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatcaaca 448  Q
    |||||||||||||||||||||||||| |  ||| | |||||||| ||||||||||| ||||||||    
T  23108178 atacaaacttataaattttattactttgatatatttttagtacagttgctaaaagtgtatcaaca 23108242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 45286996 - 45286901
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaaca-ctaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | |||||||||||||||  || |||||| || ||||||||||||| |||   |||||||||||||||||||||||||| |||||    
T  45286996 attttatgcaaaccaaaactactgcctcgggcaactaaaagaaatttacacatcctaaatattaaccttattgttaaattgagattaacatagtcc 45286901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 45290407 - 45290312
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaaca-ctaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | |||||||||||||||  || |||||| || ||||||||||||| |||   |||||||||||||||||||||||||| |||||    
T  45290407 attttatgcaaaccaaaactactgcctcgggcaactaaaagaaatttacacatcctaaatattaaccttattgttaaattgagattaacatagtcc 45290312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 4542111 - 4542183
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| ||||| ||||||| ||||| | ||||||||||| ||||    
T  4542111 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaagattttgaggaaa 4542183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 10345408 - 10345530
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| |||||||||||||||||| |||  || ||||| |||||    ||||||||||||||||  | |    
T  10345408 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacaatcctcgtggatacgaactt----attttattacttcgatacatt 10345503  T
Q  419 attagtacacttgctaaaagtctatca 445  Q
     |||||||||||||||||| |||||||    
T  10345504 tttagtacacttgctaaaattctatca 10345530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 10431423 - 10431495
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| ||||| ||||||| ||||| |  |||||||||||||||    
T  10431423 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaa 10431495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 14684337 - 14684285
Alignment:
Q  105 taattttctgaagaatattgaagttcacaattattttgagcatgataaagtgc 157  Q
    ||||||||||||| || ||| ||||||||| ||||||||||||||| ||||||    
T  14684337 taattttctgaagtatcttggagttcacaactattttgagcatgattaagtgc 14684285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 26556547 - 26556619
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | ||| |||| || ||||| | ||||||||||||||||    
T  26556547 ttcatgatattttgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaagattttgaagaaa 26556619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 48644653 - 48644725
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||| || ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  48644653 ttcataatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 48644725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 10468620 - 10468659
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  10468620 aaaacgtgacacgattttaggcgaatttctgtgcctattt 10468659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 22257492 - 22257545
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||| ||||||   ||||||||||||| ||||||||||||||||||    
T  22257492 aatttacacatcttagatattaaccttattgttaagttgagattaacacagtcc 22257545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 22952846 - 22952903
Alignment:
Q  389 caaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatc 444  Q
    |||||||||||||||||||||||||||  | | |||||||||| || |||||||||||    
T  22952846 caaacttataaattttattacttcgatgcatttttagtacactcgcaaaaagtctatc 22952903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 446
Target Start/End: Complemental strand, 24423262 - 24423205
Alignment:
Q  391 aacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatcaa 446  Q
    |||||||||||||||||||||| ||  | | |||||||||||||||||||| ||||||    
T  24423262 aacttataaattttattacttcaatgtatttttagtacacttgctaaaagtatatcaa 24423205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 13907666 - 13907633
Alignment:
Q  347 taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| ||||||||||||||||||||||    
T  13907666 taaccttattgctaaattgagattaacacagtcc 13907633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Complemental strand, 23467060 - 23467023
Alignment:
Q  400 attttattacttcgataatattagtacacttgctaaaa 437  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  23467060 attttattacttcgatagttttagtacacttgctaaaa 23467023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 446
Target Start/End: Original strand, 48645729 - 48645822
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatcaa 446  Q
    |||||| |||||||| |||||||||||||  || ||||| |||||    ||||||||||||||||  | | |||||||||||||||||||| ||||||    
T  48645729 ttattgctaaattgaaattaacacagtcctcgtggatacgaactt----attttattacttcgatgcatttttagtacacttgctaaaagtttatcaa 48645822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 2442240 - 2442168
Alignment:
Q  32 ttcatgatcttttgagttcac-agcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| |||||||||||| |||||| ||||| ||||| ||||||| ||||| | ||||||| ||| ||||    
T  2442240 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaagattctgaggaaa 2442168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 4543029 - 4543087
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||    
T  4543029 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcc 4543087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 9864625 - 9864567
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||| |||   || |||||  ||||||||||||||||||||||    
T  9864625 aaaataatttacacatcctaaatatttactttatttctaaattgagattaacacagtcc 9864567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 26557731 - 26557789
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||    
T  26557731 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcc 26557789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 35961332 - 35961390
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||    
T  35961332 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcc 35961390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 44363640 - 44363596
Alignment:
Q  402 tttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    ||||||||||||||| | || ||||||||||||||||| ||||||    
T  44363640 tttattacttcgatatttttggtacacttgctaaaagtttatcaa 44363596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 9e-28; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 291 - 445
Target Start/End: Complemental strand, 18239428 - 18239268
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagtg-a 386  Q
    |||||||||||||||| |||||||||    ||| ||||||||||||||||||||||   ||||||||||| || ||||||||||||| |||||  ||| |    
T  18239428 attttatgcaatcaaatctactgccttaggcaccaaaataatttacacatcctagacagtaaccttattgctagattgagattaacatagtccatgtgga 18239329  T
Q  387 tacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    ||| |||||||||||||||||||||||||  | | ||| |||||||||||||||| |||||    
T  18239328 tacgaacttataaattttattacttcgattcatttttaatacacttgctaaaagtttatca 18239268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 292 - 445
Target Start/End: Original strand, 7625304 - 7625461
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-ga 386  Q
    |||||||||||||||||||||||||||  ||||||||  |||||||||||||||||   |||| |||||| ||||||||||||||||||||||  || ||    
T  7625304 ttttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtgga 7625403  T
Q  387 tacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    ||| |||||    |||||| |||||||||  | | |||||||||||||||||||| |||||    
T  7625404 tacgaactt---tattttactacttcgatgcatttttagtacacttgctaaaagtttatca 7625461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 380
Target Start/End: Complemental strand, 14016059 - 14015968
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||||||||||||   |||| |||||| ||||||||||||||||||||||    
T  14016059 tttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 14015968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 421
Target Start/End: Original strand, 10629414 - 10629544
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagataacc---ttattgttaaattgagattaacacagtcc-cagtga 386  Q
    |||||||||||||||| |||||||||    || ||||||||||||||||||||| ||||     ||||||||||||||||||||||||||||| ||  ||    
T  10629414 attttatgcaatcaaatctactgccttaggcattaaaataatttacacatcctaaataataattttattgttaaattgagattaacacagtcctcatgga 10629513  T
Q  387 tacaaacttataaattttattacttcgataatatt 421  Q
    |||||||||    ||||||||||||||||| ||||    
T  10629514 tacaaactt----attttattacttcgatagtatt 10629544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 433
Target Start/End: Original strand, 30761613 - 30761754
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||  ||||| | | |||||||||||||||||||   || |||||||||| ||||||||||||||||||  || |||    
T  30761613 ttttatgcacacaaacctactgcctcagacacttataaaatttacacatcctagatattaactttattgttaagttgagattaacacagtcctcgtggat 30761712  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgct 433  Q
    || |||||    ||||||||||||||||| | ||||||||||||||    
T  30761713 acgaactt----attttattacttcgatagttttagtacacttgct 30761754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 437
Target Start/End: Complemental strand, 34652641 - 34652534
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| ||||||||||||    ||||||||||||||| | ||||||    
T  34652641 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacaaacttat----tttattacttcgatagttttagta 34652546  T
Q  426 cacttgctaaaa 437  Q
    ||||||||||||    
T  34652545 cacttgctaaaa 34652534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 347 - 446
Target Start/End: Original strand, 2453547 - 2453643
Alignment:
Q  347 taaccttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    |||| |||||| ||| ||||||||||||||||||  ||| ||||||||||||    ||||||||||||||| | |||||||||||||||||||| |||||    
T  2453547 taactttattgctaagttgagattaacacagtcctcgtggatacaaacttat----tttattacttcgatagttttagtacacttgctaaaagtttatca 2453642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 3195288 - 3195433
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || |||    
T  3195288 ttttatgcacacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggat 3195387  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaa 437  Q
    || |||||    ||||||||||||||||| | ||||||||||||||||||    
T  3195388 acgaactt----attttattacttcgatagttttagtacacttgctaaaa 3195433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 30764432 - 30764577
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||   |||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || |||    
T  30764432 ttttatgcacacaaacctactgcctcaggcacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggat 30764531  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaa 437  Q
    || |||||    ||||||||||||||||| | ||||||||||||||||||    
T  30764532 acgaactt----attttattacttcgatagttttagtacacttgctaaaa 30764577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 42061523 - 42061595
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| ||||| ||||||| ||||| | ||||||||||||||||    
T  42061523 ttcatgatattttgagttcacaagcaagcttaaacagcaaagaaaacaagaaaaatagaagattttgaagaaa 42061595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 26752623 - 26752532
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagt 378  Q
    |||||||||||||||||| ||| |||||  |||||||| || |||||||||| ||||||   || |||||| ||||||||||||||||||||    
T  26752623 attttatgcaatcaaaaccactacctcgggcactaaaagaaatttacacatcttagatattaacgttattgctaaattgagattaacacagt 26752532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 380
Target Start/End: Complemental strand, 40916045 - 40915986
Alignment:
Q  324 taaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  40916045 taaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 40915986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 445
Target Start/End: Original strand, 7271293 - 7271385
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    |||||| ||||||||||||||||||||||  || ||||| |||||    ||||||||||||||||  | | ||||||||||||||||||||||||||    
T  7271293 ttattgctaaattgagattaacacagtcctcgtggatacgaactt----attttattacttcgatacatttttagtacacttgctaaaagtctatca 7271385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 437
Target Start/End: Original strand, 19686415 - 19686522
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || ||||| |||||    |||||| |||||||||| | ||||||    
T  19686415 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt----attttactacttcgatagttttagta 19686510  T
Q  426 cacttgctaaaa 437  Q
    ||||||||||||    
T  19686511 cacttgctaaaa 19686522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 17944926 - 17944988
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    ||||| |||||||||||||||||||||||  ||| | |||||||||||||||||||| |||||    
T  17944926 gatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaagtttatca 17944988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 7624297 - 7624367
Alignment:
Q  35 atgatcttttgagttcacag-caagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaat 104  Q
    ||||| |||||||||||||| |||||||||| | |||||||| |||||||| |  ||||||||||||||||    
T  7624297 atgatgttttgagttcacaggcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaat 7624367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 437
Target Start/End: Original strand, 26548327 - 26548432
Alignment:
Q  332 tttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagtaca 427  Q
    |||||||||||||||||   || |||||| ||| || |||||||||||||||  || ||||| |||||    ||||||||||||||||| | ||||||||    
T  26548327 tttacacatcctagatactaactttattgctaagttaagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagtaca 26548422  T
Q  428 cttgctaaaa 437  Q
    ||||||||||    
T  26548423 cttgctaaaa 26548432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 437
Target Start/End: Original strand, 26551886 - 26551991
Alignment:
Q  332 tttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagtaca 427  Q
    |||||||||||||||||   || |||||| ||| || |||||||||||||||  || ||||| |||||    ||||||||||||||||| | ||||||||    
T  26551886 tttacacatcctagatactaactttattgctaagttaagattaacacagtcctcgtggatacgaactt----attttattacttcgatagttttagtaca 26551981  T
Q  428 cttgctaaaa 437  Q
    ||||||||||    
T  26551982 cttgctaaaa 26551991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 437
Target Start/End: Complemental strand, 28562244 - 28562139
Alignment:
Q  332 tttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagtaca 427  Q
    |||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| |||| ||| |||    ||||||||||||||| | ||||||||    
T  28562244 tttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaacctat----tttattacttcgatagttttagtaca 28562149  T
Q  428 cttgctaaaa 437  Q
    ||||||||||    
T  28562148 cttgctaaaa 28562139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 437
Target Start/End: Complemental strand, 28565812 - 28565707
Alignment:
Q  332 tttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagtaca 427  Q
    |||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| |||| ||| |||    ||||||||||||||| | ||||||||    
T  28565812 tttacacatcctagatactaactttattgctaagttgagattaacacagtcctcgtggatacgaacctat----tttattacttcgatagttttagtaca 28565717  T
Q  428 cttgctaaaa 437  Q
    ||||||||||    
T  28565716 cttgctaaaa 28565707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 446
Target Start/End: Original strand, 31575635 - 31575774
Alignment:
Q  309 tactgcctcgaacactaaaataa-tttacacatcctagataa---ccttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattt 403  Q
    ||||||||||  |||||||| || |||||| |||||||||||   | |||||||| |||||||||||| || ||||  ||| | || |||||||   |||    
T  31575635 tactgcctcgggcactaaaaaaaatttacatatcctagataataacgttattgttcaattgagattaatacggtccttgtggaaacgaacttat---ttt 31575731  T
Q  404 tattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    |||||||||||||| ||||||||||||| ||||  ||||||||    
T  31575732 tattacttcgataaaattagtacacttgttaaatatctatcaa 31575774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 380
Target Start/End: Original strand, 32838116 - 32838172
Alignment:
Q  327 aataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  32838116 aataatttacacatcctaaatattaaccttattgataaattgagattaacacagtcc 32838172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 446
Target Start/End: Complemental strand, 21335551 - 21335458
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataa--tattagtacacttgctaaaagtctatcaa 446  Q
    |||||| |||||||| |||||||||||||  ||| ||||||||||||    |||||||||||||||   | |||||||||||| ||||||||||||||    
T  21335551 ttattgctaaattgaaattaacacagtcctcgtggatacaaacttat----tttattacttcgatacatttttagtacacttgttaaaagtctatcaa 21335458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 445
Target Start/End: Complemental strand, 4099383 - 4099291
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    |||||| |||||||| |||||||||||||  || ||||| |||||    ||||||||||||||||  | | ||||||||||||||||||||||||||    
T  4099383 ttattgctaaattgatattaacacagtcctcgtggatacgaactt----attttattacttcgatgcatttttagtacacttgctaaaagtctatca 4099291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 445
Target Start/End: Complemental strand, 21332532 - 21332440
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    |||||| |||||||| |||||||||||||  || ||||| |||||    ||||||||||||||||  | | ||||||||||||||||||||||||||    
T  21332532 ttattgctaaattgaaattaacacagtcctcgtggatacgaactt----attttattacttcgatacatttttagtacacttgctaaaagtctatca 21332440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 380
Target Start/End: Complemental strand, 22936827 - 22936769
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||| |||   || |||||| ||||||||||||||||||||||    
T  22936827 aaaataatttacacatcctaaatatttactttattgctaaattgagattaacacagtcc 22936769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 28442144 - 28442072
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| ||||| ||||||| ||||| |  |||||||||||||||    
T  28442144 ttcatgatattttgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataagattttgaagaaa 28442072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 33552366 - 33552488
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   ||  ||||||||||||||||||||||||||||  || ||||| |||||    ||||||||||||||||  | |    
T  33552366 aaaataatttatacatcctaaatatttactctattgttaaattgagattaacacagtcctcgtggatacgaactt----attttattacttcgatacatt 33552461  T
Q  419 attagtacacttgctaaaagtctatca 445  Q
     ||||||||| || |||||||||||||    
T  33552462 tttagtacacatgttaaaagtctatca 33552488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 14016990 - 14016927
Alignment:
Q  41 ttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  14016990 ttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 14016927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 41306448 - 41306355
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | || ||||||||||   |||||||| || ||| ||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  41306448 attttatgcaaaccaacctactgcctcacgcactaaaagaaattttcacatcctaaatatttaccttattgctaaattgagattaacacagtcc 41306355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 17663786 - 17663831
Alignment:
Q  105 taattttctgaagaatattgaagttcacaattattttgagcatgat 150  Q
    ||||||||||||| || ||| ||||||||| |||||||||||||||    
T  17663786 taattttctgaagtatcttggagttcacaactattttgagcatgat 17663831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 446
Target Start/End: Original strand, 30066556 - 30066679
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||  || ||||| ||| |    ||||||||||||||||  | |    
T  30066556 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaacct----attttattacttcgatgcatt 30066651  T
Q  419 attagtacacttgctaaaagtctatcaa 446  Q
     |||||||| ||||||||||| ||||||    
T  30066652 tttagtacatttgctaaaagtttatcaa 30066679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 445
Target Start/End: Complemental strand, 40799765 - 40799720
Alignment:
Q  400 attttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    ||||||||||||||||| | |||| ||||||||||||||| |||||    
T  40799765 attttattacttcgatatttttagcacacttgctaaaagtttatca 40799720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 292 - 448
Target Start/End: Complemental strand, 31427463 - 31427303
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-ga 386  Q
    ||||||||||||||||| |||||||||  |||||||| || ||||||||||||| |||   ||||||||| |||||||||||||||||||||   || ||    
T  31427463 ttttatgcaatcaaaaccactgcctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcttcgtgga 31427364  T
Q  387 tacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatcaaca 448  Q
    ||| |||||   |||||||||||||||||  | | |||||||||||||||||||||||||||||    
T  31427363 tacgaactt---aattttattacttcgatgcatttttagtacacttgctaaaagtctatcaaca 31427303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 292 - 446
Target Start/End: Original strand, 13518498 - 13518652
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| |||||||||| |||||| | | |||||||||||||||||   |||| |||||| ||| ||||||||||||||||||  || |||    
T  13518498 ttttatgcacacaaacctactgcctcaaacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggat 13518597  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    || |||||    ||||||||||||||||| | |||||||||||||||||||| ||||||    
T  13518598 acgaactt----attttattacttcgatagttttagtacacttgctaaaagtttatcaa 13518652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 25959612 - 25959520
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatccta---gataaccttattgttaaattgagattaacacagtc 379  Q
    ||||||||||| | |||||||||||||| | ||||||||||||||||||||||||   | ||||||||||| |||||||||||||||||||||    
T  25959612 attttatgcaaaccaaaactactgcctcaagcactaaaataatttacacatcctaaatgttaaccttattgctaaattgagattaacacagtc 25959520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 45454096 - 45454215
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgata-atatt-ag 423  Q
    |||||||||||||||||||   || |||||| ||||||||||||||||||||||  ||| |||||||||||   ||||||||||||||||  ||||| ||    
T  45454096 aatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacaaactta---attttattacttcgatgcatatttag 45454192  T
Q  424 tacacttgctaaaagtctatcaa 446  Q
    |||||||||||||||||||||||    
T  45454193 tacacttgctaaaagtctatcaa 45454215  T

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Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 380
Target Start/End: Original strand, 33310850 - 33310941
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||||||||||||   |||| |||||| ||||||||||||||||||||||    
T  33310850 tttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 33310941  T

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Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 380
Target Start/End: Original strand, 38015702 - 38015793
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||||||||||||   |||| |||||| ||||||||||||||||||||||    
T  38015702 tttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 38015793  T

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Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 25874363 - 25874456
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||  ||| ||||||||||||||||||||| |   ||||||||||| ||||||||||||||||||||||    
T  25874363 attttatgcaaaccaaaactactgcctcagacattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 25874456  T

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Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 303 - 380
Target Start/End: Original strand, 24235295 - 24235375
Alignment:
Q  303 caaaactactgcctcgaacactaaaataatttacacatccta---gataaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||  ||||||||||||||||||||||||     ||||||||||| ||||||||||||||||||||||    
T  24235295 caaaactactgcctcgggcactaaaataatttacacatcctaagtattaaccttattgctaaattgagattaacacagtcc 24235375  T

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Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 25870966 - 25871059
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || ||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  25870966 attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 25871059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 29440677 - 29440770
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || ||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  29440677 attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 29440770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 45499281 - 45499188
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   || ||||||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  45499281 attttatgcaaaccaaaactactgcctcaggcattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 45499188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 380
Target Start/End: Original strand, 24238567 - 24238647
Alignment:
Q  303 caaaactactgcctcgaacactaaaataatttacacatccta---gataaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| ||||  ||||||||||||||||||||||||     ||||||||||| ||||||||||||||||||||||    
T  24238567 caaaactactgtctcgggcactaaaataatttacacatcctaagtattaaccttattgctaaattgagattaacacagtcc 24238647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 446
Target Start/End: Complemental strand, 36808365 - 36808207
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-a 386  Q
    ||||||||||  |||| |||||||||| | |||| | | |||||||||||||||||||   ||||||||| |||||||||||||| |||||||  ||| |    
T  36808365 attttatgcacacaaacctactgcctcaatcacttataaaatttacacatcctagatattaaccttattgctaaattgagattaatacagtcctcgtgga 36808266  T
Q  387 tacaaacttataaattttattacttcgataatatt--agtacacttgctaaaagtctatcaa 446  Q
    ||| ||||||   |||||||||||||||||   ||  | |||||||||||||| ||||||||    
T  36808265 tacgaactta---attttattacttcgatatagtttaaatacacttgctaaaaatctatcaa 36808207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 45457384 - 45457503
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat-aata-ttag 423  Q
    |||||||||||||||||||   || |||||| ||||||||||||||||||||||  || ||||| |||||   |||||||||||||||||  ||| ||||    
T  45457384 aatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaactt---aattttattacttcgatgcatatttag 45457480  T
Q  424 tacacttgctaaaagtctatcaa 446  Q
    |||||||||||||| ||||||||    
T  45457481 tacacttgctaaaaatctatcaa 45457503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 9188575 - 9188484
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagt 378  Q
    ||||||||||| | ||||||||||||||   |||||||||||||||||||||||| |   ||||||||||| | ||||||||||||||||||    
T  9188575 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaaccttattgctgaattgagattaacacagt 9188484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 290 - 380
Target Start/End: Complemental strand, 40677683 - 40677589
Alignment:
Q  290 tattttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||| | ||||||||||||||   |||||||||||||||||||||||| |   ||| ||||||| |||||||| |||||||||||||    
T  40677683 tattttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgctaaattgaaattaacacagtcc 40677589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 446
Target Start/End: Complemental strand, 1506532 - 1506394
Alignment:
Q  308 ctactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattt 403  Q
    ||||||||||  ||||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| |||| || ||||    ||    
T  1506532 ctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttat----tt 1506437  T
Q  404 tattacttcgataatattagtacacttgctaaaagtctatcaa 446  Q
    ||||||||||||| | |||||||||||||||||| | ||||||    
T  1506436 tattacttcgatagttttagtacacttgctaaaattttatcaa 1506394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 9185347 - 9185254
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   |||||||||||||||||||||||| |   |||| |||||| | ||||||||||||||||||||    
T  9185347 attttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctgaattgagattaacacagtcc 9185254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 22020539 - 22020578
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22020539 aaaacgtgacacgattttgggcgaatttctgagcctattt 22020578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 30720080 - 30720142
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||||||||||||||||  ||| | |||||||||||||||||||| |||||    
T  30720080 gatacaaacttataaattttattacttcgatatatttttagtacacttgctaaaagtttatca 30720142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 437
Target Start/End: Complemental strand, 1503328 - 1503199
Alignment:
Q  308 ctactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattt 403  Q
    ||||||||||  ||||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| |||| || ||||    ||    
T  1503328 ctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttat----tt 1503233  T
Q  404 tattacttcgataatattagtacacttgctaaaa 437  Q
    ||||||||||||| | ||||||||||||||||||    
T  1503232 tattacttcgatagttttagtacacttgctaaaa 1503199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 292 - 437
Target Start/End: Original strand, 11059994 - 11060139
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gat 387  Q
    |||||||||  |||| ||||||||||  ||||| | | |||||||||||||||||   |||| |||||| ||| |||||||||||||||| |  || |||    
T  11059994 ttttatgcacacaaacctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagttctcgtggat 11060093  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaa 437  Q
    || |||||    ||||||||||||||||| | |||||||| |||||||||    
T  11060094 acgaactt----attttattacttcgatagttttagtacatttgctaaaa 11060139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 43723927 - 43724049
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcg--ataat 418  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||  || ||||| |||||    ||||||||||||||  ||| |    
T  43723927 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaactt----attttattacttcgatatatt 43724022  T
Q  419 attagtacacttgctaaaagtctatca 445  Q
     |||||||||||||||||| |||||||    
T  43724023 tttagtacacttgctaaaattctatca 43724049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 45453088 - 45453160
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  45453088 ttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 45453160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 27266259 - 27266298
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  27266259 aaaatgtgacacgattttgggcgaatttctgagcctattt 27266298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 37279599 - 37279506
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | |||| |||||||||   |||||||||||||||||||||||| |   |||| |||||| | ||||||||||||||||||||    
T  37279599 attttatgcaaaccaaaaatactgcctcaggcactaaaataatttacacatcctaaatattaactttattgctgaattgagattaacacagtcc 37279506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 445
Target Start/End: Original strand, 34682892 - 34683035
Alignment:
Q  303 caaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttata 398  Q
    |||| ||||||||||  ||||||||||||||||  |||||||||   ||||  ||||| ||||||||||||| || |||||  || ||||| |||||||     
T  34682892 caaacctactgcctcagacactaaaataatttattcatcctagatattaacactattgctaaattgagattaccatagtcctcgtggatacgaacttat- 34682990  T
Q  399 aattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
      |||||||| ||| |||  ||||||||||||| |||||| ||||||    
T  34682991 --ttttattatttctatagaattagtacacttgttaaaagactatca 34683035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 446
Target Start/End: Complemental strand, 13971789 - 13971666
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| |||||||||||||||| |||||  || ||||| |||||    ||||||||||||||||  | |    
T  13971789 aaaataatttatacatcctaaatattcactttattgctaaattgagattaacaaagtcctcgtggataccaactt----attttattacttcgatgcatt 13971694  T
Q  419 attagtacacttgctaaaagtctatcaa 446  Q
     |||||||||||||||||||| ||||||    
T  13971693 tttagtacacttgctaaaagtttatcaa 13971666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 1387057 - 1387017
Alignment:
Q  254 aaaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  1387057 aaaaacgtgacacgattttgggcgaaattctgtgcctattt 1387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 15470685 - 15470743
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||| |||   ||||||||| |||||||| |||||||||||||    
T  15470685 aaaataatttacacatcctaaatattaaccttattgctaaattgaaattaacacagtcc 15470743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 445
Target Start/End: Complemental strand, 15703854 - 15703739
Alignment:
Q  330 aatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||   |||| |||||| ||| |||| ||||||| |||||  || ||||| |||||    ||||||||||||||||| | |||||     
T  15703854 aatttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaactt----attttattacttcgatagttttagtg 15703759  T
Q  426 cacttgctaaaagtctatca 445  Q
    |||||||||||| |||||||    
T  15703758 cacttgctaaaaatctatca 15703739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 445
Target Start/End: Complemental strand, 15719158 - 15719043
Alignment:
Q  330 aatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||   |||| ||||||  || ||||||||||||||||||  || ||||| |||||    ||||||||||||| ||| | ||||||    
T  15719158 aatttacacatcctagatattaactttattgccaagttgagattaacacagtcctcgtggatacgaactt----attttattacttccatagttttagta 15719063  T
Q  426 cacttgctaaaagtctatca 445  Q
    |||||| ||||| |||||||    
T  15719062 cacttggtaaaaatctatca 15719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 36985698 - 36985626
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | |||||||| ||  |||| | ||||||||||||||||    
T  36985698 ttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcagaaaaaatagaagattttgaagaaa 36985626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 45456337 - 45456409
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | ||| |||| |||||||| |  |||||||||||||||    
T  45456337 ttcatgatgttttgagttcacaagcaagcttaaacaacaaagaaagcatgaaaaatacaagattttgaagaaa 45456409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 378
Target Start/End: Original strand, 3252516 - 3252605
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagt 378  Q
    ||||||||||||||| | ||||||||  ||||| | | |||||||||||||||||   |||| |||||| ||  ||||||||||||||||    
T  3252516 ttttatgcaatcaaaccaactgcctcagacacttataaaatttacacatcctagatattaactttattgctatgttgagattaacacagt 3252605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 446
Target Start/End: Original strand, 5666745 - 5666867
Alignment:
Q  325 aaaataatttacacatcctagata--accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcg--ataata 419  Q
    ||||||||||| |||||||| |||  || |||||| ||||||||||| ||| ||||||  || ||||| |||||    ||||||||||||||  ||| |     
T  5666745 aaaataatttatacatcctaaatattactttattgctaaattgagatcaacgcagtcctcgtagatacgaactt----attttattacttcgatatattt 5666840  T
Q  420 ttagtacacttgctaaaagtctatcaa 446  Q
    ||| |||||||||||||||||||||||    
T  5666841 ttaatacacttgctaaaagtctatcaa 5666867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 8888858 - 8888911
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  8888858 aatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 8888911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 31430592 - 31430529
Alignment:
Q  41 ttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  31430592 ttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 31430529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 38014682 - 38014745
Alignment:
Q  41 ttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  38014682 ttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 38014745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 9966922 - 9966888
Alignment:
Q  260 gtgacacgattttgggcgaatttctgagcctattt 294  Q
    |||||| ||||||||||||||||||||||||||||    
T  9966922 gtgacatgattttgggcgaatttctgagcctattt 9966888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 22020419 - 22020461
Alignment:
Q  200 cgtgtcacgattttaccagaccagaaaaacatgctttcgacgt 242  Q
    |||| |||||||| ||||||||||||||||||||| |||||||    
T  22020419 cgtgacacgatttcaccagaccagaaaaacatgctctcgacgt 22020461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 445
Target Start/End: Original strand, 30926846 - 30926891
Alignment:
Q  400 attttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    ||||||||||||||||| | ||| |||||||||||||| |||||||    
T  30926846 attttattacttcgatagttttaatacacttgctaaaaatctatca 30926891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 38460663 - 38460582
Alignment:
Q  363 ttgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    ||||||||||||||||||  || |||||||||||||    |||| |||||||||  | | ||||||||||||||||||||||||||    
T  38460663 ttgagattaacacagtcctcgtagatacaaacttat----tttactacttcgatgtatttttagtacacttgctaaaagtctatca 38460582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 15466207 - 15466279
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | ||| |||| || || || | ||||||||||||||||    
T  15466207 ttcatgatattttgagttcacaagcaagcttaaacaacaaagaaatcaagagaaatagaagattttgaagaaa 15466279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 25873240 - 25873312
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| | ||| ||||||| || || | ||||||||||||||||    
T  25873240 ttcatgatattttgagttcacaagcaagtttaaacaacaaagaaaacaagagaaatagaagattttgaagaaa 25873312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 30274692 - 30274598
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   |||||||| || |||| |||||||| |||   || |||||| ||||||||||||||||||||||    
T  30274692 attttatgcaaaccaaaactactgcctcagtcactaaaagaaatttatacatcctatatatttacgttattgctaaattgagattaacacagtcc 30274598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 436
Target Start/End: Original strand, 33749721 - 33749765
Alignment:
Q  393 cttataaattttattacttcgata-atattagtacacttgctaaa 436  Q
    |||||||||||||||||||||||| |  |||||||||||||||||    
T  33749721 cttataaattttattacttcgatataagttagtacacttgctaaa 33749765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 36809398 - 36809326
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||| ||||| | ||| ||||||| ||||| | ||||||||||| ||||    
T  36809398 ttcatgatattttgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagattttgaggaaa 36809326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 34732281 - 34732167
Alignment:
Q  291 attttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-ga 386  Q
    ||||||| |||||||||||| ||  |||| |||||||||||||||||||||||| |   || |||||||||||||||||||||||||||||| | || ||    
T  34732281 attttattcaatcaaaactagtgtttcgagcactaaaataatttacacatcctatatattagccttattgttaaattgagattaacacagtctctgtgga 34732182  T
Q  387 tacaaacttataaat 401  Q
    |||||||||||||||    
T  34732181 tacaaacttataaat 34732167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 303 - 445
Target Start/End: Complemental strand, 29643130 - 29642986
Alignment:
Q  303 caaaactactgcctcgaacactaaaataatttacacatcctag---ataaccttattgttaaattgagattaacacagtcccagt-gatacaaacttata 398  Q
    |||| ||||||||||| |||||||||||||||||||||| |||   ||||| |||||| ||||||||||||||||||||||  || ||||| |||||       
T  29643130 caaacctactgcctcggacactaaaataatttacacatcttagaaaataactttattgctaaattgagattaacacagtcctcgtggatacgaactt--- 29643034  T
Q  399 aattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
     ||||||||||||| ||  | | ||||||||||||||||||||||||||    
T  29643033 -attttattacttcaatgcatttttagtacacttgctaaaagtctatca 29642986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 34733240 - 34733154
Alignment:
Q  18 atttttattataaattcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||||||| |||||| ||||||||||||||||||| ||||| ||||| || ||||||| |||||||||||||||||||||||||||    
T  34733240 atttttattgtaaatttatgatcttttgagttcacaagcaagattaaacagtaaggaaatcatgaaaagttgaagattttgaagaaa 34733154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 28111258 - 28111351
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||  ||||||||||||||||||||||||| |   ||||||||||| ||||||||||||||||||||||    
T  28111258 attttatgcaaaccaaaactactgcctcagacactaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 28111351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 27536452 - 27536360
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||||||||||  |||||||| || ||||||||||||| |||   ||||||||| ||||||||||||||||||||||    
T  27536452 ttttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 27536360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 380
Target Start/End: Complemental strand, 37183784 - 37183693
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||||||||||||   |||| |||||| ||||||||||||||||||||||    
T  37183784 tttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacattattgctaaattgagattaacacagtcc 37183693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 380
Target Start/End: Complemental strand, 45960665 - 45960574
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||||||||||||   |||| |||||| ||||||||||||||||||||||    
T  45960665 tttatgcaatcaaaactactgcctcgggcactaaaagaaatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 45960574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 2794429 - 2794522
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||  ||| ||||||||||||||||||||| |   ||||||||||| ||||||||||||||||||||||    
T  2794429 attttatgcaaaccaaaactactgcctcagacattaaaataatttacacatcctaaatattaaccttattgctaaattgagattaacacagtcc 2794522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 3087560 - 3087499
Alignment:
Q  385 gatacaaacttataaattttattacttcgata-atattagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||    
T  3087560 gatacaaacttataaattttattacttcgatatattttagtacacttgttaaaagtctatca 3087499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 380
Target Start/End: Original strand, 31205041 - 31205132
Alignment:
Q  293 tttatgcaatcaaaactactgcctcgaacactaaaa-taatttacacatcctagat---aaccttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||| ||| |||||   ||| |||||| ||||||||||||||||||||||    
T  31205041 tttatgcaatcaaaactactgcctcgggcactaaaagaaatttacaaatcatagatataaacgttattgctaaattgagattaacacagtcc 31205132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 303 - 380
Target Start/End: Complemental strand, 3796736 - 3796656
Alignment:
Q  303 caaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||   |||||||||||||||||||||||| |   ||| ||||||| | ||||||||||||||||||||    
T  3796736 caaaactactgcctcatgcactaaaataatttacacatcctaaatattaaacttattgctgaattgagattaacacagtcc 3796656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 446
Target Start/End: Original strand, 34066533 - 34066595
Alignment:
Q  385 gatacaaacttataaattttattacttcgata-atattagtacacttgctaaaagtctatcaa 446  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||| |||||||| ||||||    
T  34066533 gatacgaacttataaattttattacttcgatatattttagtacacttactaaaagtttatcaa 34066595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 23441195 - 23441100
Alignment:
Q  290 tattttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtccc 381  Q
    |||||||||||| | ||||||||||||||   |||||||||||||||||||||||| |   ||| |||||||  ||||||| ||||||||||||||    
T  23441195 tattttatgcaaaccaaaactactgcctcaggcactaaaataatttacacatcctaaatattaatcttattgccaaattgaaattaacacagtccc 23441100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 49499531 - 49499459
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||||| ||||||||||||| ||||||||||| | ||| ||||||| ||||| | ||||||||||||||||    
T  49499531 ttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagattttgaagaaa 49499459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 20399054 - 20399146
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataa-tttacacatcctagata---accttattgttaaattgagattaacacagt 378  Q
    ||||||||||| | ||||||||||||||   |||||||| || |||||||||||||||||   || |||||| ||||||||||||||||||||    
T  20399054 attttatgcaaaccaaaactactgcctcaggcactaaaagaaatttacacatcctagatattaactttattgctaaattgagattaacacagt 20399146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 30938483 - 30938411
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaa 361  Q
    |||||||||  |||| |||||||||||  || |||||||||||||||||||||||   |||||||||||||||    
T  30938483 ttttatgcacacaaacctactgcctcgggcagtaaaataatttacacatcctagatagtaaccttattgttaa 30938411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 8435430 - 8435486
Alignment:
Q  391 aacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||||||||||  ||| | |||||||||||||||||||| |||||    
T  8435430 aacttataaattttattacttcgatatatttttagtacacttgctaaaagtttatca 8435486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 17618913 - 17618857
Alignment:
Q  391 aacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||||||||||  ||| | |||||||| |||||||||||||||||    
T  17618913 aacttataaattttattacttcgatatatttttagtacatttgctaaaagtctatca 17618857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 446
Target Start/End: Complemental strand, 21111035 - 21110912
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| |||||||||| |||||||||||  ||| |||| ||| |||    ||||||||||||||  | |    
T  21111035 aaaataatttatacatcctaaatatttactttattgctaaattgagagtaacacagtcctcgtggatacgaacatat----tttattacttcgatgcatt 21110940  T
Q  419 attagtacacttgctaaaagtctatcaa 446  Q
     |||||||||||||||||||||||||||    
T  21110939 tttagtacacttgctaaaagtctatcaa 21110912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 439
Target Start/End: Complemental strand, 22456550 - 22456494
Alignment:
Q  385 gatacaaacttataaattttattacttcga--taatattagtacacttgctaaaagt 439  Q
    ||||| ||||||||||||||||||||||||  || | ||||||||||||||||||||    
T  22456550 gatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagt 22456494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 437
Target Start/End: Original strand, 2405756 - 2405870
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||  || ||||| |||||    ||||||||||||||||  | |    
T  2405756 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaactt----attttattacttcgatacatt 2405851  T
Q  419 attagtacacttgctaaaa 437  Q
     ||||||||||||||||||    
T  2405852 tttagtacacttgctaaaa 2405870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 6071863 - 6071791
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    |||||| | ||||||||||||| ||||||||||| | |||| |||||||||||| |  |||||||||||||||    
T  6071863 ttcatgttgttttgagttcacaagcaagcttaaacaacaagaaaaacatgaaaaatacaagattttgaagaaa 6071791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 31204051 - 31204123
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||| || ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  31204051 ttcattatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 31204123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 380
Target Start/End: Original strand, 42022875 - 42022933
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| |||||||| |||   || |||||||||||||||||||||||||||||    
T  42022875 aaaataatttatacatcctaaatatttactttattgttaaattgagattaacacagtcc 42022933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 22448000 - 22447950
Alignment:
Q  391 aacttataaattttattacttcga--taatattagtacacttgctaaaagt 439  Q
    ||||||||||||||||||||||||  || | ||||||||||||||||||||    
T  22448000 aacttataaattttattacttcgatttatttttagtacacttgctaaaagt 22447950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 22453234 - 22453184
Alignment:
Q  391 aacttataaattttattacttcga--taatattagtacacttgctaaaagt 439  Q
    ||||||||||||||||||||||||  || | ||||||||||||||||||||    
T  22453234 aacttataaattttattacttcgatttatttttagtacacttgctaaaagt 22453184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 443
Target Start/End: Complemental strand, 23990193 - 23990132
Alignment:
Q  385 gatacaaacttataaattttattacttcgata---atattagtacacttgctaaaagtctat 443  Q
    ||||| ||||||||||||| ||||||||||||    | ||||||||||||||||||||||||    
T  23990193 gatacgaacttataaatttgattacttcgatatattttttagtacacttgctaaaagtctat 23990132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 27537167 - 27537104
Alignment:
Q  41 ttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  27537167 ttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 27537104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 45961661 - 45961598
Alignment:
Q  41 ttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaagaaa 103  Q
    ||||||||||||| ||||||||||| | |||||||| |||||||| |  |||||||||||||||    
T  45961661 ttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 45961598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 439
Target Start/End: Original strand, 49148086 - 49148142
Alignment:
Q  385 gatacaaacttataaattttattacttcga--taatattagtacacttgctaaaagt 439  Q
    ||||| ||||||||||||||||||||||||  || | ||||||||||| ||||||||    
T  49148086 gatacgaacttataaattttattacttcgatttatttttagtacacttactaaaagt 49148142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 445
Target Start/End: Complemental strand, 21018314 - 21018222
Alignment:
Q  352 ttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||| ||||||||||||  || ||||| |||||    ||||||||||||||||  | | ||||||||| || |||||||||||||    
T  21018314 ttattgttaaattgaggttaacacagtcctcgtggatacgaactt----attttattacttcgatgcatttttagtacacctgttaaaagtctatca 21018222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 28138656 - 28138600
Alignment:
Q  393 cttataaattttattacttcgata-atattagtacacttgctaaaagtctatcaaca 448  Q
    |||||||||||||||||||||||| |  ||||||||||||||||   ||||||||||    
T  28138656 cttataaattttattacttcgatataagttagtacacttgctaattatctatcaaca 28138600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 34732163 - 34732100
Alignment:
Q  385 gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatcaa 446  Q
    |||| |||||||||||||||||||||||| |  | | |||||||||||||||||| | ||||||    
T  34732163 gatataaacttataaattttattacttcggttcatttttagtacacttgctaaaaatttatcaa 34732100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 447
Target Start/End: Original strand, 228857 - 228996
Alignment:
Q  308 ctactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattt 403  Q
    ||||||||||  ||||| | | |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| |||| |||||    ||||    
T  228857 ctactgcctcagacacttataaaatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtgcatacgaactt----attt 228952  T
Q  404 tattacttcgataatattagtacacttgctaaaagtctatcaac 447  Q
    ||||||||||||| | ||||||||||||||||||||||||||||    
T  228953 tattacttcgatagttttagtacacttgctaaaagtctatcaac 228996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 223953 - 224069
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcc-cagtgatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| |||||||||||||||||| ||  ||||| |||||    ||||||||||||||||| | ||||||    
T  223953 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcatagatacgaactt----attttattacttcgatagttttagta 224048  T
Q  426 cacttgctaaaagtctatcaa 446  Q
    |||||||||||||||||||||    
T  224049 cacttgctaaaagtctatcaa 224069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 330 - 448
Target Start/End: Original strand, 90010 - 90130
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgat--aatattag 423  Q
    |||||||||||||||||||   || |||||| ||||||||||||||||||||||  ||| ||||||||||||    ||||||||||||||  | | ||||    
T  90010 aatttacacatcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacaaacttat----tttattacttcgatgcatttttag 90105  T
Q  424 tacacttgctaaaagtctatcaaca 448  Q
    |||||||||||||||||||||||||    
T  90106 tacacttgctaaaagtctatcaaca 90130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 89002 - 89071
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaag 100  Q
    |||||||| ||||||||||||| ||||||||||| | |||||||| |||||||| | |||||||||||||    
T  89002 ttcatgatgttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaagattttgaag 89071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 292 - 445
Target Start/End: Original strand, 10140 - 10296
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataa--tttacacatccta---gataaccttattgttaaattgagattaacacagtcccagt-g 385  Q
    |||||||||| |||| |||||||||||| |||||||||||  |||||||||||||    |||||| ||||| |||||||||||||| | |||||  || |    
T  10140 ttttatgcaaacaaacctactgcctcgagcactaaaataaactttacacatcctatataataaccatattgctaaattgagattaatagagtcctcgtgg 10239  T
Q  386 atacaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    | ||||||||||   ||||||||||| |||| | |||||||||||||||||  |||||||    
T  10240 aaacaaacttat---ttttattactttgatagttttagtacacttgctaaatatctatca 10296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 27356 - 27478
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aat 418  Q
    |||||||||||||||||||| |||   || |||||| ||||||||||||||||||||||  || ||||| |||||    ||||||||||||||||  | |    
T  27356 aaaataatttacacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaactt----attttattacttcgatgcatt 27451  T
Q  419 attagtacacttgctaaaagtctatca 445  Q
     ||||||||||||||||||||||||||    
T  27452 tttagtacacttgctaaaagtctatca 27478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 445
Target Start/End: Complemental strand, 48327 - 48173
Alignment:
Q  292 ttttatgcaatcaaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gat 387  Q
    ||||||||||||||| ||||||||||  | ||| | | ||| |||||||||| | ||   ||||||||| |||||||||||||||||||||   || |||    
T  48327 ttttatgcaatcaaacctactgcctcagaaacttataaaatatacacatcctcgttattaaccttattgctaaattgagattaacacagtcatcgtggat 48228  T
Q  388 acaaacttataaattttattacttcgataatattagtacacttgctaaaagtctatca 445  Q
    || ||||||||   ||||||||||| ||| | |||||||||||||||||  |||||||    
T  48227 acgaacttata---tttattacttcaatagttttagtacacttgctaaatatctatca 48173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 2732 - 2854
Alignment:
Q  325 aaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aat 418  Q
    ||||||||||| |||||||| |||   || |||||| ||||||||||||||||||||||  || ||||| |||||    ||||||||||||||||  | |    
T  2732 aaaataatttatacatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaactt----attttattacttcgatgcatt 2827  T
Q  419 attagtacacttgctaaaagtctatca 445  Q
     ||||||||||||||||||||||||||    
T  2828 tttagtacacttgctaaaagtctatca 2854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 437
Target Start/End: Complemental strand, 7224 - 7117
Alignment:
Q  331 atttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagtac 426  Q
    ||||||||||||||||||   || |||||| ||| ||||||||||||| ||||  ||| |||| |||||||   |||||||||||||||| | |||||||    
T  7224 atttacacatcctagatattaactttattgctaagttgagattaacaccgtcctcgtggatacgaacttat---ttttattacttcgatagttttagtac 7128  T
Q  427 acttgctaaaa 437  Q
    |||||||||||    
T  7127 acttgctaaaa 7117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 446
Target Start/End: Original strand, 2687 - 2803
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  || ||||| |||||    ||||||||||||||||| | | ||||    
T  2687 aatttacacatcctagatattaactttattgctaagttgagattaacacagtccttgtggatacgaactt----attttattacttcgatattttaagta 2782  T
Q  426 cacttgctaaaagtctatcaa 446  Q
    |||||| ||||||| ||||||    
T  2783 cacttggtaaaagtttatcaa 2803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 445
Target Start/End: Original strand, 6519 - 6634
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcccagtg-atacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||||   || |||||| ||| ||||||||||||||||||  ||| |||| || ||||    ||||||||||||||| | ||||||    
T  6519 aatttacacatcctagatattaactttattgctaagttgagattaacacagtcctcgtggatacgaatttat----tttattacttcgatatttttagta 6614  T
Q  426 cacttgctaaaagtctatca 445  Q
    |||||| ||||||| |||||    
T  6615 cacttggtaaaagtttatca 6634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 446
Target Start/End: Original strand, 7542 - 7605
Alignment:
Q  385 gatacaaacttataaattttattacttcg--ataatattagtacacttgctaaaagtctatcaa 446  Q
    ||||| |||||||||||||||||||||||  ||| | |||||||||||||||||||| ||||||    
T  7542 gatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaagtttatcaa 7605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 380
Target Start/End: Complemental strand, 5321 - 5228
Alignment:
Q  291 attttatgcaatc-aaaactactgcctcgaacactaaaataatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    ||||||||||| | ||||||||||||||   ||||||||||||||| |||||||| |||   || |||||  ||||||||||||||||||||||    
T  5321 attttatgcaaaccaaaactactgcctcaggcactaaaataatttatacatcctaaatatttactttatttctaaattgagattaacacagtcc 5228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 437
Target Start/End: Original strand, 20274 - 20408
Alignment:
Q  303 caaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttata 398  Q
    |||| |||||||||| | |||| | | |||||||||||||||||   |||| |||||| ||| ||||||||||||||||||  || ||||  |||||       
T  20274 caaacctactgcctcaagcacttataaaatttacacatcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatatgaactt--- 20370  T
Q  399 aattttattacttcgataatattagtacacttgctaaaa 437  Q
     |||||||||||||| || | ||||||||||||||||||    
T  20371 -attttattacttcggtagttttagtacacttgctaaaa 20408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 437
Target Start/End: Original strand, 13824 - 13958
Alignment:
Q  303 caaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttata 398  Q
    |||| ||||||||||  ||||| | | ||||||| |||||||||   |||| |||||| ||| ||||||||||||||||||  || ||||| |||||       
T  13824 caaacctactgcctcagacacttataaaatttacgcatcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt--- 13920  T
Q  399 aattttattacttcgataatattagtacacttgctaaaa 437  Q
     ||||||||||||||||| |  | |||||||||||||||    
T  13921 -attttattacttcgatagttcttgtacacttgctaaaa 13958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 437
Target Start/End: Original strand, 27840 - 27974
Alignment:
Q  303 caaaactactgcctcgaacactaaaataatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttata 398  Q
    |||| ||||||||||  ||||| | | ||||||| |||||||||   |||| |||||| ||| ||||||||||||||||||  || ||||| |||||       
T  27840 caaacctactgcctcagacacttataaaatttacgcatcctagaaattaactttattgctaagttgagattaacacagtcctcgtggatacgaactt--- 27936  T
Q  399 aattttattacttcgataatattagtacacttgctaaaa 437  Q
     ||||||||||||||||| |  | |||||||||||||||    
T  27937 -attttattacttcgatagttcttgtacacttgctaaaa 27974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 437
Target Start/End: Complemental strand, 118352 - 118221
Alignment:
Q  309 tactgcctcgaacactaaaataa-tttacacatcctagataa---ccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattt 403  Q
    ||||||||||  |||||||| || ||||||||||||||||||   | |||||||| |||||||||||||||| |||  || ||||| |||||||   |||    
T  118352 tactgcctcgggcactaaaagaaatttacacatcctagataataactttattgttgaattgagattaacacaatcctcgtggatacgaacttat---ttt 118256  T
Q  404 tattacttcgata-atattagtacacttgctaaaa 437  Q
    |||||||||||||  | |||||||||||| |||||    
T  118255 tattacttcgatagtttttagtacacttgttaaaa 118221  T

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Target: scaffold0062 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 445
Target Start/End: Complemental strand, 52766 - 52651
Alignment:
Q  330 aatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||   |||| |||||| ||| |||| ||||||| |||||  || ||||| |||||    ||||||||||||||||| | |||||     
T  52766 aatttacacatcctagatattaactttattgctaagttgaaattaacatagtcctcgtggatacgaactt----attttattacttcgatagttttagtg 52671  T
Q  426 cacttgctaaaagtctatca 445  Q
    |||||||||||| |||||||    
T  52670 cacttgctaaaaatctatca 52651  T

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Target: scaffold0062; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 445
Target Start/End: Complemental strand, 67715 - 67600
Alignment:
Q  330 aatttacacatcctaga---taaccttattgttaaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgataatattagta 425  Q
    |||||||||||||||||   |||| ||||||  || ||||||||||||||||||  || ||||| |||||    ||||||||||||| ||| | ||||||    
T  67715 aatttacacatcctagatattaactttattgccaagttgagattaacacagtcctcgtggatacgaactt----attttattacttccatagttttagta 67620  T
Q  426 cacttgctaaaagtctatca 445  Q
    |||||| ||||| |||||||    
T  67619 cacttggtaaaaatctatca 67600  T

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Target: scaffold0412 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 380
Target Start/End: Original strand, 372 - 425
Alignment:
Q  330 aatttacacatcctagata---accttattgttaaattgagattaacacagtcc 380  Q
    |||||||||||||||||||   || |||||| ||||||||||||||||||||||    
T  372 aatttacacatcctagatattaacgttattgctaaattgagattaacacagtcc 425  T

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Target: scaffold0084 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Original strand, 28854 - 28893
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  28854 aaaacgtgacacgattttgggcgaaattctgtgcctattt 28893  T

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Target: scaffold0056 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 68158 - 68119
Alignment:
Q  255 aaaacgtgacacgattttgggcgaatttctgagcctattt 294  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  68158 aaaacgtgacacgattttaggcgaatttctgtgcctattt 68119  T

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Target: scaffold0757 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 446
Target Start/End: Original strand, 5634 - 5720
Alignment:
Q  359 taaattgagattaacacagtcccagt-gatacaaacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatcaa 446  Q
    |||||||||||||| |||||||  || ||||| |||||    ||||||||||||||||  | | |||||||||||||||||||||||||||    
T  5634 taaattgagattaaaacagtcctcgtggatacgaactt----attttattacttcgatgcagttttagtacacttgctaaaagtctatcaa 5720  T

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Target: scaffold1657 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 282 - 226
Alignment:
Q  391 aacttataaattttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    |||||||||||||||||||||||||  | | ||| |||||||||||||| |||||||    
T  282 aacttataaattttattacttcgatgcatttttaatacacttgctaaaattctatca 226  T

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Target: scaffold0334 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 18500 - 18565
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagatttt 96  Q
    |||||||| ||||||||||||| ||||||||||| | ||| ||||||| ||||| | |||||||||    
T  18500 ttcatgatattttgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 18565  T

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Target: scaffold1684 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 437 - 369
Alignment:
Q  32 ttcatgatcttttgagttcaca-gcaagcttaaagagcaaggaaaacatgaaaagttgaagattttgaa 99  Q
    |||||||| ||||||||||||| ||||||||||| | |||||||  |||||||| |  |||||||||||    
T  437 ttcatgatgttttgagttcacaagcaagcttaaacaacaaggaacgcatgaaaaatacaagattttgaa 369  T

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Target: scaffold0520 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 445
Target Start/End: Complemental strand, 1351 - 1304
Alignment:
Q  400 attttattacttcgat--aatattagtacacttgctaaaagtctatca 445  Q
    ||||||||||||||||  | | ||||||||||||||||||||||||||    
T  1351 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 1304  T

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