View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8226_high_2 (Length: 720)

Name: NF8226_high_2
Description: NF8226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8226_high_2
NF8226_high_2
[»] chr5 (51 HSPs)
chr5 (328-681)||(27450410-27450763)
chr5 (40-275)||(27444469-27444716)
chr5 (499-681)||(39407364-39407546)
chr5 (494-681)||(34719652-34719839)
chr5 (499-681)||(26298269-26298451)
chr5 (502-681)||(26299805-26299984)
chr5 (499-681)||(34857305-34857487)
chr5 (499-679)||(19716143-19716318)
chr5 (509-681)||(34723670-34723835)
chr5 (499-676)||(39409103-39409266)
chr5 (499-677)||(27196039-27196217)
chr5 (499-678)||(34724754-34724921)
chr5 (499-675)||(10493949-10494125)
chr5 (499-671)||(3801364-3801536)
chr5 (499-629)||(32945021-32945151)
chr5 (499-671)||(38522861-38523033)
chr5 (499-671)||(15933128-15933303)
chr5 (499-671)||(10327898-10328070)
chr5 (541-671)||(1225319-1225449)
chr5 (513-671)||(3457794-3457956)
chr5 (498-671)||(27906066-27906239)
chr5 (572-677)||(28246693-28246799)
chr5 (499-668)||(20188944-20189113)
chr5 (499-677)||(36523713-36523895)
chr5 (499-610)||(5382825-5382936)
chr5 (499-671)||(31620836-31621008)
chr5 (499-669)||(1840687-1840857)
chr5 (499-673)||(26218013-26218187)
chr5 (499-673)||(41783291-41783465)
chr5 (503-671)||(18880160-18880328)
chr5 (502-673)||(14500709-14500880)
chr5 (505-671)||(20190591-20190756)
chr5 (499-675)||(28431030-28431194)
chr5 (499-668)||(2675987-2676156)
chr5 (499-671)||(29328008-29328183)
chr5 (509-639)||(39414181-39414312)
chr5 (499-677)||(1091086-1091263)
chr5 (543-673)||(30660951-30661081)
chr5 (508-671)||(19282123-19282286)
chr5 (499-576)||(28247473-28247550)
chr5 (499-671)||(31021831-31022003)
chr5 (559-666)||(11136067-11136173)
chr5 (509-677)||(24535969-24536137)
chr5 (499-671)||(32156946-32157109)
chr5 (503-643)||(17168447-17168589)
chr5 (518-629)||(40056382-40056493)
chr5 (584-673)||(30051420-30051509)
chr5 (617-652)||(34725175-34725210)
chr5 (604-671)||(43386695-43386762)
chr5 (298-332)||(27444736-27444770)
chr5 (630-671)||(11443284-11443325)
[»] chr1 (59 HSPs)
chr1 (499-681)||(38061178-38061360)
chr1 (499-677)||(28006312-28006490)
chr1 (498-662)||(7995948-7996112)
chr1 (499-675)||(29677519-29677695)
chr1 (505-677)||(40159636-40159808)
chr1 (498-677)||(47983217-47983396)
chr1 (509-677)||(5204479-5204647)
chr1 (499-677)||(15257171-15257349)
chr1 (496-677)||(50447303-50447484)
chr1 (499-673)||(7956290-7956464)
chr1 (498-639)||(24575909-24576050)
chr1 (499-668)||(35810689-35810858)
chr1 (499-671)||(39802767-39802939)
chr1 (499-671)||(24469817-24469989)
chr1 (499-671)||(32179826-32179998)
chr1 (499-666)||(48575080-48575247)
chr1 (499-669)||(45581008-45581178)
chr1 (499-671)||(36419069-36419241)
chr1 (499-671)||(47602862-47603034)
chr1 (499-671)||(15306461-15306633)
chr1 (508-668)||(31816539-31816699)
chr1 (499-671)||(42916114-42916286)
chr1 (499-671)||(46264944-46265116)
chr1 (499-602)||(6413276-6413379)
chr1 (498-668)||(25124884-25125054)
chr1 (508-669)||(20349116-20349277)
chr1 (508-671)||(7596361-7596524)
chr1 (499-612)||(15014342-15014455)
chr1 (499-668)||(42937045-42937214)
chr1 (499-675)||(27076515-27076691)
chr1 (508-669)||(45653441-45653601)
chr1 (499-671)||(7016075-7016247)
chr1 (499-671)||(37441186-37441358)
chr1 (499-637)||(7702837-7702975)
chr1 (499-632)||(44596524-44596657)
chr1 (499-671)||(31869562-31869734)
chr1 (499-597)||(7841665-7841762)
chr1 (499-673)||(21680656-21680830)
chr1 (499-600)||(12224575-12224676)
chr1 (499-668)||(23916781-23916950)
chr1 (507-671)||(23915605-23915769)
chr1 (499-671)||(36119040-36119211)
chr1 (508-669)||(20347638-20347797)
chr1 (508-673)||(19508494-19508659)
chr1 (497-617)||(14578583-14578703)
chr1 (548-658)||(14796569-14796679)
chr1 (548-658)||(14805443-14805553)
chr1 (562-673)||(43087529-43087640)
chr1 (502-671)||(15662917-15663086)
chr1 (566-673)||(13645247-13645354)
chr1 (573-668)||(40002865-40002960)
chr1 (503-671)||(3577638-3577807)
chr1 (569-657)||(33233620-33233708)
chr1 (576-673)||(8828303-8828400)
chr1 (508-568)||(9381756-9381816)
chr1 (604-648)||(15786879-15786923)
chr1 (499-626)||(30251437-30251565)
chr1 (543-639)||(51432247-51432343)
chr1 (502-576)||(572419-572493)
[»] chr4 (68 HSPs)
chr4 (499-676)||(1803461-1803633)
chr4 (498-678)||(24007902-24008082)
chr4 (505-677)||(12673034-12673206)
chr4 (498-677)||(40797792-40797971)
chr4 (499-677)||(46944544-46944722)
chr4 (497-677)||(80459-80639)
chr4 (505-677)||(51995040-51995212)
chr4 (505-673)||(9222138-9222304)
chr4 (499-677)||(55891985-55892163)
chr4 (499-660)||(51407949-51408110)
chr4 (497-677)||(25134536-25134704)
chr4 (499-643)||(13455697-13455841)
chr4 (499-677)||(28265673-28265848)
chr4 (511-649)||(34980516-34980654)
chr4 (499-668)||(48802475-48802645)
chr4 (499-668)||(49405635-49405804)
chr4 (499-671)||(15697083-15697255)
chr4 (499-671)||(53369840-53370012)
chr4 (499-669)||(22184473-22184643)
chr4 (499-671)||(11055226-11055398)
chr4 (508-668)||(36156303-36156463)
chr4 (499-671)||(45674803-45674975)
chr4 (499-671)||(48977544-48977716)
chr4 (495-673)||(44378216-44378382)
chr4 (499-671)||(9469745-9469917)
chr4 (499-671)||(19852946-19853118)
chr4 (499-671)||(21441549-21441721)
chr4 (499-671)||(50605976-50606148)
chr4 (496-671)||(36543749-36543924)
chr4 (499-653)||(12789552-12789706)
chr4 (573-675)||(50710844-50710946)
chr4 (538-671)||(43798262-43798395)
chr4 (500-668)||(19455159-19455327)
chr4 (499-671)||(22721296-22721467)
chr4 (499-671)||(26632904-26633076)
chr4 (507-677)||(39736645-39736815)
chr4 (499-669)||(56224115-56224285)
chr4 (499-668)||(48339099-48339268)
chr4 (512-671)||(44791256-44791415)
chr4 (548-677)||(25102646-25102775)
chr4 (499-668)||(50146918-50147087)
chr4 (499-671)||(52813569-52813741)
chr4 (499-669)||(48731173-48731343)
chr4 (499-673)||(52706183-52706357)
chr4 (559-639)||(7505529-7505609)
chr4 (499-639)||(9906356-9906496)
chr4 (548-671)||(49820950-49821073)
chr4 (499-600)||(4274556-4274657)
chr4 (502-671)||(27891355-27891523)
chr4 (543-668)||(43812101-43812226)
chr4 (508-637)||(52733710-52733838)
chr4 (499-639)||(48151126-48151266)
chr4 (497-639)||(6866107-6866243)
chr4 (541-667)||(24550049-24550176)
chr4 (503-597)||(9874212-9874306)
chr4 (499-600)||(38791731-38791831)
chr4 (594-671)||(53369656-53369733)
chr4 (508-668)||(32397707-32397867)
chr4 (508-591)||(28470867-28470949)
chr4 (497-596)||(36643983-36644081)
chr4 (508-639)||(49083243-49083374)
chr4 (499-589)||(9959382-9959471)
chr4 (499-582)||(43387314-43387397)
chr4 (597-671)||(16742423-16742497)
chr4 (499-557)||(50710784-50710842)
chr4 (552-625)||(50137407-50137480)
chr4 (615-671)||(43387236-43387292)
chr4 (604-669)||(38493082-38493147)
[»] chr3 (37 HSPs)
chr3 (499-677)||(12710664-12710842)
chr3 (499-677)||(40943523-40943701)
chr3 (499-677)||(30662131-30662309)
chr3 (499-677)||(20550202-20550380)
chr3 (500-671)||(26049541-26049712)
chr3 (496-677)||(54432174-54432369)
chr3 (499-668)||(54393443-54393612)
chr3 (499-671)||(9505121-9505293)
chr3 (496-671)||(39135322-39135497)
chr3 (499-668)||(33438731-33438900)
chr3 (499-671)||(32689137-32689309)
chr3 (499-671)||(52934780-52934952)
chr3 (520-675)||(15822370-15822525)
chr3 (505-671)||(41609856-41610021)
chr3 (518-672)||(48730856-48731010)
chr3 (499-671)||(39469531-39469703)
chr3 (499-671)||(46293213-46293385)
chr3 (505-671)||(39942806-39942972)
chr3 (499-671)||(44574494-44574666)
chr3 (499-639)||(52199429-52199569)
chr3 (499-672)||(19560774-19560947)
chr3 (503-671)||(26136301-26136469)
chr3 (499-671)||(25253670-25253842)
chr3 (617-681)||(49026577-49026641)
chr3 (505-671)||(28242551-28242717)
chr3 (503-600)||(45714735-45714832)
chr3 (562-673)||(5418644-5418755)
chr3 (501-671)||(23206310-23206479)
chr3 (559-671)||(50965371-50965484)
chr3 (559-671)||(51068506-51068619)
chr3 (514-639)||(31589622-31589747)
chr3 (498-618)||(30743593-30743713)
chr3 (592-668)||(53529683-53529759)
chr3 (592-671)||(52199357-52199436)
chr3 (509-639)||(1674629-1674759)
chr3 (593-638)||(29536598-29536643)
chr3 (572-671)||(28700965-28701064)
[»] chr7 (59 HSPs)
chr7 (500-677)||(18249994-18250171)
chr7 (499-677)||(46573612-46573790)
chr7 (499-677)||(17025361-17025539)
chr7 (499-677)||(18740218-18740396)
chr7 (499-677)||(33898944-33899122)
chr7 (499-677)||(26719782-26719960)
chr7 (499-677)||(35543556-35543731)
chr7 (497-673)||(36472410-36472586)
chr7 (499-675)||(49034224-49034400)
chr7 (499-677)||(21760583-21760761)
chr7 (497-677)||(33019269-33019448)
chr7 (498-671)||(7447849-7448022)
chr7 (499-677)||(32356928-32357106)
chr7 (500-671)||(36926972-36927143)
chr7 (499-671)||(5776130-5776302)
chr7 (547-677)||(30919389-30919519)
chr7 (498-671)||(37334251-37334424)
chr7 (503-643)||(31491816-31491956)
chr7 (513-671)||(29037794-29037952)
chr7 (496-669)||(22075038-22075211)
chr7 (499-672)||(28949758-28949931)
chr7 (499-671)||(5794936-5795108)
chr7 (499-659)||(33935493-33935653)
chr7 (499-671)||(42072056-42072228)
chr7 (499-671)||(43052845-43053017)
chr7 (499-671)||(44421901-44422074)
chr7 (499-671)||(665847-666019)
chr7 (499-639)||(33124700-33124840)
chr7 (508-671)||(45176218-45176381)
chr7 (499-671)||(222226-222398)
chr7 (498-668)||(37401565-37401735)
chr7 (503-671)||(3930720-3930888)
chr7 (505-673)||(45055699-45055867)
chr7 (505-671)||(10618894-10619060)
chr7 (499-673)||(11595796-11595970)
chr7 (499-668)||(3942152-3942321)
chr7 (499-671)||(20400969-20401141)
chr7 (499-671)||(33171534-33171706)
chr7 (499-673)||(40480050-40480225)
chr7 (498-671)||(48505794-48505960)
chr7 (499-673)||(23226999-23227173)
chr7 (499-673)||(23236152-23236326)
chr7 (560-671)||(48634420-48634531)
chr7 (558-639)||(23237576-23237657)
chr7 (499-671)||(27231539-27231711)
chr7 (496-671)||(10096444-10096619)
chr7 (499-668)||(17608688-17608854)
chr7 (561-671)||(26216245-26216355)
chr7 (505-600)||(388990-389085)
chr7 (573-671)||(15434216-15434314)
chr7 (499-617)||(37106853-37106971)
chr7 (500-589)||(41449795-41449884)
chr7 (548-639)||(37101148-37101238)
chr7 (499-586)||(46652633-46652720)
chr7 (562-671)||(2466579-2466689)
chr7 (576-664)||(37250014-37250102)
chr7 (499-570)||(6866681-6866752)
chr7 (494-528)||(15434321-15434355)
chr7 (606-667)||(23223561-23223622)
[»] chr6 (21 HSPs)
chr6 (499-675)||(3081718-3081894)
chr6 (499-677)||(13311984-13312164)
chr6 (499-675)||(7437268-7437444)
chr6 (499-668)||(5640252-5640421)
chr6 (497-668)||(10961794-10961965)
chr6 (508-675)||(18099780-18099947)
chr6 (499-671)||(4441301-4441473)
chr6 (508-639)||(18095519-18095650)
chr6 (499-629)||(17441168-17441298)
chr6 (499-671)||(1501816-1501988)
chr6 (499-671)||(6999235-6999407)
chr6 (499-671)||(10346689-10346861)
chr6 (502-673)||(33110424-33110595)
chr6 (499-671)||(8200610-8200771)
chr6 (499-668)||(9950760-9950929)
chr6 (499-671)||(11460014-11460178)
chr6 (546-668)||(27984937-27985059)
chr6 (566-673)||(22295882-22295989)
chr6 (545-639)||(32163541-32163635)
chr6 (523-639)||(21093268-21093384)
chr6 (576-671)||(30774006-30774101)
[»] chr2 (42 HSPs)
chr2 (499-675)||(40458885-40459061)
chr2 (502-669)||(11006977-11007142)
chr2 (543-666)||(13829851-13829974)
chr2 (498-640)||(27464571-27464713)
chr2 (499-671)||(3409188-3409360)
chr2 (499-671)||(27634639-27634811)
chr2 (499-671)||(33831463-33831635)
chr2 (509-671)||(10412408-10412570)
chr2 (499-668)||(11027879-11028048)
chr2 (498-671)||(36538624-36538797)
chr2 (553-677)||(1094419-1094543)
chr2 (499-677)||(29806879-29807046)
chr2 (498-670)||(34116172-34116344)
chr2 (500-666)||(30713129-30713295)
chr2 (502-659)||(44740486-44740643)
chr2 (516-670)||(32713013-32713168)
chr2 (501-671)||(26436322-26436491)
chr2 (498-671)||(41959111-41959284)
chr2 (559-668)||(2647034-2647143)
chr2 (499-668)||(27902439-27902607)
chr2 (543-675)||(2328335-2328467)
chr2 (511-671)||(34064673-34064833)
chr2 (541-668)||(38409613-38409740)
chr2 (525-669)||(12070540-12070684)
chr2 (503-637)||(24844670-24844804)
chr2 (499-610)||(20203714-20203825)
chr2 (499-629)||(16544016-16544146)
chr2 (509-635)||(17616271-17616397)
chr2 (499-629)||(33163980-33164110)
chr2 (505-627)||(41332243-41332365)
chr2 (562-671)||(2578047-2578156)
chr2 (508-648)||(9753098-9753237)
chr2 (503-635)||(17368994-17369125)
chr2 (499-567)||(40680281-40680349)
chr2 (499-614)||(28968845-28968960)
chr2 (528-599)||(31000880-31000951)
chr2 (593-671)||(39690138-39690216)
chr2 (614-669)||(18667721-18667776)
chr2 (508-630)||(45383147-45383269)
chr2 (614-671)||(33831395-33831452)
chr2 (569-669)||(34582854-34582954)
chr2 (604-669)||(40680191-40680256)
[»] scaffold0171 (1 HSPs)
scaffold0171 (498-655)||(21072-21228)
[»] scaffold0135 (1 HSPs)
scaffold0135 (505-673)||(32791-32957)
[»] chr8 (18 HSPs)
chr8 (499-671)||(453451-453623)
chr8 (498-675)||(22563970-22564147)
chr8 (499-639)||(1091727-1091867)
chr8 (498-668)||(33279976-33280146)
chr8 (499-671)||(3307902-3308074)
chr8 (505-671)||(11161540-11161706)
chr8 (507-600)||(43384833-43384926)
chr8 (507-668)||(34516109-34516270)
chr8 (499-599)||(39478090-39478190)
chr8 (509-639)||(27189092-27189222)
chr8 (499-600)||(12378391-12378492)
chr8 (496-673)||(34655001-34655178)
chr8 (499-673)||(43967476-43967650)
chr8 (543-662)||(23181132-23181251)
chr8 (499-671)||(9412524-9412696)
chr8 (623-677)||(39478052-39478106)
chr8 (623-681)||(12378350-12378408)
chr8 (590-663)||(10749310-10749383)
[»] scaffold0063 (1 HSPs)
scaffold0063 (507-667)||(51310-51470)
[»] scaffold0002 (1 HSPs)
scaffold0002 (499-671)||(96248-96420)
[»] scaffold0223 (1 HSPs)
scaffold0223 (499-668)||(14397-14566)
[»] scaffold0224 (1 HSPs)
scaffold0224 (499-671)||(7308-7480)
[»] scaffold0444 (1 HSPs)
scaffold0444 (495-673)||(775-941)
[»] scaffold0260 (2 HSPs)
scaffold0260 (508-669)||(11439-11600)
scaffold0260 (508-669)||(9961-10120)
[»] scaffold0316 (1 HSPs)
scaffold0316 (499-671)||(19264-19436)
[»] scaffold0022 (1 HSPs)
scaffold0022 (505-671)||(124487-124653)
[»] scaffold0204 (1 HSPs)
scaffold0204 (499-668)||(26621-26790)
[»] scaffold0954 (1 HSPs)
scaffold0954 (558-639)||(243-324)
[»] scaffold0263 (1 HSPs)
scaffold0263 (563-636)||(17238-17311)
[»] scaffold0025 (1 HSPs)
scaffold0025 (498-629)||(11400-11531)


Alignment Details
Target: chr5 (Bit Score: 342; Significance: 0; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 328 - 681
Target Start/End: Original strand, 27450410 - 27450763
Alignment:
Q  328 actagattaaactcttatagtcgtgttaattgtgcataccttttttgattcatggtataaggtagtgaaggtttttgagccttttcttgagctgcaacat 427  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27450410 actagattaaactcttatagtcgtgtaaattgtgcataccttttttgattcatggtataaggtagtgaaggtttttgagccttttcttgagctgcaacat 27450509  T
Q  428 aatcaaaattagtatgttgaagactactagatggattttgtgtctaataatgaactaacctgaatgtgaaatagggctggcaatgaaccgaaccaactcg 527  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27450510 aatcaaaattagtatgttgaagactactagatggattttgtgtctaataatgaactaacctgaatgtgaaatagggctggcaatgaaccgaaccaactcg 27450609  T
Q  528 aaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatg 627  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27450610 aaaatagtgcgagattcgattcgataattgattcgttgaatttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatg 27450709  T
Q  628 agttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 681  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27450710 agttgaacttgaactaaatgtggttcgactcgtttggttcatgaaccagcccga 27450763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 40 - 275
Target Start/End: Original strand, 27444469 - 27444716
Alignment:
Q  40 ggaaatttcttcttctgaggtggtggacggtt------tacttcaactgatgaagctactggttctggt------ggaggttcatatgtaatgtttacat 127  Q
    |||||||| |||||||||||||||||||||||      ||||||| |||||| ||||||||||||||||      |||||||||||||||||||||||||    
T  27444469 ggaaatttgttcttctgaggtggtggacggttgattattacttcatctgatggagctactggttctggtggtggtggaggttcatatgtaatgtttacat 27444568  T
Q  128 atgggttgaatgctaatggtaatggtggaggtggaaatttgttcttctgaggtggtggaggtgaatgtgtgcttctggttataagtgggtcatcactata 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27444569 atgggttgaatgctaatggtaatggtggaggtggaaatttgttcttctgaggtggtggaggtgaatgtgtgcttctggttataagtgggtcattactata 27444668  T
Q  228 agataacaaagaaaggaataattaagctgatcatgtacatgactacaa 275  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27444669 agataacaaagaaaggaataattaaactgatcatgtacatgactacaa 27444716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 499 - 681
Target Start/End: Complemental strand, 39407546 - 39407364
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39407546 tagggctggtaatgaaccgaaccaactcaaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 39407447  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 681  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39407446 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagtccga 39407364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 494 - 681
Target Start/End: Original strand, 34719652 - 34719839
Alignment:
Q  494 tgaaatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcga 593  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34719652 tgaattagggctggcaatgaaacgaaccaactcgaaaatagtgcgagatttgattcgataattgattcgttgaacttgattcatgaacttaatgagtcga 34719751  T
Q  594 acttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 681  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34719752 acttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagtccga 34719839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 499 - 681
Target Start/End: Complemental strand, 26298451 - 26298269
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26298451 tagggctggcaatgaaccgaaccaactcaaaaatagtgtgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcaaacttg 26298352  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 681  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26298351 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 26298269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 502 - 681
Target Start/End: Complemental strand, 26299984 - 26299805
Alignment:
Q  502 ggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagt 601  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  26299984 ggctggaaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttcattcatgaacctaatgagtcaaacttgagt 26299885  T
Q  602 ttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 681  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26299884 ttaaaattaagctcgttaaataaatgaattgaacttgaactaaatatggttcgactcgtttgattcatgaaccagcccga 26299805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 499 - 681
Target Start/End: Complemental strand, 34857487 - 34857305
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  34857487 tagggttggcaatgaaccgaaccaactcgaaaatagtgtgagattcaattcaataattgattcgttgaacttgattcatgaatctaatgagtcgaacttg 34857388  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 681  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34857387 agtttaaaattaagctcgttaaataaatgagttaaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 34857305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 499 - 679
Target Start/End: Complemental strand, 19716318 - 19716143
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||     
T  19716318 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgat-----aattgattcgttgaacttgattcatgaacctaatgagtcgaactta 19716224  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagccc 679  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19716223 agtttaaaattaagctcgttaaataaatgaattgaacttgaactaaatatggtttgactcgtttggttcatgaaccagccc 19716143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 509 - 681
Target Start/End: Original strand, 34723670 - 34723835
Alignment:
Q  509 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaat 608  Q
    |||||| ||||||||||||||||||||| ||||||       |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34723670 aatgaaacgaaccaactcgaaaatagtgtgagatt-------ataattgattcgttgaacttgattcatgaacctaatgagtcgaatttgagtttaaaat 34723762  T
Q  609 taagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 681  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34723763 taagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagtccga 34723835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 499 - 676
Target Start/End: Complemental strand, 39409266 - 39409103
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||    
T  39409266 tagggctggtaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattc--------------atgaacctaatgagtcgaacttg 39409181  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccag 676  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39409180 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccag 39409103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 499 - 677
Target Start/End: Complemental strand, 27196217 - 27196039
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| || ||| |||||||||| |||||||||||||||    
T  27196217 tagggctgacaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattgattcgttaaatttggttcatgaaccaaatgagtcgaacttg 27196118  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| |||||||||||||||| ||||| ||||||||||||| |||| |||| |||||||||| ||||||||||||||||    
T  27196117 agttgaaaattaagctcgttagataaaggagttgaacttgagctaagtatgattcgactcgtctggttcatgaaccagc 27196039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 499 - 678
Target Start/End: Original strand, 34724754 - 34724921
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34724754 tagggccggcaatgaaccgaaccaacttgaaaatagtgtgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 34724853  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcc 678  Q
    |||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||    
T  34724854 agtttaaaattaagctcgttaaataaatgagttgaac------------tggttcgactcgtttggttcatgaaccagcc 34724921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 10494125 - 10493949
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||| ||||||||  || ||||||||| ||||||| ||||||||||||| ||||  |||| |||||||||||||||    
T  10494125 tagggctggcaatgaaccgaaccaactcaaaaatagtttgatattcgattcaataattggttcgttgaacttggttcacaaaccaaatgagtcgaacttg 10494026  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  10494025 agttgaaaattaagctcgttaaataaatgagctgaacttgaactaagtatagttcgactcgtttggttcatgaacca 10493949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 3801364 - 3801536
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||| ||||| ||  |||||| |||| ||||| ||| ||||||||| |||||||||| |||||| ||||||||    
T  3801364 tagggctggcaatgaaccgaaccaactcgaatatagttcgtaattcgactcgacaattggttcattgaacttggttcatgaaccaaatgagccgaacttg 3801463  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||||||||||||||||| | ||||||||| ||||| |||||||||    
T  3801464 agctgaaaattaagttcgttaattaaatgagttgaacttgaactataaatggttcgattcgttaggttcatga 3801536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 499 - 629
Target Start/End: Original strand, 32945021 - 32945151
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||| |||||| |||||||||| |||||||||||||||    
T  32945021 tagggctgacaatgaaccgaaccaactcgaaaatagttcgaaactcgattcggtaattgattcgttaaacttggttcatgaaccaaatgagtcgaacttg 32945120  T
Q  599 agtttaaaattaagctcgttaaataaatgag 629  Q
    |||  |||||||||||||| |||||||||||    
T  32945121 agtcaaaaattaagctcgtcaaataaatgag 32945151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 38522861 - 38523033
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||| ||||| ||  ||| || |||||||||| | | ||||||||| |||||||||| |||||| | ||||||    
T  38522861 tagggctggcaatgaaccgaaccaactcgaatatagttcgtaatttgactcgataattggtccattgaacttggttcatgaaccaaatgagccaaacttg 38522960  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||||||| | ||||||||| ||||| |||||||||    
T  38522961 agctgaaaattaagttcgttaattaaatgagctgaacttgaactatagatggttcgattcgttgggttcatga 38523033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 15933303 - 15933128
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| |||| | || |||||||||||||| |||||||||||||||||| |||| ||    
T  15933303 tagggctggcaatgaaccgaaccaactcgagtatagttcgaaattcgactcgacagttaattcgttgaacttggttcatgaacctaatgagttgaacatg 15933204  T
Q  599 agtt---taaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || |   ||  |||||| ||||||||||||||||  |||||||| ||| | |||||||||||||||||||||||||    
T  15933203 agctaaatactattaagttcgttaaataaatgagccgaacttgagctatagatggttcgactcgtttggttcatga 15933128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 10328070 - 10327898
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||||||||||| || | | | |||||||| ||||||||||||||||||||||||||||||| ||||| || ||||||    
T  10328070 tagggctgacaatgaaccgaaccaactcgaaaattgttcaaaactcgattcggtaattgattcgttgaacttgattcatgaaccaaatgaatcaaacttg 10327971  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||  || ||||| ||||  |||||||||| || ||||||| |||  ||| ||||||||||||| ||||||||    
T  10327970 agtcgaatattaaactcgacaaataaatgaattaaacttgagctatgtatagttcgactcgttttgttcatga 10327898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 541 - 671
Target Start/End: Complemental strand, 1225449 - 1225319
Alignment:
Q  541 attcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaa 640  Q
    ||||||||||||||||| ||||||||||||  || ||||||| ||||||||||||||||||| |||||||||||||| ||||||||||   |||||||||    
T  1225449 attcgattcgataattgtttcgttgaacttagtttatgaaccaaatgagtcgaacttgagttgaaaattaagctcgtcaaataaatgaaccgaacttgaa 1225350  T
Q  641 ctaaatatggttcgactcgtttggttcatga 671  Q
    |||  |||  |||||||||||||||||||||    
T  1225349 ctacgtataattcgactcgtttggttcatga 1225319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 513 - 671
Target Start/End: Complemental strand, 3457956 - 3457794
Alignment:
Q  513 aaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagt----ttaaaat 608  Q
    |||||||||||||||||||||||  ||||||||||| | |||||  ||||||||||| ||||| |||||| ||||| ||||||||||||    | |||||    
T  3457956 aaccgaaccaactcgaaaatagtttgagattcgatttggtaattagttcgttgaactcgattcttgaaccaaatgaatcgaacttgagttaaataaaaat 3457857  T
Q  609 taagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||| ||||||||||||||||||| |||||| ||| |||| ||  ||||||||||||||||||    
T  3457856 taagttcgttaaataaatgagttggacttgagctatatatagtctgactcgtttggttcatga 3457794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 498 - 671
Target Start/End: Complemental strand, 27906239 - 27906066
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||||||||||||||||||||||||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||  | ||||    
T  27906239 atagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggactt 27906140  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||| | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||| ||| || ||||||    
T  27906139 gagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgacttgttaggctcatga 27906066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 572 - 677
Target Start/End: Complemental strand, 28246799 - 28246693
Alignment:
Q  572 attcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaac-taaatatggttcgactcgtttggttcatg 670  Q
    ||||| ||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  28246799 attcacgaaccaaatgagtcgaacttgagttgaaaattaaactcattaaataaatgagttgaacttgaacttaagtatgattcgactcgtttggttcatg 28246700  T
Q  671 aaccagc 677  Q
    |||||||    
T  28246699 aaccagc 28246693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 499 - 668
Target Start/End: Complemental strand, 20189113 - 20188944
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||| ||||||||  | ||| ||  ||| ||||||||||||||||||| ||||||| |||||||||| |||||| ||||||||    
T  20189113 tagggctgacaatgaaccgaatcaactcgattagagttcgtaatttgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 20189014  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |  | ||||||||| |||| || ||| |||| ||||||||| ||| || | |||||||||||||||||||    
T  20189013 aactaaaaattaagttcgtcaactaattgagctgaacttgagctatatgtagttcgactcgtttggttca 20188944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 499 - 677
Target Start/End: Complemental strand, 36523895 - 36523713
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| || ||||||||||||  |||||||| | ||| ||||| | ||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||    
T  36523895 tagggatgacaatgaaccgaattaactcgaataaagtccgagacttgattcgataatagattcattgaacttggttcatgaaccaaatgagtcgaacttg 36523796  T
Q  599 agtttaaaattaag----ctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    | || |||||||||     | |||||||||||||| ||||||||| |||  ||| ||| || |||||||||||||||||||||    
T  36523795 atttaaaaattaagttaatttgttaaataaatgagctgaacttgagctatgtatagtttgattcgtttggttcatgaaccagc 36523713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 499 - 610
Target Start/End: Original strand, 5382825 - 5382936
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||| ||||||||| ||||| ||| ||||| |||||||| ||||| ||||||||||||||||||||||||| || ||||||||| ||    
T  5382825 tagggctgacaatgaactgaaccaacttgaaaagagttcgagactcgattcggtaattaattcgttgaacttgattcatgaaccaaacgagtcgaacctg 5382924  T
Q  599 agtttaaaatta 610  Q
    ||||||||||||    
T  5382925 agtttaaaatta 5382936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 31621008 - 31620836
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||| ||| ||||| ||| |||||| |||| ||||  | | ||||| ||| |||||||||||||||||| ||||||     
T  31621008 tagggctgacaatgaaccgaaccaacttgaatatagttcgaaattcgactcgacaattagtccattgaatttggttcatgaacctaatgagttgaacttc 31620909  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | || |||||| ||||||| |||||||| |||||||||  || ||||  |||||||||||||||| ||||    
T  31620908 agctgaatattaagttcgttaattaaatgagctgaacttgagttacatataattcgactcgtttggttaatga 31620836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 499 - 669
Target Start/End: Original strand, 1840687 - 1840857
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| |||||||||||||||||||||||| |||||| |   | || |||||| |||| | |||||||||||| |||||||||| ||||||  |||||||    
T  1840687 tagggttggcaatgaaccgaaccaactcgacaatagttcagaactcaattcgacaattaactcgttgaacttggttcatgaaccaaatgagctgaacttg 1840786  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    || | ||||||||| |||| ||||||||||| |||||||||  |  |||| ||||| |||| |||||||||    
T  1840787 agctgaaaattaagttcgtgaaataaatgagctgaacttgagatgtatatagttcggctcggttggttcat 1840857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 499 - 673
Target Start/End: Complemental strand, 26218187 - 26218013
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||  |||||| || | ||| ||  | |||| ||| |||||  ||||||||||||| |||||||||| || ||| ||||||||    
T  26218187 tagggctggcaatgaaccgatacaactcaaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaacttg 26218088  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    || | || |||||| ||||||| |||||||||| |||||||  || |||| ||||||||||||||||||| ||||    
T  26218087 agctaaagattaagttcgttaactaaatgagttaaacttgagttatatatagttcgactcgtttggttcacgaac 26218013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 499 - 673
Target Start/End: Complemental strand, 41783465 - 41783291
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||  ||||||||| | ||| ||  | |||| ||| |||||  ||||||||||||| |||||||||| |||||| ||||||||    
T  41783465 tagggctgacaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaatgagccgaacttg 41783366  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    || | || |||||| ||||||| ||||||||||||||||||  || || | ||||||| ||||||||||| ||||    
T  41783365 agctaaagattaagttcgttaactaaatgagttgaacttgagttatatgtagttcgacccgtttggttcacgaac 41783291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 503 - 671
Target Start/End: Complemental strand, 18880328 - 18880160
Alignment:
Q  503 gctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtt 602  Q
    |||| |||||||||||||||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||  | |||| || |    
T  18880328 gctgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttaagct 18880229  T
Q  603 taaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
     ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| ||||||| ||| |||||    
T  18880228 gaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcaactcgttaggtacatga 18880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 502 - 673
Target Start/End: Original strand, 14500709 - 14500880
Alignment:
Q  502 ggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagt 601  Q
    |||||| ||||||||||  ||||||||| | ||| ||  | |||| |||||||||  ||||||||||||| |||||||||| || ||| ||||||||||     
T  14500709 ggctggaaatgaaccgatacaactcgaatacagttcggaactcgactcgataattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagc 14500808  T
Q  602 ttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    | || |||||| ||||||| | ||||||||||||||||  || |||| | ||||||||||||||||| ||||    
T  14500809 taaagattaagttcgttaactgaatgagttgaacttgagttatatatagctcgactcgtttggttcacgaac 14500880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 505 - 671
Target Start/End: Original strand, 20190591 - 20190756
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    |||||||||||||||||||||| |  | ||| ||  ||||||||||||||||||||| | ||||||| |||||||||| |||||| |||||||||| | |    
T  20190591 tggcaatgaaccgaaccaactctatta-agttcgtaattcgattcgataattgattcatcgaacttggttcatgaaccaaatgagccgaacttgagctca 20190689  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||||| ||| |   ||| |||| ||||||||| ||| || | |||||| |||||||||||||||    
T  20190690 aaattaagttcgctgcctaattgagctgaacttgagctatatgtagttcgaatcgtttggttcatga 20190756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 28431194 - 28431030
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||| |||||| |||||||||| ||||||| ||| |  ||||||||||||||| | |||||||||| |||||||||  ||||||| |||        
T  28431194 tagggctggca-tgaaccaaaccaactcgtaaatagttcgatacacgattcgataattgaattgttgaacttggttcatgaactaaatgagttgaa---- 28431100  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
           |||||||| ||||||||||| ||| ||||||||||||||||| ||||| | |||||||||||||||||||    
T  28431099 -------aattaagcccgttaaataaacgagctgaacttgaactaaataaggttcaaatcgtttggttcatgaacca 28431030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 668
Target Start/End: Complemental strand, 2676156 - 2675987
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| ||| |||||||| |||||| ||||  | ||| ||  ||||||| ||| ||||||||||| ||||| | |||||||||| |||||||||||||||    
T  2676156 tagggttggtaatgaaccaaaccaattcgattaaagttcgtaattcgatccgacaattgattcgtcgaactaggttcatgaaccaaatgagtcgaacttg 2676057  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || | ||||||||| |||| || ||| | | |||||||||||||| || |  ||||||||||||||||||    
T  2676056 agctgaaaattaagttcgtcaactaattaaattgaacttgaactatatgtaattcgactcgtttggttca 2675987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 29328183 - 29328008
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||| |||||||  ||||| ||| |||||| |||||| || || |||||||||||||||||||||||||  ||  | |||||    
T  29328183 tagggctgacaatgaaccgaacaaactcgattatagttcgacattcgactcgatatttaatccgttgaacttgattcatgaacctaa-cagctggacttg 29328085  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaac----taaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| | ||||||| |    || |||| |||||||||||| |||||||||    
T  29328084 agctgaaaattaagttcgttaattaaatgagcttaacttgagctacgtacatatagttcgactcgttaggttcatga 29328008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 509 - 639
Target Start/End: Complemental strand, 39414312 - 39414181
Alignment:
Q  509 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaac-ttgagtttaaaa 607  Q
    |||||||||||||||||||| |||||| ||| | |  |||||| |||| | |||||||||||| | |||||||||||||||  |||| || |||| ||||    
T  39414312 aatgaaccgaaccaactcgacaatagttcgaaacttaattcgacaattaactcgttgaacttggtccatgaacctaatgagctgaactttaagttaaaaa 39414213  T
Q  608 ttaagctcgttaaataaatgagttgaacttga 639  Q
    ||||| |||||||||||||||| |||||||||    
T  39414212 ttaagttcgttaaataaatgagctgaacttga 39414181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 677
Target Start/End: Complemental strand, 1091263 - 1091086
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| | ||||||||||||||||  |||| ||| | ||| |||||||||||||  |||||||||||||  ||||  |||  |||| ||||||||||    
T  1091263 tagggctgacgatgaaccgaaccaacttaaaaaaagttcaagactcgattcgataatgaattcgttgaacttagttcacaaactaaatgggtcgaacttg 1091164  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    || |||||| |||| || ||||||||||||||||||||||| |||   ||  ||||| |  ||||||||||||||||||    
T  1091163 ag-ttaaaaataagttcattaaataaatgagttgaacttgagctattcataattcgatttatttggttcatgaaccagc 1091086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 543 - 673
Target Start/End: Original strand, 30660951 - 30661081
Alignment:
Q  543 tcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaact 642  Q
    ||||||||||||||||||  ||||||||  |||||||||  ||||||  ||| || |||| ||||||||| | ||||| || |||||| |||| ||||||    
T  30660951 tcgattcgataattgatttattgaacttagttcatgaactaaatgagctgaatttaagttgaaaattaagtttgttaattatatgagtcgaacatgaact 30661050  T
Q  643 aaatatggttcgactcgtttggttcatgaac 673  Q
    | |||| ||||||||||||||||||||||||    
T  30661051 atatatagttcgactcgtttggttcatgaac 30661081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 508 - 671
Target Start/End: Original strand, 19282123 - 19282286
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||||| | |||||||||||| |||||| ||  | |  |||||| |||| | |||||||||||| |||||||||| ||||||  ||||||||| | ||||    
T  19282123 caatgagctgaaccaactcgataatagttcggaacttcattcgacaattaactcgttgaacttggttcatgaaccaaatgagctgaacttgagctgaaaa 19282222  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||| | ||||||| || ||||| ||||||||||||  |||| |||||||||| ||| |||||||    
T  19282223 ttaggttcgttaagtagatgagctgaacttgaactgtatatagttcgactcggttgattcatga 19282286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 499 - 576
Target Start/End: Complemental strand, 28247550 - 28247473
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattca 576  Q
    |||||||| |||||||||||||||| ||||||||||| ||| ||| |||| |||||||||||||||||||||| ||||    
T  28247550 tagggctgacaatgaaccgaaccaattcgaaaatagttcgatatttgatttgataattgattcgttgaacttggttca 28247473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 31022003 - 31021831
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||| ||| |||||||||||||||||||||| ||||| ||  | |||| ||||||||| | |||||||  ||| |||||||||| ||||||  ||| |||    
T  31022003 taggactgacaatgaaccgaaccaactcgaatatagttcggaactcgactcgataattaactcgttgagtttggttcatgaaccaaatgagctgaatttg 31021904  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || || |||||||| | ||||| |||||||| |||| || | ||| | || ||||| |||||||| |||||||    
T  31021903 agcttgaaattaagtttgttaactaaatgagctgaatttaagctatacatagttcgtctcgtttgattcatga 31021831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 559 - 666
Target Start/End: Original strand, 11136067 - 11136173
Alignment:
Q  559 ttcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactc 658  Q
    ||||||||||||| |||| ||||| || ||| |||||||||| | || |||||| ||||||| ||||||||||||||||||  || |||| |||||||||    
T  11136067 ttcgttgaacttggttca-gaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactc 11136165  T
Q  659 gtttggtt 666  Q
    ||||||||    
T  11136166 gtttggtt 11136173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 509 - 677
Target Start/End: Complemental strand, 24536137 - 24535969
Alignment:
Q  509 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaat 608  Q
    ||||||| ||||||||| ||||||||| | ||| |  ||| ||||||| ||| ||||||  || |||||||| | ||||||   || ||||| | |||||    
T  24536137 aatgaactgaaccaacttgaaaatagttcaagacttaatttgataattaatttgttgaatctggttcatgaatcaaatgagctaaatttgagctcaaaat 24536038  T
Q  609 taagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| |||||||||||| |||||||| || |||||  | ||| |||||| |||||| ||||||||||||    
T  24536037 taagttcgttaaataaacgagttgaatttaaactatgtttggctcgactagtttggatcatgaaccagc 24535969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 32156946 - 32157109
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||| ||||||||||||||||| ||||| ||||| ||  |||||| | || ||||| | | ||||||||| ||||||| || ||         ||||    
T  32156946 tagggctcgcaatgaaccgaaccaattcgaatatagttcgtaattcgacttgacaattggtccattgaacttgtttcatgagccaaa---------cttg 32157036  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||| ||||||||| ||||||| |||||||| ||||||||||||| | ||||||||| |||||  ||||||||    
T  32157037 agttgaaaattaagttcgttaattaaatgagctgaacttgaactatagatggttcgattcgttaagttcatga 32157109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 643
Target Start/End: Original strand, 17168447 - 17168589
Alignment:
Q  503 gctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtt 602  Q
    |||| ||||||||||||  ||||||||||||||  |||| | ||||||||| || ||| |||||||||| ||||  |||| |||||| ||||||| || |    
T  17168447 gctgacaatgaaccgaagtaactcgaaaatagtttgagactagattcgatatttaatttgttgaacttggttcacaaaccaaatgagccgaacttaagct 17168546  T
Q  603 --taaaattaagctcgttaaataaatgagttgaacttgaacta 643  Q
       ||||||||  |||||| ||||| |||||||||||||||||    
T  17168547 caaaaaattaacttcgttatataaacgagttgaacttgaacta 17168589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 629
Target Start/End: Original strand, 40056382 - 40056493
Alignment:
Q  518 aaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgt 617  Q
    ||||||||||| ||||||  || ||||||||||| ||||   |||||||| ||| |||||||||| ||| |||  || ||||| | ||||||||| ||||    
T  40056382 aaccaactcgataatagtttgaaattcgattcgacaattatctcgttgaatttggttcatgaaccaaataagttaaatttgagatgaaaattaagttcgt 40056481  T
Q  618 taaataaatgag 629  Q
    ||||||||||||    
T  40056482 taaataaatgag 40056493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 584 - 673
Target Start/End: Complemental strand, 30051509 - 30051420
Alignment:
Q  584 aatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    ||||| ||||| ||||| | ||||||||| | ||||| || |||||| |||| ||||||| |||| ||||||||||||| ||||||||||    
T  30051509 aatgaatcgaatttgagatgaaaattaagtttgttaattatatgagtcgaacatgaactatatatagttcgactcgtttagttcatgaac 30051420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 617 - 652
Target Start/End: Complemental strand, 34725210 - 34725175
Alignment:
Q  617 ttaaataaatgagttgaacttgaactaaatatggtt 652  Q
    ||||||||||||||||||||||||||||||||||||    
T  34725210 ttaaataaatgagttgaacttgaactaaatatggtt 34725175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 604 - 671
Target Start/End: Complemental strand, 43386762 - 43386695
Alignment:
Q  604 aaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||||||| || |||||||||||| ||||||||||  || | ||||||| |||||||||||||||||    
T  43386762 aaaattaagttctttaaataaatgaattgaacttgagttatagatggttcaactcgtttggttcatga 43386695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 298 - 332
Target Start/End: Original strand, 27444736 - 27444770
Alignment:
Q  298 gtaacacaaatgaccattttgaactctttcactag 332  Q
    |||||||||||||||||||||||||||||||||||    
T  27444736 gtaacacaaatgaccattttgaactctttcactag 27444770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 671
Target Start/End: Original strand, 11443284 - 11443325
Alignment:
Q  630 ttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||||||||||| | || ||||||||||||||||||||||    
T  11443284 ttgaacttgaactatacatagttcgactcgtttggttcatga 11443325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 2e-91; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 499 - 681
Target Start/End: Original strand, 38061178 - 38061360
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||     
T  38061178 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgatttgataattgattcgttgaacttgatttatgaacctaatgagtcgaactta 38061277  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 681  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38061278 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 38061360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 499 - 677
Target Start/End: Complemental strand, 28006490 - 28006312
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  28006490 tagggccggcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttg 28006391  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||||||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||||||||||||    
T  28006390 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatggttcgactcgtttagttcatgaaccagc 28006312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 498 - 662
Target Start/End: Complemental strand, 7996112 - 7995948
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||||| || |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  7996112 atagggttgacaatgaaccgaaccaacttgaaaatagttcgagattcgattcgataattgattcgttgaacttggttcataaacctaatgagtcgaactt 7996013  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgttt 662  Q
     ||||||||||||||||||||||||||||||| | |||||||| ||| |||||||||||||||||    
T  7996012 aagtttaaaattaagctcgttaaataaatgagctcaacttgaattaagtatggttcgactcgttt 7995948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 29677519 - 29677695
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||||| ||||||||||||| |||| ||||| |||||||||||||||    
T  29677519 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatactcgatttgataattggttcgttgaacttggttcacgaaccaaatgagtcgaacttg 29677618  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
    |||| |||||||||||| ||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||    
T  29677619 agttgaaaattaagctctttaaataaatgagctgaacttgaactaagtatagttcgactcgtttgcttcatgaacca 29677695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 505 - 677
Target Start/End: Original strand, 40159636 - 40159808
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||| ||| ||| ||||| |||||||| | ||||||||||||||||||| |    
T  40159636 tggcaatgaaccgaaccaactcgaaaatagtttgatattcgattcgataattggttcattggacttggttcatgaatcaaatgagtcgaacttgagttga 40159735  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  40159736 aaattaagttcgttaaataaatgagttgaacttgaacttagtatggttcgactcgtttggttcatgaaccagc 40159808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 498 - 677
Target Start/End: Complemental strand, 47983396 - 47983217
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||    
T  47983396 atagggttgacaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgatttgttgaacttggttcacgaaccaaatgagtcgaactt 47983297  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    ||||| |||  ||| ||||||||||||||||||||||||| |  ||| ||||||||||||||||||||||||||||||||    
T  47983296 gagttaaaatctaaactcgttaaataaatgagttgaacttaagttaagtatggttcgactcgtttggttcatgaaccagc 47983217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 509 - 677
Target Start/End: Original strand, 5204479 - 5204647
Alignment:
Q  509 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaat 608  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||| |||||    
T  5204479 aatgaatcgaaccaactcgaaaatagtttgagattcgattcgataattgactcgttgaacttggttcgtgaaccaaatgagtcgaacttgagttgaaaat 5204578  T
Q  609 taagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||||||||||| ||||||||| | | ||||||||||||||||||||||||||||||||    
T  5204579 taagttcgttaaataaatgagtcgaacttgaattgagtatggttcgactcgtttggttcatgaaccagc 5204647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 15257171 - 15257349
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||||| ||||||||  || | ||||||||||||||| ||| ||| ||||| |||||||||| |||||||||||||||    
T  15257171 tagggctgacaatgaaccgaaccaactcaaaaatagtttgatactcgattcgataattggttcattggacttggttcatgaaccaaatgagtcgaacttg 15257270  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||||||||||||| |||||||    
T  15257271 agttgaaaattaagctcgttaaataaatgagttgaatttgaacttagtatgattcgactcgtttggttcatcaaccagc 15257349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 496 - 677
Target Start/End: Complemental strand, 50447484 - 50447303
Alignment:
Q  496 aaatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaac 595  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||||| |||||| || ||||||| |||||| |||||    
T  50447484 aaatagggctgacaatgaaccaaaccaactcgaaaatagttcgagactcgattcgataattaattcgttaaacttggtttatgaaccaaatgagccgaac 50447385  T
Q  596 ttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    ||||  ||||||||||| ||||||||||||||||||||||||||||||  | ||  ||||||||||||||||||||||||||    
T  50447384 ttgaacttaaaattaagttcgttaaataaatgagttgaacttgaactatgtttgactcgactcgtttggttcatgaaccagc 50447303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 499 - 673
Target Start/End: Complemental strand, 7956464 - 7956290
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| ||||||||||||||||||||||||||||||| ||| | || |||||||||||| ||| ||| ||||| |||||||||  ||| |||||||||||    
T  7956464 tagggttggcaatgaaccgaaccaactcgaaaatagttcgatactcaattcgataattggttcattggacttggttcatgaacaaaattagtcgaacttg 7956365  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    | || ||||||||||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||    
T  7956364 aattgaaaattaagcttgttaaataaatgagttgaacttgaacttagtatgattcgactcgtttggttcatgaac 7956290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 498 - 639
Target Start/End: Complemental strand, 24576050 - 24575909
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||| |||||  |||||||    
T  24576050 atagggctgacaatgaaccgaaccaactcgaaaatagttcgagatttgattcgataattgactcgttgaacttggttcatgaaccaaatgaaacgaactt 24575951  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||    
T  24575950 gagttgaaaattaagcttgttaaataaatgagtcgaacttga 24575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 499 - 668
Target Start/End: Complemental strand, 35810858 - 35810689
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  | ||| ||  ||||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||    
T  35810858 tagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgagccgaacttg 35810759  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || | ||||||||| |||| |||||| ||||  |||||||||||| || | |||||||||||||||||||    
T  35810758 agctgaaaattaagttcgtcaaataattgagccgaacttgaactatatgtagttcgactcgtttggttca 35810689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 39802767 - 39802939
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||| |||||||||||||||||||| ||||| ||| ||||  | || ||||||||||| || |||||||||| |||||||||||||||    
T  39802767 tagggctggcaatgaatcgaaccaactcgaaaatagttcgagactcggttcggcagttaattcgttgaacatggttcatgaaccaaatgagtcgaacttg 39802866  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||| ||||||||| ||||||||||||||||  |||||||| |||  ||| | |||| |||||||||||||||    
T  39802867 agttgaaaattaagttcgttaaataaatgagccgaacttgagctatgtatagctcgattcgtttggttcatga 39802939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 24469817 - 24469989
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| |||||| || || ||||||||||| ||||||||||||| |||  | |||||    
T  24469817 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 24469916  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  24469917 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 24469989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 32179998 - 32179826
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| |||||| || || ||||||||||| ||||| |||||||||||  | |||||    
T  32179998 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcataaacctaatgagctggacttg 32179899  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  32179898 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttcggttcatga 32179826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 499 - 666
Target Start/End: Original strand, 48575080 - 48575247
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||| ||||| ||||||||| ||||||||||||||  |||| || ||||| ||||| |||||||||||||| |||||||||| || || |||||||||    
T  48575080 tagggccggcaaagaaccgaactaactcgaaaatagtatgagactcaattcggtaattaattcgttgaacttggttcatgaaccaaacgaatcgaacttg 48575179  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggtt 666  Q
    | |||||||||||| |||| |||||||||||||||||||||  ||| ||| ||||||| |||||||||    
T  48575180 aatttaaaattaagttcgtcaaataaatgagttgaacttgagttaagtatagttcgacccgtttggtt 48575247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 499 - 669
Target Start/End: Original strand, 45581008 - 45581178
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||| ||||||||| ||| | ||||||||||||||   |||||||||||| |||||||||| ||||||| |||||||    
T  45581008 tagggctgacaatgaaccgaaccaacttgaaaatagttcgaaactcgattcgataattatctcgttgaacttggttcatgaaccaaatgagttgaacttg 45581107  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    ||   ||||||||| || |||| |||||||| ||||| | | ||| |||||||||||||||||||||||||    
T  45581108 agcggaaaattaagttcattaactaaatgagatgaacattagctatatatggttcgactcgtttggttcat 45581178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 36419241 - 36419069
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| |||||| || || ||| ||||||| |||||||||||||||||  | |||||    
T  36419241 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgtcgaacttggttcatgaacctaatgagctggacttg 36419142  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||   ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  36419141 agccgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 36419069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 47602862 - 47603034
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||  ||||| ||| |||||| |||||| || || ||||||||||| ||||||||||||| |||  | |||||    
T  47602862 tagggctgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 47602961  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  47602962 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 47603034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 15306633 - 15306461
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||| || |||||| ||  | |||||||||||||| |||| ||||||||| |||||||||| ||||||  |||||||    
T  15306633 tagggctggcaatgaaccgaaccaacttgacaatagttcggaactcgattcgataattaattcattgaacttggttcatgaaccaaatgagctgaacttg 15306534  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||   ||||||||| || |||||||||||||  |||||||| ||  |||| |||||||||| |||||||||||    
T  15306533 agcggaaaattaagttcattaaataaatgagccgaacttgagctgtatatagttcgactcgattggttcatga 15306461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 508 - 668
Target Start/End: Complemental strand, 31816699 - 31816539
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||||||||||||||||||||||||||| ||| | || ||||| |||||||||||||||||||| |||||||||| ||||||| |||||| |||  ||||    
T  31816699 caatgaaccgaaccaactcgaaaatagttcgaaactcaattcggtaattgattcgttgaacttggttcatgaaccaaatgagttgaacttcagtcgaaaa 31816600  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |||||||||| |||||||||||  ||||||||  ||   ||  ||||||||||||||||||    
T  31816599 ttaagctcgtcaaataaatgagccgaacttgagttatggataattcgactcgtttggttca 31816539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 42916114 - 42916286
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| ||||||||||||||||||| ||||  |  || ||  ||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||||||    
T  42916114 taggggtggcaatgaaccgaaccaattcgattagtgttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 42916213  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||| ||| ||| |||| ||||||||||| | |||| | ||||||||||||||||||||    
T  42916214 agctgaaaattaagttcgctaactaattgagctgaacttgaaccatatataggtcgactcgtttggttcatga 42916286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 46264944 - 46265116
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| ||||||||||||||||||| ||||  |  || ||  ||||||||||||||||||||||| ||||||| |||||||||  |||||| ||||||||    
T  46264944 taggggtggcaatgaaccgaaccaattcgattagtgttcgtaattcgattcgataattgattcgtcgaacttggttcatgaactaaatgagccgaacttg 46265043  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||| ||| ||| |||| ||||||||||||| |||| | ||||||||||||||||||||    
T  46265044 agctgaaaattaagttcgctaactaattgagctgaacttgaactatatataggtcgactcgtttggttcatga 46265116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 499 - 602
Target Start/End: Complemental strand, 6413379 - 6413276
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||| || |||||||||| ||||| |||||||||    
T  6413379 tagggctggcaatgaatcgaaccaactcgaaaatagttcgagattcgatttgataattgattcgttgaacctggttcatgaaccaaatgaatcgaacttg 6413280  T
Q  599 agtt 602  Q
    ||||    
T  6413279 agtt 6413276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 498 - 668
Target Start/End: Original strand, 25124884 - 25125054
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||||||||||||||||||||||||||||||  | ||| ||  |||||||| |||||||||||||||||||||| |||||||||| |||||| |||||||    
T  25124884 atagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgatttgataattgattcgttgaacttggttcatgaaccaaatgagccgaactt 25124983  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    ||| | ||||||||  |||| || ||| |||| ||||||||| ||| || | ||||  |||||||||||||    
T  25124984 gagctgaaaattaatttcgtgaactaattgagctgaacttgagctatatgtagttcagctcgtttggttca 25125054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 508 - 669
Target Start/End: Complemental strand, 20349277 - 20349116
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||||||||||||||||||||| |||||   | ||| || ||||||||| ||||||||||||||||||||  ||| |||||| ||||||| || | ||||    
T  20349277 caatgaaccgaaccaactcgaacatagtttaaaatttgactcgataattaattcgttgaacttgattcatataccaaatgagccgaacttcagatgaaaa 20349178  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    ||||| ||||||| |||||||| |||| |||||||| ||||  |||||||||||||||||||    
T  20349177 ttaagttcgttaattaaatgagctgaatttgaactatatataattcgactcgtttggttcat 20349116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 508 - 671
Target Start/End: Complemental strand, 7596524 - 7596361
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||||||||||||||||||||  | ||| ||  ||| ||||||||||||||||||| ||||||| || ||||||| |||||| |||||||||| | ||||    
T  7596524 caatgaaccgaaccaactcgattagagttcgtaatttgattcgataattgattcgtcgaacttggtttatgaaccaaatgagccgaacttgagctgaaaa 7596425  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||| ||| ||| ||| |||| ||||||||||||| || | |||||||||||||| |||||||    
T  7596424 ttaagttcgctaactaattgagctgaacttgaactatatgtagttcgactcgtttgattcatga 7596361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 499 - 612
Target Start/End: Complemental strand, 15014455 - 15014342
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| ||||||||||||||||||||||||  | ||| ||  ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  15014455 tagggttggcaatgaaccgaaccaactcgattagagttcgtaattcgattcgataattgattcgtcgaacttgattcatgaaccaaatgagccgaacttg 15014356  T
Q  599 agtttaaaattaag 612  Q
    |||| |||||||||    
T  15014355 agttgaaaattaag 15014342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 499 - 668
Target Start/End: Complemental strand, 42937214 - 42937045
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||| ||||||||||||  | ||| ||  ||||||||| | ||||||||||| ||||||| |||||||| | |||||| ||||||||    
T  42937214 tagggctggcaatgaactgaaccaactcgattagagttcgtaattcgattcaacaattgattcgtcgaacttggttcatgaatcaaatgagccgaacttg 42937115  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || ||||||||||| |||| || ||| |||| ||||||||| |||  ||| |||| ||||||||||||||    
T  42937114 agcttaaaattaagttcgtcaactaattgagctgaacttgagctatgtatagttcaactcgtttggttca 42937045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 27076515 - 27076691
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||  ||||||||| |||||||||   ||| | |||||||||||| |||||||||||||| | |||||||  |||||| ||||||||    
T  27076515 tagggctgacaatgaattgaaccaacttgaaaatagtttaagacttgattcgataattaattcgttgaacttggtccatgaactaaatgagccgaacttg 27076614  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
    || | ||| ||||| |||||||||||| |||||||||||||||||  | ||  || | |||||||||||||||||||    
T  27076615 agctcaaagttaagttcgttaaataaacgagttgaacttgaactatgtttgactcaattcgtttggttcatgaacca 27076691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 508 - 669
Target Start/End: Original strand, 45653441 - 45653601
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    ||||||||||| |||||||||||||||| | | | ||||||||| ||||  ||||||||||||| |||||||||| |||||| |||||||||| | |||     
T  45653441 caatgaaccga-ccaactcgaaaatagttcaaaactcgattcgacaattatttcgttgaacttggttcatgaaccaaatgagccgaacttgagctaaaag 45653539  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    ||||| ||||||  |||||||  ||||| ||||||| |||| |||||||||||||| |||||    
T  45653540 ttaagttcgttagctaaatgaactgaacatgaactatatatagttcgactcgtttgattcat 45653601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 7016075 - 7016247
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||| | | | ||||| ||||||||| |||||||| |||||||||| |||||||||| ||||||  |||||||    
T  7016075 tagggctgacaatgaaccgaaccaactcgaacaaaattcgagactcgattcgacaattgatttgttgaacttggttcatgaaccaaatgagctgaacttg 7016174  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | |||| |||| | |||||   ||| || ||| ||||| ||| ||| |||||||||||||||| ||||||    
T  7016175 agctcaaaactaagtttgttaacctaataagctgagcttgagctatatacggttcgactcgtttgggtcatga 7016247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 37441186 - 37441358
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||| ||||| ||  ||||| ||| |||| | ||||||  | || ||||||||||| ||||||||||||| |||  | |||||    
T  37441186 tagggctggcaatgaaccgaatcaactagattatagttcgacattcaactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 37441285  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||| ||||    
T  37441286 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttaatga 37441358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 499 - 637
Target Start/End: Complemental strand, 7702975 - 7702837
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| |||||| || || ||||||||||| |||||||| |||| |||  | |||||    
T  7702975 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaagctaacgagctggacttg 7702876  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaactt 637  Q
    || | ||||||||| ||||||| |||||||| |||||||    
T  7702875 agctgaaaattaagttcgttaattaaatgagctgaactt 7702837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 632
Target Start/End: Complemental strand, 44596657 - 44596524
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||||| ||||||  |  | ||||||||| |||| | |||||||| ||| |||||||||| ||||||  |||||||    
T  44596657 tagggctggcaatgaaccgaaccaactcgacaatagtttggaactcgattcgacaattaactcgttgaatttggttcatgaaccaaatgagctgaacttg 44596558  T
Q  599 agtttaaaattaagctcgttaaataaatgagttg 632  Q
    |  | ||||||||| |||||||||||||||||||    
T  44596557 aactgaaaattaagttcgttaaataaatgagttg 44596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 31869734 - 31869562
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||| | ||||||||||||| || |||| |||||| ||  | | ||||||| |||| | |||||||||||| |||||||||| |||||| |||||||     
T  31869734 tagggccgacaatgaaccgaactaattcgacaatagttcggaacttgattcgacaattaaatcgttgaacttggttcatgaaccaaatgagccgaactta 31869635  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||||||||||||  |||||||| ||  ||||  ||||||||| |||||||||||    
T  31869634 agctgaaaattaagttcgttaaataaatgagccgaacttgagctgtatataattcgactcggttggttcatga 31869562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 597
Target Start/End: Complemental strand, 7841762 - 7841665
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||||||| |||||||||||||||||||||||||| | ||||| |||||||||||||| |||||||||||||| |||||||||| |||||  |||||||    
T  7841762 tagggctgtcaatgaaccgaaccaactcgaaaatatt-cgagactcgattcgataattaattcgttgaacttggttcatgaaccaaatgaaccgaactt 7841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 673
Target Start/End: Original strand, 21680656 - 21680830
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| |||||||||||||||||| |||||||||||| ||| | ||||||||||||||   |||||||||||| || |||||   |||||| ||||||||    
T  21680656 tagggttggcaatgaaccgaaccagctcgaaaatagttcgaaactcgattcgataattatctcgttgaacttggtttatgaatgaaatgagccgaacttg 21680755  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    || | ||||||||| ||||||  |||| ||  ||||| | ||||| |||| |||| ||| |||| ||||||||||    
T  21680756 agctaaaaattaagttcgttagctaaacgaactgaacataaactacatatagttcaacttgtttagttcatgaac 21680830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 600
Target Start/End: Original strand, 12224575 - 12224676
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||||||| |||||| ||  ||||||||||| |||| | |||||||||||| |||||||||| |||||| ||||||||    
T  12224575 tagggctgacaatgaaccgaaccaactcgacaatagttcggaattcgattcgacaattaactcgttgaacttggttcatgaaccaaatgagccgaacttg 12224674  T
Q  599 ag 600  Q
    ||    
T  12224675 ag 12224676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 668
Target Start/End: Complemental strand, 23916950 - 23916781
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||| |||||||||||  | ||| ||  ||||||||||||||||||||| |  |||||| ||||| |||| |||||| | ||||||    
T  23916950 tagggctgacaatgaaccaaaccaactcgattaaagttcgtaattcgattcgataattgattcatcaaacttggttcattaaccaaatgagcctaacttg 23916851  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || | ||||||||| |||| || ||| |||| ||||||||| | | || | |||||||||||||||||||    
T  23916850 agctgaaaattaagttcgtcaactaattgagctgaacttgagcaatatgtagttcgactcgtttggttca 23916781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 507 - 671
Target Start/End: Original strand, 23915605 - 23915769
Alignment:
Q  507 gcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaa 606  Q
    |||||||| ||||||||||||| || ||| ||| | ||||||| | ||||   |||||||||||| |||||||||| ||||||  |||||| || | |||    
T  23915605 gcaatgaatcgaaccaactcgacaaaagttcgaaactcgattcaacaattatctcgttgaacttggttcatgaaccaaatgagctgaactttagctgaaa 23915704  T
Q  607 attaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||| || |||||||||||||||||||||||  |  |||| |||||||||| |||||| ||||    
T  23915705 attaagttcattaaataaatgagttgaacttgagttgtatatagttcgactcgattggttaatga 23915769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 36119211 - 36119040
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||||  |||||||| ||| ||||||||||| ||||   |||| ||||||| || ||||||| |||||   |||||||    
T  36119211 tagggctgacaatgaaccgaaccaactaaaaaatagttcgaaattcgattcgacaattttctcgtcgaacttggtttatgaaccaaatgaactgaacttg 36119112  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || || |||| ||| | ||||| |||| ||| ||||||||||||| ||||  ||||| |||||||||||||||    
T  36119111 ag-ttcaaatgaagtttgttaactaaacgagctgaacttgaactatatataattcgattcgtttggttcatga 36119040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 508 - 669
Target Start/End: Complemental strand, 20347797 - 20347638
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||||||||||| ||||||||| |||||   | ||| || |||| |||| |||||||||| |||||||||| ||| |||||| ||||||| || | ||||    
T  20347797 caatgaaccgaatcaactcgaatatagtttaaaatttgactcgacaattaattcgttgaatttgattcatgtaccaaatgagccgaacttaagatgaaaa 20347698  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    ||||| ||||||| |||||||| |||| ||| |||  ||||  |||||||||||||||||||    
T  20347697 ttaagttcgttaattaaatgagctgaatttgtact--atataattcgactcgtttggttcat 20347638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 508 - 673
Target Start/End: Complemental strand, 19508659 - 19508494
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||||||||||  ||||||||| | ||| ||  | |||| ||| |||||  ||||||||||||| |||||||||| || ||| |||||||||| | || |    
T  19508659 caatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaaga 19508560  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    ||||| ||||||| |||||||||||| |||||  || |||| |||||||| |||||||||| ||||    
T  19508559 ttaagttcgttaactaaatgagttgaccttgagttatatatagttcgacttgtttggttcacgaac 19508494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 497 - 617
Target Start/End: Original strand, 14578583 - 14578703
Alignment:
Q  497 aatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaact 596  Q
    |||||||||| |||||||||||||||||||||  | ||| ||  |||||||| || |||||||| |||||||||| |||||||||| |||||| ||||||    
T  14578583 aatagggctgacaatgaaccgaaccaactcgattagagttcgtaattcgattagacaattgatttgttgaacttggttcatgaaccaaatgagccgaact 14578682  T
Q  597 tgagtttaaaattaagctcgt 617  Q
     ||| | ||||||||| ||||    
T  14578683 ggagctgaaaattaagttcgt 14578703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 548 - 658
Target Start/End: Complemental strand, 14796679 - 14796569
Alignment:
Q  548 tcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaata 647  Q
    ||||||||| ||||||||||| || |||||||||| | | ||| ||||||||  || |||||||| ||||||||||||||||||||||||  |||| |||    
T  14796679 tcgataattaattcgttgaacgtggttcatgaaccaattaagttgaacttgaactttaaattaagttcgttaaataaatgagttgaactttgactatata 14796580  T
Q  648 tggttcgactc 658  Q
    | |||||||||    
T  14796579 tagttcgactc 14796569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 548 - 658
Target Start/End: Complemental strand, 14805553 - 14805443
Alignment:
Q  548 tcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaata 647  Q
    ||||||||| ||||||||||| || |||||||||| | | ||| ||||||||  || |||||||| ||||||||||||||||||||||||  |||| |||    
T  14805553 tcgataattaattcgttgaacgtggttcatgaaccaattaagttgaacttgaactttaaattaagttcgttaaataaatgagttgaactttgactatata 14805454  T
Q  648 tggttcgactc 658  Q
    | |||||||||    
T  14805453 tagttcgactc 14805443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 562 - 673
Target Start/End: Original strand, 43087529 - 43087640
Alignment:
Q  562 gttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtt 661  Q
    |||||||||| |||||||||| || ||| |||||||||  | || |||||| ||||||| ||||||||||||||||||  || |||| |||||| |||||    
T  43087529 gttgaacttggttcatgaaccaaacgagccgaacttgaactaaagattaagttcgttaattaaatgagttgaacttgagttatatatagttcgattcgtt 43087628  T
Q  662 tggttcatgaac 673  Q
    ||||||| ||||    
T  43087629 tggttcacgaac 43087640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 502 - 671
Target Start/End: Complemental strand, 15663086 - 15662917
Alignment:
Q  502 ggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagt 601  Q
    ||||| ||||||||||||||||||| |  | |||  |  |||| |||| ||||||||||||| ||||||| |||||| ||| |||||| ||||||||||     
T  15663086 ggctgacaatgaaccgaaccaactcaattagagtttgtaattcaattcaataattgattcgtcgaacttggttcatgtaccaaatgagccgaacttgagc 15662987  T
Q  602 ttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    | ||||||||| |||| || ||| |||   |||||| | ||| || | ||||||||| ||||||||||||    
T  15662986 tgaaaattaagttcgtcaactaattgaaccgaacttaagctatatgtagttcgactcttttggttcatga 15662917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 566 - 673
Target Start/End: Original strand, 13645247 - 13645354
Alignment:
Q  566 aacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggt 665  Q
    |||||| |||||||| | || ||| |||||||||| | || |||||| ||||||| ||||||||||||| ||||  || |||| ||||||||| ||||||    
T  13645247 aacttggttcatgaatcaaacgagccgaacttgagctaaagattaagttcgttaagtaaatgagttgaatttgagttatatatagttcgactcatttggt 13645346  T
Q  666 tcatgaac 673  Q
    ||||||||    
T  13645347 tcatgaac 13645354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 573 - 668
Target Start/End: Complemental strand, 40002960 - 40002865
Alignment:
Q  573 ttcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |||||||| | |||||| |||||||||||| ||||||||| |||| || ||| |||||||||||||| ||| || | |||||||||||||| ||||    
T  40002960 ttcatgaatcaaatgagccgaacttgagttgaaaattaagttcgtcaactaattgagttgaacttgagctatatgtagttcgactcgtttgattca 40002865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 671
Target Start/End: Complemental strand, 3577807 - 3577638
Alignment:
Q  503 gctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaa-cttgagt 601  Q
    |||| ||||||||||||| ||||||| ||||||  |  | ||||||||| | || | |||||||||||| |||||||| | ||||| |  || ||||||     
T  3577807 gctgacaatgaaccgaactaactcgacaatagtttggaactcgattcgacagttaactcgttgaacttggttcatgaatcaaatgaattaaaacttgagc 3577708  T
Q  602 ttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    | |||| | |  |||||||||||||||| ||||||||| ||| || | |||||||||| |||||| ||||    
T  3577707 tgaaaaattaattcgttaaataaatgagctgaacttgagctatatgtagttcgactcggttggtttatga 3577638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 569 - 657
Target Start/End: Original strand, 33233620 - 33233708
Alignment:
Q  569 ttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgact 657  Q
    |||||||||||| | ||| ||| ||||||||| | ||||||||| ||||||| |||| ||||| ||||||| ||| ||||| |||||||    
T  33233620 ttgattcatgaatcaaataagttgaacttgagctgaaaattaaggtcgttaactaaacgagtttaacttgagctatatatgtttcgact 33233708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 576 - 673
Target Start/End: Original strand, 8828303 - 8828400
Alignment:
Q  576 atgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    ||||||| ||||| | ||||||||| | |||||||||   ||||| ||||| |||||||||||| ||| | ||  ||||||||||||| |||||||||    
T  8828303 atgaaccaaatgaattgaacttgagctgaaaattaagtctgttaactaaataagttgaacttgagctagacataattcgactcgtttgattcatgaac 8828400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 568
Target Start/End: Complemental strand, 9381816 - 9381756
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaac 568  Q
    |||||||||||||||||||||||||| | |||||| ||| ||| |||||  ||||||||||    
T  9381816 caatgaaccgaaccaactcgaaaatatttcgagatccgaatcggtaattagttcgttgaac 9381756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 648
Target Start/End: Complemental strand, 15786923 - 15786879
Alignment:
Q  604 aaaattaagctcgttaaataaatgagttgaacttgaactaaatat 648  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||    
T  15786923 aaaattaagctcgttaaataaatgcgttcaacttgagctaaatat 15786879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 626
Target Start/End: Complemental strand, 30251565 - 30251437
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaa-atagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||| || ||||||||| |||||| |||||| ||||| | | | | |||||||||||| | |||||||  ||| |||||||||  ||||| | ||||||    
T  30251565 tagggttgacaatgaaccaaaccaattcgaaacatagttcaaaacttgattcgataattaactcgttgagtttggttcatgaactaaatgaattgaactt 30251466  T
Q  598 gagtttaaaattaagctcgttaaataaat 626  Q
    ||| | ||||||||| ||||||| |||||    
T  30251465 gagctaaaaattaagttcgttaactaaat 30251437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 543 - 639
Target Start/End: Original strand, 51432247 - 51432343
Alignment:
Q  543 tcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    ||||||| | |||| | |||||| ||||| |||||||||| ||||||| ||| || || | ||||||||  ||||||||||||| || |||||||||    
T  51432247 tcgattcaacaattaactcgttgtacttggttcatgaaccaaatgagttgaaattaagctgaaaattaaaatcgttaaataaattagctgaacttga 51432343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 572419 - 572493
Alignment:
Q  502 ggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattca 576  Q
    ||||| ||||||| ||| | |||||||| | ||| ||||| |||| ||||||||||||| |||||||||| ||||    
T  572419 ggctgacaatgaatcgagcaaactcgaacaaagttcgagactcgactcgataattgatttgttgaacttggttca 572493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 4e-74; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 499 - 676
Target Start/End: Complemental strand, 1803633 - 1803461
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||     |||||||||||| |||||||||||||||||||||||||||||||||    
T  1803633 tagggctgacaatgaaccgaaccaactcgaaaagagtgcgagattcgat-----aattgattcgttaaacttgattcatgaacctaatgagtcgaacttg 1803539  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccag 676  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1803538 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcataaaccag 1803461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 498 - 678
Target Start/End: Original strand, 24007902 - 24008082
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||||||| |||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||||||| ||||  |||||    
T  24007902 atagggctgacaatgaattgaaccaactcgaaaatagttcgagattcgatttgatgattgattcgttgaacttggttcatgaacctaacgagttaaactt 24008001  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcc 678  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24008002 gagtttaaaattaagttcgttaaataaatgagttgaacttgagctaaatatggttcgactcgtttggttcatgaaccagcc 24008082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 505 - 677
Target Start/End: Original strand, 12673034 - 12673206
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||| |    
T  12673034 tggcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttgagttga 12673133  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    ||||||||||| |||||||||||||| ||||||||  | | ||||||||||||||||||||||||||||||||    
T  12673134 aaattaagctcattaaataaatgagtcgaacttgagttgagtatggttcgactcgtttggttcatgaaccagc 12673206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 498 - 677
Target Start/End: Complemental strand, 40797971 - 40797792
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||| ||||||||||||||||||||||| |||||||| ||| | | ||||||||||||| ||| ||||||||| |||||||||| ||||||||||||||    
T  40797971 ataggactggcaatgaaccgaaccaactcaaaaatagttcgatacttgattcgataattggttcattgaacttggttcatgaaccaaatgagtcgaactt 40797872  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  40797871 gagttgaaaattaagctcgttaaataaatgagttgaacttgaacttagtatggttcgactcgtttggttcatgaaccagc 40797792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 46944544 - 46944722
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||  |||||||||||| |||||||||| |||||||||||||||    
T  46944544 tagggctgacaatgaaccgaaccaactcaaaaatagttcgagattcgattcgataattggctcgttgaacttggttcatgaaccaaatgagtcgaacttg 46944643  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||| ||||||||||||||||||| ||| ||||||||  | | ||||||||||||||||||||||||||||||||    
T  46944644 agttgaaatttaagctcgttaaataaataagtcgaacttgagttgagtatggttcgactcgtttggttcatgaaccagc 46944722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 497 - 677
Target Start/End: Complemental strand, 80639 - 80459
Alignment:
Q  497 aatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaact 596  Q
    |||||||||||||||||||||| |||||||||||||||| ||| ||| |||||| |||||| ||||||||||||| |||||||||| |||||||||||||    
T  80639 aatagggctggcaatgaaccgatccaactcgaaaatagttcgaaatttgattcggtaattgtttcgttgaacttggttcatgaaccaaatgagtcgaact 80540  T
Q  597 tgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||||| |||||||||||||| |||||||||||  ||||||||||||  |||  |||||||||||||||||||||||||||    
T  80539 tgagttgaaaattaagctcgtcaaataaatgagccgaacttgaactacgtataattcgactcgtttggttcatgaaccagc 80459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 505 - 677
Target Start/End: Complemental strand, 51995212 - 51995040
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||| |||||| |||||||||| | |    
T  51995212 tggcaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattaattcgttgaacttggttcatgaaccaaatgagccgaacttgagctca 51995113  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||||||| | |||||||||| |||||||||||||||||  | ||  ||||||||||||||||||||||||||    
T  51995112 aaattaagtttgttaaataaacgagttgaacttgaactatgtttgactcgactcgtttggttcatgaaccagc 51995040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 505 - 673
Target Start/End: Original strand, 9222138 - 9222304
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||| ||||| ||||||||||||| ||||   ||| |||||||||||||||||||      
T  9222138 tggcaatgaaccgaaccaactcgaaaatagttcgatactcgattcgacaattggttcgttgaacttggttcac--accaaatgagtcgaacttgagttgt 9222235  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||    
T  9222236 aaattaagctcgttaaataaatgaattgaacttgaacttagtatggttcgactcgtctggttcatgaac 9222304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 55891985 - 55892163
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||| |||||||||| |||||||| ||||| |||||||| ||||| |||||||||||||| |||||||||| || ||||||||| ||    
T  55891985 tagggctgacaatgaactgaaccaactcaaaaatagttcgagactcgattcggtaattaattcgttgaacttggttcatgaaccaaacgagtcgaacctg 55892084  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
     ||||||||||||| |||| ||| ||||||||||||||||| | || ||| |||| | |||||||||||||||||||||    
T  55892085 ggtttaaaattaagttcgtcaaacaaatgagttgaacttgagccaagtatagttcaattcgtttggttcatgaaccagc 55892163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 499 - 660
Target Start/End: Original strand, 51407949 - 51408110
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||| ||||||||||||||||||| ||||| |||||||| ||||| ||||||| |||||| |||||||||| |||||||||||| ||    
T  51407949 tagggctgacaatgaactgaaccaactcgaaaatagttcgagactcgattcggtaattaattcgttcaacttggttcatgaaccaaatgagtcgaacctg 51408048  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgt 660  Q
     ||||||||||||| |||| ||| ||||||||||||||||||| || ||| |||||||||||    
T  51408049 ggtttaaaattaagttcgtcaaacaaatgagttgaacttgaaccaagtatagttcgactcgt 51408110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 497 - 677
Target Start/End: Complemental strand, 25134704 - 25134536
Alignment:
Q  497 aatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaact 596  Q
    |||||||||| ||||||||||||||||||||||||||||            | |||||||| ||  ||| ||||| |||||||||| |||||||||||||    
T  25134704 aatagggctgacaatgaaccgaaccaactcgaaaatagt------------tggataattggtttattggacttggttcatgaaccaaatgagtcgaact 25134617  T
Q  597 tgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  25134616 tgagttgaaaattaagttcgttaaataaatgagttgaacttgaacttagtatggttcgactcgtttggttcatgaaccagc 25134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 499 - 643
Target Start/End: Complemental strand, 13455841 - 13455697
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||| ||||||||||||| ||||||| |  ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||||    
T  13455841 tagggctgacaataaaccgaaccaacttgaaaataatttgagattcgattcgataattaattcgttgaacttgatttatgaaccaaatgagtccaacttg 13455742  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaacta 643  Q
    || | ||||||||| |||||||||||| |||||||||||||||||    
T  13455741 agctcaaaattaagttcgttaaataaacgagttgaacttgaacta 13455697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 28265673 - 28265848
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||||||| || ||   |||  ||    
T  28265673 tagggctggcaatgaactgaaccaactcgaaaatagttcgagactcgattcggtaattaattcgttgaacttggttcatgaaccaaacga---gaatctg 28265769  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||||||||||||| |||| ||| ||||||||||||||||| | || | | |||||||||||||||||||||| |||||    
T  28265770 agtttaaaattaagttcgtcaaacaaatgagttgaacttgagccaagtgtagttcgactcgtttggttcatgagccagc 28265848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 511 - 649
Target Start/End: Original strand, 34980516 - 34980654
Alignment:
Q  511 tgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaatta 610  Q
    |||||| ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||| |||||||    
T  34980516 tgaaccaaaccaactcgaaaatagtttgagactcgattcgataattgattcattgaacttgattcatgaatcaaatgaatcgaacttgagttgaaaatta 34980615  T
Q  611 agctcgttaaataaatgagttgaacttgaactaaatatg 649  Q
    | |||| |||||||||||||| || |||| |||||||||    
T  34980616 aactcgctaaataaatgagttaaatttgagctaaatatg 34980654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 48802475 - 48802645
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgtt-gaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||||||| |||||||||||||||||||||||||||| ||| | |||||| | | |||||||  || |||||||||||||||||| ||||||||||||||    
T  48802475 tagggctgacaatgaaccgaaccaactcgaaaatagttcgaaactcgatttggttattgatttttttgaacttgattcatgaaccaaatgagtcgaactt 48802574  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    ||||  |||||||||||||| |||||||||||  |||||||| |||   || |||||||||||||||||||    
T  48802575 gagtcgaaaattaagctcgtcaaataaatgagccgaacttgagctatgaatagttcgactcgtttggttca 48802645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 49405635 - 49405804
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||| |||||||||| ||| | |||||||| |||||||||||||||||||| || ||||||| |||||||||||||||    
T  49405635 tagggctgacaatgaaccgaaccaacccgaaaatagttcgaaactcgattcggtaattgattcgttgaacttggtttatgaaccaaatgagtcgaacttg 49405734  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    | |  |||||||||||||| |||||||||||  ||||||||  ||   || |||||||||||||| ||||    
T  49405735 aatcgaaaattaagctcgtcaaataaatgagccgaacttgagttatggatagttcgactcgtttgattca 49405804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 15697083 - 15697255
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||  ||||||||| | ||| ||||| |||| |||| |||||||||||||||||||||||||||||| ||| ||  |||||||    
T  15697083 tagggctgacaatgaaccgagacaactcgaataaagttcgagactcgactcgacaattgattcgttgaacttgattcatgaaccaaataagctgaacttg 15697182  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| | |||||| ||||| ||||||||| || || |||||||||||||||||||    
T  15697183 agctaaaaattaagttcgttaacttaatgagctgaacatgaactaaacatagtccgactcgtttggttcatga 15697255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 53370012 - 53369840
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||| | |||||| || || ||||||||||| ||||||||||||| |||  | |||||    
T  53370012 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcaactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 53369913  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  53369912 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 53369840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 499 - 669
Target Start/End: Complemental strand, 22184643 - 22184473
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||||| ||||||  | || ||||||||| |||| | |||||||||||| |||||||||| || |||  |||||||    
T  22184643 tagggctggcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 22184544  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    || | ||||||||| |||||||| ||||||| ||||||||||||  |||| |||||||||  |||||||||    
T  22184543 agctgaaaattaagttcgttaaacaaatgagctgaacttgaactttatatagttcgactcagttggttcat 22184473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 11055226 - 11055398
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||||||| |||||| ||  | |||||||||||||| | || ||||||||| |||||||||| ||||||  |||||||    
T  11055226 tagggctgacaatgaaccgaaccaactcgacaatagttcggaactcgattcgataattaactcattgaacttggttcatgaaccaaatgagctgaacttg 11055325  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||   ||||||||| ||||||||||||||||  |||||||| ||  |||| |||||||||| |||||||||||    
T  11055326 agcggaaaattaagttcgttaaataaatgagccgaacttgagctgtatatagttcgactcgattggttcatga 11055398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 508 - 668
Target Start/End: Original strand, 36156303 - 36156463
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||||||||||||||||||||  | ||| ||  ||||||||||| ||||||||||||||||||| ||| |||||| |||||| |||||||||| | ||||    
T  36156303 caatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcttgaaccaaatgagccgaacttgagctgaaaa 36156402  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    ||||| |||| || ||| |||| ||||||||||||| || | |||||||||||||||||||    
T  36156403 ttaagttcgtcaactaattgagctgaacttgaactatatgtagttcgactcgtttggttca 36156463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 45674975 - 45674803
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| ||||||  | || ||| ||||||| ||||||||||||| |||  | |||||    
T  45674975 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgtcgaacttggttcatgaacctaacgagctggacttg 45674876  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||  ||||||| |||||||||||||||||| ||| |||| |||||||||||| |||||||||    
T  45674875 agctgaaaattaaattcgttaattaaatgagttgaacttgagctacatatagttcgactcgttaggttcatga 45674803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 48977716 - 48977544
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||| | ||| |||||| |||||| || |||||||||||||  |||||||||||||||||  | || ||    
T  48977716 tagggctggcaatgaaccgaaccaactcgattataattcgacattcgactcgatatttaattcgttgaacttcgttcatgaacctaatgagctggacatg 48977617  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||  ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  48977616 agctgaaaattaaattcgttaattaaatgagctgaacttgagctacatatagttcgactcgttcggttcatga 48977544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 495 - 673
Target Start/End: Complemental strand, 44378382 - 44378216
Alignment:
Q  495 gaaatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaa 594  Q
    |||||||||||| |||||||||||||||| |||||||||||  |||| ||||||||            ||||||||| |||||||||| ||||||| |||    
T  44378382 gaaatagggctgccaatgaaccgaaccaattcgaaaatagtttgagactcgattcg------------ttgaacttggttcatgaaccaaatgagttgaa 44378295  T
Q  595 cttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
     ||| ||| |||||||||||||||||||||||||||||||||||| |||| |||  |||||||||| ||||||||||||    
T  44378294 tttgggttgaaaattaagctcgttaaataaatgagttgaacttgagctaagtataattcgactcgtctggttcatgaac 44378216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 9469917 - 9469745
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||| ||||| ||  |||||| |||| ||||| |   ||||||||| |||||||||| |||||| | ||||||    
T  9469917 tagggctgacaatgaaccgaaccaactcgaatatagttcgtaattcgactcgacaattggtctattgaacttggttcatgaaccaaatgagccaaacttg 9469818  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||| | |||||||| ||||||||||||| | ||||||||| ||||| |||||||||    
T  9469817 agctgaaaattaagttcgttgattaaatgagctgaacttgaactatagatggttcgattcgttaggttcatga 9469745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 19853118 - 19852946
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||| |||||||||||||  |||||  || |||||| |||||| || || ||||||||||| ||||||||||||| |||  | |||||    
T  19853118 tagggctgtcaatgaatcgaaccaactcgattatagtttgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagatggacttg 19853019  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  19853018 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 19852946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 21441721 - 21441549
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| || |||||||||||||||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||  | |||||    
T  21441721 tagggttgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 21441622  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  21441621 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 21441549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 50606148 - 50605976
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||| ||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||  | |||||    
T  50606148 tagggctggcaatgaaccgaaccaattcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 50606049  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||| ||||    
T  50606048 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggtttatga 50605976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 496 - 671
Target Start/End: Complemental strand, 36543924 - 36543749
Alignment:
Q  496 aaatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaac 595  Q
    ||||||||||| |||||||| ||||||||||||| ||||| ||  |||||| |||| ||||| | | ||||||||| |||||||||| ||| || | |||    
T  36543924 aaatagggctgacaatgaactgaaccaactcgaatatagttcgtaattcgactcgacaattggtccattgaacttggttcatgaaccaaataagccaaac 36543825  T
Q  596 ttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||| | ||||||||| ||||||| |||||||| ||||||||||||| | ||||||||| | ||| |||||||||    
T  36543824 ttgagctgaaaattaagttcgttaattaaatgagctgaacttgaactatagatggttcgatttgttaggttcatga 36543749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 499 - 653
Target Start/End: Original strand, 12789552 - 12789706
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| || |||||||||| |||  |||||||    
T  12789552 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggtttatgaacctaacgagctgaacttg 12789651  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttc 653  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| ||||    
T  12789652 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttc 12789706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 573 - 675
Target Start/End: Original strand, 50710844 - 50710946
Alignment:
Q  573 ttcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaa 672  Q
    |||||||| | ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||| |||||    
T  50710844 ttcatgaatcaaatgagtcgaaattgagttgaaaattaagctcgttaaataaataagttgaacttaaacttagtatggttcgactcgtttggtttatgaa 50710943  T
Q  673 cca 675  Q
    |||    
T  50710944 cca 50710946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 538 - 671
Target Start/End: Original strand, 43798262 - 43798395
Alignment:
Q  538 gagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaactt 637  Q
    |||| |||||||||||||| | |||||||||| | ||| |||||| |||||||||| |||||||  ||||| ||| || |||||||||||||||||||||    
T  43798262 gagactcgattcgataattaactcgttgaactcggttcttgaaccaaatgagtcgagcttgagtaaaaaatgaagatcattaaataaatgagttgaactt 43798361  T
Q  638 gaactaaatatggttcgactcgtttggttcatga 671  Q
    || |||  ||| ||||||||||||||||||||||    
T  43798362 gagctatgtatagttcgactcgtttggttcatga 43798395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 500 - 668
Target Start/End: Original strand, 19455159 - 19455327
Alignment:
Q  500 agggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttga 599  Q
    ||||||| ||||||||||| |  | ||||||||||| ||| | |||||| || |||| |||||||||||||| |||||||| | ||||||  ||||||||    
T  19455159 agggctgacaatgaaccgagcttattcgaaaatagttcgaaactcgatttgacaattaattcgttgaacttggttcatgaatcaaatgagctgaacttga 19455258  T
Q  600 gtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    ||| ||||||||| | ||||  |||||||||||||||||| ||| |||  |||||||| ||||||||||    
T  19455259 gttgaaaattaagtttgttatctaaatgagttgaacttgagctatatacagttcgacttgtttggttca 19455327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 22721467 - 22721296
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||| |||  ||||||||| | ||| ||  | |||||||| |||||  ||| ||||||||| |||||||||| || ||| | |||||     
T  22721467 tagggctggcaatgaatcgagacaactcgaataaagttcggaactcgattcggtaattagttcattgaacttggttcatgaaccaaacgaggcaaactta 22721368  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||||||||||||||||||||||  || |||| ||||||||||||||||||||||    
T  22721367 agct-aaaattaagttcgttaaataaatgagttgaacttgagttatatatagttcgactcgtttggttcatga 22721296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 26633076 - 26632904
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||| ||||||||||||||||||||||| |||||| ||  | ||||||||| |||| | ||||||||||||  |||| |||| ||||||  |||||||    
T  26633076 tagggccggcaatgaaccgaaccaactcgataatagttcgtaactcgattcgacaattaactcgttgaacttggctcattaaccaaatgagctgaacttg 26632977  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||||||||||||  ||||||||| || |||| || |||||   |||||||||||    
T  26632976 agctgaaaattaagttcgttaaataaatgagccgaacttgaattacatatagtccgacttagttggttcatga 26632904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 507 - 677
Target Start/End: Complemental strand, 39736815 - 39736645
Alignment:
Q  507 gcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaa 606  Q
    ||||| ||| ||| |||||||||||||||  |||| ||||||||||||||||||||||||| ||| |||| | ||| ||| |||||||||||| || |||    
T  39736815 gcaataaactgaatcaactcgaaaatagtttgagactcgattcgataattgattcgttgaatttggttcacggaccaaataagtcgaacttgaattaaaa 39736716  T
Q  607 attaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||||| | |||||||||| ||||| || |||| |||  |||| |||||||  |||  |||||||||||||    
T  39736715 attaagtttgttaaataaacgagttaaatttgagctatgtatgattcgacttatttaattcatgaaccagc 39736645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 499 - 669
Target Start/End: Complemental strand, 56224285 - 56224115
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||||| || ||||| ||| | | || || | |||| |||||||||||||| || || |||| |||||| ||||||||    
T  56224285 tagggctgacaatgaaccgaaccaactcaaacatagttcgaaacttgactcaacaattaattcgttgaacttggttaataaaccaaatgagccgaacttg 56224186  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    || | ||||||||  ||||||| ||||| |||||||||||||||| ||||  ||||| | |||||||||||    
T  56224185 agctgaaaattaaattcgttaattaaataagttgaacttgaactatatataattcgatttgtttggttcat 56224115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 48339099 - 48339268
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||| ||||||||||| |  | ||| ||  ||||||||||| || ||||| |||||||||| |||||||| | |||||||||||||||    
T  48339099 tagggctgacaatgaatcgaaccaactcaattagagttcgtaattcgattcgacaactgatttgttgaacttggttcatgaatcaaatgagtcgaacttg 48339198  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || | ||||||||| |||| || ||| |||| ||||||| | ||| || | |||||||||||||||||||    
T  48339199 agctgaaaattaagttcgtcaactaattgagctgaacttaagctatatgtagttcgactcgtttggttca 48339268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 512 - 671
Target Start/End: Original strand, 44791256 - 44791415
Alignment:
Q  512 gaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaa 611  Q
    |||||||||||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||  | ||||||  | ||||||||    
T  44791256 gaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctgcacttgaactgaaaattaa 44791355  T
Q  612 gctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    | ||||||| |||||||| |||| |||| ||| |||| |||||||||||| |||||||||    
T  44791356 gttcgttaattaaatgagctgaatttgagctacatatagttcgactcgttaggttcatga 44791415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 548 - 677
Target Start/End: Original strand, 25102646 - 25102775
Alignment:
Q  548 tcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaata 647  Q
    ||||||| ||||| ||||   ||| |||||||||| |||||| |||| ||||||| || ||||| || ||||||||||||||||||| || |||||| ||    
T  25102646 tcgataaatgatttgttgcgtttggttcatgaaccaaatgagccgaaattgagttgaacattaaacttgttaaataaatgagttgaatttaaactaagta 25102745  T
Q  648 tggttcgactcgtttggttcatgaaccagc 677  Q
    |||||| |||||||||||| ||||||||||    
T  25102746 tggttcaactcgtttggtttatgaaccagc 25102775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 50146918 - 50147087
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||| ||||||||||||||||| ||||  | ||| ||  ||||||||||| ||||||||||||||||||| |||||||||| |||||  || |||||    
T  50146918 tagggctagcaatgaaccgaaccaattcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgaaccggacttg 50147017  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || | ||||||||| |||| || ||| |||| ||||||| |  || || | ||||| |||||||||||||    
T  50147018 agctgaaaattaagttcgtgaactaattgagctgaacttaagttatatgtagttcggctcgtttggttca 50147087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 52813741 - 52813569
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| || ||||||||||||||||||||| ||||||  | || || ||| || |||| | |||||||||||| |||||||||| || |||  ||||||     
T  52813741 tagggttgacaatgaaccgaaccaactcgacaatagtttgggactctatttgacaattaactcgttgaacttggttcatgaaccaaacgagctgaactta 52813642  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| |||||||| ||||||| ||||||||| ||  |||| |||||| ||| |||||||||||    
T  52813641 agctgaaaattaagttcgttaaacaaatgagctgaacttgagctttatatagttcgattcggttggttcatga 52813569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 669
Target Start/End: Original strand, 48731173 - 48731343
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||| ||||| ||| |||||| |||| ||||| | | ||||| ||| |||||||||| ||| |   |||||||    
T  48731173 tagggctgccaatgaaccgaaccaactcgaatatagttcgaaattcgactcgacaattggtccattgaatttggttcatgaaccaaataaactgaacttg 48731272  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    || | ||||||||| ||||||| |||||||| || ||||||| || | || |||| | || ||||||||||    
T  48731273 agctaaaaattaagttcgttaattaaatgagctgtacttgaattatagatagttcaattcatttggttcat 48731343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 673
Target Start/End: Complemental strand, 52706357 - 52706183
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||  ||||||||| | | | ||  | | || ||| |||||  |||||| |||||| |||||||||| || ||| ||||||||    
T  52706357 tagggctggcaatgaaccgatacaactcgaataaaattcggaacttgactcggtaattagttcgttaaacttggttcatgaaccaaacgagccgaacttg 52706258  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    || | || |||||| ||||||| ||||||||||||||||||  || |||| |||||||||||||| |||| ||||    
T  52706257 agctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactcgtttgattcacgaac 52706183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 559 - 639
Target Start/End: Complemental strand, 7505609 - 7505529
Alignment:
Q  559 ttcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    |||||||||||||||||||||||| |||||| |||||||||| | ||||||||  ||||||| ||||||||||||||||||    
T  7505609 ttcgttgaacttgattcatgaaccaaatgagccgaacttgagctaaaaattaaattcgttaactaaatgagttgaacttga 7505529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 499 - 639
Target Start/End: Original strand, 9906356 - 9906496
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||  ||||||||  ||||||||  |||||| |||||  |||||  |||||||||||||||||||||    ||||| |||||||||    
T  9906356 tagggctgacaatgaactaaaccaacttaaaaatagtttgagatttgattcagtaattagttcgttgaacttgattcatgacttaaatgattcgaacttg 9906455  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    |||| |||||||| ||| ||| |||||| ||||||||||||    
T  9906456 agttgaaaattaaactcattatataaataagttgaacttga 9906496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 548 - 671
Target Start/End: Complemental strand, 49821073 - 49820950
Alignment:
Q  548 tcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaata 647  Q
    |||||| || || ||||||||||| ||||||||||||| |||  | |||| || | ||||||||| ||||||| |||||||| ||||||||| ||| |||    
T  49821073 tcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttaagctgaaaattaagttcgttaattaaatgagctgaacttgagctacata 49820974  T
Q  648 tggttcgactcgtttggttcatga 671  Q
    | |||||||||||| |||||||||    
T  49820973 tagttcgactcgttaggttcatga 49820950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 499 - 600
Target Start/End: Original strand, 4274556 - 4274657
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||| ||||||||||||||||||||||||||||| ||| | | ||||||| ||||   ||||||||| ||||||||||| | |||||| ||||||||    
T  4274556 tagggctagcaatgaaccgaaccaactcgaaaatagttcgaaacttgattcgacaattatctcgttgaacctgattcatgaaacaaatgagccgaacttg 4274655  T
Q  599 ag 600  Q
    ||    
T  4274656 ag 4274657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 502 - 671
Target Start/End: Complemental strand, 27891523 - 27891355
Alignment:
Q  502 ggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagt 601  Q
    ||||| ||||||| |||| |||||||| |||||| ||  | ||||||||| |||| | |||||||||||| |||||||| | ||||||  |||||||||     
T  27891523 ggctgacaatgaatcgaatcaactcgacaatagttcggaactcgattcgacaattaactcgttgaacttggttcatgaa-caaatgagctgaacttgagc 27891425  T
Q  602 ttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    | ||||| ||  | |||||||||||||| |||| ||||| |  |||| |||||||||| |||||||||||    
T  27891424 tgaaaatcaaatttgttaaataaatgagctgaatttgaattttatatagttcgactcggttggttcatga 27891355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 543 - 668
Target Start/End: Original strand, 43812101 - 43812226
Alignment:
Q  543 tcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaact 642  Q
    ||||||||| ||||||||||| ||||||| |||||||||| |||| | ||||||| |  | ||||||||| |||| || ||| |||| ||||||||||||    
T  43812101 tcgattcgacaattgattcgtcgaacttggttcatgaaccaaatgggccgaacttaaactgaaaattaagttcgtaaactaattgagctgaacttgaact 43812200  T
Q  643 aaatatggttcgactcgtttggttca 668  Q
    | || | ||||||||||||| |||||    
T  43812201 agatgtagttcgactcgtttagttca 43812226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 508 - 637
Target Start/End: Original strand, 52733710 - 52733838
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||||||| |||||||||  | |||| | ||| ||| |||||||||||| | |||||||| || ||||||||||| ||||||| ||| ||||| | ||||    
T  52733710 caatgaactgaaccaacttaataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctgaaaa 52733808  T
Q  608 ttaagctcgttaaataaatgagttgaactt 637  Q
    ||||| ||||||||||||| ||||||||||    
T  52733809 ttaagttcgttaaataaataagttgaactt 52733838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 639
Target Start/End: Original strand, 48151126 - 48151266
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||| |||||||  ||||||||||||| |||||| ||| | ||||||||| ||||   | |||||||||| ||||  |||| ||||||  |||||||    
T  48151126 tagggcttgcaatgattcgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggttcacaaaccaaatgagctgaacttg 48151225  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    || | ||||||||| ||||||||||||| ||| ||||||||    
T  48151226 agctgaaaattaagttcgttaaataaataagtcgaacttga 48151266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 497 - 639
Target Start/End: Original strand, 6866107 - 6866243
Alignment:
Q  497 aatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaact 596  Q
    ||||||| || |||||||||||||||||||||  | |||      || |||||||||||||||||||  |||||| |||||||||| |||||| ||||||    
T  6866107 aatagggttgacaatgaaccgaaccaactcgattaaagt------tttgattcgataattgattcgtcaaacttggttcatgaaccaaatgagccgaact 6866200  T
Q  597 tgagtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    |||| | ||||||||| |||| || ||| |||| |||||||||    
T  6866201 tgagctgaaaattaagttcgtcaactaattgagctgaacttga 6866243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 541 - 667
Target Start/End: Complemental strand, 24550176 - 24550049
Alignment:
Q  541 attcgattcgataattgattcgttgaacttgattc-atgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    |||||| ||| |||||||||||||||||||||||  || |||| | ||||| ||||||||| | ||||||||| | ||||| ||||||||||||||||||    
T  24550176 attcgactcggtaattgattcgttgaacttgattttataaaccaactgagttgaacttgagctaaaaattaagtttgttaactaaatgagttgaacttga 24550077  T
Q  640 actaaatatggttcgactcgtttggttc 667  Q
      ||  ||| | ||||||||||||||||    
T  24550076 gttatgtatagctcgactcgtttggttc 24550049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 503 - 597
Target Start/End: Original strand, 9874212 - 9874306
Alignment:
Q  503 gctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||| ||||||||||||||||||| |||||||| | |||||||||||  ||||| |||||||||| ||| | |||||||| |||||| |||||||    
T  9874212 gctgacaatgaaccgaaccaactcaaaaatagttcaagattcgattcagtaattaattcgttgaaattggtacatgaaccaaatgagccgaactt 9874306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 499 - 600
Target Start/End: Complemental strand, 38791831 - 38791731
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||||| ||||||  | || || |||||| |||| | |||||||||||| |||||||||| ||||||  |||||||    
T  38791831 tagggctggcaatgaaccgaaccaactcgacaatagtttg-gaatcaattcgacaattaactcgttgaacttggttcatgaaccaaatgagctgaacttg 38791733  T
Q  599 ag 600  Q
    ||    
T  38791732 ag 38791731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 671
Target Start/End: Complemental strand, 53369733 - 53369656
Alignment:
Q  594 acttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||||| | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  53369733 acttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 53369656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 508 - 668
Target Start/End: Original strand, 32397707 - 32397867
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||| ||||||||||| ||||  | ||| ||  |||||| |||| ||||||||||  ||||||| |||||||| | ||| || |||||||||  | ||||    
T  32397707 caataaaccgaaccaattcgattaaagttcgtaattcgactcgacaattgattcgccgaacttggttcatgaatcaaataagccgaacttgaactaaaaa 32397806  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    ||||| |||| || ||| |||| ||||||||||||| || | | |||||||||||| ||||    
T  32397807 ttaagttcgtcaactaattgagctgaacttgaactatatgtagctcgactcgtttgattca 32397867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 508 - 591
Target Start/End: Complemental strand, 28470949 - 28470867
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtc 591  Q
    ||||||||  |||||||||||||| ||| ||| | |||||||| ||||| |||||||||||||| |||||||||| ||||||||    
T  28470949 caatgaactaaaccaactcgaaaaaagtacga-actcgattcggtaattaattcgttgaacttggttcatgaaccaaatgagtc 28470867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 497 - 596
Target Start/End: Original strand, 36643983 - 36644081
Alignment:
Q  497 aatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaact 596  Q
    |||||||||| |||| |||||||||||||| |||||||| ||||| || ||| ||||||| | || ||||||||  |||||||||| ||||||| |||||    
T  36643983 aatagggctgacaatcaaccgaaccaactccaaaatagttcgagactc-atttgataattaactcattgaactttgttcatgaaccaaatgagttgaact 36644081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 508 - 639
Target Start/End: Original strand, 49083243 - 49083374
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    ||||||| |||||||||| || ||||||  || ||| || |||||||||  |  |||||||||| ||||| |||||||||||| ||||||||  | ||||    
T  49083243 caatgaatcgaaccaacttgagaatagtttgaaattggactcgataattagtctgttgaacttggttcataaacctaatgagttgaacttgatctgaaaa 49083342  T
Q  608 ttaagctcgttaaataaatgagttgaacttga 639  Q
    ||||  ||||||| |||||||| || ||||||    
T  49083343 ttaaattcgttaattaaatgagctgtacttga 49083374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 589
Target Start/End: Complemental strand, 9959471 - 9959382
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgag 589  Q
    |||||||| ||||||||||||||||||||| |||||| ||| | ||||||| |||| | | |||||||||||| |||||||| | ||||||    
T  9959471 tagggctgacaatgaaccgaaccaactcgacaatagttcgaaactcgattctataaataactcgttgaacttg-ttcatgaatcaaatgag 9959382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 499 - 582
Target Start/End: Complemental strand, 43387397 - 43387314
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacc 582  Q
    |||||||||||||||||||||||||||||| ||||||    || | ||||||| |||| | |||||||| ||| ||||||||||    
T  43387397 tagggctggcaatgaaccgaaccaactcgacaatagtttaggacttgattcgacaattaactcgttgaatttggttcatgaacc 43387314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 671
Target Start/End: Original strand, 16742423 - 16742497
Alignment:
Q  597 tgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||| ||||||||| |||||||||||||||| |||||||||  |  |||| |||||| ||| |||||||||||    
T  16742423 tgagttgaaaattaagttcgttaaataaatgagctgaacttgagttgtatatagttcgattcgattggttcatga 16742497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 499 - 557
Target Start/End: Original strand, 50710784 - 50710842
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattg 557  Q
    |||||||| |||||||||||| ||||||||||||||| ||| | |||||| ||||||||    
T  50710784 tagggctgacaatgaaccgaatcaactcgaaaatagttcgatactcgatttgataattg 50710842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 625
Target Start/End: Complemental strand, 50137480 - 50137407
Alignment:
Q  552 taattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaa 625  Q
    ||||| |||||||||  ||| || |||||||  |||||||||||||||| | |||||||| |||||||||||||    
T  50137480 taattaattcgttgattttggtttatgaaccagatgagtcgaacttgaggtgaaaattaaactcgttaaataaa 50137407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 615 - 671
Target Start/End: Complemental strand, 43387292 - 43387236
Alignment:
Q  615 cgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||||| ||||||| ||||||||||||  |||| |||||||||| |||||||||||    
T  43387292 cgttaaacaaatgagctgaacttgaactttatatagttcgactcggttggttcatga 43387236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 669
Target Start/End: Original strand, 38493082 - 38493147
Alignment:
Q  604 aaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    ||||||||| | ||||| ||||||||||||||||||  || ||||  || ||||||||||||||||    
T  38493082 aaaattaagtttgttaattaaatgagttgaacttgagttatatataatttgactcgtttggttcat 38493147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 2e-72; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 499 - 677
Target Start/End: Complemental strand, 12710842 - 12710664
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  12710842 tagggctggcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttg 12710743  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||||||||||||||||||||| ||||||||  | | ||||||||||||||||||||||||||||||||    
T  12710742 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatggttcgactcgtttggttcatgaaccagc 12710664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 499 - 677
Target Start/End: Complemental strand, 40943701 - 40943523
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||| ||||||||||||||||||||||| ||| | |||||| |||||||| ||| ||| ||||| |||||||||| |||||||||||||||    
T  40943701 tagggctggcaataaaccgaaccaactcgaaaatagttcgatactcgatttgataattggttcattggacttggttcatgaaccaaatgagtcgaacttg 40943602  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  40943601 agttgaaaattaagctcgttaaataaatgagttgaacttgaacttagtatggttcgactcgtttggttcatgaaccagc 40943523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 30662131 - 30662309
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||| | |||||||||||||||    
T  30662131 tagggctgacaatgagccgaaccaactcgaaaatagtttgagattcgattcgataattgactcgttgaacttggttcatgaatcaaatgagtcgaacttg 30662230  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||||||||||||||||||||| ||||||||  | | ||| ||||||||||||||||||||||||||||    
T  30662231 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatagttcgactcgtttggttcatgaaccagc 30662309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 20550202 - 20550380
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||| ||| ||||||||| |||||||||||||||||| ||| | |||||||||||||||||| |||||||||| |||| ||||| |||||||||||| ||    
T  20550202 taggcctgtcaatgaaccaaaccaactcgaaaatagttcgatactcgattcgataattgatttgttgaacttggttcacgaaccaaatgagtcgaacatg 20550301  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||  ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  20550302 agttgaaaattaaattcgttaaataaatgagttgtacttgaactaagtatggttcgactcgtttgattcatgaaccagc 20550380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 500 - 671
Target Start/End: Original strand, 26049541 - 26049712
Alignment:
Q  500 agggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttga 599  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   |||||||||| |||||||| | ||||||||||||||||    
T  26049541 agggctggcaatgaaccgaaccaactcgaaaatagtttgagattcgattcgataattgacctgttgaacttggttcatgaatcaaatgagtcgaacttga 26049640  T
Q  600 gtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||| ||||||||||||||||||||||| ||| ||||||||  | | |||| ||||| ||||| |||||||||    
T  26049641 gttgaaaattaagctcgttaaataaattagtcgaacttgagttgagtatgattcgattcgttaggttcatga 26049712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 496 - 677
Target Start/End: Original strand, 54432174 - 54432369
Alignment:
Q  496 aaatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcat--------------gaac 581  Q
    |||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||| ||| ||||| |||||              ||||    
T  54432174 aaatagggctggcaatgaaccgaaccaactcgaaaatagttcgatactcgattcgataattggttcattggacttggttcattggacttggttcatgaac 54432273  T
Q  582 ctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
      ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||    
T  54432274 taaatgagtcgaacttgagttaaaaattaagctcgttaaataaatgagttgaacttgaacttagtacggttcgactcgtttggttcatgaaccagc 54432369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 54393443 - 54393612
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  | ||| ||  ||||||||||| ||||||||||||||||||| ||||| |||| |||||| ||||||||    
T  54393443 tagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcataaaccaaatgagccgaacttg 54393542  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || | ||||||||| |||| |||||| ||||  |||||||||||| || | |||||||||||||||||||    
T  54393543 agctgaaaattaagttcgtcaaataattgagccgaacttgaactatatgtagttcgactcgtttggttca 54393612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 9505121 - 9505293
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||||| |||||| ||  | ||||||||| |||| | |||||||||||| |||||||||| ||||||| |||||||    
T  9505121 tagggctggcaatgaaccgaaccaactcgacaatagttcggaactcgattcgacaattaactcgttgaacttggttcatgaaccaaatgagttgaacttg 9505220  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| |||||||||||||||| |||||||||  || |||| |||||  ||| |||||||||||    
T  9505221 agctgaaaattaagttcgttaaataaatgagctgaacttgagatatatatagttcggttcggttggttcatga 9505293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 496 - 671
Target Start/End: Complemental strand, 39135497 - 39135322
Alignment:
Q  496 aaatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaac 595  Q
    |||||||||||||||| ||||||||||||||||| ||||| |   |||||| |||| ||||| ||| ||||||||| |||||||||| |||||| |||||    
T  39135497 aaatagggctggcaataaaccgaaccaactcgaatatagttcataattcgactcgacaattggttcattgaacttggttcatgaaccaaatgagccgaac 39135398  T
Q  596 ttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||| | ||||||||| ||||||| |||||||| ||||||| ||||| | ||||||||| ||||| |||||||||    
T  39135397 ttgagctgaaaattaagttcgttaattaaatgagctgaacttaaactatagatggttcgattcgttaggttcatga 39135322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 33438731 - 33438900
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||  | |||  |  ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  33438731 tagggctgacaatgaaccgaaccaactcgattaaagtttgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgagtcgaacttg 33438830  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || | ||||||||| |||| || ||| |||| | || |||||||| || | |||||||| ||||||||||    
T  33438831 agctgaaaattaagttcgtcaactaattgagctaaagttgaactatatgtagttcgacttgtttggttca 33438900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 32689309 - 32689137
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||  | |||||    
T  32689309 tagggctgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 32689210  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| ||||||||||||  ||||||||    
T  32689209 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaagttcatga 32689137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 52934952 - 52934780
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||| |||||||||||| ||||||||| || |||||| ||  | |||||||||||||| | || ||||||||| |||||||||| ||||||  |||||||    
T  52934952 taggtctggcaatgaactgaaccaacttgacaatagttcggaactcgattcgataattaactcattgaacttggttcatgaaccaaatgagctgaacttg 52934853  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||   ||||||||| ||||||||||||||||  |||||||| ||| |||| |||||||||| |||||||||||    
T  52934852 agcagaaaattaagttcgttaaataaatgagccgaacttgatctatatatagttcgactcgattggttcatga 52934780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 520 - 675
Target Start/End: Original strand, 15822370 - 15822525
Alignment:
Q  520 ccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgtta 619  Q
    |||| ||||||||||| ||| |||||||||| |||||| ||||||||||||| ||||||| || | ||||| ||||||||||| |||||||||||||| |    
T  15822370 ccaattcgaaaatagttcgaaattcgattcggtaattgtttcgttgaacttggttcatgatccaattgagtagaacttgagttgaaaattaagctcgtca 15822469  T
Q  620 aataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
    ||||||||||  ||||||||| ||  |||  || |||||||||| |||||||||||    
T  15822470 aataaatgagccgaacttgaattacgtataattagactcgtttgattcatgaacca 15822525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 505 - 671
Target Start/End: Complemental strand, 41610021 - 41609856
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    |||||||||||||| |||||||||  ||||| ||| |||||| |||||| || || ||||||||||| ||||||||||||| |||  | ||||||| | |    
T  41610021 tggcaatgaaccga-ccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctga 41609923  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  41609922 aaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttgggttcatga 41609856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 518 - 672
Target Start/End: Original strand, 48730856 - 48731010
Alignment:
Q  518 aaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgt 617  Q
    |||||||||||||||||| |||||||||||| | ||||| ||||||| ||||||||||||||||| ||| |||| ||||| |||  |||||||| ||||     
T  48730856 aaccaactcgaaaatagttcgagattcgatttgctaattaattcgttaaacttgattcatgaaccaaataagtcaaacttaagtgcaaaattaaactcga 48730955  T
Q  618 taaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaa 672  Q
    |||||||||||||||||| | || ||| ||| |||||| ||||||  ||||||||    
T  48730956 taaataaatgagttgaacataaattaagtatagttcgattcgtttaattcatgaa 48731010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 39469531 - 39469703
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||  ||||||| ||||||||||||| ||||| ||  ||||||||||||||||| | | ||||||||| |||||||| | |||||| ||||||||    
T  39469531 tagggctgataatgaactgaaccaactcgaatatagttcgtaattcgattcgataattggtccattgaacttggttcatgaatcaaatgagccgaacttg 39469630  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| | |||||||| || | || |||||| ||||| |||||||||    
T  39469631 agctgaaaattaagttcgttaattaaatgagctaaacttgaattatagattgttcgattcgttaggttcatga 39469703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 46293213 - 46293385
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||| ||||||||| ||||| | | |||||| | || ||||| |   ||||| ||| |||||||||| |||||| ||||||||    
T  46293213 tagggctgacaatgaaccgaatcaactcgaatatagttcaaaattcgacttgacaattggtcaattgaatttggttcatgaaccaaatgagccgaacttg 46293312  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||||||||||| ||||| | || |||||| |||||||||||||||    
T  46293313 agctgaaaattaagttcgttaattaaatgagttgaacttaaactataaatagttcgattcgtttggttcatga 46293385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 505 - 671
Target Start/End: Original strand, 39942806 - 39942972
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    ||||||||||| ||||||||||||  ||||| ||| ||||||||||  |||| ||  |||||||||| ||||||||| |||||||  ||||||||| | |    
T  39942806 tggcaatgaactgaaccaactcgagtatagttcgaaattcgattcggcaattaatctgttgaacttggttcatgaacttaatgagctgaacttgagctga 39942905  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||||| |||||||||| ||||| |||||||||  || | |||| ||||||||||||||| ||||    
T  39942906 aaattaagttcgttaaatagatgagctgaacttgagttatagatggctcgactcgtttggtttatga 39942972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 44574666 - 44574494
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||  ||||||||| ||||| |||   |||| |||  |||| |||||||||||||  ||| |||||||||||||  |||||||    
T  44574666 tagggctggcaatgaaccgagacaactcgaatatagttcgaagctcgactcggcaattaattcgttgaacttagttcgtgaacctaatgagctgaacttg 44574567  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||| ||||| ||| ||||| | ||||||||  |||||||| ||| |||| ||||| ||||||||||||||||    
T  44574566 agttaaaaatcaagttcgtttattaaatgagccgaacttgagctacatatagttcggctcgtttggttcatga 44574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 639
Target Start/End: Complemental strand, 52199569 - 52199429
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||| ||||||||||||| ||||||  | || ||||||||| |||| |||||||||||||| |||||||||| || |||  |||||||    
T  52199569 tagggctgacaatgaatcgaaccaactcgacaatagtttgggactcgattcgacaattaattcgttgaacttggttcatgaaccaaacgagctgaacttg 52199470  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    || | ||||||||| |||||||| ||||||| |||||||||    
T  52199469 agctgaaaattaagttcgttaaacaaatgagctgaacttga 52199429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 672
Target Start/End: Original strand, 19560774 - 19560947
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||| ||||| ||  |||||| |||| |||| |||||||||||||| |||||||||  ||  ||  |||||||    
T  19560774 tagggctggcaatgaaccgaaccaactcgaatatagttcggaattcgactcgacaattaattcgttgaacttggttcatgaacgaaacaagctgaacttg 19560873  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaa 672  Q
    |||| | | |||||  |||||||||||||||  ||||||||  || |||| ||| |||||| || |||||||||    
T  19560874 agttaagagttaagtccgttaaataaatgagccgaacttgagttatatatagtttgactcgatttgttcatgaa 19560947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 503 - 671
Target Start/End: Complemental strand, 26136469 - 26136301
Alignment:
Q  503 gctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtt 602  Q
    |||| ||||||||| |||||||| || ||||||  |||| |||||||| |||||  || |||||||||| || ||||||  | |||| ||||||||||||    
T  26136469 gctgacaatgaacccaaccaacttgataatagtttgagactcgattcgttaattagtttgttgaacttggtttatgaactaagtgagccgaacttgagtt 26136370  T
Q  603 taaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
     ||||||| | | |||||| ||||||||||||| | ||||| |||| ||| ||||||||||||||||||    
T  26136369 caaaattatgtttgttaaacaaatgagttgaacataaactacatatagtttgactcgtttggttcatga 26136301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 25253842 - 25253670
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||| |||||  |  | |||| |||| |||  | | |||||||||| |||||||||| ||||||  |||||||    
T  25253842 tagggctggcaatgaaccgaaccaactcgaatatagtttggaactcgactcgacaataaacttgttgaacttggttcatgaaccaaatgagctgaacttg 25253743  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||||||||||||  |||||| | ||| || |   |||||||| |||||||||||    
T  25253742 agctaaaaattaagttcgttaaataaatgagccgaacttaagctatatgtaactcgactcgattggttcatga 25253670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 681
Target Start/End: Complemental strand, 49026641 - 49026577
Alignment:
Q  617 ttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 681  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49026641 ttaaataaacgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccaacccga 49026577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 505 - 671
Target Start/End: Complemental strand, 28242717 - 28242551
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    ||||||||||||||| |||||||| |||| | ||  | | ||||||| |||| | |||||||| ||| |||||||||| ||||||  ||| ||||| | |    
T  28242717 tggcaatgaaccgaatcaactcgacaataattcggaacttgattcgacaattaactcgttgaatttggttcatgaaccaaatgagctgaatttgagctga 28242618  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||||  |||||||||||||||  ||||||||| ||  |||| |||||||||| |||||||||||    
T  28242617 aaattaaattcgttaaataaatgatctgaacttgagctgtatatagttcgactcggttggttcatga 28242551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 503 - 600
Target Start/End: Complemental strand, 45714832 - 45714735
Alignment:
Q  503 gctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgag 600  Q
    ||||||||||||| ||||||||||||  | ||| ||  ||||||||||| ||||||||||||||||||||||||| || | |||||||||||||||||    
T  45714832 gctggcaatgaactgaaccaactcgattaaagttcgttattcgattcgacaattgattcgttgaacttgattcataaatcaaatgagtcgaacttgag 45714735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 562 - 673
Target Start/End: Complemental strand, 5418755 - 5418644
Alignment:
Q  562 gttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtt 661  Q
    |||||||||  |||||||||| || |||||||||||||| | || |||||| ||||||| ||||||||||||||||||  || |||| ||||||||| ||    
T  5418755 gttgaacttagttcatgaaccaaacgagtcgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactcatt 5418656  T
Q  662 tggttcatgaac 673  Q
    ||||||| ||||    
T  5418655 tggttcacgaac 5418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 501 - 671
Target Start/End: Original strand, 23206310 - 23206479
Alignment:
Q  501 gggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgag 600  Q
    ||||||||||||||||||||||||||||  ||||| ||| |||||| | |||| || ||  |||||||||  ||||||||||||| |||  | |||||||    
T  23206310 gggctggcaatgaaccgaaccaactcgattatagttcgacattcgacttgatatttaatctgttgaactttgttcatgaacctaacgagctggacttgag 23206409  T
Q  601 tttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
     | ||||||||| || |||| |||||||| ||||||| | ||| |||| ||||||||  || |||||||||    
T  23206410 ctgaaaattaagttc-ttaattaaatgagctgaacttaagctacatatagttcgacttattaggttcatga 23206479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 559 - 671
Target Start/End: Complemental strand, 50965484 - 50965371
Alignment:
Q  559 ttcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa-ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgact 657  Q
    |||||| || ||| |||||||||||||||||  ||| ||||| | |||| ||||| |||||||||||||||| ||||||||| ||| |||||||||||||    
T  50965484 ttcgttaaatttggttcatgaacctaatgagctgaatttgagctgaaaaattaagttcgttaaataaatgagctgaacttgagctatatatggttcgact 50965385  T
Q  658 cgtttggttcatga 671  Q
    || |||| ||||||    
T  50965384 cgattggctcatga 50965371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 559 - 671
Target Start/End: Complemental strand, 51068619 - 51068506
Alignment:
Q  559 ttcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa-ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgact 657  Q
    |||||| || ||| |||||||||||||||||  ||| ||||| | |||| ||||| |||||||||||||||| ||||||||| ||| |||||||||||||    
T  51068619 ttcgttaaatttggttcatgaacctaatgagctgaatttgagctgaaaaattaagttcgttaaataaatgagctgaacttgagctatatatggttcgact 51068520  T
Q  658 cgtttggttcatga 671  Q
    || |||| ||||||    
T  51068519 cgattggctcatga 51068506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 514 - 639
Target Start/End: Complemental strand, 31589747 - 31589622
Alignment:
Q  514 accgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagc 613  Q
    ||||||||||||| |||||| | | | ||| |||||| ||||  |||| ||| ||||| ||||| |||| ||| |||| |||||||||| |||||||||     
T  31589747 accgaaccaactccaaaataattcaaaatttgattcggtaatcaattcattggacttggttcataaaccaaataagtcaaacttgagttgaaaattaagt 31589648  T
Q  614 tcgttaaataaatgagttgaacttga 639  Q
    | |||||||||| | |||||||||||    
T  31589647 ttgttaaataaacgggttgaacttga 31589622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 618
Target Start/End: Complemental strand, 30743713 - 30743593
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||||||||| ||||||||||||||||||||| ||||| ||    |||| ||||  ||  | |||||||||||| |||||||||| ||||||  ||| ||    
T  30743713 atagggctggaaatgaaccgaaccaactcgaatatagttcggagctcgactcgaagatgaactcgttgaacttggttcatgaaccaaatgagctgaattt 30743614  T
Q  598 gagtttaaaattaagctcgtt 618  Q
    ||||| | ||||||| |||||    
T  30743613 gagttgagaattaagttcgtt 30743593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 592 - 668
Target Start/End: Original strand, 53529683 - 53529759
Alignment:
Q  592 gaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    ||||||||| | ||||||||| |||| || ||| |||| ||||||||||||| || | |||||||||||||||||||    
T  53529683 gaacttgagctgaaaattaagttcgtcaactaattgagctgaacttgaactatatgttgttcgactcgtttggttca 53529759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 592 - 671
Target Start/End: Complemental strand, 52199436 - 52199357
Alignment:
Q  592 gaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||||||| | ||||||||| |||||||| ||||||| ||||||||| ||  |||| |||||||||  |||||||||||    
T  52199436 gaacttgagctgaaaattaagttcgttaaacaaatgagctgaacttgagctttatatagttcgactcagttggttcatga 52199357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 509 - 639
Target Start/End: Complemental strand, 1674759 - 1674629
Alignment:
Q  509 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaat 608  Q
    |||||||||||||||||||| |||||| |   ||||||||| | ||||   | |||||||||| |||||||||| ||||||| |||||| || | |||||    
T  1674759 aatgaaccgaaccaactcgacaatagttcagaattcgattcaacaattatcttgttgaacttggttcatgaaccaaatgagttgaacttaagctgaaaat 1674660  T
Q  609 taagctcgttaaataaatgagttgaacttga 639  Q
    |  |   ||||||||||| || |||||||||    
T  1674659 tttgtatgttaaataaataagctgaacttga 1674629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 593 - 638
Target Start/End: Complemental strand, 29536643 - 29536598
Alignment:
Q  593 aacttgagtttaaaattaagctcgttaaataaatgagttgaacttg 638  Q
    |||||||||| |||||||| |||||||||||||| |||||||||||    
T  29536643 aacttgagttgaaaattaaactcgttaaataaataagttgaacttg 29536598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 572 - 671
Target Start/End: Complemental strand, 28701064 - 28700965
Alignment:
Q  572 attcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||||||||| ||| ||| ||| ||||  | ||||||||  |||||||| |||||||||||||||||  || || | |||||||||| ||| |||||||    
T  28701064 attcatgaaccaaataagttgaagttgaactgaaaattaaattcgttaaaaaaatgagttgaacttgagttatatctagttcgactcggttgattcatga 28700965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 9e-72; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 500 - 677
Target Start/End: Original strand, 18249994 - 18250171
Alignment:
Q  500 agggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttga 599  Q
    |||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  18249994 agggctggcaatgaaccgaaccaactcgaaaatagttcaagactcgattcgataattgattcgttgaacttggttcatgaaccaaatgagtcgaacttga 18250093  T
Q  600 gtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  18250094 gttgaaaattatgctcgttaaataaatgagttgaacttgaactaagtatgattcgactcgtctggttcatgaaccagc 18250171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 46573612 - 46573790
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||     
T  46573612 tagggctggcaatgaaccgaaccaactcaaaaataattcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaactta 46573711  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||||||||||||||||||||| ||||||||  | | ||||||||||||||||||||||||||||||||    
T  46573712 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatggttcgactcgtttggttcatgaaccagc 46573790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 17025361 - 17025539
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||||||||| | || ||||||||||||||||| |||||||||||| |||| ||||| |||||||||||||||    
T  17025361 tagggctgacaatgaaccgaaccaactcgaaaatagttcaaggttcgattcgataattgactcgttgaacttggttcacgaaccaaatgagtcgaacttg 17025460  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||||||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||||||||||||    
T  17025461 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatggttcgactcgttttgttcatgaaccagc 17025539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 18740218 - 18740396
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||| || || |||||| |||||||||| |||||||||||||||    
T  18740218 tagggccggcaatgaaccgaaccaactcgaaaatagttcgagattcgatttgataattgactcattaaacttggttcatgaaccaaatgagtcgaacttg 18740317  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||||||||||||||||||||| ||||||||  | | ||||||||||||||||| ||||||||||||||    
T  18740318 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatggttcgactcgtttagttcatgaaccagc 18740396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 33898944 - 33899122
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||||||||||| ||||  ||| ||| ||||| |||||||||| |||||||||||||||    
T  33898944 tagggctgacaatgaaccgaaccaactcgaaaatagttcgatattcgattcgagaattagttcattggacttggttcatgaaccaaatgagtcgaacttg 33899043  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| |||||||||||||||||||||||||||||||||| || | | ||||||||||||||||||||||||||||||||    
T  33899044 agttgaaaattaagctcgttaaataaatgagttgaacttaaatttagtatggttcgactcgtttggttcatgaaccagc 33899122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 499 - 677
Target Start/End: Complemental strand, 26719960 - 26719782
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||| ||| ||||||| |||||||||||||||||||| ||| | ||||||||||||||| ||| ||| ||||| |||||||||| |||||||||||||||    
T  26719960 taggactgacaatgaatcgaaccaactcgaaaatagttcgatactcgattcgataattggttcattggacttggttcatgaaccaaatgagtcgaacttg 26719861  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||    
T  26719860 agttgaaaattaagttcgttaaataaatgagttgaacttgaacttagtatggttcgactcgtttgattcatgaaccagc 26719782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 35543556 - 35543731
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||| ||||||||||||||||||||  |||| || |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  35543556 tagggctgacaatgaatcgaaccaactcgaaaatagtttgagactccattcgataattgattcgttgaacttggttcatgaactaaatgagtcgaacttg 35543655  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| |||||||||||||   ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  35543656 agttgaaaattaagctcg---aataaatgagttgaacttgaactaagtatgattcgactcgtctggttcatgaaccagc 35543731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 497 - 673
Target Start/End: Complemental strand, 36472586 - 36472410
Alignment:
Q  497 aatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaact 596  Q
    |||||||||| ||||||||||||||||||||||||||    || | |||||||||||| |||||||||||||||| |||||||||| |||||| ||||||    
T  36472586 aatagggctgacaatgaaccgaaccaactcgaaaataacttgatactcgattcgataaatgattcgttgaacttggttcatgaaccaaatgagccgaact 36472487  T
Q  597 tgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||  |  |||||||||||||||||||||||||||    
T  36472486 tgagttgaaaattaagctcgttaaataaataagttgaacttgaaccgagcatggttcgactcgtttggttcatgaac 36472410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 49034224 - 49034400
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||| ||||||| |||||||||||||||| ||| |||||||||| |||||| ||||||||||||| |||||||||| |||||||||||||||    
T  49034224 tagggctggcaacgaaccgatccaactcgaaaatagttcgaaattcgattcggtaattgtttcgttgaacttggttcatgaaccaaatgagtcgaacttg 49034323  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
    |||| |||||||||||||| |||||||||||| |||||||||||| ||||  |||||||| |||| || ||||||||    
T  49034324 agttgaaaattaagctcgtcaaataaatgagtcgaacttgaactacatataattcgactcatttgatttatgaacca 49034400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 499 - 677
Target Start/End: Original strand, 21760583 - 21760761
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||  ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||  |||| ||||| |||||||||||||||    
T  21760583 tagggctgataatgaaccgaaccaactcgaaaatagttcgaaactcgattcgataattgattcgttgaactttgttcacgaaccaaatgagtcgaacttg 21760682  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| |||| ||| ||||||||||||||||||||||||||| ||   |||||||||||||||| | |||||||||||||    
T  21760683 agttgaaaactaaactcgttaaataaatgagttgaacttgagcttcgtatggttcgactcgttagattcatgaaccagc 21760761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 497 - 677
Target Start/End: Complemental strand, 33019448 - 33019269
Alignment:
Q  497 aatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaact 596  Q
    |||| ||||| ||||||||||||||||||| |||||||| ||| | ||||||||||||||| ||||||||||||| |||| ||| | ||| |||||||||    
T  33019448 aatatggctgacaatgaaccgaaccaactcaaaaatagttcgatactcgattcgataattggttcgttgaacttggttcacgaatcaaataagtcgaact 33019349  T
Q  597 tgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||||| |||||||| |||||||||| ||| ||||||| ||||||| | ||| |||||||| |||||||||||||||||||    
T  33019348 tgagttgaaaattaaactcgttaaat-aataagttgaatttgaacttactatagttcgacttgtttggttcatgaaccagc 33019269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 498 - 671
Target Start/End: Complemental strand, 7448022 - 7447849
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||||||| |||||||||||||||||||||| ||||| |   |||||| |||| ||||| ||| ||||||||| |||||||||| |||||| |||||||    
T  7448022 atagggctgacaatgaaccgaaccaactcgaatatagttcataattcgactcgacaattggttcattgaacttggttcatgaaccaaatgagccgaactt 7447923  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||| | ||||||||| ||||||| |||||||||||||||||||||| | ||||||||| ||||| |||||||||    
T  7447922 gagctgaaaattaagttcgttaattaaatgagttgaacttgaactatagatggttcgattcgttaggttcatga 7447849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 499 - 677
Target Start/End: Complemental strand, 32357106 - 32356928
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||| ||||||||  |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||  |||||| |||| |||    
T  32357106 tagggctgacaatgaaccaaaccaacttaaaaatagttcgagactcgattcgataattaattcgttgaacttgattcatgaactaaatgagccgaatttg 32357007  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||| ||||| ||| ||||||| |||| ||||||||||| |||||  |||   ||||||| ||||||||||||||||||    
T  32357006 agttgaaaataaagttcgttaagtaaacgagttgaacttaaactatgtataactcgactcatttggttcatgaaccagc 32356928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 500 - 671
Target Start/End: Complemental strand, 36927143 - 36926972
Alignment:
Q  500 agggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttga 599  Q
    |||||||||||||||||||||||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||| | ||||||    
T  36927143 agggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagttggacttga 36927044  T
Q  600 gtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    | | ||||||||| ||||||| |||||||||||||||||| ||| |||| |||||||||||| || ||||||    
T  36927043 gctaaaaattaagttcgttaattaaatgagttgaacttgagctacatatagttcgactcgttaggctcatga 36926972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 5776130 - 5776302
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| ||||||||||||||||||||||||  ||||| ||| |||||| |||||| || || ||||||||||| ||||||||||||| |||  | |||||    
T  5776130 tagggttggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 5776229  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  5776230 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttcggttcatga 5776302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 547 - 677
Target Start/End: Complemental strand, 30919519 - 30919389
Alignment:
Q  547 ttcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaat 646  Q
    ||||||||||||||||||||||||| || | ||||| ||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||| ||   |    
T  30919519 ttcgataattgattcgttgaacttggtttacgaaccaaatgagtcgaacttgagttgaaaactaaactcgttagataaatgagttgaacttgagcttcgt 30919420  T
Q  647 atggttcgactcgtttggttcatgaaccagc 677  Q
    ||||||||||||||| |||||||||||||||    
T  30919419 atggttcgactcgttaggttcatgaaccagc 30919389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 498 - 671
Target Start/End: Complemental strand, 37334424 - 37334251
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||||| || |||||||||||||||||||||  ||||| ||| ||||||||||||| || || ||||||||||| ||||||||||||| |||  | ||||    
T  37334424 atagggttgacaatgaaccgaaccaactcgattatagttcgacattcgattcgatatttaatccgttgaacttggttcatgaacctaacgagctggactt 37334325  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||| | ||||||||| ||||||| |||||||| ||||||||| ||| |||| ||||||||| || |||||||||    
T  37334324 gagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcattaggttcatga 37334251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 503 - 643
Target Start/End: Complemental strand, 31491956 - 31491816
Alignment:
Q  503 gctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtt 602  Q
    |||| |||||||||||| |||||| ||||||||  ||||||||||||||||||| |||||||||||||||  |||||||| |||||||||||||| |  |    
T  31491956 gctgacaatgaaccgaatcaactcaaaaatagtttgagattcgattcgataattaattcgttgaacttgacacatgaaccaaatgagtcgaacttaaact 31491857  T
Q  603 taaaattaagctcgttaaataaatgagttgaacttgaacta 643  Q
     || |||||| ||||||||||||| ||||||||||||||||    
T  31491856 caatattaagttcgttaaataaattagttgaacttgaacta 31491816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 513 - 671
Target Start/End: Original strand, 29037794 - 29037952
Alignment:
Q  513 aaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaag 612  Q
    ||||| |||| ||||||||||||  |||| |||||||| ||||| ||| | |||||||  |||||||||| |||||| |||||||||||| |||||||||    
T  29037794 aaccgtaccagctcgaaaatagtttgagactcgattcggtaattaatttgctgaactttgttcatgaaccaaatgagacgaacttgagttgaaaattaag 29037893  T
Q  613 ctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
      ||||||| |||||||||||| || ||||| ||||||||||||||||||| |||||||    
T  29037894 tccgttaaacaaatgagttgaatttaaactatatatggttcgactcgtttgattcatga 29037952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 496 - 669
Target Start/End: Complemental strand, 22075211 - 22075038
Alignment:
Q  496 aaatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaac 595  Q
    ||||||||||||||||||||||||||||||||| ||||||     | ||||||||| |||| | ||||||||| || |||| ||||| ||||||  ||||    
T  22075211 aaatagggctggcaatgaaccgaaccaactcgataatagtttagaactcgattcgacaattaactcgttgaacgtggttcacgaaccaaatgagctgaac 22075112  T
Q  596 ttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    ||||| | ||||||||| |||||||||||||||| ||||||||| ||  |||| |||||||||| |||||||||    
T  22075111 ttgagctgaaaattaagttcgttaaataaatgagctgaacttgatctgtatatagttcgactcgattggttcat 22075038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 499 - 672
Target Start/End: Original strand, 28949758 - 28949931
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||| ||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||  | | |||    
T  28949758 tagggctggcaatgaaccgaatcaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggaattg 28949857  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaa 672  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| ||||||||||    
T  28949858 agctaaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatgaa 28949931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 5794936 - 5795108
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||| |||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||  | |||||    
T  5794936 tagggctggcaatgaaccgaaccaacccgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 5795035  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| ||||||| |||||||||    
T  5795036 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcaactcgttaggttcatga 5795108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 659
Target Start/End: Complemental strand, 33935653 - 33935493
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||| ||||||||||||| ||||||  | || |||||||||||||| | |||||||||||| |||||||||| || |||  |||||||    
T  33935653 tagggctggcaatgaatcgaaccaactcgacaatagtttgggactcgattcgataattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 33935554  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcg 659  Q
    || | ||||||||| |||||||| ||||||| ||||||||| ||  |||| ||||||||||    
T  33935553 agctgaaaattaagttcgttaaacaaatgagatgaacttgagctttatatagttcgactcg 33935493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 42072228 - 42072056
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||| |||||| ||||||||  |||||  || |||||||||||||  | || ||||||||||||||||||||||||| |||  | |||||    
T  42072228 tagggctgacaatgtaccgaaacaactcgattatagtttgacattcgattcgatatctaatccgttgaacttgattcatgaacctaacgagctggacttg 42072129  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  42072128 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 42072056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 43053017 - 43052845
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| ||||||||||||||||||||||||  ||||| ||| |||||| |||||| || || ||||||||||| |||||||||||||||||  | |||||    
T  43053017 tagggttggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaatgagctggacttg 43052918  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||   ||||||||| ||||||| || ||||| ||||||||| ||| |||| |||||||||||| | |||||||    
T  43052917 agccgaaaattaagttcgttaattagatgagctgaacttgagctacatatagttcgactcgttagattcatga 43052845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 44421901 - 44422074
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||||||| ||||||  | || ||||||||| |||| | |||||||||||| |||||||||| || |||  |||||||    
T  44421901 tagggctgtcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 44422000  T
Q  599 agtttaaaa-ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | |||| ||||| |||||||| ||||||| ||||||||| ||  |||| |||||||||| |||||||||||    
T  44422001 agctgaaaatttaagttcgttaaacaaatgagctgaacttgagctttatatagttcgactcggttggttcatga 44422074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 665847 - 666019
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| |||||| || || |||| || ||| ||||||||||||| |||  | |||||    
T  665847 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttaaatttggttcatgaacctaacgagctggacttg 665946  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| |||| |||| ||| |||| | |||||||||| |||||||||    
T  665947 agctgaaaattaagttcgttaattaaatgagctgaatttgagctacatatagctcgactcgttaggttcatga 666019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 499 - 639
Target Start/End: Complemental strand, 33124840 - 33124700
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||||| ||||||  || | ||||||||| |||| | |||||||||||| || ||||||| ||||| | |||||||    
T  33124840 tagggctggcaatgaaccgaaccaactcgacaatagtttgaaactcgattcgacaattaactcgttgaacttggtttatgaaccaaatgaattgaacttg 33124741  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    || | ||||||||| |||||||||||||||| |||| ||||    
T  33124740 agctgaaaattaagttcgttaaataaatgagctgaatttga 33124700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 508 - 671
Target Start/End: Complemental strand, 45176381 - 45176218
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    ||||||||||||| |||||||  |||||  || |||||| ||||||||| || ||||||||||| |||||||||| || |||  |||||| || | ||||    
T  45176381 caatgaaccgaacaaactcgattatagtttgacattcgactcgataattaatccgttgaacttggttcatgaaccaaacgagctgaactttagctgaaaa 45176282  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||| ||||||| |||||||||||||||||| ||| ||||  ||||||||||| |||||||||    
T  45176281 ttaagttcgttaattaaatgagttgaacttgagctacatataattcgactcgttaggttcatga 45176218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 222226 - 222398
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||||| ||||||  | || | ||||||| |||| | |||||||| ||| |||||||||| || |||  |||||||    
T  222226 tagggctggcaatgaaccgaaccaactcgacaatagtttgggacttgattcgacaattaactcgttgaatttggttcatgaaccaaacgagctgaacttg 222325  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |  | ||||||||  |||||||| ||||||| ||||||||| ||  |||| |||||||||| |||||||||||    
T  222326 aactgaaaattaaattcgttaaacaaatgagctgaacttgagctttatatagttcgactcggttggttcatga 222398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 498 - 668
Target Start/End: Original strand, 37401565 - 37401735
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||||||| ||||||||| |||||| ||||  | ||| ||  ||||||||||| |||||||| ||||||||||||||||||||| |||||| | |||||    
T  37401565 atagggctgacaatgaaccaaaccaattcgattagagttcgtaattcgattcgaaaattgatttgttgaacttgattcatgaaccaaatgagccaaactt 37401664  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    ||||| ||||||||| |||| || ||| |||| |||| |||| ||| || | ||| |||||||||| ||||    
T  37401665 gagttgaaaattaagttcgtcaactaattgagctgaagttgagctatatgtagttggactcgtttgattca 37401735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 503 - 671
Target Start/End: Original strand, 3930720 - 3930888
Alignment:
Q  503 gctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtt 602  Q
    ||||||||||||||||| ||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| | ||||||||||| |||  | ||||||| |    
T  3930720 gctggcaatgaaccgaaacaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggtccatgaacctaacgagctggacttgagct 3930819  T
Q  603 taaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
     ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| ||||||| ||| |||||    
T  3930820 gaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcaactcgttaggtacatga 3930888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 505 - 673
Target Start/End: Complemental strand, 45055867 - 45055699
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    ||||||||||||||  ||||||||| | ||| ||  | |||| ||| |||||  ||||||||||||| |||||||||| || ||| |||||||||| | |    
T  45055867 tggcaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaa 45055768  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    | |||||| ||||||| ||||||||||||||||||  || |||| |||||||||||||| |||| ||||    
T  45055767 agattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactcgtttgattcacgaac 45055699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 505 - 671
Target Start/End: Complemental strand, 10619060 - 10618894
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    |||| |||||||||| |||||||| ||||||  |  | ||||||||| |||| | |||||||||||| |||||||||  ||||||  ||||||||| | |    
T  10619060 tggctatgaaccgaatcaactcgacaatagtttggaactcgattcgacaattaactcgttgaacttggttcatgaactaaatgagctgaacttgagctga 10618961  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||||| |||||||||||||||| ||||||||| ||  |||| |||||||||  ||| |||||||    
T  10618960 aaattaagttcgttaaataaatgagctgaacttgagctgtatatagttcgactctgttgcttcatga 10618894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 673
Target Start/End: Original strand, 11595796 - 11595970
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||  ||||||||| | ||| ||  | |||| ||| |||||  ||||||||||||| |||||||||| || ||| ||||||||    
T  11595796 tagggctgacaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaacttg 11595895  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    || | || |||||| ||||||| |||||||||||| |||||  || |||| |||||||| |||||||||| ||||    
T  11595896 agctaaagattaagttcgttaactaaatgagttgaccttgagttatatatagttcgacttgtttggttcacgaac 11595970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 668
Target Start/End: Complemental strand, 3942321 - 3942152
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||||||  | ||| ||  ||||||||||| | ||||||| ||||||||| |||||||||| |||||  |  |||||    
T  3942321 tagggctgacaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacagttgattcattgaacttggttcatgaaccaaatgaaccagacttg 3942222  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || | ||||||||| |||| || ||| |||| ||||||||| ||| || | ||||| |||||||||||||    
T  3942221 agctgaaaattaagttcgtgaattaattgagctgaacttgagctatatgtagttcggctcgtttggttca 3942152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 20401141 - 20400969
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| || |||||||||||||||||||||| ||||| ||| |||||| ||| |||||  | | ||||| ||| |||||||||||| |||   |||||||    
T  20401141 tagggttgacaatgaaccgaaccaactcgaatatagttcgaaattcgactcggtaattagtccattgaatttggttcatgaacctactgaactgaacttg 20401042  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | || |||||| || |||| |||||||| |||||||||  || |||| ||||||||||||||||| ||||    
T  20401041 agctaaatattaagttctttaattaaatgagctgaacttgagttacatatagttcgactcgtttggttaatga 20400969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 33171534 - 33171706
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||| |||||||||||||| |||||| ||| | |||||  || ||||   | ||||||||||||| ||||||| ||||||  |||||||    
T  33171534 tagggctggcaatgatccgaaccaactcgataatagttcgaaactcgataagacaattatcttgttgaacttgatttatgaaccaaatgagctgaacttg 33171633  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| || |||||||||||||  ||||||||  |  |||| ||| |||||| |||||||||||    
T  33171634 agctaaaaattaagttcattaaataaatgagccgaacttgagttgtatatagtttgactcggttggttcatga 33171706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 499 - 673
Target Start/End: Original strand, 40480050 - 40480225
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaat-gagtcgaactt 597  Q
    ||||||||| ||||||| ||  ||||||||| | ||| ||  | |||| ||| |||||  ||||||||||||| |||||||||| ||  ||| |||||||    
T  40480050 tagggctggtaatgaactgatacaactcgaataaagttcggaactcgagtcggtaattagttcgttgaacttggttcatgaaccaaaacgagccgaactt 40480149  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    ||| | || |||||| ||||||| ||||||||||||||||||  || |||| ||||||||||||||||||| ||||    
T  40480150 gagctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactcgtttggttcacgaac 40480225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 498 - 671
Target Start/End: Original strand, 48505794 - 48505960
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||||||| |||||||||||||||||||||  |||||       |||| || |||  | || ||||||||||| |||||||||||||||||  | ||||    
T  48505794 atagggctgacaatgaaccgaaccaactcgattatagt-------tcgactcaatatctaatccgttgaacttggttcatgaacctaatgagctggactt 48505886  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||| | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| ||| |||||    
T  48505887 gagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggtacatga 48505960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 673
Target Start/End: Original strand, 23226999 - 23227173
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||| ||||| |||||||||||||| |||||| ||| | ||||||||| ||||   | |||||||||| | |||||| | ||||||  |||||||    
T  23226999 tagggctggtaatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggtacatgaatcaaatgagctgaacttg 23227098  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    || | ||||||||| ||||||||||||||||  ||||||||  |  |||| | | |||||| |||||||||||||    
T  23227099 agctgaaaattaagttcgttaaataaatgagccgaacttgagttgtatatagcttgactcggttggttcatgaac 23227173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 673
Target Start/End: Original strand, 23236152 - 23236326
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||| ||||| |||||||||||||| |||||| ||| | ||||||||| ||||   | |||||||||| | |||||| | ||||||  |||||||    
T  23236152 tagggctggtaatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggtacatgaatcaaatgagctgaacttg 23236251  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    || | ||||||||| ||||||||||||||||  ||||||||  |  |||| | | |||||| |||||||||||||    
T  23236252 agctgaaaattaagttcgttaaataaatgagccgaacttgagttgtatatagcttgactcggttggttcatgaac 23236326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 671
Target Start/End: Complemental strand, 48634531 - 48634420
Alignment:
Q  560 tcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcg 659  Q
    |||||||||||| |||||||||| ||||||| ||||||||| | ||||||||| ||||||||||||||||||  | ||||  | ||||| ||||||||||    
T  48634531 tcgttgaacttggttcatgaaccaaatgagttgaacttgagctaaaaattaagttcgttaaataaatgagttagaattgagttgaatatagttcgactcg 48634432  T
Q  660 tttggttcatga 671  Q
     ||| |||||||    
T  48634431 gttgattcatga 48634420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 558 - 639
Target Start/End: Original strand, 23237576 - 23237657
Alignment:
Q  558 attcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    |||||||| ||||| |||||||||||||| || |||||||||||| | ||||||| ||||||| ||||||||||||||||||    
T  23237576 attcgttggacttggttcatgaacctaattagccgaacttgagttaagaattaagttcgttaattaaatgagttgaacttga 23237657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 27231539 - 27231711
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||| ||  |  | ||| ||  ||||||||||||||||||||||| |||||||||||||| | | |||||| ||||||||    
T  27231539 tagggctgacaatgaaccgaaccagcttaattagagttcgtaattcgattcgataattgattcgtcgaacttgattcatgtatcaaatgagccgaacttg 27231638  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |  | ||||||||| |||| || ||| |||   |||||| | ||| || | ||| ||||||||||||||||||    
T  27231639 aactgaaaattaagttcgtcaactaattgaaccgaacttaagctatatgtagtttgactcgtttggttcatga 27231711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 496 - 671
Target Start/End: Complemental strand, 10096619 - 10096444
Alignment:
Q  496 aaatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaac 595  Q
    |||||||||||||||||||| ||  ||| ||||| ||||| ||| | |||| |||| ||||  ||| | ||||||| |||||||||| ||||||| ||||    
T  10096619 aaatagggctggcaatgaactgaggcaattcgaacatagttcgaaactcgactcgacaatttgttcatcgaacttggttcatgaaccaaatgagttgaac 10096520  T
Q  596 ttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||     |||||||| ||| ||| |||||||| ||||||| ||||| ||||  |||| |||||||| |||||||    
T  10096519 ttgaacgagaaattaagttcgctaactaaatgagctgaacttaaactacatataattcggctcgtttgattcatga 10096444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 499 - 668
Target Start/End: Complemental strand, 17608854 - 17608688
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||| | |||||||||||| |||||||| || ||| ||  |||||||||   ||||||||||| ||||||| || ||||||| |||||| ||||||||    
T  17608854 tagggccgacaatgaaccgaatcaactcgataaaagttcgtaattcgattc---aattgattcgtcgaacttggttgatgaaccaaatgagccgaacttg 17608758  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |  | ||||||||| |||| || ||| |||||||||||||| ||| || | |||| ||| | ||||||||    
T  17608757 atctgaaaattaagttcgtcaactaattgagttgaacttgatctatatgtagttcaacttggttggttca 17608688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 561 - 671
Target Start/End: Complemental strand, 26216355 - 26216245
Alignment:
Q  561 cgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgt 660  Q
    ||||||||||| || |||||||||| |||  | ||||||| | ||||||||| ||||||| |||| ||| ||||||||| ||| |||| |||||||||||    
T  26216355 cgttgaacttggtttatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaaggagctgaacttgagctacatatagttcgactcgt 26216256  T
Q  661 ttggttcatga 671  Q
    | |||||||||    
T  26216255 taggttcatga 26216245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 505 - 600
Target Start/End: Complemental strand, 389085 - 388990
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgag 600  Q
    ||||||||||||||| ||||||||  ||||| ||| |||| | |||||| || || ||||||||||| ||||||||||||| |||  |||||||||    
T  389085 tggcaatgaaccgaatcaactcgattatagttcgacattcaactcgatatttaatccgttgaacttggttcatgaacctaacgagctgaacttgag 388990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 573 - 671
Target Start/End: Complemental strand, 15434314 - 15434216
Alignment:
Q  573 ttcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||||||||||| |||  | ||||||| | ||||||||| ||||||| |||||||| ||||||||| ||| || | |||||||||||| | |||||||    
T  15434314 ttcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatctagttcgactcgttagcttcatga 15434216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 617
Target Start/End: Complemental strand, 37106971 - 37106853
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| ||||||||||||||||| |||| |  | ||| ||  |||||||||||||||| |||||| ||||||  || ||| ||| |||||| ||||||||    
T  37106971 tagggttggcaatgaaccgaaccgactcaattagagttcgtaattcgattcgataattaattcgtcgaacttagttaatgtaccaaatgagccgaacttg 37106872  T
Q  599 agtttaaaattaagctcgt 617  Q
    || | ||||||||| ||||    
T  37106871 agctaaaaattaagttcgt 37106853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 589
Target Start/End: Complemental strand, 41449884 - 41449795
Alignment:
Q  500 agggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgag 589  Q
    ||||||| |||||| |||||||||||||| |||||| ||| | ||||||||| ||||   |||||||||||| ||||||| || ||||||    
T  41449884 agggctgacaatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatctcgttgaacttggttcatgatccaaatgag 41449795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 548 - 639
Target Start/End: Original strand, 37101148 - 37101238
Alignment:
Q  548 tcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    ||||||||| ||  |||||||| |||||| ||| | ||||||| ||||||||||| ||||||||| | ||||||||||| |||| |||||||    
T  37101148 tcgataattaatctgttgaactcgattcacgaatcaaatgagt-gaacttgagttgaaaattaagtttgttaaataaataagtttaacttga 37101238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 499 - 586
Target Start/End: Original strand, 46652633 - 46652720
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaat 586  Q
    ||||||| | ||| ||||| ||||| ||||| ||||| ||| |||||||||||||||| ||  |||| ||||| ||||||||||||||    
T  46652633 tagggctagtaataaaccggaccaattcgaatatagttcgaaattcgattcgataattaatctgttggacttggttcatgaacctaat 46652720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 671
Target Start/End: Original strand, 2466579 - 2466689
Alignment:
Q  562 gttgaacttgattcatgaacctaatgag-tcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgt 660  Q
    |||||||||| |||| |||| ||||||| |  |||||||| | |||||| || |||||||||||||||| | ||||| ||||| || |  |||||||||     
T  2466579 gttgaacttggttcacgaacttaatgagctaaaacttgagctgaaaatttagttcgttaaataaatgagctaaacttaaactatatgtaattcgactcga 2466678  T
Q  661 ttggttcatga 671  Q
    |||||||||||    
T  2466679 ttggttcatga 2466689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 576 - 664
Target Start/End: Complemental strand, 37250102 - 37250014
Alignment:
Q  576 atgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttgg 664  Q
    ||||||| |||||| || ||||||| | ||||||||  |||||||  || |||| | |||||||||||||||| |||| ||||||||||    
T  37250102 atgaaccaaatgagccgcacttgagctgaaaattaatttcgttaaccaagtgagctaaacttgaactaaatatagttcaactcgtttgg 37250014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 570
Target Start/End: Original strand, 6866681 - 6866752
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaactt 570  Q
    |||||||| |||||||| |||| ||||||||||||||  |||| |||||||  ||||| |||| ||||||||    
T  6866681 tagggctgacaatgaactgaacaaactcgaaaatagtttgagactcgattcagtaattaattcattgaactt 6866752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 494 - 528
Target Start/End: Complemental strand, 15434355 - 15434321
Alignment:
Q  494 tgaaatagggctggcaatgaaccgaaccaactcga 528  Q
    |||| ||||||||||||||||||||||||||||||    
T  15434355 tgaagtagggctggcaatgaaccgaaccaactcga 15434321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 667
Target Start/End: Original strand, 23223561 - 23223622
Alignment:
Q  606 aattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttc 667  Q
    ||||||| ||||||| ||||||||||||||||||  || | || ||||||||||||| ||||    
T  23223561 aattaagttcgttaattaaatgagttgaacttgagttatagatagttcgactcgttttgttc 23223622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 5e-64; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 499 - 675
Target Start/End: Original strand, 3081718 - 3081894
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||| |||||||||||| ||| | ||||||||||||||| ||||||||||||| |||| ||||| |||||||||||||||    
T  3081718 tagggctggcaatgaaccgaaccagctcgaaaatagttcgatactcgattcgataattggttcgttgaacttggttcacgaaccaaatgagtcgaacttg 3081817  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  3081818 agttgaaaattaagctcgttaattaaatgagctgaacttgaactaagtatagttcgactcgtttggttcatgaacca 3081894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 499 - 677
Target Start/End: Complemental strand, 13312164 - 13311984
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagat--tcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaact 596  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||| ||| ||| ||||| |||||||||| |||||||||||||    
T  13312164 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatatactcgattcgataattggttcattggacttggttcatgaaccaaatgagtcgaact 13312065  T
Q  597 tgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  13312064 tgagttgaaaattaagttcgttaaataaatgagttgaacttgaacttagtatggttcaactcgtttggttcatgaaccagc 13311984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 7437444 - 7437268
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||| |||||||||||| |||||||||||||| ||| | ||||||||||||| | ||||||||||||| |||| ||||| ||||||||||||||     
T  7437444 tagggctggtaatgaaccgaactaactcgaaaatagttcgatactcgattcgataatgggttcgttgaacttggttcacgaaccaaatgagtcgaacttt 7437345  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  7437344 agttgaaaattaagctcgttaaataaatgagctgaacttgaactaagtatagttcgactcgtttggttcatgaacca 7437268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 5640252 - 5640421
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  | ||| ||  ||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||||||    
T  5640252 tagggctggcaatgaaccgaaccaactcgattagagttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 5640351  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |  | ||||||||| |||| || ||| |||| ||||||||||||| |||| |||||||||||||||||||    
T  5640352 aactgaaaattaagttcgtcaactaattgagctgaacttgaactatatatagttcgactcgtttggttca 5640421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 497 - 668
Target Start/End: Original strand, 10961794 - 10961965
Alignment:
Q  497 aatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaact 596  Q
    ||||||||||||||||||||||||||||||||  | |||  |  ||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||| |    
T  10961794 aatagggctggcaatgaaccgaaccaactcgattaaagtttgtaatttgattcgacaattgattcgttgaacttggttcatgaaccaaatgagtcgaatt 10961893  T
Q  597 tgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |||| | ||||||||| |||| || ||| |||| ||||||||||||| || | |||||||||||||||||||    
T  10961894 tgagctgaaaattaagttcgtcaactaattgagctgaacttgaactatatgtagttcgactcgtttggttca 10961965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 508 - 675
Target Start/End: Complemental strand, 18099947 - 18099780
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    ||||||||| |||||||||||||| |||  |||| ||||||||||||| ||||||||||||||| |||| ||||| ||||||||||| ||||||| | ||    
T  18099947 caatgaaccaaaccaactcgaaaaaagtttgagactcgattcgataatggattcgttgaacttggttcacgaaccaaatgagtcgaatttgagttaacaa 18099848  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
    ||||| |||||||||||||||| ||||||||| |||   || |||| | |||||||||||||||||||    
T  18099847 ttaagttcgttaaataaatgagatgaacttgagctatgcatagttcaattcgtttggttcatgaacca 18099780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 4441301 - 4441473
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||| ||||||||||||||||||||||| |||||| ||| | ||||||||| ||||   |||||||||||| |||| ||||  ||||||  |||||||    
T  4441301 tagggccggcaatgaaccgaaccaactcgacaatagttcgaaactcgattcgacaattagctcgttgaacttggttcacgaactaaatgagctgaacttg 4441400  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||| ||||||||| |||||||||||||||| ||||||||||||  |||| |||||| ||| |||||||||||    
T  4441401 agttgaaaattaagttcgttaaataaatgagctgaacttgaactgtatatagttcgattcggttggttcatga 4441473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 508 - 639
Target Start/End: Complemental strand, 18095650 - 18095519
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    ||||||||| ||||||||| |||| |||  |||| ||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||    
T  18095650 caatgaaccaaaccaactcaaaaaaagtttgagactcgattcgataatggattcgttgaacttggttcacgaaccaaataagtcgaacttgagttaaaaa 18095551  T
Q  608 ttaagctcgttaaataaatgagttgaacttga 639  Q
    ||||| |||||||||||||||| |||||||||    
T  18095550 ttaagttcgttaaataaatgagatgaacttga 18095519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 499 - 629
Target Start/End: Complemental strand, 17441298 - 17441168
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| |||||||||||||||||||| |||||||||| ||| | |||||| | ||||| |||||||||||||  |||||||||| ||||||| |||||||    
T  17441298 tagggttggcaatgaaccgaaccaacccgaaaatagttcgaaactcgatttggtaattaattcgttgaacttagttcatgaaccaaatgagttgaacttg 17441199  T
Q  599 agtttaaaattaagctcgttaaataaatgag 629  Q
    |||| |||||||||||||| |||||||||||    
T  17441198 agttgaaaattaagctcgtcaaataaatgag 17441168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 1501988 - 1501816
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||||||| ||| || ||| | |||||| || |||| | |||||||||||  |||||||||| |||||  ||||||||    
T  1501988 tagggctgacaatgaaccgaaccaactcgacaattgttcgaaactcgatttgacaattaactcgttgaacttcgttcatgaaccaaatgaaccgaacttg 1501889  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||||||||||||   ||||| | ||  |||| |||||||||| |||||||||||    
T  1501888 agctgaaaattaagttcgttaaataaatgagccaaacttaagctgtatatagttcgactcggttggttcatga 1501816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 6999407 - 6999235
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||| | |||| || |||| |||||||| ||||||  |||| |||||||||||||| |||||||||||||| || ||||||  ||||||  |||||||    
T  6999407 tagggcagacaataaatcgaagcaactcgacaatagtttgagactcgattcgataattaattcgttgaacttggttaatgaactaaatgagctgaacttg 6999308  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| | |||||| ||||||  ||||||||||||  |||| |||||||||| |||||||||||    
T  6999307 agctgaaaattaagtttgttaaacaaatgaactgaacttgaactttatatagttcgactcggttggttcatga 6999235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 10346861 - 10346689
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||| |||||| ||||  ||||| ||| |||||| || |||  | || ||||||||||| ||||||||||||| |||  | |||||    
T  10346861 tagggctggcaatgaaccaaaccaaatcgattatagttcgacattcgactctatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 10346762  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| |||||||||  || |||| ||||||||||||  ||||||||    
T  10346761 agctgaaaattaagttcgttaattaaatgagctgaacttgagttacatatagttcgactcgttaagttcatga 10346689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 502 - 673
Target Start/End: Complemental strand, 33110595 - 33110424
Alignment:
Q  502 ggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagt 601  Q
    |||||||||||||||||  ||||||||| | ||| ||  | |||| ||| |||||  ||||||||||||| |||||||||| || ||| ||||||| ||     
T  33110595 ggctggcaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaacttaagc 33110496  T
Q  602 ttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    | || |||||| ||||||| ||||||||| ||||||||  || |||| ||||||||||||||||||| ||||    
T  33110495 taaagattaagttcgttaactaaatgagtcgaacttgagttatatatagttcgactcgtttggttcacgaac 33110424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 8200771 - 8200610
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||| |||||||||||  ||||| ||| |||||| |||||| || || |||||||||||||||||||||||||            |    
T  8200771 tagggctgacaatgaaccaaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttgattcatgaacctaa-----------cg 8200683  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||||||||||||| ||| |||| |||||||||||| |||||||||    
T  8200682 agctgaaaattaagttcgttaattaaatgagttgaacttgagctacatatagttcgactcgttaggttcatga 8200610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 9950760 - 9950929
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||| |||| ||||||||  | ||| |   ||| ||||||| || |||||| | ||||||| |||||||||| |||||| ||||||||    
T  9950760 tagggctggcaatgaatcgaatcaactcgattaaagttcataatttgattcgacaaatgattcatcgaacttggttcatgaaccaaatgagccgaacttg 9950859  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |||| ||||||||| |||| || ||| |||| ||||||||| ||| || | |||| ||||||||||||||    
T  9950860 agttgaaaattaagttcgtcaactaattgagctgaacttgagctatatgtagttcaactcgtttggttca 9950929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 11460014 - 11460178
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| |||||||||||||| ||||||| | |||||| ||  | ||||||||||||||||||||||||||||| |||||||||| ||||        |||    
T  11460014 tagggttggcaatgaaccgatccaactcaataatagttcggaactcgattcgataattgattcgttgaacttggttcatgaaccaaatg--------ttg 11460105  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | | ||||||| | |||||||||||||| |||||||||  | ||||| |||||||||| |||||| ||||    
T  11460106 agctgagaattaagtttgttaaataaatgagctgaacttgagttgaatatagttcgactcggttggtttatga 11460178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 546 - 668
Target Start/End: Original strand, 27984937 - 27985059
Alignment:
Q  546 attcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaa 645  Q
    |||||| ||||||||||| ||||||| || ||||||| |||||| |||||||||  | ||||||||| | || || ||| |||| ||||||||||||| |    
T  27984937 attcgacaattgattcgtcgaacttggtttatgaaccaaatgagccgaacttgaactgaaaattaagtttgtaaactaattgagctgaacttgaactaga 27985036  T
Q  646 tatggttcgactcgtttggttca 668  Q
    | | ||||||||||||| |||||    
T  27985037 tgtagttcgactcgtttagttca 27985059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 566 - 673
Target Start/End: Complemental strand, 22295989 - 22295882
Alignment:
Q  566 aacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggt 665  Q
    |||||| |||||||||| || ||| |||||||||| | || |||||| ||||||| |||||| |||||| ||||  || |||| |||| |||| ||||||    
T  22295989 aacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaagtaaatgtgttgaatttgagttatatatagttcaactcttttggt 22295890  T
Q  666 tcatgaac 673  Q
    ||||||||    
T  22295889 tcatgaac 22295882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 639
Target Start/End: Complemental strand, 32163635 - 32163541
Alignment:
Q  545 gattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    ||||||| |||| | | ||||||| || |||||||||||||||||   |||||||||| ||||||||| ||||||| |||||||| | |||||||    
T  32163635 gattcgacaattaactggttgaacatggttcatgaacctaatgagctaaacttgagttgaaaattaagttcgttaactaaatgagcttaacttga 32163541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 639
Target Start/End: Original strand, 21093268 - 21093384
Alignment:
Q  523 actcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaat 622  Q
    |||||||| ||||  ||||||||||||  | ||| |||||||||||||  ||| | || | ||||| ||||||||||||| ||||| || |||||||||     
T  21093268 actcgaaagtagtttgagattcgattctttgattaattcgttgaacttagttcgtaaatcaaatgactcgaacttgagttgaaaatcaatctcgttaaac 21093367  T
Q  623 aaatgagttgaacttga 639  Q
    || |||||| |||||||    
T  21093368 aactgagttaaacttga 21093384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 576 - 671
Target Start/End: Complemental strand, 30774101 - 30774006
Alignment:
Q  576 atgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||||| |||||||| || ||||||| || ||||||| ||||||||||||||| ||||||| | |||  |||  | |||||| ||||||||||||    
T  30774101 atgaaccaaatgagtcaaatttgagttgaatattaagcacgttaaataaatgagatgaacttaagctatgtataatccgactcatttggttcatga 30774006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 8e-57; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 499 - 675
Target Start/End: Complemental strand, 40459061 - 40458885
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| |||||||||||||||||| |||||||||  || | ||||||| ||||||| || |||||||||| |||| ||||| |||||||||||||||    
T  40459061 tagggctgacaatgaaccgaaccaacttgaaaatagtttgatactcgattcaataattggtttgttgaacttggttcacgaaccaaatgagtcgaacttg 40458962  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  40458961 agttgaaaattaagctcgttaaataaatgagctgaacttgaactaagtatagttcgactcgtttggttcatgaacca 40458885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 502 - 669
Target Start/End: Original strand, 11006977 - 11007142
Alignment:
Q  502 ggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagt 601  Q
    ||||| ||||||||||||||||||||||||||||  ||   ||||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  11006977 ggctgacaatgaaccgaaccaactcgaaaatagtttgac--tcgatccgataattgattcgttgaacttggttcacgaaccaaatgagtcgaacttgagt 11007074  T
Q  602 ttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    | ||||||||||||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  11007075 tgaaaattaagctcgttaaataaatgagttgaacttgaaataagtataattcgactcgtttggttcat 11007142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 543 - 666
Target Start/End: Complemental strand, 13829974 - 13829851
Alignment:
Q  543 tcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaact 642  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||| |    
T  13829974 tcgattcgataattgattcgttgaacttggttcataaaccaaatgagttgaacttgagttaaaaattaaactcgttaattaaatgagttgaacttgaatt 13829875  T
Q  643 aaatatggttcgactcgtttggtt 666  Q
     | |||||||||||||||||||||    
T  13829874 gagtatggttcgactcgtttggtt 13829851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 498 - 640
Target Start/End: Original strand, 27464571 - 27464713
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| | |||||||||||||||| |||||| ||| |||||||||| ||||||||||||||    
T  27464571 atagggctgacaatgaaccgaaccaactcgaaaatagttcgagacttgattcgataattgatttgttgaatttggttcatgaaccaaatgagtcgaactt 27464670  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaa 640  Q
    || || ||||||||| ||  |||||||| |||||| |||||||    
T  27464671 gaattgaaaattaagttccctaaataaaggagttggacttgaa 27464713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 3409188 - 3409360
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||||| |||||| ||| | ||||||||| |||| | |||||||||||| |||||||||| |||||   |||||||    
T  3409188 tagggctggcaatgaaccgaaccaactcgacaatagttcgaaactcgattcgacaattaactcgttgaacttggttcatgaaccaaatgaactgaacttg 3409287  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| |||||||||||||||| |||| |||| ||  |||| |||||||||| ||| |||||||    
T  3409288 agctgaaaattaagttcgttaaataaatgagctgaatttgagctgtatatagttcgactcgattgattcatga 3409360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 27634811 - 27634639
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| |||||| || || ||||||||||  ||||||||||||| |||  | |||||    
T  27634811 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttagttcatgaacctaacgagctggacttg 27634712  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| ||| |||||||| |||||||||    
T  27634711 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagtttgactcgttaggttcatga 27634639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 33831635 - 33831463
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| ||||||  | || ||||||| ||| ||||||||||||| |||  | |||||    
T  33831635 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaatttggttcatgaacctaacgagctggacttg 33831536  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  33831535 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 33831463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 509 - 671
Target Start/End: Complemental strand, 10412570 - 10412408
Alignment:
Q  509 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaat 608  Q
    |||||||| |||||||||||||||||| |||||||||||||| |||||  |||||| || | | ||| | |||   |||||||||||||||||| |||||    
T  10412570 aatgaaccaaaccaactcgaaaatagttcgagattcgattcggtaattagttcgttaaattcggttcgtaaactagatgagtcgaacttgagttaaaaat 10412471  T
Q  609 taagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||||||||||||||||||||| |||||| ||| ||||  | |||||| ||||||||||||    
T  10412470 taagctcgttaaataaatgagttggacttgagctatatataatccgactcatttggttcatga 10412408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 499 - 668
Target Start/End: Complemental strand, 11028048 - 11027879
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||| |  | ||| ||  |||| |||||||||||||||||| ||||||| |||||||||| |||||| ||||||||    
T  11028048 tagggctggcaatgaaccgaaccaactcaattagagttcgtaattcaattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 11027949  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |  | ||||||||| |||| || ||| |||| ||||||||| ||| || | |||||||||||||||||||    
T  11027948 aactaaaaattaagttcgtcaactaattgagctgaacttgagctatatgtagttcgactcgtttggttca 11027879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 498 - 671
Target Start/End: Complemental strand, 36538797 - 36538624
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||||||| ||||||||| |||||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||| | ||||    
T  36538797 atagggctgacaatgaaccaaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagttggactt 36538698  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||| | ||||||||| ||||||| |||||||| | ||||||| ||| |||| |||||||||||| |||||||||    
T  36538697 gagctgaaaattaagttcgttaattaaatgagctaaacttgagctacatatagttcgactcgttaggttcatga 36538624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 553 - 677
Target Start/End: Complemental strand, 1094543 - 1094419
Alignment:
Q  553 aattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggtt 652  Q
    |||||| || ||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||  | | |||||||    
T  1094543 aattgactcattgaatttggttcatgaaccaaatgagtcgaacttgagttgaaaattaagctcgttgaataaatgagtcgaacttgagttgagtatggtt 1094444  T
Q  653 cgactcgtttggttcatgaaccagc 677  Q
    |||||||||||| ||||||||||||    
T  1094443 cgactcgtttggatcatgaaccagc 1094419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 677
Target Start/End: Complemental strand, 29807046 - 29806879
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||| || | ||||| |||||| |||||       
T  29807046 tagggctggcaatgaaccgaaccaattcgaaaatagttcaagactcgattcgataattgattcgttgaacttggtttacgaaccaaatgagccgaac--- 29806950  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
            | ||| | ||||||||||||||||||||||||| ||   |||||||||||||||| |||||||||||||||    
T  29806949 --------actaaacccgttaaataaatgagttgaacttgagcttcgtatggttcgactcgttaggttcatgaaccagc 29806879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 498 - 670
Target Start/End: Original strand, 34116172 - 34116344
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||||| ||||||||| ||||||||||||||  | ||| ||  ||||||||  |||||||||| || ||||||  |||||||||| |||||| |||||||    
T  34116172 ataggggtggcaatgagccgaaccaactcgattagagttcgtaattcgatttaataattgatttgtcgaacttagttcatgaaccaaatgagccgaactt 34116271  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatg 670  Q
    ||| ||||||||||| ||| ||||||| |||| ||||||||| ||| || | |||||||||||||||||||||    
T  34116272 gagcttaaaattaagttcgctaaataattgagctgaacttgagctatatgtagttcgactcgtttggttcatg 34116344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 500 - 666
Target Start/End: Complemental strand, 30713295 - 30713129
Alignment:
Q  500 agggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttga 599  Q
    |||||||||||||||||||||||||||||  |  || ||  ||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||| |||    
T  30713295 agggctggcaatgaaccgaaccaactcgattagtgttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacatga 30713196  T
Q  600 gtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggtt 666  Q
    | | ||| ||||| |||| || ||| |||||||||||||| ||| ||   |||||||||||||||||    
T  30713195 gctgaaatttaagttcgtcaactaattgagttgaacttgagctatatgcagttcgactcgtttggtt 30713129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 502 - 659
Target Start/End: Original strand, 44740486 - 44740643
Alignment:
Q  502 ggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagt 601  Q
    ||||||||||||||||||||||||||| ||||||  | || ||||||||| |||| | |||||||||||| |||||||||| || |||  |||||||||     
T  44740486 ggctggcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttgagc 44740585  T
Q  602 ttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcg 659  Q
    | ||||||||| |||||||| ||||||| ||||||||| ||  |||| ||||||||||    
T  44740586 taaaaattaagttcgttaaacaaatgagctgaacttgagctttatatagttcgactcg 44740643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 516 - 670
Target Start/End: Original strand, 32713013 - 32713168
Alignment:
Q  516 cgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaa-cttgattcatgaacctaatgagtcgaacttgagtttaaaattaagct 614  Q
    ||||| ||||||||||||   | | |||| ||| ||||| |||||||||||| ||||||||||||||| |||||||||||| |  ||| |||||||||||    
T  32713013 cgaacaaactcgaaaataactcaatattcaatttgataaatgattcgttgaaacttgattcatgaaccaaatgagtcgaacatatgttgaaaattaagct 32713112  T
Q  615 cgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatg 670  Q
    |||||||||||| | |||||||| |||| | |||||||||||||||||| ||||||    
T  32713113 cgttaaataaataatttgaacttaaactgagtatggttcgactcgtttgattcatg 32713168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 501 - 671
Target Start/End: Complemental strand, 26436491 - 26436322
Alignment:
Q  501 gggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgag 600  Q
    |||| |||||||||||||||||||||||  ||| |  || |||||| |||||| || || ||||||||||| ||||||||||||| |||  |||| ||||    
T  26436491 gggccggcaatgaaccgaaccaactcgattataatt-gacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctgaacgtgag 26436393  T
Q  601 tttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
     | ||||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  26436392 ctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 26436322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 498 - 671
Target Start/End: Complemental strand, 41959284 - 41959111
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||||||| |||||||||||| ||||||||  ||||| ||| |||||| ||||||  | || ||||||||||||||||||||||||| |||  | ||||    
T  41959284 atagggctgacaatgaaccgaatcaactcgattatagttcgacattcgactcgatatctaatccgttgaacttgattcatgaacctaacgagctggactt 41959185  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||| | ||||||||| ||||||| |||||||| ||||| | | ||| |||| |||||||||||| |||| ||||    
T  41959184 gagctgaaaattaagttcgttaattaaatgagctgaacataagctacatatagttcgactcgttaggttaatga 41959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 559 - 668
Target Start/End: Original strand, 2647034 - 2647143
Alignment:
Q  559 ttcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactc 658  Q
    ||||||||||||| |||||||||| || ||| |||||||||| | ||||||||| ||||||| ||||| ||||||||||||  || |||| |||||||||    
T  2647034 ttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaaaattaagttcgttaactaaataagttgaacttgagttatatatagttcgactc 2647133  T
Q  659 gtttggttca 668  Q
    ||||||||||    
T  2647134 gtttggttca 2647143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 27902439 - 27902607
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| || ||||||||||||||||||  | ||| ||  | ||||||||| ||||||||||| ||||||| |||||||||  |||||  ||||||||    
T  27902439 tagggctgacattgaaccgaaccaactcgattaaagttcgtaaatcgattcgacaattgattcgtcgaacttggttcatgaacaaaatgaaccgaacttg 27902538  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || | ||||||||  |||| || ||| |||||||||||||| ||| || | |||||||||||||||||||    
T  27902539 agctgaaaattaa-atcgtcaactaattgagttgaacttgagctatatgtagttcgactcgtttggttca 27902607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 543 - 675
Target Start/End: Original strand, 2328335 - 2328467
Alignment:
Q  543 tcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaact 642  Q
    |||||||| ||||| ||||||| ||||| ||||||||    |||||||| |||||||||| |||||||| | | | |||||||||||||||||||||| |    
T  2328335 tcgattcggtaattaattcgttaaactttattcatgatttaaatgagtcaaacttgagttgaaaattaaacccttcaaataaatgagttgaacttgaatt 2328434  T
Q  643 aaatatggttcgactcgtttggttcatgaacca 675  Q
    | |||| ||||||||||| || |||||||||||    
T  2328435 atatatagttcgactcgtgtgattcatgaacca 2328467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 511 - 671
Target Start/End: Complemental strand, 34064833 - 34064673
Alignment:
Q  511 tgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaatta 610  Q
    |||||||||||||||| |  ||||| ||| |||||| || |||  | || ||||||||||  ||||||||||||| |||  | ||||||| | |||||||    
T  34064833 tgaaccgaaccaactcaattatagttcgacattcgactcaatatctaatccgttgaacttagttcatgaacctaacgagctggacttgagctgaaaatta 34064734  T
Q  611 agctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  34064733 agttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 34064673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 541 - 668
Target Start/End: Original strand, 38409613 - 38409740
Alignment:
Q  541 attcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaa 640  Q
    ||||||||||| ||||||||||| ||| ||| |||||||||| |||||| |||||||||| | ||||||||| | || || ||| |||| ||||||| ||    
T  38409613 attcgattcgacaattgattcgtcgaatttggttcatgaaccaaatgagccgaacttgagctgaaaattaagtttgtgaactaattgagctgaactttaa 38409712  T
Q  641 ctaaatatggttcgactcgtttggttca 668  Q
    ||| |||| ||||| |||||||||||||    
T  38409713 ctatatatagttcggctcgtttggttca 38409740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 525 - 669
Target Start/End: Original strand, 12070540 - 12070684
Alignment:
Q  525 tcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataa 624  Q
    |||||||||||  |||| || ||||| ||||| |||||||||| ||||||| | |||  ||||| ||||||||||||| ||||||||  |||||||| ||    
T  12070540 tcgaaaatagtttgagactcaattcggtaattaattcgttgaatttgattcgtcaactaaatgaatcgaacttgagttgaaaattaaattcgttaaacaa 12070639  T
Q  625 atgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    || |||| ||||| |||||  ||| |||||||||||||| |||||    
T  12070640 ataagttaaacttaaactatgtatagttcgactcgtttgcttcat 12070684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 503 - 637
Target Start/End: Original strand, 24844670 - 24844804
Alignment:
Q  503 gctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtt 602  Q
    |||| |||||| |||||||||||||| |||||| ||| | ||||||||  ||||   |||||||||||| |||||||||| ||||||  ||||||||| |    
T  24844670 gctgacaatgatccgaaccaactcgataatagttcgaaactcgattcggcaattatctcgttgaacttggttcatgaaccaaatgagctgaacttgagct 24844769  T
Q  603 taaaattaagctcgttaaataaatgagttgaactt 637  Q
     ||||||||  ||| |||||||||||| |||||||    
T  24844770 gaaaattaaattcgataaataaatgagctgaactt 24844804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 499 - 610
Target Start/End: Original strand, 20203714 - 20203825
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||| ||||| ||||||||||||||||  | ||| ||  ||||||||| | ||||||||||||||||||| |||||||||| |||||||| ||| ||    
T  20203714 tagggctagcaattaaccgaaccaactcgattaaagttcgtaattcgattcaacaattgattcgttgaacttggttcatgaaccaaatgagtcaaacctg 20203813  T
Q  599 agtttaaaatta 610  Q
    || | |||||||    
T  20203814 agctgaaaatta 20203825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 629
Target Start/End: Complemental strand, 16544146 - 16544016
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||| ||| |||||||||||| ||||||| ||| ||| | ||| |||||||||||||  ||| |||||||||| ||||  |||| ||| | | ||| |||    
T  16544146 taggactgacaatgaaccgaagcaactcggaaaaagttcaagactcgattcgataatgtatttgttgaacttggttcaccaaccaaataatttgaatttg 16544047  T
Q  599 agtttaaaattaagctcgttaaataaatgag 629  Q
    |||| ||||||||| ||||||||||||||||    
T  16544046 agttaaaaattaagttcgttaaataaatgag 16544016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 509 - 635
Target Start/End: Complemental strand, 17616397 - 17616271
Alignment:
Q  509 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaat 608  Q
    |||||| ||||||||||||||||||||  || | ||||||||| ||||   |||||||| ||||| |||||||| |||||| |||||||||| | |||||    
T  17616397 aatgaatcgaaccaactcgaaaatagttagaaactcgattcgacaattatctcgttgaatttgatacatgaaccaaatgagccgaacttgagctaaaaat 17616298  T
Q  609 taagctcgttaaataaatgagttgaac 635  Q
    |||| || |||| |||| |||| ||||    
T  17616297 taagttcattaactaaacgagtggaac 17616271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 629
Target Start/End: Original strand, 33163980 - 33164110
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||| || ||||||||||||||| ||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||  | |||||    
T  33163980 tagggccggtaatgaaccgaaccaattcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 33164079  T
Q  599 agtttaaaattaagctcgttaaataaatgag 629  Q
    || | ||||||||| ||||||| ||||||||    
T  33164080 agctgaaaattaagttcgttaattaaatgag 33164110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 505 - 627
Target Start/End: Complemental strand, 41332365 - 41332243
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    |||||||||||| |||||||||||| ||||| ||| | ||||||||| |||| | | |||||||||| ||||| |||| | ||||| ||| ||||| | |    
T  41332365 tggcaatgaaccaaaccaactcgaatatagttcgaaactcgattcgacaattaacttgttgaacttggttcataaaccaattgagttgaatttgagctga 41332266  T
Q  605 aaattaagctcgttaaataaatg 627  Q
    |||||||| | ||||||||||||    
T  41332265 aaattaagtttgttaaataaatg 41332243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 562 - 671
Target Start/End: Complemental strand, 2578156 - 2578047
Alignment:
Q  562 gttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtt 661  Q
    ||||||||||||||||||| | ||||||  ||||||||| | ||||||||  |||||||||||||||||| ||||| | ||| |||| | |||||||| |    
T  2578156 gttgaacttgattcatgaatcaaatgagctgaacttgagctgaaaattaaattcgttaaataaatgagttaaacttaagctatatatcgatcgactcggt 2578057  T
Q  662 tggttcatga 671  Q
    || |||||||    
T  2578056 tgattcatga 2578047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 508 - 648
Target Start/End: Complemental strand, 9753237 - 9753098
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    ||||||||||| |||| ||||| | ||| ||||||||||||||| |||||||||||| |  ||| |||||||||| ||||||  |||| |||   |||||    
T  9753237 caatgaaccgagccaagtcgaacaaagttcgagattcgattcgacaattgattcgttaagtttggttcatgaaccaaatgagaagaacgtga-actaaaa 9753139  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatat 648  Q
    |||||  ||  || |||||||||||||||||| ||| ||||    
T  9753138 ttaagtccggcaactaaatgagttgaacttgagctatatat 9753098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 503 - 635
Target Start/End: Original strand, 17368994 - 17369125
Alignment:
Q  503 gctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtt 602  Q
    |||| ||||||||||| |||||||||| ||||| ||  | || | |||| |||| | |||||||| ||  || ||||||| |||||||||||||||||||    
T  17368994 gctgacaatgaaccgagccaactcgaatatagttcggaactcaactcgacaattaactcgttgaatttagtttatgaacc-aatgagtcgaacttgagtt 17369092  T
Q  603 taaaattaagctcgttaaataaatgagttgaac 635  Q
     ||||||||  | ||||| ||||||||||||||    
T  17369093 gaaaattaaatttgttaagtaaatgagttgaac 17369125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 499 - 567
Target Start/End: Complemental strand, 40680349 - 40680281
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaa 567  Q
    |||| ||||||||||||||||||||||| | |||||| ||  |||||||||||||||||| ||||||||    
T  40680349 taggactggcaatgaaccgaaccaactcaataatagttcggaattcgattcgataattgactcgttgaa 40680281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 499 - 614
Target Start/End: Complemental strand, 28968960 - 28968845
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||| || |||| ||| ||||||  |||| |||||||||||||| | |||||||| |   ||| |||||| |||||||| || |||    
T  28968960 tagggctgacaatgaaccaaatcaacccgagaatagtttgagactcgattcgataattaactcgttgaattcagttcgtgaaccaaatgagtcaaatttg 28968861  T
Q  599 agtttaaaattaagct 614  Q
    |||| |||||||||||    
T  28968860 agttgaaaattaagct 28968845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 599
Target Start/End: Complemental strand, 31000951 - 31000880
Alignment:
Q  528 aaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttga 599  Q
    ||||||||  ||||||||||||| ||||| ||||| ||||||||||||||||||| ||||| | ||||||||    
T  31000951 aaaatagtttgagattcgattcggtaattaattcgatgaacttgattcatgaaccaaatgatttgaacttga 31000880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 593 - 671
Target Start/End: Complemental strand, 39690216 - 39690138
Alignment:
Q  593 aacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||||| | ||||||||| |||| || ||| |||||||||||||| ||| || | ||||||||||||||||||||||    
T  39690216 aacttgagctgaaaattaagttcgtcaactaattgagttgaacttgagctatatgtagttcgactcgtttggttcatga 39690138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 614 - 669
Target Start/End: Complemental strand, 18667776 - 18667721
Alignment:
Q  614 tcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    ||||||||||||| ||||||||||||  || |||| ||||||||||||||||||||    
T  18667776 tcgttaaataaataagttgaacttgagttatatatagttcgactcgtttggttcat 18667721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 508 - 630
Target Start/End: Original strand, 45383147 - 45383269
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    ||||||||||||| |||| |||  |||| |||  |||||||| | |||||| ||| ||||||||||||||||||| |||| |   || ||||| ||||||    
T  45383147 caatgaaccgaactaacttgaatttagttcgaagttcgattcaacaattgactcgatgaacttgattcatgaaccaaatgcgctaaatttgagcttaaaa 45383246  T
Q  608 ttaagctcgttaaataaatgagt 630  Q
    ||||  || |||| |||||||||    
T  45383247 ttaatttcattaattaaatgagt 45383269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 614 - 671
Target Start/End: Complemental strand, 33831452 - 33831395
Alignment:
Q  614 tcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  33831452 tcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 33831395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 569 - 669
Target Start/End: Complemental strand, 34582954 - 34582854
Alignment:
Q  569 ttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |||||| ||||| | ||| ||| ||||||||  |||||||||| |||||||||||||||| ||| ||||||  || |||| |||| |||| ||| |||||    
T  34582954 ttgatttatgaatcaaatcagtagaacttgaccttaaaattaaactcgttaaataaatgaattggacttgagttatatatagttccactcatttagttca 34582855  T
Q  669 t 669  Q
    |    
T  34582854 t 34582854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 669
Target Start/End: Complemental strand, 40680256 - 40680191
Alignment:
Q  604 aaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    ||||||| | |||||||||||||||| |||| ||||  || |||| |||||||||| |||||||||    
T  40680256 aaaattatgttcgttaaataaatgagctgaatttgagttatatatagttcgactcgattggttcat 40680191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 110; Significance: 5e-55; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 498 - 655
Target Start/End: Complemental strand, 21228 - 21072
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| || |||||||||||    
T  21228 atagggctgacaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattgattcgttgaacttggttcatgaacc-aaagagtcgaactt 21130  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcga 655  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||| |||| |||||    
T  21129 gagttgaaaattaagctcattaaataaatgagttgaacttgagctaagtatgattcga 21072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 102; Significance: 3e-50; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 505 - 673
Target Start/End: Original strand, 32791 - 32957
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||| ||||| ||||||||||||| ||||   ||| |||||||||||||||||||      
T  32791 tggcaatgaaccgaaccaactcgaaaatagttcgatactcgattcgacaattggttcgttgaacttggttcac--accaaatgagtcgaacttgagttgt 32888  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||    
T  32889 aaattaagctcgttaaataaatgaattgaacttgaacttagtatggttcgactcgtctggttcatgaac 32957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 2e-42; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 453623 - 453451
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| ||||||  | || ||||||||||| ||||||||||||| |||  | |||||    
T  453623 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 453524  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||| ||||||||| ||||||| |||||||||||||||||| ||| |||| |||||||||||| |||||||||    
T  453523 agttgaaaattaagttcgttaattaaatgagttgaacttgagctacatatagttcgactcgttaggttcatga 453451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 498 - 675
Target Start/End: Complemental strand, 22564147 - 22563970
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    |||| |||||||| ||||||| |||||||||||||| |  || ||| |||||| |||||| ||||||||||||| |||||||||| ||| | ||||||||    
T  22564147 atagagctggcaacgaaccgatccaactcgaaaataatttgaaatttgattcggtaattgtttcgttgaacttggttcatgaaccaaataaatcgaactt 22564048  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaacca 675  Q
    ||||| |||||||||||||| |||| |||||   |||||||||||| ||||  |||||||||||||||||||||||||    
T  22564047 gagttgaaaattaagctcgtcaaatgaatgaaccgaacttgaactacatataattcgactcgtttggttcatgaacca 22563970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 639
Target Start/End: Complemental strand, 1091867 - 1091727
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||| |||| ||||||| |||| ||||| ||||||||  |||| |||||||||||||| ||||||||||||||||||||||||| || ||||||||| ||    
T  1091867 taggactggtaatgaactgaacaaactcaaaaatagtttgagactcgattcgataattaattcgttgaacttgattcatgaaccaaacgagtcgaacctg 1091768  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    |||||||||||||| |||| ||| |||||||||||||||||    
T  1091767 agtttaaaattaagttcgtcaaacaaatgagttgaacttga 1091727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 498 - 668
Target Start/End: Original strand, 33279976 - 33280146
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||||||| |||||||||||||||||||||  | ||| ||  ||| ||||||||||||||||||| ||||||| |||||||||| |||||| ||||  |    
T  33279976 atagggctgacaatgaaccgaaccaactcgattaaagttcgtaatttgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaatat 33280075  T
Q  598 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    ||| ||||||||||| |||| || ||| |||| ||||||||||||| || | ||| |||||||||||||||    
T  33280076 gagcttaaaattaagttcgtcaactaattgagctgaacttgaactatatgtagttagactcgtttggttca 33280146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 3308074 - 3307902
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||||||||||||||||||||||||| |||||| ||  | ||||||||| |||| | |||| ||||||  |||||||||| |||||| ||||||||    
T  3308074 tagggctggcaatgaaccgaaccaactcgacaatagttcggaactcgattcgacaattaactcgtagaacttagttcatgaaccaaatgagccgaacttg 3307975  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    ||   ||||||||| ||||||||||||||||  |||||||| ||  |||| |||||||||| |||||| ||||    
T  3307974 agcagaaaattaagttcgttaaataaatgagccgaacttgagctgtatatagttcgactcgattggtttatga 3307902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 505 - 671
Target Start/End: Complemental strand, 11161706 - 11161540
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    |||||||||||| |||||||| ||  ||||| ||| |||||| |||||| || || ||||||||||| ||||||||||||| |||  | ||||||| | |    
T  11161706 tggcaatgaaccaaaccaacttgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctga 11161607  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||||||| ||||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||||    
T  11161606 aaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 11161540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 507 - 600
Target Start/End: Complemental strand, 43384926 - 43384833
Alignment:
Q  507 gcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgag 600  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| |||||||||| ||||||| |||||||||    
T  43384926 gcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattaattcgttgaagttggttcatgaaccaaatgagttgaacttgag 43384833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 507 - 668
Target Start/End: Complemental strand, 34516270 - 34516109
Alignment:
Q  507 gcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaa 606  Q
    |||||||||||||||||||| |  | ||| ||  |||| |||||| ||||||||| ||||||||||||||| |||| |||||| |||||||||| | |||    
T  34516270 gcaatgaaccgaaccaactcaattaaagttcgtaattcaattcgacaattgattcattgaacttgattcatcaaccaaatgagccgaacttgagctgaaa 34516171  T
Q  607 attaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |||||| ||||  | ||| |||| ||||||||||||| || | |||||||||||||||||||    
T  34516170 attaagttcgtcgattaattgagctgaacttgaactatatgtagttcgactcgtttggttca 34516109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 499 - 599
Target Start/End: Complemental strand, 39478190 - 39478090
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||| ||| ||||| |||||||||| ||||||| |||||||    
T  39478190 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatactcgattcgataattggttcattggacttggttcatgaaccaaatgagttgaacttg 39478091  T
Q  599 a 599  Q
    |    
T  39478090 a 39478090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 509 - 639
Target Start/End: Original strand, 27189092 - 27189222
Alignment:
Q  509 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaat 608  Q
    ||||||||||| ||||||||  | ||| ||  ||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| | |||||    
T  27189092 aatgaaccgaatcaactcgattagagttcgtaattagattcgataattgattcgtcgaacttggttcatgaaccaaatgagtcgaacttgagctgaaaat 27189191  T
Q  609 taagctcgttaaataaatgagttgaacttga 639  Q
    |||| |||| || ||| ||||||||||||||    
T  27189192 taagttcgtcaactaattgagttgaacttga 27189222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 600
Target Start/End: Complemental strand, 12378492 - 12378391
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| || ||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||| ||||||| |||||||    
T  12378492 tagggttgacaatgaaccgaacaaactcaaaaatagtccgagattcggttcgataattgattcgttgaacttggttcacgaaccaaatgagttgaacttg 12378393  T
Q  599 ag 600  Q
    ||    
T  12378392 ag 12378391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 496 - 673
Target Start/End: Complemental strand, 34655178 - 34655001
Alignment:
Q  496 aaatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaac 595  Q
    |||||||||||||||||||||||  ||||||||| | ||| ||  | |||| ||| |||||  || |||||||||  |||||||||| || |||||||||    
T  34655178 aaatagggctggcaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagtttgttgaacttagttcatgaaccaaacgagtcgaac 34655079  T
Q  596 ttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    ||||| | || |||||| | ||||| |||||||||| |||||||  || |||| ||||||||||||||||||| ||||    
T  34655078 ttgagctaaagattaagtttgttaactaaatgagttaaacttgagttatatatagttcgactcgtttggttcacgaac 34655001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 673
Target Start/End: Complemental strand, 43967650 - 43967476
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||  ||||| ||| | ||| ||  | |||| ||  |||||  ||||||||| ||| |||||||||| || ||| ||||||||    
T  43967650 tagggctggcaatgaaccgatacaacttgaacaaagttcggaactcgactcagtaattagttcgttgaatttggttcatgaaccaaacgagccgaacttg 43967551  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
    || | || |||||| ||||||| ||||||||||||||||||  || |||| ||||||||||||||||||| ||||    
T  43967550 agctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactcgtttggttcacgaac 43967476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 543 - 662
Target Start/End: Complemental strand, 23181251 - 23181132
Alignment:
Q  543 tcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaact 642  Q
    ||||||||| ||||||||||| ||| ||| |||||||||| |||||| |||||||||  | ||||||||| |||| || ||| |||| ||||||||||||    
T  23181251 tcgattcgacaattgattcgtcgaatttggttcatgaaccaaatgagccgaacttgaactgaaaattaagttcgtaaactaattgagctgaacttgaact 23181152  T
Q  643 aaatatggttcgactcgttt 662  Q
    | || | |||||||||||||    
T  23181151 agatgtagttcgactcgttt 23181132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 9412524 - 9412696
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  |||||  |    |||| |||| |||  | |||||||||||| |||||||||| ||||||  |||||||    
T  9412524 tagggctggcaatgaaccgaaccaactcgattatagtttggagctcgactcgacaatgaactcgttgaacttggttcatgaaccaaatgagctgaacttg 9412623  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||| | ||||||  |||||| ||||||||| |||| ||||  || ||||  ||||||||||||  |||||||    
T  9412624 agttgagaattaaattcgttacataaatgagctgaatttgagttatatataattcgactcgtttaattcatga 9412696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 677
Target Start/End: Complemental strand, 39478106 - 39478052
Alignment:
Q  623 aaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagc 677  Q
    ||||||||||||||||||||   |||||||||||||||||| |||||||| ||||    
T  39478106 aaatgagttgaacttgaacttggtatggttcgactcgtttgattcatgaaacagc 39478052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 623 - 681
Target Start/End: Complemental strand, 12378408 - 12378350
Alignment:
Q  623 aaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 681  Q
    ||||||||||||||||| |||| |||| |||||||  ||||||| ||||||||| ||||    
T  12378408 aaatgagttgaacttgagctaagtatgattcgacttatttggtttatgaaccagaccga 12378350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 663
Target Start/End: Original strand, 10749310 - 10749383
Alignment:
Q  590 tcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttg 663  Q
    ||||||||||| | ||||||||| |||| || ||| |||| ||||||||| ||| || | ||||||||||||||    
T  10749310 tcgaacttgagctgaaaattaagttcgtcaactaattgagctgaacttgagctatatgtagttcgactcgtttg 10749383  T

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Target: scaffold0063 (Bit Score: 81; Significance: 9e-38; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 507 - 667
Target Start/End: Original strand, 51310 - 51470
Alignment:
Q  507 gcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaa 606  Q
    |||||||||||||| | |||||||||||| ||||||||| |||| ||| | |||||||||||||  ||| |||||| |||||||||||| ||| ||||||    
T  51310 gcaatgaaccgaactagctcgaaaatagttcgagattcggttcggtaaataattcgttgaacttagttcgtgaaccaaatgagtcgaacgtgattttaaa 51409  T
Q  607 attaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttc 667  Q
    |||||||| ||||||||||||||||||||||||| ||  | | ||||||||| ||||||||    
T  51410 attaagcttgttaaataaatgagttgaacttgaattatgtgtagttcgactcatttggttc 51470  T

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Target: scaffold0002 (Bit Score: 81; Significance: 9e-38; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 96420 - 96248
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||| ||| ||||||||||||| | |||||||||||| ||||||||| |||| ||| | |||| |||||||| |||| |||||| |||||||| |||||     
T  96420 taggactgacaatgaaccgaactagctcgaaaatagttcgagattcggttcgttaaataattcattgaacttaattcgtgaaccaaatgagtccaactta 96321  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||  | |  |||||||||||||||||||||    
T  96320 agttcaaaattaagctcgttaaataaatgagttgaacttgagttatgtgtaattcgactcgtttggttcatga 96248  T

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Target: scaffold0223 (Bit Score: 78; Significance: 6e-36; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 499 - 668
Target Start/End: Complemental strand, 14566 - 14397
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||||||||||||| |||||||||| ||| | |||||||| |||||||||| ||||||||| |||||||||| ||||| | |||||||    
T  14566 tagggctgacaatgaaccgaaccaacccgaaaatagttcgaaactcgattcggtaattgattcattgaacttggttcatgaaccaaatgatttgaacttg 14467  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    |||  |||||||||||||| |||||||||||  |||||| |  ||   || |||||||||||||||||||    
T  14466 agtcgaaaattaagctcgtcaaataaatgagccgaactttagttatggatagttcgactcgtttggttca 14397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 671
Target Start/End: Original strand, 7308 - 7480
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||| ||||||||||||||||||| ||||  |  || ||  ||||||||||||||||||||||| ||||||| |||||||||| |||||| ||||||||    
T  7308 taggggtggcaatgaaccgaaccaattcgattagtgttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 7407  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||| ||| ||| |||| ||||||||||| | |||| | ||||||||||||||||||||    
T  7408 agctgaaaattaagttcgctaactaattgagctgaacttgaaccatatataggtcgactcgtttggttcatga 7480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 495 - 673
Target Start/End: Original strand, 775 - 941
Alignment:
Q  495 gaaatagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaa 594  Q
    |||||||||||| |||||||||||||||| |||||||||||  |||| ||||||            ||||||||||| |||||||||| ||||||| |||    
T  775 gaaatagggctgccaatgaaccgaaccaattcgaaaatagtttgagactcgatt------------cgttgaacttggttcatgaaccaaatgagttgaa 862  T
Q  595 cttgagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaac 673  Q
     ||| ||| |||||||||||||||||||||||||||||||||||| |||| |||  |||||||||| ||||||||||||    
T  863 tttgggttgaaaattaagctcgttaaataaatgagttgaacttgagctaagtataattcgactcgtctggttcatgaac 941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 508 - 669
Target Start/End: Complemental strand, 11600 - 11439
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||||||||||||||||||||| |||||   | ||| || ||||||||| ||||||||||||||||||||  ||| |||||| ||||||| || | ||||    
T  11600 caatgaaccgaaccaactcgaacatagtttaaaatttgactcgataattaattcgttgaacttgattcatataccaaatgagccgaacttcagatgaaaa 11501  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    ||||| ||||||| |||||||| |||| |||||||| ||||  |||||||||||||||||||    
T  11500 ttaagttcgttaattaaatgagctgaatttgaactatatataattcgactcgtttggttcat 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 508 - 669
Target Start/End: Complemental strand, 10120 - 9961
Alignment:
Q  508 caatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaa 607  Q
    |||||||||||| ||||||||| |||||   | ||| || |||| |||| |||||||||| |||||||||| ||| |||||| ||||||| || | ||||    
T  10120 caatgaaccgaatcaactcgaatatagtttaaaatttgactcgacaattaattcgttgaatttgattcatgtaccaaatgagccgaacttaagatgaaaa 10021  T
Q  608 ttaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcat 669  Q
    ||||| ||||||| |||||||| |||| ||| |||  ||||  |||||||||||||||||||    
T  10020 ttaagttcgttaattaaatgagctgaatttgtact--atataattcgactcgtttggttcat 9961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 499 - 671
Target Start/End: Complemental strand, 19436 - 19264
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    ||||||||||||||||||||||||||||||  ||||| ||| |||||| ||||||  | || | ||||||||| ||||||||||||| |||  | |||||    
T  19436 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatcctttgaacttggttcatgaacctaacgagctggacttg 19337  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
    || | ||||||||| ||||||| |||||||| ||||||||| ||| ||||  ||||||||||| |||||||||    
T  19336 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatataattcgactcgttaggttcatga 19264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 505 - 671
Target Start/End: Original strand, 124487 - 124653
Alignment:
Q  505 tggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttgagttta 604  Q
    ||||||||||||||||||||||||| ||||| ||| ||| || |||| ||||| | | ||||||||| |||||||||| ||||||||||||||||| | |    
T  124487 tggcaatgaaccgaaccaactcgaatatagttcgaaatttgactcgacaattggtccattgaacttggttcatgaaccaaatgagtcgaacttgagctga 124586  T
Q  605 aaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatga 671  Q
      |||||| | ||||| |||||||| |||| |||||||| | ||  ||||| |||||||||||||||    
T  124587 ttattaagtttgttaattaaatgagctgaatttgaactatagatatttcgattcgtttggttcatga 124653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 668
Target Start/End: Original strand, 26621 - 26790
Alignment:
Q  499 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 598  Q
    |||||||| ||||||| ||||||||||| |  | ||| ||  ||||||||||| || ||||| |||||||||| |||||||| | |||||||||||||||    
T  26621 tagggctgacaatgaatcgaaccaactcaattagagttcgtaattcgattcgacaactgatttgttgaacttggttcatgaatcaaatgagtcgaacttg 26720  T
Q  599 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttca 668  Q
    || | ||||||||| |||| || ||| |||| ||||||| | ||| || | |||||||||||||||||||    
T  26721 agctgaaaattaagttcgtcaactaattgagctgaacttaagctatatgtagttcgactcgtttggttca 26790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 558 - 639
Target Start/End: Original strand, 243 - 324
Alignment:
Q  558 attcgttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttga 639  Q
    |||||||| ||||| |||||||||||||| || |||||||||||| | ||||||| ||||||| ||||||||||||||||||    
T  243 attcgttggacttggttcatgaacctaattagccgaacttgagttaagaattaagttcgttaattaaatgagttgaacttga 324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 563 - 636
Target Start/End: Complemental strand, 17311 - 17238
Alignment:
Q  563 ttgaacttgattcatgaacctaatgagtcgaacttgagtttaaaattaagctcgttaaataaatgagttgaact 636  Q
    |||||||| |||| |||||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  17311 ttgaacttaattcgtgaaccaaatgagtcgagcttgaattcaaaattaagctcgttaaataaatgagttgaact 17238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 498 - 629
Target Start/End: Complemental strand, 11531 - 11400
Alignment:
Q  498 atagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 597  Q
    ||||| ||| ||||||||||||||||||||| ||||||  |  | ||||||||| ||||   |||| ||||||  |||||||||| ||||||  ||||||    
T  11531 ataggactgacaatgaaccgaaccaactcgataatagtttggaactcgattcgacaattacctcgtcgaacttagttcatgaaccaaatgaggtgaactt 11432  T
Q  598 gagtttaaaattaagctcgttaaataaatgag 629  Q
     |||| ||||||||| ||||||||||||||||    
T  11431 aagttaaaaattaagttcgttaaataaatgag 11400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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