View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8226_high_23 (Length: 387)

Name: NF8226_high_23
Description: NF8226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8226_high_23
NF8226_high_23
[»] chr8 (32 HSPs)
chr8 (19-283)||(37468243-37468507)
chr8 (282-336)||(20877071-20877125)
chr8 (283-334)||(1949651-1949702)
chr8 (282-336)||(8106078-8106132)
chr8 (282-336)||(14820620-14820674)
chr8 (282-336)||(21147934-21147988)
chr8 (283-336)||(20875697-20875750)
chr8 (283-336)||(40487740-40487793)
chr8 (284-340)||(18044149-18044205)
chr8 (282-336)||(10108368-10108422)
chr8 (282-336)||(10108696-10108750)
chr8 (282-336)||(38726685-38726739)
chr8 (283-336)||(5554868-5554921)
chr8 (92-185)||(37724157-37724250)
chr8 (284-336)||(43851665-43851717)
chr8 (284-327)||(1950028-1950071)
chr8 (273-336)||(7689849-7689912)
chr8 (284-334)||(14820295-14820345)
chr8 (282-335)||(5555196-5555249)
chr8 (283-336)||(10171469-10171522)
chr8 (283-336)||(17622889-17622942)
chr8 (283-332)||(35367409-35367458)
chr8 (285-336)||(39888482-39888533)
chr8 (282-336)||(21148262-21148316)
chr8 (282-336)||(26136683-26136737)
chr8 (282-336)||(30789833-30789887)
chr8 (119-185)||(37726797-37726863)
chr8 (282-336)||(40486627-40486681)
chr8 (283-336)||(7689523-7689576)
chr8 (280-317)||(28977615-28977652)
chr8 (282-335)||(43481642-43481695)
chr8 (292-336)||(42112993-42113037)
[»] chr7 (31 HSPs)
chr7 (79-188)||(41428240-41428348)
chr7 (284-335)||(23274925-23274976)
chr7 (282-336)||(28218176-28218230)
chr7 (282-336)||(41600284-41600338)
chr7 (283-336)||(14630335-14630388)
chr7 (283-336)||(14646976-14647029)
chr7 (283-336)||(20963819-20963872)
chr7 (283-336)||(28218489-28218542)
chr7 (283-336)||(33131632-33131685)
chr7 (283-335)||(14795549-14795601)
chr7 (283-335)||(15242541-15242593)
chr7 (274-336)||(12006531-12006593)
chr7 (274-336)||(48672605-48672667)
chr7 (283-336)||(23704986-23705039)
chr7 (282-335)||(31852157-31852210)
chr7 (284-336)||(14800982-14801033)
chr7 (284-336)||(15247974-15248025)
chr7 (284-336)||(20419536-20419588)
chr7 (284-336)||(20419863-20419915)
chr7 (284-332)||(23704662-23704710)
chr7 (274-334)||(25772354-25772414)
chr7 (285-336)||(23258250-23258301)
chr7 (284-335)||(38880048-38880099)
chr7 (289-335)||(1250533-1250579)
chr7 (282-336)||(10409699-10409753)
chr7 (282-336)||(33133462-33133516)
chr7 (284-338)||(41599958-41600012)
chr7 (283-336)||(12006866-12006919)
chr7 (284-336)||(6465855-6465907)
chr7 (284-336)||(24195198-24195250)
chr7 (283-335)||(48672276-48672328)
[»] chr3 (36 HSPs)
chr3 (64-205)||(46937450-46937591)
chr3 (283-336)||(3425974-3426027)
chr3 (284-336)||(14162196-14162248)
chr3 (282-336)||(3424772-3424826)
chr3 (282-336)||(9266973-9267027)
chr3 (282-336)||(11003730-11003784)
chr3 (282-336)||(14262034-14262088)
chr3 (282-336)||(14262362-14262416)
chr3 (282-336)||(35741910-35741964)
chr3 (283-336)||(9267300-9267353)
chr3 (283-336)||(14171912-14171965)
chr3 (282-335)||(16721989-16722042)
chr3 (283-336)||(19112763-19112816)
chr3 (284-336)||(35740817-35740869)
chr3 (285-324)||(1067715-1067754)
chr3 (67-134)||(8325373-8325440)
chr3 (284-330)||(5800936-5800982)
chr3 (282-336)||(30500041-30500095)
chr3 (282-336)||(30500366-30500420)
chr3 (282-336)||(45969913-45969967)
chr3 (287-336)||(27946112-27946161)
chr3 (283-336)||(27946191-27946244)
chr3 (283-336)||(35995677-35995730)
chr3 (283-336)||(36990985-36991038)
chr3 (283-336)||(37016425-37016478)
chr3 (280-332)||(17465697-17465749)
chr3 (284-336)||(19720333-19720385)
chr3 (283-335)||(49986526-49986578)
chr3 (279-334)||(32998460-32998515)
chr3 (282-332)||(20853693-20853743)
chr3 (282-336)||(35996001-35996055)
chr3 (282-336)||(45970242-45970296)
chr3 (283-336)||(16722317-16722370)
chr3 (283-336)||(20854021-20854074)
chr3 (284-336)||(5800605-5800657)
chr3 (284-336)||(19113091-19113143)
[»] chr4 (31 HSPs)
chr4 (124-202)||(52392024-52392102)
chr4 (64-185)||(20390640-20390761)
chr4 (280-336)||(53896442-53896498)
chr4 (282-336)||(36887678-36887732)
chr4 (283-336)||(31218307-31218360)
chr4 (289-336)||(3018016-3018063)
chr4 (282-336)||(9619305-9619359)
chr4 (284-334)||(15640716-15640766)
chr4 (282-332)||(18667620-18667670)
chr4 (282-336)||(41946963-41947017)
chr4 (283-325)||(50462733-50462775)
chr4 (294-336)||(51029099-51029141)
chr4 (282-335)||(31944277-31944330)
chr4 (287-332)||(48580196-48580241)
chr4 (284-336)||(43313537-43313589)
chr4 (289-336)||(9516615-9516662)
chr4 (289-336)||(9618985-9619032)
chr4 (289-332)||(15641046-15641089)
chr4 (282-336)||(36889004-36889058)
chr4 (286-324)||(37012709-37012747)
chr4 (282-336)||(37013032-37013086)
chr4 (282-336)||(46046750-46046803)
chr4 (282-332)||(48259821-48259871)
chr4 (283-336)||(3018336-3018389)
chr4 (283-336)||(3273620-3273673)
chr4 (283-336)||(9397024-9397077)
chr4 (283-336)||(46046429-46046482)
chr4 (283-336)||(46934070-46934123)
chr4 (282-323)||(46935178-46935219)
chr4 (294-334)||(31943959-31943999)
chr4 (284-336)||(41947180-41947232)
[»] chr6 (16 HSPs)
chr6 (68-192)||(15923090-15923215)
chr6 (283-336)||(24731934-24731987)
chr6 (284-336)||(9481182-9481234)
chr6 (284-336)||(21069514-21069566)
chr6 (283-335)||(21070864-21070916)
chr6 (282-336)||(32017829-32017883)
chr6 (92-185)||(7522315-7522408)
chr6 (283-336)||(18500655-18500708)
chr6 (284-336)||(15941303-15941355)
chr6 (284-340)||(26385278-26385334)
chr6 (289-336)||(10321738-10321785)
chr6 (289-336)||(26385600-26385647)
chr6 (282-336)||(18500313-18500367)
chr6 (286-336)||(34113591-34113641)
chr6 (282-335)||(9854212-9854265)
chr6 (289-337)||(19284134-19284182)
[»] chr2 (28 HSPs)
chr2 (282-340)||(30959993-30960051)
chr2 (282-336)||(12419048-12419102)
chr2 (282-336)||(12431108-12431162)
chr2 (273-331)||(23046696-23046754)
chr2 (282-336)||(19251469-19251523)
chr2 (283-336)||(19251795-19251848)
chr2 (284-336)||(23854688-23854740)
chr2 (284-336)||(30958684-30958736)
chr2 (284-336)||(42670717-42670769)
chr2 (289-336)||(26560881-26560928)
chr2 (283-333)||(13284411-13284461)
chr2 (282-336)||(17463417-17463471)
chr2 (282-332)||(33290377-33290427)
chr2 (282-335)||(17850913-17850966)
chr2 (282-335)||(22263520-22263573)
chr2 (283-336)||(26236126-26236179)
chr2 (283-336)||(26236420-26236473)
chr2 (283-336)||(39878102-39878154)
chr2 (284-336)||(13284739-13284791)
chr2 (284-336)||(17850587-17850639)
chr2 (283-331)||(23047913-23047961)
chr2 (284-336)||(23806278-23806330)
chr2 (284-336)||(26136143-26136195)
chr2 (285-336)||(21481002-21481053)
chr2 (284-331)||(23855025-23855072)
chr2 (289-335)||(13254763-13254809)
chr2 (283-336)||(20498746-20498799)
chr2 (283-336)||(33290048-33290101)
[»] chr1 (26 HSPs)
chr1 (282-336)||(17606632-17606686)
chr1 (282-336)||(33629016-33629070)
chr1 (282-336)||(37236716-37236770)
chr1 (283-336)||(27039637-27039690)
chr1 (284-336)||(17502055-17502107)
chr1 (285-336)||(42510341-42510392)
chr1 (282-336)||(18462284-18462338)
chr1 (87-185)||(34939720-34939818)
chr1 (278-336)||(39711398-39711456)
chr1 (283-335)||(17500768-17500820)
chr1 (282-340)||(20995989-20996047)
chr1 (284-334)||(52058011-52058061)
chr1 (283-336)||(33628689-33628742)
chr1 (283-336)||(43400752-43400805)
chr1 (283-336)||(48072287-48072340)
chr1 (283-335)||(29696564-29696616)
chr1 (284-336)||(39711074-39711125)
chr1 (284-336)||(39826372-39826424)
chr1 (282-334)||(43539675-43539727)
chr1 (289-336)||(17606309-17606356)
chr1 (283-336)||(20995697-20995750)
chr1 (282-335)||(29696884-29696937)
chr1 (271-334)||(16294038-16294099)
chr1 (284-336)||(18342343-18342395)
chr1 (284-336)||(39970972-39971024)
chr1 (282-334)||(52058336-52058388)
[»] chr5 (26 HSPs)
chr5 (282-335)||(28071825-28071878)
chr5 (283-330)||(41424515-41424562)
chr5 (282-336)||(6817121-6817175)
chr5 (282-336)||(14143900-14143954)
chr5 (282-336)||(17762281-17762335)
chr5 (283-336)||(14411696-14411749)
chr5 (283-340)||(24651021-24651078)
chr5 (284-336)||(23979227-23979279)
chr5 (288-336)||(27159280-27159328)
chr5 (277-336)||(29445131-29445190)
chr5 (283-336)||(24074302-24074355)
chr5 (283-336)||(24837168-24837221)
chr5 (282-335)||(27158989-27159042)
chr5 (283-335)||(7126244-7126296)
chr5 (284-336)||(24837495-24837547)
chr5 (277-336)||(28070459-28070518)
chr5 (289-336)||(31799965-31800012)
chr5 (289-336)||(41001678-41001725)
chr5 (282-336)||(20709537-20709591)
chr5 (282-336)||(22571075-22571129)
chr5 (287-336)||(7125921-7125970)
chr5 (283-336)||(14144227-14144280)
chr5 (283-336)||(17762608-17762661)
chr5 (283-324)||(41425790-41425831)
chr5 (284-336)||(18336782-18336833)
chr5 (284-336)||(31799640-31799692)
[»] scaffold0361 (2 HSPs)
scaffold0361 (280-336)||(4558-4614)
scaffold0361 (283-332)||(4892-4941)
[»] scaffold0117 (1 HSPs)
scaffold0117 (287-336)||(12308-12357)
[»] scaffold0449 (2 HSPs)
scaffold0449 (282-336)||(7526-7580)
scaffold0449 (289-334)||(7231-7276)
[»] scaffold0477 (1 HSPs)
scaffold0477 (283-340)||(4879-4936)
[»] scaffold0352 (2 HSPs)
scaffold0352 (283-336)||(6005-6058)
scaffold0352 (283-336)||(4666-4719)
[»] scaffold0185 (1 HSPs)
scaffold0185 (283-336)||(3868-3921)
[»] scaffold0141 (1 HSPs)
scaffold0141 (283-336)||(8324-8377)
[»] scaffold0176 (1 HSPs)
scaffold0176 (283-335)||(15955-16007)
[»] scaffold0586 (1 HSPs)
scaffold0586 (284-323)||(5873-5912)
[»] scaffold0809 (1 HSPs)
scaffold0809 (283-336)||(1732-1785)


Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 283
Target Start/End: Complemental strand, 37468507 - 37468243
Alignment:
Q  19 agagaatgtcctacgaatatcagtacacaatcgatacaaagaaatatgcttaagccagcgaaaaatatcataacgagaacatcacgaaggcgtattactg 118  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37468507 agagaatgtcctacgaatatcaatacacaattgatacaaagaaatatgcttaagccagcgaaaaatatcataacgagaacatcacgaaggcgtattactg 37468408  T
Q  119 ctatgcaattgaaattccactaccccaccatcccattttttccggccagcatgtgatgtgattggttgcacggcggttcaggacgagatggcnnnnnnnn 218  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||            
T  37468407 ctatgcaattgaaattccattaccccaccatcccattttttccggccagcatgtgatgtgattggttgcacagcagttcaggacgagatggcgaaaaaaa 37468308  T
Q  219 gcctcacgatacatagcaattttgttgatacaaatatgaaaaatttaacatgtctataatttcaa 283  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37468307 gcctcgcgataaatagcaatgttgttgatacaaatatgaaaaatttaacatgtctataatttcaa 37468243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 20877125 - 20877071
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20877125 aagggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtcc 20877071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 1949651 - 1949702
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  1949651 agggttaatacctcttttggtccctgtaatatgatcgaattccggttttagt 1949702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 8106132 - 8106078
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||    
T  8106132 aagggttaatacctcttttggtcattgcaatatgagcgaattccagttttagtcc 8106078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 14820674 - 14820620
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  14820674 aagggttaatacctcttttagtccctgtaatattagcgaattccggttttagtcc 14820620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 21147934 - 21147988
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  21147934 aagggttaatacctctttttgtccctgtaatattagcgaattccggttttagtcc 21147988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 20875697 - 20875750
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  20875697 agggttaatacctcttttggtccctgtaatatgagcaaatttcggttttagtcc 20875750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 40487793 - 40487740
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  40487793 agggttaataccacttttggtccttgtaatattagcgaattccagttttagtcc 40487740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 18044205 - 18044149
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtccatgt 340  Q
    |||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccatgt 18044149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 10108368 - 10108422
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  10108368 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 10108422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 10108750 - 10108696
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||||| |||| |||||||| ||| |||||||||||||||||    
T  10108750 aagggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtcc 10108696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 38726685 - 38726739
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||  ||||||||| |||||||||||| |||||||||||||||||    
T  38726685 aagggttaataccctttttggtccctgtaatatgagcaaattccggttttagtcc 38726739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 5554868 - 5554921
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  5554868 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 5554921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 37724250 - 37724157
Alignment:
Q  92 cgagaacatcacgaaggcgtattactgctatgcaattgaaattccactaccccaccatcccattttttccggccagcatgtgatgtgattggtt 185  Q
    |||||||||| |||| |  | |||| ||||| |||||||||||||| ||| |||| ||| | |||| ||||||||||||| |||||||||||||    
T  37724250 cgagaacatcccgaaaggattttaccgctatacaattgaaattccattacaccactatctcgttttatccggccagcatgagatgtgattggtt 37724157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 43851665 - 43851717
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  43851665 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 43851717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 1950071 - 1950028
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccgg 327  Q
    |||||||| ||||||||||||| |||||||||||||||||||||    
T  1950071 gggttaatgcctcttttggtccctgtaatatgagcgaattccgg 1950028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 7689912 - 7689849
Alignment:
Q  273 tataatttcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| || |||||| |||||||||||| |||| |||||||| ||||||||||| |||||||||    
T  7689912 tataaattaaagggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtcc 7689849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 14820295 - 14820345
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    |||| |||||||||||| |||| |||||||| |||||||||||||||||||    
T  14820295 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagt 14820345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 5555249 - 5555196
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||||||| ||||||||| |||| |||||||| |||||||| |||||||||||    
T  5555249 aagggttaacacctcttttcgtccctgtaatattagcgaatttcggttttagtc 5555196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 10171522 - 10171469
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||| ||||| |||| |||||||| |||||||||||||||||||||    
T  10171522 agggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtcc 10171469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 17622889 - 17622942
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| ||||||||||||| |||||||| | ||||||||||    
T  17622889 agggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtcc 17622942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 35367409 - 35367458
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggtttta 332  Q
    ||||| ||||||||||||||||| || ||||| |||||||||||||||||    
T  35367409 agggtaaatacctcttttggtccctgcaatattagcgaattccggtttta 35367458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 336
Target Start/End: Original strand, 39888482 - 39888533
Alignment:
Q  285 ggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||||||| | |||||| |||||| | ||||||||||||    
T  39888482 ggttaatacctcttttggtccctataatataagcgaaattcggttttagtcc 39888533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 21148316 - 21148262
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||  |||||||| || ||||||||||||||||||    
T  21148316 aagggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtcc 21148262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 26136683 - 26136737
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| || | |||||||| |||||||||| ||||||||||    
T  26136683 aagggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtcc 26136737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 30789887 - 30789833
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| ||  |||||||||||||||||    
T  30789887 aagggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtcc 30789833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 37726797 - 37726863
Alignment:
Q  119 ctatgcaattgaaattccactaccccaccatcccattttttccggccagcatgtgatgtgattggtt 185  Q
    |||| |||||||||||||| ||| |||| ||| | |||| ||| ||||||||| |||||||||||||    
T  37726797 ctatacaattgaaattccattacaccactatctcgttttatccagccagcatgagatgtgattggtt 37726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 40486627 - 40486681
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||  |||||||||| |||||||| | ||||||||| |||||||||    
T  40486627 aagggttaatactacttttggtccctgtaatattaacgaattccgattttagtcc 40486681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 7689523 - 7689576
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||| ||| ||||||||    
T  7689523 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtcc 7689576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 28977615 - 28977652
Alignment:
Q  280 tcaagggttaatacctcttttggtccttgtaatatgag 317  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  28977615 tcaagggttaataccccttttggtccctgtaatatgag 28977652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 43481695 - 43481642
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    |||||| |||| ||||||| |||  |||||||| ||||||||||||||||||||    
T  43481695 aagggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtc 43481642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 42112993 - 42113037
Alignment:
Q  292 acctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||| |||| |||||||| ||||||||||| |||||||||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtcc 42113037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 188
Target Start/End: Original strand, 41428240 - 41428348
Alignment:
Q  79 aaaaatatcataacgagaacatcacgaaggcgtattactgctatgcaattgaaattccactaccccaccatcccattttttccggccagcatgtgatgtg 178  Q
    |||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||||||||||||||  || ||||||||||||| ||||| |||||    
T  41428240 aaaaatatcataacgagaacatcacgaaggggtattattgttatg-aattgaaattccactaccccaccaatccgttttttccggccaacatgttatgtg 41428338  T
Q  179 attggttgca 188  Q
    ||||||||||    
T  41428339 attggttgca 41428348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 335
Target Start/End: Original strand, 23274925 - 23274976
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||||||||| |||||||||||||||||||||||||||| || ||||||||    
T  23274925 gggttaataccccttttggtccttgtaatatgagcgaatttcgattttagtc 23274976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 28218176 - 28218230
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  28218176 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 28218230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 41600338 - 41600284
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  41600338 aagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtcc 41600284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 14630335 - 14630388
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||  |||| || ||||||||||||||||||||||||||||||||    
T  14630335 agggttaataccctttttagttcttgtaatatgagcgaattccggttttagtcc 14630388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 14647029 - 14646976
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||  |||| |||| ||||||||||||||||||||||||||||||    
T  14647029 agggttaataccctttttagtccctgtaatatgagcgaattccggttttagtcc 14646976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 20963872 - 20963819
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  20963872 agggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtcc 20963819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 28218542 - 28218489
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  28218542 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 28218489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 33131632 - 33131685
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||| | |||||||| |||||||||||||| |||||||||||||||    
T  33131632 agggttaataccccctttggtccctgtaatatgagcgatttccggttttagtcc 33131685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 14795549 - 14795601
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||||||||||  |||| |||||||||||||||||||||||| |||||||||    
T  14795549 agggttaataccctttttagtccttgtaatatgagcgaattccagttttagtc 14795601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 15242541 - 15242593
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||||||||||  |||| |||||||||||||||||||||||| |||||||||    
T  15242541 agggttaataccctttttagtccttgtaatatgagcgaattccagttttagtc 15242593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 12006531 - 12006593
Alignment:
Q  274 ataatttcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||  ||||| |||||||||||| |||| |||||||| ||||||||||| |||||||||    
T  12006531 ataatttttagggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtcc 12006593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 336
Target Start/End: Complemental strand, 48672667 - 48672605
Alignment:
Q  274 ataatttcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||| ||||| |||||||||||| |||  |||||||| |||||||| ||||||||||||    
T  48672667 ataatttctagggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtcc 48672605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 23705039 - 23704986
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||  |||||||| |||||||||||||||||||||    
T  23705039 agggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtcc 23704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 31852210 - 31852157
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||||||||||||||||| |||| |||||||| | |||||| |||||||||||    
T  31852210 aagggttaatacctcttttcgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 14801033 - 14800982
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||| ||||| |||| |||||||||||||||| ||||||||||||    
T  14801033 gggttaataccttttttgttcct-gtaatatgagcgaatttcggttttagtcc 14800982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 15248025 - 15247974
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||| ||||| |||| |||||||||||||||| ||||||||||||    
T  15248025 gggttaataccttttttgttcct-gtaatatgagcgaatttcggttttagtcc 15247974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 20419536 - 20419588
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| | |||||| |||||||||||||||||||||    
T  20419536 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtcc 20419588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 20419915 - 20419863
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| | |||||||||||||||||||    
T  20419915 gggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtcc 20419863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 23704662 - 23704710
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggtttta 332  Q
    |||| |||||||||||| |||| |||||||| |||||||||||||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggtttta 23704710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 25772354 - 25772414
Alignment:
Q  274 ataatttcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    ||||||| |||||| |||||||||||| |||| |||||||| |||||||| || |||||||    
T  25772354 ataattttaagggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagt 25772414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 336
Target Start/End: Complemental strand, 23258301 - 23258250
Alignment:
Q  285 ggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||| |||||||||||  |||||||| |||||||||||||||| ||||    
T  23258301 ggttaatatctcttttggtctctgtaatattagcgaattccggttttggtcc 23258250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 335
Target Start/End: Complemental strand, 38880099 - 38880048
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    |||| |||||||||||| |||| |||||||| ||| ||||||||||||||||    
T  38880099 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc 38880048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 1250579 - 1250533
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    |||| ||||||| ||||||||||||| |||||||||| |||||||||    
T  1250579 aatatctcttttcgtccttgtaatattagcgaattccagttttagtc 1250533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 10409753 - 10409699
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| ||||||||||||  ||| |||||||| ||||||||||| |||||||||    
T  10409753 aagggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtcc 10409699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 33133516 - 33133462
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||  ||||||||||| ||||||| ||| ||| ||||||||||||||    
T  33133516 aagggttaatatatcttttggtccctgtaatacgagtgaaatccggttttagtcc 33133462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 41599958 - 41600012
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtccat 338  Q
    |||| ||||||||||||  ||| |||||||| |||||||| ||||||||||||||    
T  41599958 gggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccat 41600012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 12006919 - 12006866
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| || | |||||||| ||||||||||| |||||||||    
T  12006919 agggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtcc 12006866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 6465855 - 6465907
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||| || |||| |||| |||||||| |||||||||||||||||||||    
T  6465855 gggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtcc 6465907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 24195250 - 24195198
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| ||||||||| | |||||||||    
T  24195250 gggtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 48672276 - 48672328
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||| |||||||||||| |||| |||||||| || ||||| |||||||||||    
T  48672276 agggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtc 48672328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 46937591 - 46937450
Alignment:
Q  64 atgcttaagccagcgaaaaatatcataacgagaacatcacgaaggcgtattactgctatgcaattgaaattccactaccccaccatcccattttttccgg 163  Q
    |||||||| | ||||| |||||| | ||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||||| ||   ||||||||||    
T  46937591 atgcttaatcaagcgagaaatattacaacgacaacatcacgaaggcttattactgttatacaattgaaattccactaccccaccttcaagttttttccgg 46937492  T
Q  164 ccagcatgtgatgtgattggttgcacggcggttcaggacgag 205  Q
    |||||||| ||||||||| | |  ||||| ||||||||||||    
T  46937491 ccagcatgagatgtgattagctctacggcagttcaggacgag 46937450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 3426027 - 3425974
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  3426027 agggttaatacctcttttggcccctgtaatattagcgaattccggttttagtcc 3425974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 14162248 - 14162196
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  14162248 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtcc 14162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 3424772 - 3424826
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||    
T  3424772 aagggttaatacctcttttggtccctgtaatattagcgatttccggttttggtcc 3424826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 9266973 - 9267027
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  9266973 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 9267027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 11003730 - 11003784
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| ||||||||||||| | |||||||||||||||||||    
T  11003730 aagggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtcc 11003784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 14262034 - 14262088
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||    
T  14262034 aagggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtcc 14262088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 14262416 - 14262362
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  14262416 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 14262362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 35741964 - 35741910
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||| |||||||||| |||||||| |||||||||| ||||||||||    
T  35741964 aagggttaataccacttttggtccctgtaatattagcgaattccagttttagtcc 35741910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 9267353 - 9267300
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  9267353 agggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtcc 9267300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 14171965 - 14171912
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  14171965 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 14171912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 16721989 - 16722042
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    |||||| |||||||||||| |||| |||||||| ||||||||||||||||||||    
T  16721989 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 16722042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 19112763 - 19112816
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  19112763 agggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtcc 19112816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 35740817 - 35740869
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||  |||||||||| |||||||| |||||||||||||||||||||    
T  35740817 gggttaatactacttttggtccctgtaatattagcgaattccggttttagtcc 35740869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 1067715 - 1067754
Alignment:
Q  285 ggttaatacctcttttggtccttgtaatatgagcgaattc 324  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  1067715 ggttaatacctcttttggtccttgtaatatcagcgaattc 1067754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 8325373 - 8325440
Alignment:
Q  67 cttaagccagcgaaaaatatcataacgagaacatcacgaaggcgtattactgctatgcaattgaaatt 134  Q
    |||||||||  ||||||||||||||| | || ||||| ||||||||||| |||||||||||| |||||    
T  8325373 cttaagccaatgaaaaatatcataacaaaaatatcaccaaggcgtattattgctatgcaattaaaatt 8325440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 330
Target Start/End: Complemental strand, 5800982 - 5800936
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttt 330  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||    
T  5800982 gggttaatacctcttttcgtccctgtaatattagcgaattccggttt 5800936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 30500041 - 30500095
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||||||||  ||| |||||||| |||||||| ||||||||||||    
T  30500041 aagggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtcc 30500095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 30500420 - 30500366
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  30500420 aagggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtcc 30500366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 45969913 - 45969967
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| || ||||||||||||||||||    
T  45969913 aagggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtcc 45969967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 27946112 - 27946161
Alignment:
Q  287 ttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  27946112 ttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 27946161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 27946244 - 27946191
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| ||||  ||||||| |||||||||||||||||||||    
T  27946244 agggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtcc 27946191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 35995677 - 35995730
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| || | |||||||| |||||||||||||||||||||    
T  35995677 agggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtcc 35995730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 36991038 - 36990985
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||  |||||||||| |||||||| |||||||| ||||||||||||    
T  36991038 agggttaatactacttttggtccctgtaatattagcgaatttcggttttagtcc 36990985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 37016478 - 37016425
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||  |||||||||| |||||||| |||||||| ||||||||||||    
T  37016478 agggttaatactacttttggtccctgtaatattagcgaatttcggttttagtcc 37016425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 17465749 - 17465697
Alignment:
Q  280 tcaagggttaatacctcttttggtccttgtaatatgagcgaattccggtttta 332  Q
    |||||||| |||||||||||| ||||||||||||| |||||||| | ||||||    
T  17465749 tcaagggtaaatacctcttttcgtccttgtaatattagcgaatttcagtttta 17465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 19720333 - 19720385
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||| ||||||| |||| |||||||| |||||||||||||||||||||    
T  19720333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtcc 19720385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 49986526 - 49986578
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||| |||||||||||| |||| |||||||| || |||||||||||||||||    
T  49986526 agggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtc 49986578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 334
Target Start/End: Complemental strand, 32998515 - 32998460
Alignment:
Q  279 ttcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    ||||||||||||||||  ||||||||| |||||||| ||||||||| ||| |||||    
T  32998515 ttcaagggttaataccatttttggtccctgtaatattagcgaattctggtgttagt 32998460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 20853693 - 20853743
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggtttta 332  Q
    |||||| |||||||||||| |||| |||||||| |||||||| ||||||||    
T  20853693 aagggtaaatacctcttttcgtccctgtaatattagcgaatttcggtttta 20853743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 35996055 - 35996001
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| ||||| |||||| |||| |||||||| ||||||||||| |||||||||    
T  35996055 aagggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtcc 35996001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 45970296 - 45970242
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| || ||||| ||||||||||||    
T  45970296 aagggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtcc 45970242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 16722370 - 16722317
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||| | ||||||||||    
T  16722370 agggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtcc 16722317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 20854074 - 20854021
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||| ||||||| |||| |||||||| |||||||| ||||||||||||    
T  20854074 agggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtcc 20854021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 5800605 - 5800657
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| | |||||| ||||||||||||    
T  5800605 gggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtcc 5800657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 19113143 - 19113091
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| | |||||| | |||||||||||||||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtcc 19113091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 7e-25; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 52392102 - 52392024
Alignment:
Q  124 caattgaaattccactaccccaccatcccattttttccggccagcatgtgatgtgattggttgcacggcggttcaggac 202  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| | |||||||    
T  52392102 caattgaaattccactatcccaccatcccgttttttccggccagcatgtgatgttattggttgcacggcagctcaggac 52392024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 20390640 - 20390761
Alignment:
Q  64 atgcttaagccagcgaaaaatatcataacgagaacatcacgaaggcgtattactgctatgcaattgaaattccactaccccaccatcccattttttccgg 163  Q
    |||||||||||||| | ||| |  ||||| |||| |||||||| |  | |||| ||||| |||||||||||||| |||||||| ||||| |||||||||     
T  20390640 atgcttaagccagcaagaaacagtataacaagaatatcacgaaagaattttaccgctatacaattgaaattccattaccccactatcccgttttttccga 20390739  T
Q  164 ccagcatgtgatgtgattggtt 185  Q
    ||| |||| |||||||||||||    
T  20390740 ccaacatgagatgtgattggtt 20390761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 53896442 - 53896498
Alignment:
Q  280 tcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  53896442 tcaagggttaatacctcttttgatcgctgtaatatgagcgaattccggttttagtcc 53896498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 36887678 - 36887732
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||||||||||||| |||||||| ||||||||  |||||||||||    
T  36887678 aagggttaatacctcttttggtccctgtaatattagcgaattttggttttagtcc 36887732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 31218360 - 31218307
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  31218360 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 31218307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 3018016 - 3018063
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  3018016 aatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 3018063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 9619359 - 9619305
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||    
T  9619359 aagggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtcc 9619305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 15640716 - 15640766
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    ||||||| ||||||||| |||| |||||||| |||||||||||||||||||    
T  15640716 gggttaacacctcttttcgtccctgtaatattagcgaattccggttttagt 15640766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 18667670 - 18667620
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggtttta 332  Q
    ||||||||||||||||||| |||| |||||||| |||||||||| ||||||    
T  18667670 aagggttaatacctcttttcgtccctgtaatattagcgaattccagtttta 18667620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 41946963 - 41947017
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| || ||||||||||||||||||    
T  41946963 aagggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtcc 41947017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 325
Target Start/End: Complemental strand, 50462775 - 50462733
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattcc 325  Q
    ||||||||||||||||||||||| |||||||| ||||||||||    
T  50462775 agggttaatacctcttttggtccctgtaatattagcgaattcc 50462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 51029141 - 51029099
Alignment:
Q  294 ctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  51029141 ctcttttggtccctgtaatatgagcgaatttcggttttagtcc 51029099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 31944330 - 31944277
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    |||||| ||||| |||||| ||||||||||||| |||||||| |||||||||||    
T  31944330 aagggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtc 31944277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 48580241 - 48580196
Alignment:
Q  287 ttaatacctcttttggtccttgtaatatgagcgaattccggtttta 332  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||    
T  48580241 ttaatacctcttttcgtccctgtaatattagcgaattccggtttta 48580196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 43313589 - 43313537
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||| |||||||||  |||||||| ||||||||| |||||||||||    
T  43313589 gggttaataccacttttggtctctgtaatattagcgaattctggttttagtcc 43313537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 9516615 - 9516662
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| ||||||| |||| |||||||| |||||||||||||||||||||    
T  9516615 aatatctcttttcgtccctgtaatattagcgaattccggttttagtcc 9516662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 9618985 - 9619032
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||| |||| |||| |||||||| |||||||||||||||||||||    
T  9618985 aatacctattttcgtccatgtaatattagcgaattccggttttagtcc 9619032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 332
Target Start/End: Complemental strand, 15641089 - 15641046
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggtttta 332  Q
    |||||||||||| ||||||||||||| || ||||||||||||||    
T  15641089 aatacctcttttcgtccttgtaatattagtgaattccggtttta 15641046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 36889058 - 36889004
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||| |||||||||| | |||||| ||||||||  |||||||||||    
T  36889058 aagggttaataccacttttggtccctataatattagcgaattttggttttagtcc 36889004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 37012709 - 37012747
Alignment:
Q  286 gttaatacctcttttggtccttgtaatatgagcgaattc 324  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  37012709 gttaatacctcttttcgtccttgtaatattagcgaattc 37012747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 37013086 - 37013032
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||| ||| |||| |||||||| ||||||||| |||||||||||    
T  37013086 aagggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtcc 37013032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 46046803 - 46046750
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| ||||||| |||| |||| |||||||| |||||||||||||||||||||    
T  46046803 aagggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtcc 46046750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 48259821 - 48259871
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggtttta 332  Q
    |||||| |||| ||||||| |||| |||||||| |||||||||||||||||    
T  48259821 aagggtaaatatctcttttcgtccctgtaatattagcgaattccggtttta 48259871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 3018389 - 3018336
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||| ||||||| |||| |||||||| | |||||| ||||||||||||    
T  3018389 agggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtcc 3018336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 3273620 - 3273673
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||| ||||||| |||| |||||||| ||||||||||| |||||||||    
T  3273620 agggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtcc 3273673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 9397077 - 9397024
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| ||||| |||||| |||| |||||||| ||| |||||||||||||||||    
T  9397077 agggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtcc 9397024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 46046429 - 46046482
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| ||||||| |||| |||| |||||||| ||||||||||| |||||||||    
T  46046429 agggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtcc 46046482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 46934070 - 46934123
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||| | |||||||||| |||||||| | | |||||||||||||||||    
T  46934070 agggttaatatcacttttggtccctgtaatattaacaaattccggttttagtcc 46934123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 323
Target Start/End: Complemental strand, 46935219 - 46935178
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaatt 323  Q
    |||||||||||||||||||||||| | |||||| ||||||||    
T  46935219 aagggttaatacctcttttggtccctataatattagcgaatt 46935178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 31943959 - 31943999
Alignment:
Q  294 ctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  31943959 ctcttttcgtccctgtaatattagcgaattccggttttagt 31943999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 41947232 - 41947180
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||| ||||||| |||| |||||||| |||||||| ||||||||||||    
T  41947232 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 15923090 - 15923215
Alignment:
Q  68 ttaagccagcgaaaaatatcataacgagaacatcacgaaggcgta-ttactgctatgcaattgaaattccactaccccaccatcccattttttccggcca 166  Q
    |||| |||||||||||||||   ||||||||||||||||||   | ||||||||||||||| ||||||||| |||| ||||| ||| ||||| ||| |||    
T  15923090 ttaatccagcgaaaaatatctccacgagaacatcacgaagggaaaattactgctatgcaatggaaattccagtaccgcaccaacccgtttttgccgccca 15923189  T
Q  167 gcatgtgatgtgattggttgcacggc 192  Q
    |||| |||||||||||||||||||||    
T  15923190 gcatttgatgtgattggttgcacggc 15923215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 24731934 - 24731987
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  24731934 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 24731987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 9481182 - 9481234
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  9481182 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 9481234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 21069514 - 21069566
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||  |||| |||| ||||||||||||||||||||||||||||||    
T  21069514 gggttaatacccattttagtccctgtaatatgagcgaattccggttttagtcc 21069566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 21070916 - 21070864
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||| ||||||    
T  21070916 agggttaataccccttttagtccctgtaatatgagcgaattccggtattagtc 21070864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 32017883 - 32017829
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||| ||||||| |||| |||||||| |||||||||||||||||||||    
T  32017883 aagggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtcc 32017829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 7522408 - 7522315
Alignment:
Q  92 cgagaacatcacgaaggcgtattactgctatgcaattgaaattccactaccccaccatcccattttttccggccagcatgtgatgtgattggtt 185  Q
    ||||||| |||||||| | ||||||  || | |||||||||  ||||||||| || ||||| ||||| ||||||| |||| |||||||||||||    
T  7522408 cgagaacgtcacgaagacttattaccactgtacaattgaaaagccactacccgactatcccgtttttgccggccaacatgagatgtgattggtt 7522315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 18500708 - 18500655
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  18500708 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 15941303 - 15941355
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||  ||||||||| || ||||||| |||||||||||||||||||    
T  15941303 gggttaataccgtttttggtccctgaaatatgatcgaattccggttttagtcc 15941355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 26385278 - 26385334
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtccatgt 340  Q
    |||| |||||||||||| |||  |||||||| ||||||||| |||||||||||||||    
T  26385278 gggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgt 26385334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 10321738 - 10321785
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||| |||| |||||||| |||||||||||||||||||||    
T  10321738 aatacttcttttcgtccctgtaatattagcgaattccggttttagtcc 10321785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Complemental strand, 26385647 - 26385600
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||| |||| |||||||| ||||||||||| |||||||||    
T  26385647 aatacctcttttcgtccctgtaatattagcgaattccgattttagtcc 26385600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 18500313 - 18500367
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| | |||||| |||||||| ||||||||||||    
T  18500313 aagggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtcc 18500367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 34113641 - 34113591
Alignment:
Q  286 gttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||  ||||||||| |||||||| |||||||| ||||||||||||    
T  34113641 gttaataccatttttggtccctgtaatattagcgaatttcggttttagtcc 34113591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 9854265 - 9854212
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||||||||||  ||||| |||| |||||||| ||||||||| ||||||||||    
T  9854265 aagggttaatactgctttttgtccctgtaatattagcgaattctggttttagtc 9854212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 19284134 - 19284182
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtcca 337  Q
    |||||||||||| || | |||||||| |||||||||| |||||||||||    
T  19284134 aatacctcttttcgttcatgtaatattagcgaattccagttttagtcca 19284182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 30960051 - 30959993
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtccatgt 340  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  30960051 aagggttaataccacttttggtccctgtaatattagcgaattccggttttagtccatgt 30959993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 12419102 - 12419048
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  12419102 aagggttaataccacttttggtccctgtaatattagcgaattccggttttagtcc 12419048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 12431162 - 12431108
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  12431162 aagggttaataccacttttggtccctgtaatattagcgaattccggttttagtcc 12431108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 23046696 - 23046754
Alignment:
Q  273 tataatttcaagggttaatacctcttttggtccttgtaatatgagcgaattccggtttt 331  Q
    |||| |||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  23046696 tatattttctagggtaaatacctcttttcgtccttgtaatatgagcgaattccggtttt 23046754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 19251469 - 19251523
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  19251469 aagggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 19251523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 19251848 - 19251795
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| ||||||||||||| || ||||||||||||||||||    
T  19251848 agggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 19251795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 23854688 - 23854740
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  23854688 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 23854740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 30958684 - 30958736
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||| |||||||||| |||||||| |||||||| ||||||||||||    
T  30958684 gggttaataccacttttggtccctgtaatattagcgaatttcggttttagtcc 30958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 42670717 - 42670769
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||| |||| |||||||  |||||||||||||||||||||    
T  42670717 gggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtcc 42670769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 336
Target Start/End: Complemental strand, 26560928 - 26560881
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  26560928 aatacctcttttcgtccttgtaatattagcgaattccgattttagtcc 26560881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 13284411 - 13284461
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttag 333  Q
    |||||||||||| ||||| |||| |||||||| ||||||||||||||||||    
T  13284411 agggttaataccactttttgtccctgtaatatcagcgaattccggttttag 13284461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 17463471 - 17463417
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| | || |||||||| |||||||||||||||||||||    
T  17463471 aagggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtcc 17463417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 33290427 - 33290377
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggtttta 332  Q
    ||||||||||||| |||||||||| |||||||| ||||||||| |||||||    
T  33290427 aagggttaataccgcttttggtccctgtaatattagcgaattctggtttta 33290377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 17850966 - 17850913
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    |||||| |||||||||||| |||| |||||||| |||||||| |||||||||||    
T  17850966 aagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc 17850913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 22263573 - 22263520
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    |||||| |||||||||||| || | |||||||| ||||||||||||||||||||    
T  22263573 aagggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtc 22263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 26236126 - 26236179
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||| ||||||| ||||||||||||| ||||||||| |||||||||||    
T  26236126 agggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtcc 26236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 26236473 - 26236420
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  26236473 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 26236420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 39878102 - 39878154
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| ||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  39878102 agggtaaataccttttttg-tccttgtaatattagcgaattccggttttagtcc 39878154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 13284791 - 13284739
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||  |||||||||| |||||||| |||||||| ||||||||||||    
T  13284791 gggttaatactgcttttggtccctgtaatattagcgaatttcggttttagtcc 13284739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 17850587 - 17850639
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| |||||||||    
T  17850587 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtcc 17850639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 23047961 - 23047913
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggtttt 331  Q
    ||||| ||||||| |||| |||| |||||||||||||||||||||||||    
T  23047961 agggtaaatacctattttcgtccctgtaatatgagcgaattccggtttt 23047913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 23806330 - 23806278
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  23806330 gggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtcc 23806278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 26136195 - 26136143
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| ||||||||||||| | |||||| ||||||||||||    
T  26136195 gggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc 26136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 336
Target Start/End: Original strand, 21481002 - 21481053
Alignment:
Q  285 ggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| ||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  21481002 ggttcataccccttttggtccttgtaatattaacgaattccagttttagtcc 21481053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 331
Target Start/End: Complemental strand, 23855072 - 23855025
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggtttt 331  Q
    |||| |||||||||||| |||| |||||||| ||||||||||||||||    
T  23855072 gggtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 13254809 - 13254763
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    |||| ||||||| |||| |||||||| ||||||||||||||||||||    
T  13254809 aatatctcttttcgtccctgtaatattagcgaattccggttttagtc 13254763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 20498746 - 20498799
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||  |||||||| |||||||| ||||||||||||    
T  20498746 agggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtcc 20498799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 33290048 - 33290101
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||   ||||||||| |||||||| |||||||||| ||||||||||    
T  33290048 agggttaatactgtttttggtccctgtaatattagcgaattccagttttagtcc 33290101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 17606686 - 17606632
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  17606686 aagggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 17606632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 33629070 - 33629016
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  33629070 aagggttaatacctctttttgtccctgtaatattagcgaattccggttttagtcc 33629016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 37236716 - 37236770
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  37236716 aaggattaatatctcttttggtccctgtaatatgagcgaattccggttttagtcc 37236770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 27039637 - 27039690
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  27039637 agggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtcc 27039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 17502107 - 17502055
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  17502107 gggttaatatcacttttggtccttgtaatattagcgaattccggttttagtcc 17502055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 336
Target Start/End: Complemental strand, 42510392 - 42510341
Alignment:
Q  285 ggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  42510392 ggttaataccacttttggtccctgtaatattagcgaattccggttttagtcc 42510341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 18462284 - 18462338
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  18462284 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 18462338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 34939818 - 34939720
Alignment:
Q  87 cataacgagaacatcacgaaggcgtattactgctatgcaattgaaattccactaccccaccatcccattttttccggccagcatgtgatgtgattggtt 185  Q
    |||| ||||||||||||| | || | |||| |||||  ||||||||||||| |||| || |||||  ||||||||||||| |||| |||||||||||||    
T  34939818 catagcgagaacatcacggaagcattttaccgctatataattgaaattccattaccacatcatcctgttttttccggccatcatgagatgtgattggtt 34939720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 39711456 - 39711398
Alignment:
Q  278 tttcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||    
T  39711456 tttcaagggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtcc 39711398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 17500768 - 17500820
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||||||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  17500768 agggttaataccatttttggtccctgtaatattagcgaattccggttttagtc 17500820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 20996047 - 20995989
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtccatgt 340  Q
    ||||||||||||||||||| |||| |||||||| ||||||||   ||||||||||||||    
T  20996047 aagggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgt 20995989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 52058011 - 52058061
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    |||| |||||||||||| ||||||||||||| | |||||||||||||||||    
T  52058011 gggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagt 52058061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 33628689 - 33628742
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| ||||||||| |||||||||||    
T  33628689 agggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtcc 33628742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 43400752 - 43400805
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||||||| |||  | ||||||||||||||||||||||| ||||    
T  43400752 agggttaatacctcttttcgtctctataatatgagcgaattccggttttggtcc 43400805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 48072340 - 48072287
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| ||| ||||||||| || ||||||||||||||||||    
T  48072340 agggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtcc 48072287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 29696564 - 29696616
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||| |||||||||||| |||| |||||||| |||||||| |||||||||||    
T  29696564 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtc 29696616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 39711074 - 39711125
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  39711074 gggtaaatacctcttttcgtc-ttgtaatattagcgaattccggttttagtcc 39711125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 39826424 - 39826372
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  39826424 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtcc 39826372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 43539727 - 43539675
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    ||||||||||| ||||||| |||| |||||||| ||| |||||||||||||||    
T  43539727 aagggttaatagctcttttcgtccctgtaatattagcaaattccggttttagt 43539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 17606309 - 17606356
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||| |||| |||||||| ||||||||||| |||||||||    
T  17606309 aatacctcttttcgtccctgtaatattagcgaattccgattttagtcc 17606356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 20995697 - 20995750
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| ||||||||||||  ||  |||||||| |||||||||||||||||||||    
T  20995697 agggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtcc 20995750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 29696937 - 29696884
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    |||||| |||||||||||| ||   |||||||| ||||||||||||||||||||    
T  29696937 aagggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtc 29696884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 16294038 - 16294099
Alignment:
Q  271 tctataatttcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    ||||||||||  ||||||||||||  ||||||||| |||||||| |||||||| || |||||||    
T  16294038 tctataattt--agggttaataccgattttggtccctgtaatattagcgaatttcgattttagt 16294099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 18342395 - 18342343
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| ||||||| |||| |||| |||||||| |||||||| ||||||||||||    
T  18342395 gggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtcc 18342343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 39971024 - 39970972
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| | |||||| ||||||||||||    
T  39971024 gggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtcc 39970972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 52058388 - 52058336
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    |||||| |||||||||||| |||| |||||||| ||||||||  |||||||||    
T  52058388 aagggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagt 52058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 28071878 - 28071825
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||||||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  28071878 aagggttaataccccttttggtccctgtaatatgagcgaatttcggttttagtc 28071825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 41424515 - 41424562
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttt 330  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  41424515 agggttaatacctcttttggtccttgcaatattagcgaattccggttt 41424562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 6817121 - 6817175
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| ||||||||||||| || ||||||||||||||||||    
T  6817121 aagggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtcc 6817175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 14143900 - 14143954
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  14143900 aagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 14143954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 17762281 - 17762335
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  17762281 aagggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtcc 17762335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 14411696 - 14411749
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  14411696 agggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 14411749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 24651078 - 24651021
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtccatgt 340  Q
    ||||| |||||||||||| |||  |||||||| |||||||||||||||||||||||||    
T  24651078 agggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgt 24651021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 23979279 - 23979227
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| |||||||||||||||||||||    
T  23979279 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 23979227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 27159328 - 27159280
Alignment:
Q  288 taatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  27159328 taatacctcttttcgtccttgtaatattagcgaatttcggttttagtcc 27159280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 29445190 - 29445131
Alignment:
Q  277 atttcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| ||||||||||| ||||||| |||| |||||||| |||||||||| ||||||||||    
T  29445190 attttaagggttaatatctcttttcgtccctgtaatattagcgaattccagttttagtcc 29445131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 24074302 - 24074355
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  24074302 agggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtcc 24074355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 24837168 - 24837221
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||  |||||||||||||||||||||    
T  24837168 agggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtcc 24837221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 27158989 - 27159042
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||||||||||||||||| |||| |||||||| |||||||| | |||||||||    
T  27158989 aagggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtc 27159042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 7126296 - 7126244
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||| ||||||||||||  ||| |||||||| ||||||||||||||||||||    
T  7126296 agggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtc 7126244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 24837547 - 24837495
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtcc 24837495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 28070459 - 28070518
Alignment:
Q  277 atttcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||||  ||||||||| ||||||||||| ||||||  ||||||||||    
T  28070459 atttaaagggttaataccatttttggtccctgtaatatgagtgaattctagttttagtcc 28070518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Complemental strand, 31800012 - 31799965
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||| |||| | |||||| |||||||||||||||||||||    
T  31800012 aatacctcttttcgtccctataatattagcgaattccggttttagtcc 31799965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Complemental strand, 41001725 - 41001678
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||| |||| |||| |||||||| |||||||||||||||||||||    
T  41001725 aataccttttttcgtccctgtaatattagcgaattccggttttagtcc 41001678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 20709591 - 20709537
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||||||||| |||| |||||||| | ||||||  |||||||||||    
T  20709591 aagggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtcc 20709537  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 22571075 - 22571129
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||||||||||   |||| ||||||||||||| ||||||||||| |||||||||    
T  22571075 aagggttaatactgatttttgtccttgtaatattagcgaattccgattttagtcc 22571129  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 7125921 - 7125970
Alignment:
Q  287 ttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||| || | |||||||| ||||||||||| |||||||||    
T  7125921 ttaatacctcttttcgttcctgtaatattagcgaattccgattttagtcc 7125970  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 14144280 - 14144227
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||||||| |||  |||||||| | ||||||||| |||||||||    
T  14144280 agggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtcc 14144227  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 17762661 - 17762608
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||| ||| ||||||||| |||||||||||    
T  17762661 agggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtcc 17762608  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 41425831 - 41425790
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattc 324  Q
    ||||||||||||||||||||||| || ||||| |||||||||    
T  41425831 agggttaatacctcttttggtccctgcaatatcagcgaattc 41425790  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 18336833 - 18336782
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| ||||| || |||||||||||||||||||||    
T  18336833 gggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtcc 18336782  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 31799640 - 31799692
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||| |||||||||||| |||| | |||||| ||||||||||||||| |||||    
T  31799640 gggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtcc 31799692  T

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Target: scaffold0361 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 4558 - 4614
Alignment:
Q  280 tcaagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  4558 tcaagggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtcc 4614  T

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Target: scaffold0361; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 332
Target Start/End: Complemental strand, 4941 - 4892
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggtttta 332  Q
    ||||| |||||||||||| |||| |||||||| ||| |||||||||||||    
T  4941 agggtaaatacctcttttcgtccctgtaatattagcaaattccggtttta 4892  T

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Target: scaffold0117 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 12357 - 12308
Alignment:
Q  287 ttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  12357 ttaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 12308  T

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Target: scaffold0449 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 7580 - 7526
Alignment:
Q  282 aagggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    |||||| ||||||| |||| |||| |||||||| |||||||||||||||||||||    
T  7580 aagggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtcc 7526  T

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Target: scaffold0449; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 7231 - 7276
Alignment:
Q  289 aatacctcttttggtccttgtaatatgagcgaattccggttttagt 334  Q
    |||||||||||| ||||||||||||| ||||||||| ||| |||||    
T  7231 aatacctcttttcgtccttgtaatattagcgaattctggtgttagt 7276  T

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Target: scaffold0477 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 4879 - 4936
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtccatgt 340  Q
    ||||| |||||||||||| || | |||||||| |||||||| ||||||||||||||||    
T  4879 agggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtccatgt 4936  T

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Target: scaffold0352 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 6058 - 6005
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| ||||||||||||||||| || ||||| ||||||||||| |||||||||    
T  6058 agggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtcc 6005  T

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Target: scaffold0352; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 4666 - 4719
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| || ||||| |||||||||| ||||||||||    
T  4666 agggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtcc 4719  T

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Target: scaffold0185 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 3868 - 3921
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||| ||||||| |||| |||||||| |||||||||||||||||||||    
T  3868 agggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtcc 3921  T

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Target: scaffold0141 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 8324 - 8377
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| |||||||||||| |||| |||||||| |||||||| ||||||||||||    
T  8324 agggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 8377  T

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Target: scaffold0176 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 16007 - 15955
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtc 335  Q
    ||||| |||| ||||||| |||| |||||||| ||||||||||||||||||||    
T  16007 agggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtc 15955  T

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Target: scaffold0586 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 5912 - 5873
Alignment:
Q  284 gggttaatacctcttttggtccttgtaatatgagcgaatt 323  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  5912 gggttaatacctcttttggtccatgtaatattagcgaatt 5873  T

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Target: scaffold0809 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 1785 - 1732
Alignment:
Q  283 agggttaatacctcttttggtccttgtaatatgagcgaattccggttttagtcc 336  Q
    ||||| ||| |||||||| |||| |||||||| | |||||||||||||||||||    
T  1785 agggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtcc 1732  T

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