View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8226_high_33 (Length: 290)
Name: NF8226_high_33
Description: NF8226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8226_high_33 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 24884928 - 24885199
Alignment:
| Q |
1 |
ttgatggctcaataaccaatcagctcggtcttgttgaaa-aagtcgaatagtgacataaggttttatcaaggcagtgagcccttagtattgtgatggccc |
99 |
Q |
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||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24884928 |
ttgatggctcaataaccaatcagctcgatcttgtggaaagaagtcgaacagtgacataaggttttatcaaggcagtgagcccttagtattgtgatggccc |
24885027 |
T |
|
| Q |
100 |
tgagtggatcaaagagtgagtacgaggcctgacctgagagattctttaataagaaggtggcctttgagcttaatttggccaagttggagccgacgttgtt |
199 |
Q |
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||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24885028 |
tgagtggatcagagagtgagtacgaggcctgagctgagagattctttaataagaaggtggcctttgagcttaatttggccaagttggagccgacgttgtt |
24885127 |
T |
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| Q |
200 |
gattacaaggacaagcatgaaatttagatgggtgtgatcatgaagttttctcataaagacaaagaaatccag |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| |
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| T |
24885128 |
gattacaaggacaagcatgaaatttagatgggtgtgattatggagtgttctcataaagacaaagaaatccag |
24885199 |
T |
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