View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8226_high_34 (Length: 270)
Name: NF8226_high_34
Description: NF8226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8226_high_34 |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 248
Target Start/End: Complemental strand, 32203775 - 32203542
Alignment:
| Q |
15 |
cagagatgtacttagcacaagattccattcctatcttatgaatgaggtcagggattatttccatcatcttcatcatcacggacgagtttaacaccattgt |
114 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32203775 |
cagagatgttcttagcacaagattccattcctatcttatgaatgaggtcagggattatttccatcatcttcatcatcacggacgagtttaacaccattgt |
32203676 |
T |
|
| Q |
115 |
acttaagagcatttaccacagccaaaatcttggtttggctcttaaatcctttcttttctatttccttattaacatttacatgaatacctcttccttctcc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32203675 |
acttaagagcatttaccacagccaaaatcttggtttggctcttaaatcctttcttttctatttccttatttacatttacatgaatacctcttccttctcc |
32203576 |
T |
|
| Q |
215 |
ttcattaagcccctcaactttgagccgtctggcc |
248 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
32203575 |
ttcattaagcccctcaactttgagccgtctggcc |
32203542 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 248
Target Start/End: Original strand, 35566218 - 35566451
Alignment:
| Q |
15 |
cagagatgtacttagcacaagattccattcctatcttatgaatgaggtcagggattatttccatcatcttcatcatcacggacgagtttaacaccattgt |
114 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35566218 |
cagagatgttcttagcacaagattccattcctatcttatgaatgaggtcagggattatttccatcatcttcatcatcacggacgagtttaacaccattgt |
35566317 |
T |
|
| Q |
115 |
acttaagagcatttaccacagccaaaatcttggtttggctcttaaatcctttcttttctatttccttattaacatttacatgaatacctcttccttctcc |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
35566318 |
acttaagagcatttaccacagccaaaatcttggtttggctcttaaatcctttcttttctatttccttatttacatttacatgaatacctcttccttctcc |
35566417 |
T |
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| Q |
215 |
ttcattaagcccctcaactttgagccgtctggcc |
248 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
35566418 |
ttcattaagcccctcaactttgagccgtctggcc |
35566451 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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