View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8226_high_54 (Length: 204)

Name: NF8226_high_54
Description: NF8226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8226_high_54
NF8226_high_54
[»] chr2 (12 HSPs)
chr2 (48-152)||(41858986-41859090)
chr2 (9-46)||(41858744-41858781)
chr2 (150-185)||(41859106-41859141)
chr2 (1-46)||(18958912-18958957)
chr2 (72-138)||(12787414-12787480)
chr2 (1-31)||(38434956-38434986)
chr2 (1-38)||(11017319-11017356)
chr2 (1-46)||(12141549-12141594)
chr2 (4-37)||(14197404-14197437)
chr2 (1-46)||(25834686-25834731)
chr2 (1-46)||(38429889-38429934)
chr2 (1-46)||(43238325-43238370)
[»] chr8 (13 HSPs)
chr8 (1-46)||(9695636-9695681)
chr8 (1-46)||(12611540-12611585)
chr8 (1-46)||(18474192-18474237)
chr8 (1-46)||(41444558-41444603)
chr8 (3-46)||(42493538-42493581)
chr8 (1-39)||(7103275-7103313)
chr8 (1-46)||(12491370-12491415)
chr8 (1-46)||(13171881-13171926)
chr8 (1-46)||(18125178-18125223)
chr8 (1-46)||(29700281-29700326)
chr8 (1-46)||(36565473-36565518)
chr8 (1-46)||(39946862-39946907)
chr8 (1-46)||(45512727-45512772)
[»] chr5 (14 HSPs)
chr5 (1-46)||(43475245-43475290)
chr5 (1-46)||(27898-27943)
chr5 (1-46)||(1275269-1275314)
chr5 (1-46)||(1287811-1287856)
chr5 (1-46)||(4496389-4496434)
chr5 (1-46)||(14667768-14667813)
chr5 (1-46)||(16347610-16347655)
chr5 (1-46)||(18351140-18351185)
chr5 (1-46)||(20456778-20456823)
chr5 (1-46)||(24178515-24178560)
chr5 (1-46)||(28977091-28977136)
chr5 (1-46)||(31636152-31636197)
chr5 (1-46)||(33667221-33667266)
chr5 (1-46)||(38684972-38685017)
[»] chr1 (21 HSPs)
chr1 (1-46)||(5338729-5338774)
chr1 (3-46)||(43423726-43423769)
chr1 (1-46)||(1661435-1661480)
chr1 (1-46)||(13827949-13827994)
chr1 (1-46)||(40416376-40416421)
chr1 (1-40)||(29578163-29578202)
chr1 (1-46)||(1210750-1210795)
chr1 (1-46)||(4001687-4001732)
chr1 (1-46)||(8671923-8671968)
chr1 (1-46)||(15085939-15085984)
chr1 (1-46)||(17267928-17267973)
chr1 (1-46)||(22090101-22090146)
chr1 (1-46)||(32082977-32083022)
chr1 (1-46)||(34792581-34792626)
chr1 (1-46)||(38868887-38868932)
chr1 (5-46)||(48431638-48431679)
chr1 (1-46)||(51602061-51602106)
chr1 (1-29)||(2544604-2544632)
chr1 (3-39)||(8343097-8343133)
chr1 (6-46)||(17275206-17275246)
chr1 (6-38)||(51812535-51812567)
[»] chr7 (22 HSPs)
chr7 (1-38)||(38920799-38920836)
chr7 (3-39)||(30200202-30200238)
chr7 (3-39)||(40139158-40139194)
chr7 (1-46)||(2885954-2885999)
chr7 (1-46)||(6374873-6374918)
chr7 (1-46)||(12841507-12841552)
chr7 (1-46)||(12966027-12966072)
chr7 (1-46)||(13859240-13859285)
chr7 (1-46)||(19262665-19262710)
chr7 (1-46)||(22349625-22349670)
chr7 (1-46)||(26742128-26742173)
chr7 (1-46)||(27021924-27021969)
chr7 (1-46)||(28020969-28021014)
chr7 (1-46)||(34869425-34869470)
chr7 (1-46)||(35906433-35906478)
chr7 (1-46)||(36514439-36514484)
chr7 (1-46)||(40169654-40169699)
chr7 (1-46)||(42187475-42187520)
chr7 (1-46)||(43281679-43281724)
chr7 (1-46)||(45836712-45836757)
chr7 (5-46)||(47848683-47848724)
chr7 (1-46)||(49029281-49029326)
[»] chr4 (22 HSPs)
chr4 (1-46)||(28236188-28236233)
chr4 (1-46)||(42293481-42293526)
chr4 (2-46)||(42639252-42639296)
chr4 (7-46)||(1427516-1427555)
chr4 (3-46)||(33709931-33709974)
chr4 (1-44)||(46715606-46715649)
chr4 (3-46)||(49987435-49987478)
chr4 (3-46)||(50662394-50662437)
chr4 (1-44)||(51252695-51252738)
chr4 (1-31)||(54470212-54470242)
chr4 (1-46)||(4440858-4440903)
chr4 (1-46)||(26037737-26037782)
chr4 (1-46)||(27450411-27450456)
chr4 (1-46)||(31459035-31459080)
chr4 (1-46)||(31960046-31960091)
chr4 (1-46)||(35555879-35555924)
chr4 (1-46)||(37797857-37797902)
chr4 (1-46)||(38570979-38571024)
chr4 (1-46)||(43433929-43433974)
chr4 (1-46)||(52569747-52569792)
chr4 (1-46)||(53707799-53707844)
chr4 (1-45)||(31403250-31403293)
[»] scaffold0570 (1 HSPs)
scaffold0570 (1-46)||(1180-1225)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-42)||(82726-82767)
[»] scaffold0018 (2 HSPs)
scaffold0018 (1-46)||(31473-31518)
scaffold0018 (1-46)||(44100-44145)
[»] chr6 (6 HSPs)
chr6 (1-46)||(5258380-5258425)
chr6 (1-46)||(9568667-9568712)
chr6 (1-46)||(20427868-20427913)
chr6 (1-46)||(21870305-21870350)
chr6 (1-46)||(28085381-28085426)
chr6 (1-46)||(32755926-32755971)
[»] chr3 (12 HSPs)
chr3 (1-46)||(26490320-26490365)
chr3 (1-46)||(27917575-27917620)
chr3 (1-38)||(31337766-31337803)
chr3 (1-46)||(36820193-36820238)
chr3 (1-30)||(41842759-41842788)
chr3 (1-46)||(42510246-42510291)
chr3 (1-46)||(47233828-47233873)
chr3 (1-46)||(49503786-49503831)
chr3 (1-46)||(50960865-50960910)
chr3 (1-46)||(52138805-52138850)
chr3 (1-46)||(54128383-54128428)
chr3 (3-39)||(55244305-55244341)


Alignment Details
Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 41858986 - 41859090
Alignment:
Q  48 atttcaagttaattcggtttactatttcataagatctatgttatctgtacttctataaatttcagtttcaattttcatggtgtatgtttttgaatcccct 147  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  41858986 atttcaagttaattaggtttactatttcataagatctatgttatctgtacttatctaaatttcagtttcaattttcatggtgtatgtttttgaatcccct 41859085  T
Q  148 cctaa 152  Q
    |||||    
T  41859086 cctaa 41859090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 41858744 - 41858781
Alignment:
Q  9 tagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41858744 tagtagaaaagatggtggaaactgggcttagatggttt 41858781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 41859106 - 41859141
Alignment:
Q  150 taattttagagttccctttatattagtgttacaaag 185  Q
    ||||||||||||||||||||||||||||||||||||    
T  41859106 taattttagagttccctttatattagtgttacaaag 41859141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18958912 - 18958957
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||    
T  18958912 agcacctatagtagaaaagatggtggaaaataggcttaggtggttt 18958957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 12787480 - 12787414
Alignment:
Q  72 tttcataagatctatgttatctgtacttctataaatttcagtttcaattttcatggtgtatgttttt 138  Q
    |||||| | ||||||||||| | ||||| | |||||||||||||||||  ||||| |||||||||||    
T  12787480 tttcattacatctatgttatatctacttgtctaaatttcagtttcaataatcatgttgtatgttttt 12787414  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 38434956 - 38434986
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaact 31  Q
    |||||||||||||||||||||||||||||||    
T  38434956 agcacctatagtagaaaagatggtggaaact 38434986  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11017319 - 11017356
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggctta 38  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  11017319 agcacctatagtagaaaagatcgtggaaactcggctta 11017356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12141549 - 12141594
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||||||||   ||||||| ||||||    
T  12141549 agcacctatagtagaaaagatggtggaaaagaggcttaggtggttt 12141594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 14197437 - 14197404
Alignment:
Q  4 acctatagtagaaaagatggtggaaactgggctt 37  Q
    |||||||||||||||||||||||||||| |||||    
T  14197437 acctatagtagaaaagatggtggaaactaggctt 14197404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25834686 - 25834731
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  25834686 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 25834731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38429889 - 38429934
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  38429889 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 38429934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 43238370 - 43238325
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  43238370 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 43238325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9695636 - 9695681
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  9695636 agcacctatagtagaaaagatggtggaaactcggcttaggtggttt 9695681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12611540 - 12611585
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||||    
T  12611540 agcacctaaagtagaaaagatggtggaaactaggcttaggtggttt 12611585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18474237 - 18474192
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  18474237 agcacctatagtagaaatgatggtggaaactaggcttagttggttt 18474192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41444603 - 41444558
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||||| || |||| ||||||    
T  41444603 agcacctatagtagaaaagatggtggaaactaggtttaggtggttt 41444558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 42493581 - 42493538
Alignment:
Q  3 cacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||    
T  42493581 cacctatagtagaaaagattgtggaaactaggcttaggtggttt 42493538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7103275 - 7103313
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttag 39  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  7103275 agcacctatagtagaaaagatggtagaaactaggcttag 7103313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12491415 - 12491370
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  12491415 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 12491370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13171926 - 13171881
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||| |  |||||| ||||||    
T  13171926 agcacctatagtagaaaagatggtggaaaatatgcttaggtggttt 13171881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18125178 - 18125223
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  18125178 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 18125223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29700281 - 29700326
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||| ||||| | ||||||| ||||||    
T  29700281 agcacctatagtagaaaagatggaggaaagttggcttaggtggttt 29700326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36565518 - 36565473
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  36565518 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 36565473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39946862 - 39946907
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  39946862 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 39946907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45512772 - 45512727
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||| |||||| |  |||||||||||||    
T  45512772 agcacctatagtagaaaagatgatggaaaataagcttagatggttt 45512727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43475245 - 43475290
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  43475245 agcacctatagtagaaaagatggtggaaactaggcttaggtggttt 43475290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27898 - 27943
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||| |||||| | ||||||| ||||||    
T  27898 agcacctatagtagaaaagatgatggaaaataggcttaggtggttt 27943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1275269 - 1275314
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  1275269 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 1275314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1287856 - 1287811
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  1287856 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 1287811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4496389 - 4496434
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  4496389 agcacctatagtagaaaagctggtagaaaataggcttagatggttt 4496434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14667768 - 14667813
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||| | | ||||| ||||||    
T  14667768 agcacctatagtagaaaagatggtggaaaatagacttaggtggttt 14667813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16347655 - 16347610
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  16347655 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 16347610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18351185 - 18351140
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||| ||||| |||||| ||||||| ||||||    
T  18351185 agcacctatagtagaaaatatggtagaaactaggcttaggtggttt 18351140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20456778 - 20456823
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  20456778 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 20456823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24178515 - 24178560
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  24178515 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 24178560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28977136 - 28977091
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  28977136 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 28977091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31636197 - 31636152
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||| |||||| | ||||| ||||||    
T  31636197 agcacctatagtagaaaagatggtagaaactagacttaggtggttt 31636152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33667221 - 33667266
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||| |||||| | ||||| ||||||    
T  33667221 agcacctatagtagaaaagatggtagaaactagacttaggtggttt 33667266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38684972 - 38685017
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  38684972 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 38685017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5338729 - 5338774
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||    
T  5338729 agcacctatagtagaaaagatggtggaaactgagcttaggtggttt 5338774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 43423726 - 43423769
Alignment:
Q  3 cacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||    
T  43423726 cacctatagtagaaaagatggtggaaactaggcttaggtggttt 43423769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1661435 - 1661480
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||    
T  1661435 agcacctatagtagaaaagatggtggaaaataggctcagatggttt 1661480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13827994 - 13827949
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||||| || |||| ||||||    
T  13827994 agcacctatagtagaaaagatggtggaaactagggttaggtggttt 13827949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40416376 - 40416421
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||    
T  40416376 agcacctatagtagaaaagatggtggaaacgaggcttaggtggttt 40416421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 29578202 - 29578163
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttaga 40  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  29578202 agcacctatagtagaaaaaatggtggaaaatgggcttaga 29578163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1210750 - 1210795
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  1210750 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 1210795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4001732 - 4001687
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  4001732 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 4001687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8671923 - 8671968
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  8671923 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 8671968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15085939 - 15085984
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  15085939 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 15085984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17267973 - 17267928
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||| |||||||||||||||| ||||||||| ||||||| ||||||    
T  17267973 agcatctatagtagaaaagattgtggaaacttggcttaggtggttt 17267928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22090101 - 22090146
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  22090101 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 22090146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32083022 - 32082977
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  32083022 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 32082977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34792626 - 34792581
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  34792626 agcacctatagtagaaaagttggtagaaagtaggcttagatggttt 34792581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38868887 - 38868932
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||  |||||||||||||||||||| ||||||| ||||||    
T  38868887 agcacctatcatagaaaagatggtggaaactcggcttaggtggttt 38868932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 48431679 - 48431638
Alignment:
Q  5 cctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||| | ||||||| ||||||    
T  48431679 cctatagtagaaaagatggtggaaaataggcttaggtggttt 48431638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 51602061 - 51602106
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  51602061 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 51602106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 2544604 - 2544632
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaa 29  Q
    |||||||||||||||||||||||||||||    
T  2544604 agcacctatagtagaaaagatggtggaaa 2544632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 8343133 - 8343097
Alignment:
Q  3 cacctatagtagaaaagatggtggaaactgggcttag 39  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  8343133 cacctttagtagaaaagatggtggaaactaggcttag 8343097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 17275206 - 17275246
Alignment:
Q  6 ctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||| ||||||||| ||||||| ||||||    
T  17275206 ctatagtagaaaagattgtggaaacttggcttaggtggttt 17275246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 51812535 - 51812567
Alignment:
Q  6 ctatagtagaaaagatggtggaaactgggctta 38  Q
    |||||||||||||||||||||||||| ||||||    
T  51812535 ctatagtagaaaagatggtggaaactaggctta 51812567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38920799 - 38920836
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggctta 38  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  38920799 agcacctatagtagaaaagatggtggaaactaggctta 38920836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 30200238 - 30200202
Alignment:
Q  3 cacctatagtagaaaagatggtggaaactgggcttag 39  Q
    ||||||||||||||||||||||||||||| |||||||    
T  30200238 cacctatagtagaaaagatggtggaaactaggcttag 30200202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 40139194 - 40139158
Alignment:
Q  3 cacctatagtagaaaagatggtggaaactgggcttag 39  Q
    |||||||||||||||| ||||||||||||||||||||    
T  40139194 cacctatagtagaaaatatggtggaaactgggcttag 40139158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2885999 - 2885954
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  2885999 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 2885954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6374873 - 6374918
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  6374873 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 6374918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12841552 - 12841507
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  12841552 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 12841507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12966027 - 12966072
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||| |||||||||||||||||||  |||||| ||||||    
T  12966027 agcacctatagaagaaaagatggtggaaactatgcttaggtggttt 12966072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13859285 - 13859240
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  13859285 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 13859240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19262710 - 19262665
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||| |||||||||||||| |||||| ||||||| ||||||    
T  19262710 agcacctattgtagaaaagatggtagaaacttggcttaggtggttt 19262665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22349625 - 22349670
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  22349625 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 22349670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26742173 - 26742128
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||| | || |||| ||||||    
T  26742173 agcacctatagtagaaaagatggtggaaaataggattaggtggttt 26742128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27021969 - 27021924
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| ||||| ||||| ||||||| ||||||    
T  27021969 agcacctatagtagaaaagttggtgaaaactaggcttaggtggttt 27021924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28020969 - 28021014
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||| ||| ||||||||||||||||||||| ||||||| ||||||    
T  28020969 agcacttatcgtagaaaagatggtggaaacttggcttaggtggttt 28021014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34869425 - 34869470
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  34869425 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 34869470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35906478 - 35906433
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  35906478 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 35906433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36514484 - 36514439
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||| |||||| | ||||| ||||||    
T  36514484 agcacctatagtagaaaagatggtagaaactagacttaggtggttt 36514439  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40169654 - 40169699
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||| ||||||||||||||||||||||| | ||||||| ||||||    
T  40169654 agcacttatagtagaaaagatggtggaaaataggcttaggtggttt 40169699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42187475 - 42187520
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||| |||||||||||||||||| | ||||||| ||||||    
T  42187475 agcacctataatagaaaagatggtggaaaataggcttaggtggttt 42187520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43281679 - 43281724
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  43281679 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 43281724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45836757 - 45836712
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  45836757 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 45836712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 47848683 - 47848724
Alignment:
Q  5 cctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||| | ||||||| ||||||    
T  47848683 cctatagtagaaaagatggtggaaaataggcttaggtggttt 47848724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49029281 - 49029326
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  49029281 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 49029326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28236188 - 28236233
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||    
T  28236188 agcacctatagtagaaaagttggtggaaaataggcttagatggttt 28236233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42293526 - 42293481
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||||    
T  42293526 agcacctatagtagaaaagatgatggaaactcggcttaggtggttt 42293481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 42639296 - 42639252
Alignment:
Q  2 gcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||    
T  42639296 gcacctatagtagaaaagatggtggaaaccaggcttaggtggttt 42639252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 1427555 - 1427516
Alignment:
Q  7 tatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  1427555 tatagtagaaaacatggtggaaactaggcttagatggttt 1427516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 33709931 - 33709974
Alignment:
Q  3 cacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||||| || |||| ||||||    
T  33709931 cacctatagtagaaaagatggtggaaactaggtttaggtggttt 33709974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46715649 - 46715606
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggt 44  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||    
T  46715649 agcacctattgtagaaaagatggtggaaactaggcttaggtggt 46715606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 49987435 - 49987478
Alignment:
Q  3 cacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||    
T  49987435 cacctatagtagaaaagatggtggaaaataggcttaggtggttt 49987478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 50662394 - 50662437
Alignment:
Q  3 cacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||    
T  50662394 cacctatagtagaaaagatggtggaaagtaggcttaggtggttt 50662437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51252738 - 51252695
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggt 44  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||    
T  51252738 agcacctctagtagaaaagatggtggaaactaggcttaggtggt 51252695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 54470212 - 54470242
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaact 31  Q
    |||||||||||||||||||||||||||||||    
T  54470212 agcacctatagtagaaaagatggtggaaact 54470242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4440858 - 4440903
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  4440858 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 4440903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26037782 - 26037737
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  26037782 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 26037737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27450456 - 27450411
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  27450456 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 27450411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31459035 - 31459080
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||| |||| | ||||||| ||||||    
T  31459035 agcacctatagtagaaaagatggtagaaaataggcttaggtggttt 31459080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31960091 - 31960046
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  31960091 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 31960046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 35555924 - 35555879
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||| |||||| | ||||| ||||||    
T  35555924 agcacctatagtagaaaagatggtagaaactagacttaggtggttt 35555879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37797857 - 37797902
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  37797857 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 37797902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38571024 - 38570979
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||| ||||||| ||||||||| ||||||| ||||||    
T  38571024 agcacctatagtacaaaagatagtggaaactaggcttaggtggttt 38570979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43433929 - 43433974
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  43433929 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 43433974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 52569792 - 52569747
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  52569792 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 52569747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 53707799 - 53707844
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  53707799 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 53707844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31403293 - 31403250
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggtt 45  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||    
T  31403293 agcacctatagtagaaaa-atggtggaaactaggcttaggtggtt 31403250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1225 - 1180
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  1225 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 1180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 82726 - 82767
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatg 42  Q
    ||||||||||||||||||| |||| |||| ||||||||||||    
T  82726 agcacctatagtagaaaagttggtagaaaatgggcttagatg 82767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31473 - 31518
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  31473 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 31518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44145 - 44100
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||||| ||||| | ||||||| ||||||    
T  44145 agcacctatagtagaaaagatggcggaaaataggcttaggtggttt 44100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 30; Significance: 0.00000007; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5258425 - 5258380
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  5258425 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 5258380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9568667 - 9568712
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||| |||||||||||||||| |||||| ||| ||||||||||||    
T  9568667 agcacttatagtagaaaagatgatggaaaatggacttagatggttt 9568712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20427913 - 20427868
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  20427913 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 20427868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21870350 - 21870305
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||| |||||||||||||||| |||||| ||||||| ||||||    
T  21870350 agcacctgtagtagaaaagatggtagaaactcggcttaggtggttt 21870305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28085381 - 28085426
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  28085381 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 28085426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32755926 - 32755971
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  32755926 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 32755971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.00000007; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26490320 - 26490365
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||| |||| | ||||||| ||||||    
T  26490320 agcacctatagtagaaaagatggtagaaaataggcttaggtggttt 26490365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27917575 - 27917620
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||| | || | ||||||||||||||    
T  27917575 agcacctatagtagaaaagatggtaggaaataggcttagatggttt 27917620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31337803 - 31337766
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggctta 38  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  31337803 agcacctatagtagaaaagatggttgaaactaggctta 31337766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36820238 - 36820193
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||| ||| |||||||||||||||| ||||||| ||||||    
T  36820238 agcacctatattagcaaagatggtggaaactaggcttaggtggttt 36820193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 41842788 - 41842759
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaac 30  Q
    ||||||||||||||||||||||||||||||    
T  41842788 agcacctatagtagaaaagatggtggaaac 41842759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42510291 - 42510246
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||||| ||||||| | ||||||| ||||||    
T  42510291 agcacctatagtagaaaagatagtggaaaataggcttaggtggttt 42510246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47233873 - 47233828
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  47233873 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 47233828  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49503831 - 49503786
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||| |||| | ||||||| ||||||    
T  49503831 agcacctatagtagaaaagatggtagaaaataggcttaggtggttt 49503786  T

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Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 50960910 - 50960865
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||| |||| | ||||||| ||||||    
T  50960910 agcacctatagtagaaaagatggtagaaaataggcttaggtggttt 50960865  T

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Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52138805 - 52138850
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||    
T  52138805 agcacctatagtagaaaagttggtagaaaataggcttagatggttt 52138850  T

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Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 54128383 - 54128428
Alignment:
Q  1 agcacctatagtagaaaagatggtggaaactgggcttagatggttt 46  Q
    |||||||||||||||||||||||| |||| | ||||||| ||||||    
T  54128383 agcacctatagtagaaaagatggtagaaaataggcttaggtggttt 54128428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 55244305 - 55244341
Alignment:
Q  3 cacctatagtagaaaagatggtggaaactgggcttag 39  Q
    ||||||||||||||||||||||||||||  |||||||    
T  55244305 cacctatagtagaaaagatggtggaaacaaggcttag 55244341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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