View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8228_high_2 (Length: 583)

Name: NF8228_high_2
Description: NF8228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8228_high_2
NF8228_high_2
[»] chr2 (55 HSPs)
chr2 (10-565)||(23226899-23227454)
chr2 (400-516)||(14740464-14740580)
chr2 (383-515)||(13724102-13724234)
chr2 (382-520)||(41478638-41478776)
chr2 (382-515)||(37990012-37990145)
chr2 (382-514)||(3055557-3055689)
chr2 (383-519)||(15372220-15372356)
chr2 (383-519)||(15896836-15896972)
chr2 (382-514)||(44398685-44398817)
chr2 (383-513)||(13197710-13197840)
chr2 (382-508)||(41492895-41493021)
chr2 (459-520)||(6648512-6648573)
chr2 (398-499)||(20900678-20900779)
chr2 (459-516)||(41492893-41492950)
chr2 (382-514)||(44397546-44397678)
chr2 (379-514)||(44398682-44398817)
chr2 (413-515)||(12320171-12320272)
chr2 (393-519)||(16243777-16243903)
chr2 (382-516)||(41478636-41478770)
chr2 (382-515)||(3055557-3055690)
chr2 (459-516)||(9047752-9047809)
chr2 (459-520)||(13197703-13197764)
chr2 (382-515)||(37990011-37990144)
chr2 (379-504)||(44397543-44397668)
chr2 (382-514)||(38917521-38917653)
chr2 (458-513)||(13724102-13724157)
chr2 (382-513)||(15896841-15896972)
chr2 (382-513)||(37666609-37666740)
chr2 (459-514)||(38917521-38917576)
chr2 (466-516)||(7680647-7680697)
chr2 (382-504)||(9047754-9047876)
chr2 (447-513)||(11582696-11582761)
chr2 (458-520)||(12170392-12170454)
chr2 (459-513)||(12337937-12337991)
chr2 (459-513)||(15372302-15372356)
chr2 (383-513)||(16044317-16044447)
chr2 (382-504)||(16243782-16243904)
chr2 (463-501)||(30985772-30985810)
chr2 (398-439)||(3243129-3243170)
chr2 (382-515)||(13344482-13344615)
chr2 (459-516)||(37666607-37666664)
chr2 (458-514)||(4684007-4684063)
chr2 (459-514)||(13344560-13344615)
chr2 (216-340)||(24009447-24009571)
chr2 (459-503)||(36688892-36688936)
chr2 (412-499)||(27279968-27280055)
chr2 (382-501)||(30099181-30099300)
chr2 (459-514)||(30099181-30099236)
chr2 (383-513)||(12337937-12338067)
chr2 (459-513)||(16044317-16044371)
chr2 (395-441)||(31951399-31951445)
chr2 (382-427)||(10069293-10069338)
chr2 (398-455)||(13952549-13952606)
chr2 (398-455)||(14093756-14093813)
chr2 (395-427)||(8349478-8349510)
[»] chr7 (42 HSPs)
chr7 (382-514)||(28469480-28469612)
chr7 (382-518)||(1738446-1738582)
chr7 (382-514)||(38063912-38064044)
chr7 (382-517)||(7240745-7240880)
chr7 (383-517)||(22285695-22285829)
chr7 (383-515)||(46840858-46840990)
chr7 (382-521)||(7482224-7482363)
chr7 (382-517)||(9268752-9268887)
chr7 (389-476)||(25018370-25018457)
chr7 (382-520)||(7240748-7240886)
chr7 (382-520)||(7482218-7482356)
chr7 (383-513)||(36016196-36016326)
chr7 (382-514)||(9268755-9268887)
chr7 (382-514)||(4790247-4790379)
chr7 (382-513)||(36583395-36583526)
chr7 (382-516)||(1738444-1738578)
chr7 (459-513)||(9575485-9575539)
chr7 (383-513)||(23314139-23314269)
chr7 (383-513)||(31319399-31319529)
chr7 (459-513)||(38441536-38441590)
chr7 (383-504)||(94318-94439)
chr7 (398-515)||(1565744-1565861)
chr7 (398-503)||(7661091-7661196)
chr7 (382-514)||(1565728-1565860)
chr7 (460-504)||(40840128-40840172)
chr7 (382-513)||(22285698-22285829)
chr7 (382-513)||(46840859-46840990)
chr7 (382-516)||(38063910-38064044)
chr7 (459-504)||(33418452-33418497)
chr7 (459-516)||(36583471-36583528)
chr7 (382-514)||(4790247-4790379)
chr7 (458-514)||(28536826-28536882)
chr7 (383-503)||(36016206-36016326)
chr7 (462-513)||(28411051-28411102)
chr7 (459-501)||(94330-94372)
chr7 (383-504)||(7269414-7269535)
chr7 (460-514)||(7661075-7661129)
chr7 (463-513)||(23314139-23314189)
chr7 (458-516)||(24710744-24710802)
chr7 (459-513)||(31319399-31319453)
chr7 (382-439)||(7661150-7661207)
chr7 (459-519)||(28536745-28536805)
[»] scaffold0171 (1 HSPs)
scaffold0171 (395-504)||(12365-12474)
[»] chr6 (40 HSPs)
chr6 (382-503)||(14936456-14936577)
chr6 (382-520)||(13853592-13853730)
chr6 (382-499)||(5685353-5685470)
chr6 (399-507)||(4251315-4251423)
chr6 (402-504)||(6068959-6069061)
chr6 (383-516)||(8382969-8383102)
chr6 (382-513)||(8417793-8417924)
chr6 (382-514)||(11572144-11572276)
chr6 (383-514)||(2830334-2830465)
chr6 (382-513)||(6330115-6330246)
chr6 (382-513)||(26602323-26602454)
chr6 (401-504)||(31849589-31849691)
chr6 (382-514)||(8099529-8099661)
chr6 (382-514)||(35031000-35031132)
chr6 (396-498)||(6549896-6549997)
chr6 (382-520)||(9644689-9644827)
chr6 (382-520)||(9650706-9650844)
chr6 (459-520)||(8099606-8099667)
chr6 (459-516)||(26602399-26602456)
chr6 (382-515)||(33052793-33052926)
chr6 (459-515)||(9644772-9644828)
chr6 (459-515)||(9650789-9650845)
chr6 (382-514)||(11572144-11572276)
chr6 (382-514)||(35031000-35031132)
chr6 (382-513)||(2830334-2830465)
chr6 (459-514)||(6330191-6330246)
chr6 (382-513)||(8382969-8383100)
chr6 (459-514)||(13853592-13853647)
chr6 (459-514)||(28747133-28747188)
chr6 (458-515)||(8186367-8186424)
chr6 (459-504)||(22896538-22896583)
chr6 (458-514)||(3788112-3788168)
chr6 (459-514)||(6068642-6068697)
chr6 (382-437)||(3788113-3788168)
chr6 (383-518)||(8417793-8417928)
chr6 (459-513)||(17992064-17992118)
chr6 (382-504)||(33052803-33052925)
chr6 (459-504)||(8186443-8186488)
chr6 (458-514)||(6143553-6143609)
chr6 (466-506)||(14003076-14003116)
[»] chr8 (49 HSPs)
chr8 (382-501)||(30171494-30171613)
chr8 (382-524)||(54611-54753)
chr8 (398-477)||(12300510-12300589)
chr8 (382-513)||(32114474-32114605)
chr8 (382-516)||(2890161-2890295)
chr8 (383-513)||(3304278-3304408)
chr8 (382-515)||(7785777-7785910)
chr8 (382-519)||(43199353-43199490)
chr8 (386-461)||(4460525-4460600)
chr8 (380-519)||(8587164-8587303)
chr8 (383-513)||(6552655-6552785)
chr8 (382-515)||(7805698-7805831)
chr8 (382-514)||(12763653-12763785)
chr8 (382-514)||(32211362-32211494)
chr8 (382-514)||(43199353-43199485)
chr8 (382-513)||(39571202-39571333)
chr8 (382-513)||(44498186-44498317)
chr8 (382-516)||(7785775-7785909)
chr8 (469-519)||(27422276-27422326)
chr8 (383-513)||(31654613-31654743)
chr8 (459-515)||(7012247-7012303)
chr8 (459-504)||(12343149-12343194)
chr8 (383-516)||(33289261-33289394)
chr8 (382-514)||(54611-54743)
chr8 (382-514)||(2890161-2890293)
chr8 (393-513)||(12343150-12343270)
chr8 (382-514)||(25600999-25601131)
chr8 (459-515)||(39571201-39571257)
chr8 (459-513)||(6552731-6552785)
chr8 (382-516)||(7805696-7805830)
chr8 (458-504)||(28463620-28463666)
chr8 (383-513)||(31654613-31654743)
chr8 (459-513)||(33289261-33289315)
chr8 (459-517)||(44498183-44498241)
chr8 (458-515)||(4245656-4245713)
chr8 (382-515)||(12763652-12763785)
chr8 (381-515)||(32211361-32211495)
chr8 (459-515)||(24692054-24692110)
chr8 (458-513)||(15888427-15888482)
chr8 (398-501)||(17006923-17007026)
chr8 (398-501)||(17570221-17570324)
chr8 (459-514)||(25600999-25601054)
chr8 (459-513)||(3304278-3304332)
chr8 (459-504)||(15688039-15688084)
chr8 (459-504)||(33057670-33057715)
chr8 (383-415)||(3236447-3236479)
chr8 (459-499)||(15888366-15888406)
chr8 (459-515)||(32114473-32114529)
chr8 (467-499)||(40355249-40355281)
[»] chr3 (58 HSPs)
chr3 (398-498)||(53275310-53275410)
chr3 (383-514)||(34988074-34988205)
chr3 (383-516)||(21295326-21295459)
chr3 (382-514)||(46208029-46208161)
chr3 (382-520)||(8817385-8817523)
chr3 (382-519)||(4238588-4238725)
chr3 (383-516)||(34080030-34080163)
chr3 (383-520)||(38964385-38964522)
chr3 (383-515)||(9213514-9213646)
chr3 (382-514)||(49823380-49823512)
chr3 (382-513)||(10297979-10298110)
chr3 (383-514)||(19557052-19557183)
chr3 (382-517)||(22721927-22722062)
chr3 (386-515)||(9111497-9111626)
chr3 (383-516)||(42170346-42170479)
chr3 (383-519)||(2787832-2787968)
chr3 (382-514)||(4238593-4238725)
chr3 (383-515)||(17653712-17653844)
chr3 (382-521)||(8437417-8437556)
chr3 (382-513)||(17653712-17653843)
chr3 (382-513)||(37508921-37509052)
chr3 (383-514)||(37508921-37509052)
chr3 (382-513)||(51406673-51406804)
chr3 (396-498)||(25394352-25394454)
chr3 (459-513)||(38964468-38964522)
chr3 (382-504)||(40690995-40691117)
chr3 (383-513)||(48340397-48340527)
chr3 (398-515)||(44785411-44785528)
chr3 (459-515)||(10298055-10298111)
chr3 (459-515)||(40690994-40691050)
chr3 (382-514)||(46208029-46208161)
chr3 (382-514)||(49823380-49823512)
chr3 (459-518)||(8817381-8817440)
chr3 (382-513)||(19557052-19557183)
chr3 (458-513)||(35513473-35513528)
chr3 (382-513)||(44785396-44785527)
chr3 (459-513)||(2131748-2131802)
chr3 (459-513)||(21295326-21295380)
chr3 (382-504)||(22721930-22722052)
chr3 (459-513)||(34080030-34080084)
chr3 (386-516)||(42507358-42507488)
chr3 (382-504)||(42507364-42507486)
chr3 (459-513)||(48340473-48340527)
chr3 (454-515)||(9027140-9027201)
chr3 (459-504)||(9111503-9111548)
chr3 (459-514)||(8437501-8437556)
chr3 (459-503)||(42170356-42170400)
chr3 (459-514)||(51406749-51406804)
chr3 (459-513)||(2787832-2787886)
chr3 (467-521)||(6013328-6013382)
chr3 (459-501)||(33942944-33942986)
chr3 (382-502)||(9213515-9213635)
chr3 (382-427)||(36095766-36095811)
chr3 (459-516)||(45652066-45652123)
chr3 (459-517)||(55249926-55249986)
chr3 (395-439)||(31757435-31757479)
chr3 (458-502)||(33128217-33128261)
chr3 (458-514)||(36095755-36095811)
[»] scaffold0204 (2 HSPs)
scaffold0204 (382-517)||(23781-23916)
scaffold0204 (382-519)||(23784-23921)
[»] chr4 (62 HSPs)
chr4 (382-517)||(48336259-48336394)
chr4 (382-515)||(41469765-41469898)
chr4 (383-520)||(47833604-47833741)
chr4 (382-516)||(3992973-3993107)
chr4 (383-513)||(20538686-20538816)
chr4 (383-516)||(3372118-3372251)
chr4 (383-516)||(42797729-42797862)
chr4 (459-520)||(47838610-47838671)
chr4 (383-517)||(51894582-51894716)
chr4 (459-516)||(41469763-41469820)
chr4 (382-506)||(33621803-33621927)
chr4 (382-514)||(47838616-47838748)
chr4 (459-518)||(3422136-3422195)
chr4 (400-514)||(24393837-24393951)
chr4 (395-498)||(31013036-31013138)
chr4 (225-340)||(46089803-46089918)
chr4 (382-513)||(53337370-53337501)
chr4 (459-513)||(4780371-4780425)
chr4 (383-513)||(6121893-6122023)
chr4 (382-513)||(43900548-43900679)
chr4 (382-519)||(48336262-48336399)
chr4 (382-514)||(3904682-3904814)
chr4 (383-515)||(43900547-43900679)
chr4 (417-513)||(44900080-44900176)
chr4 (398-498)||(50430433-50430533)
chr4 (459-519)||(51894576-51894636)
chr4 (382-513)||(24704370-24704501)
chr4 (382-513)||(47833610-47833741)
chr4 (459-514)||(52756751-52756806)
chr4 (459-513)||(1716301-1716355)
chr4 (458-504)||(5986951-5986997)
chr4 (459-513)||(6121893-6121947)
chr4 (459-513)||(7579386-7579440)
chr4 (458-504)||(17236863-17236909)
chr4 (459-513)||(42797808-42797862)
chr4 (383-513)||(46797725-46797855)
chr4 (383-504)||(4780305-4780425)
chr4 (459-516)||(33621872-33621929)
chr4 (394-455)||(38160383-38160444)
chr4 (133-182)||(46089720-46089769)
chr4 (458-514)||(3904682-3904738)
chr4 (458-514)||(33551200-33551256)
chr4 (395-475)||(38671475-38671555)
chr4 (453-513)||(42286422-42286482)
chr4 (383-501)||(1716301-1716417)
chr4 (382-513)||(3372120-3372251)
chr4 (459-514)||(3993052-3993107)
chr4 (459-514)||(53337446-53337501)
chr4 (459-513)||(20538686-20538740)
chr4 (468-514)||(26231576-26231622)
chr4 (384-514)||(40913190-40913320)
chr4 (458-504)||(41615685-41615731)
chr4 (463-513)||(46797805-46797855)
chr4 (382-504)||(52756684-52756806)
chr4 (382-427)||(24393906-24393951)
chr4 (463-504)||(40913198-40913239)
chr4 (382-427)||(51894668-51894713)
chr4 (458-514)||(7579309-7579365)
chr4 (381-437)||(17236864-17236920)
chr4 (430-494)||(41594673-41594737)
chr4 (466-506)||(45725939-45725979)
chr4 (481-517)||(48196007-48196043)
[»] chr1 (45 HSPs)
chr1 (382-515)||(11897053-11897186)
chr1 (383-517)||(27159358-27159492)
chr1 (383-517)||(44668093-44668227)
chr1 (382-519)||(11897048-11897185)
chr1 (382-516)||(12483625-12483759)
chr1 (382-504)||(14984846-14984968)
chr1 (383-513)||(31842795-31842925)
chr1 (383-513)||(39401966-39402096)
chr1 (398-520)||(40676782-40676904)
chr1 (383-516)||(26471065-26471198)
chr1 (386-514)||(9981646-9981774)
chr1 (383-515)||(11795931-11796063)
chr1 (382-513)||(47216698-47216829)
chr1 (382-520)||(9981646-9981784)
chr1 (390-504)||(12062569-12062682)
chr1 (378-503)||(17556762-17556888)
chr1 (459-516)||(14984913-14984970)
chr1 (383-504)||(44955215-44955336)
chr1 (383-504)||(47777481-47777602)
chr1 (382-514)||(17556751-17556884)
chr1 (382-514)||(34042695-34042827)
chr1 (393-513)||(44955216-44955336)
chr1 (393-513)||(47777481-47777601)
chr1 (382-513)||(1050888-1051019)
chr1 (459-514)||(16448184-16448239)
chr1 (459-514)||(25694395-25694450)
chr1 (382-513)||(27159358-27159489)
chr1 (382-513)||(44668093-44668224)
chr1 (458-520)||(5392221-5392283)
chr1 (459-513)||(11796009-11796063)
chr1 (393-515)||(12043602-12043723)
chr1 (458-516)||(12483703-12483761)
chr1 (459-513)||(31842795-31842849)
chr1 (459-513)||(39401966-39402020)
chr1 (382-516)||(47588334-47588468)
chr1 (398-516)||(47588352-47588470)
chr1 (459-515)||(1050964-1051020)
chr1 (382-513)||(26471065-26471196)
chr1 (459-515)||(34042772-34042828)
chr1 (459-514)||(47216698-47216753)
chr1 (459-520)||(47969771-47969832)
chr1 (413-510)||(38791193-38791289)
chr1 (458-503)||(48050978-48051023)
chr1 (469-513)||(23278087-23278131)
chr1 (447-499)||(44953077-44953129)
[»] chr5 (32 HSPs)
chr5 (382-514)||(13103023-13103155)
chr5 (382-520)||(9395343-9395481)
chr5 (386-515)||(4443958-4444087)
chr5 (382-514)||(13033050-13033182)
chr5 (383-519)||(37148955-37149091)
chr5 (381-515)||(36563536-36563670)
chr5 (459-519)||(9395426-9395486)
chr5 (459-519)||(13103100-13103160)
chr5 (382-514)||(41989406-41989538)
chr5 (382-513)||(23359941-23360072)
chr5 (385-501)||(9188501-9188618)
chr5 (383-516)||(20848071-20848203)
chr5 (459-519)||(13033127-13033187)
chr5 (383-503)||(23359952-23360072)
chr5 (459-519)||(36563532-36563592)
chr5 (459-515)||(41989405-41989461)
chr5 (417-520)||(582982-583085)
chr5 (382-501)||(11795180-11795299)
chr5 (459-514)||(17025700-17025755)
chr5 (458-501)||(27081015-27081058)
chr5 (379-441)||(2629616-2629678)
chr5 (459-513)||(6126900-6126954)
chr5 (415-504)||(11574112-11574201)
chr5 (382-515)||(17025622-17025755)
chr5 (459-514)||(21576022-21576077)
chr5 (382-514)||(37641952-37642085)
chr5 (459-502)||(11795244-11795287)
chr5 (382-513)||(37148955-37149086)
chr5 (459-501)||(9006894-9006936)
chr5 (459-513)||(20848150-20848203)
chr5 (469-519)||(37641947-37641997)
chr5 (463-507)||(5174840-5174884)
[»] scaffold0464 (2 HSPs)
scaffold0464 (382-513)||(6130-6261)
scaffold0464 (459-522)||(6122-6185)
[»] scaffold0482 (2 HSPs)
scaffold0482 (382-515)||(12858-12991)
scaffold0482 (382-516)||(12859-12993)
[»] scaffold0009 (2 HSPs)
scaffold0009 (383-515)||(49503-49635)
scaffold0009 (458-513)||(49580-49635)
[»] scaffold1707 (2 HSPs)
scaffold1707 (398-504)||(1344-1450)
scaffold1707 (459-501)||(1411-1453)
[»] scaffold0650 (1 HSPs)
scaffold0650 (418-514)||(20-115)


Alignment Details
Target: chr2 (Bit Score: 528; Significance: 0; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 528; E-Value: 0
Query Start/End: Original strand, 10 - 565
Target Start/End: Original strand, 23226899 - 23227454
Alignment:
Q  10 gtgagaagaaaggaggagggagaaagagtttgaagttgcttgaggaaccaatttggaggtcttattgtaatggaagaaaatgtggttatgcttataggca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23226899 gtgagaagaaaggaggagggagaaagagtttgaagttgcttgaggaaccaatttggaggtcttattgtaatggaagaaaatgtggttatgcttataggca 23226998  T
Q  110 tgaatgtggatcagaggaatggaagatattgaaagctgtcgaacctatttcaatgggtgctggtgtgttgccaatgccaagtagtgggaatggaggtgag 209  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23226999 tgaatgtggatcagaggaatggaagatattgaaagctgtggaacctatttcaatgggtgctggtgtgttgccaatgccaagtagtgggaatggaggtgag 23227098  T
Q  210 tttgaaggtgagctcatgtatatgagagctaagtatgagagggttattgggtctaaagattctgaagctttctacatgatgaaccctgttggtagtggtg 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23227099 tttgaaggtgagctcatgtatatgagagctaagtatgagagggttattgggtctaaagattctgaagctttctacatgatgaaccatgttggtagtggtg 23227198  T
Q  310 gtcctgaactcagcctttacttgcttagagtataacataggcaatgcatatgtattggcgtcgacaaccaacatactccctctggtcatatttataagaa 409  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23227199 gtcctgaactcagcctttacttgcttagagtttaacataggcaatgtatatgtattggcgtcgacaaccagcatactccctctggtcatatttataagaa 23227298  T
Q  410 atatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaagga 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23227299 atatttaggtcaacaaaatgtgatgtatctgactaagaatttggaccaaatacatcaacttttgttgaccaaaatgtctcttataaataggactgaagga 23227398  T
Q  510 agtattattttgtcgtatctctatgacatggatcaagtacgttgttgtatgtgttt 565  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23227399 agtattattttgtcgtatctctatgacatggatcaagtacgttgttgtatgtgttt 23227454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 400 - 516
Target Start/End: Complemental strand, 14740580 - 14740464
Alignment:
Q  400 tttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaatag 499  Q
    ||||||||||| ||||| |||||| ||||||||||||||||  ||| |||||||||  ||||||| | |||||||||||  |||| ||||||||| ||||    
T  14740580 tttataagaaacatttaagtcaactaaatgtgatgtatctggttaaaaatttggacgaaatacattaccttttgttgacacaaatatctcttatatatag 14740481  T
Q  500 gaccgaaggaagtatta 516  Q
    || |||||| |||||||    
T  14740480 gatcgaagggagtatta 14740464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 13724102 - 13724234
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| |||||| |||| | || |||||||||||||  |||||||| ||  ||| || |||||||  |||||||||||||||||||||| |    
T  13724102 tactccctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccaga 13724201  T
Q  483 atgtctcttataaataggaccgaaggaagtatt 515  Q
    || || |||||||||||||| | ||| ||||||    
T  13724202 atatcgcttataaataggactgtagggagtatt 13724234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 520
Target Start/End: Original strand, 41478638 - 41478776
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  41478638 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41478737  T
Q  482 aatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||| ||||||||||||||||||| ||| |||||| ||||    
T  41478738 aatttctcttataaataggaccggaggtagtattttttt 41478776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 515
Target Start/End: Original strand, 37990012 - 37990145
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  37990012 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 37990111  T
Q  482 aatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||| ||||||||||||||||||| ||| ||||||    
T  37990112 aatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 3055689 - 3055557
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  3055689 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 3055590  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| ||| |||||    
T  3055589 aatttctcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 519
Target Start/End: Complemental strand, 15372356 - 15372220
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  15372356 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaa 15372257  T
Q  483 atgtctcttataaataggaccgaaggaagtattattt 519  Q
    || ||||||||||||||||| | ||| ||||||||||    
T  15372256 atttctcttataaataggactggagggagtattattt 15372220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 519
Target Start/End: Complemental strand, 15896972 - 15896836
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  15896972 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 15896873  T
Q  483 atgtctcttataaataggaccgaaggaagtattattt 519  Q
    || ||||||||||||||||||| ||| ||||| ||||    
T  15896872 atttctcttataaataggaccggaggtagtataattt 15896836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 44398817 - 44398685
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  44398817 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 44398718  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| ||| |||||    
T  44398717 aatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 13197710 - 13197840
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  13197710 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 13197809  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  13197810 atttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 508
Target Start/End: Original strand, 41492895 - 41493021
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| | |||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  41492895 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgaccta 41492994  T
Q  482 aatgtctcttataaataggaccgaagg 508  Q
    ||| ||| ||||||||||||| |||||    
T  41492995 aatttcttttataaataggactgaagg 41493021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 6648573 - 6648512
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||||||||    
T  6648573 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattatttt 6648512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 499
Target Start/End: Complemental strand, 20900779 - 20900678
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    |||||| |||| ||| ||||||||||||||  ||| |||||||  | | |||||||||   ||||||||||||||| ||||| |||||||||||||||||    
T  20900779 tatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatacatcaacttttgctgacccaaatgtctcttataaat 20900680  T
Q  498 ag 499  Q
    ||    
T  20900679 ag 20900678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 459 - 516
Target Start/End: Complemental strand, 41492950 - 41492893
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||||    
T  41492950 atacatcaacttttgttgacccaaatttctcttataaataggaccggagggagtatta 41492893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 44397678 - 44397546
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||| | |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  44397678 atactccccccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 44397579  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| ||| |||||    
T  44397578 aatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 514
Target Start/End: Original strand, 44398682 - 44398817
Alignment:
Q  379 aacatactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgtt 475  Q
    |||||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| |||||||||||||||||    
T  44398682 aacatactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgtt 44398778  T
Q  476 gaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||| |||  ||||||||||||||||||| ||| |||||    
T  44398779 gacccaaaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 413 - 515
Target Start/End: Complemental strand, 12320272 - 12320171
Alignment:
Q  413 tttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagt 512  Q
    |||||||||||||||||| |||||| ||  ||||| ||| |||| ||||||||||| ||| |||| | ||||| ||||||||||||||| |  |||||||    
T  12320272 tttaggtcaacaaaatgtaatgtatttggttaagagtttagaccaaatacatcaac-tttattgatctaaatgactcttataaataggatcataggaagt 12320174  T
Q  513 att 515  Q
    |||    
T  12320173 att 12320171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 393 - 519
Target Start/End: Complemental strand, 16243903 - 16243777
Alignment:
Q  393 ggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgaccaaaatgtctc 489  Q
    |||| ||||||||||||| |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||| |||  ||||    
T  16243903 ggtcctatttataagaaaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgacccaaaattctc 16243807  T
Q  490 ttataaataggaccgaaggaagtattattt 519  Q
    ||||||||||||||| | | ||||||||||    
T  16243806 ttataaataggaccggatggagtattattt 16243777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 41478770 - 41478636
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  41478770 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 41478674  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    | |||  ||||||||||||||||||| ||| |||||||    
T  41478673 ccaaaattctcttataaataggaccggagggagtatta 41478636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 515
Target Start/End: Original strand, 3055557 - 3055690
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  3055557 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 3055653  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    | |||  ||||||||||||||||||| ||| ||||||    
T  3055654 ccaaaattctcttataaataggaccggagggagtatt 3055690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 516
Target Start/End: Complemental strand, 9047809 - 9047752
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||||    
T  9047809 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatta 9047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 13197764 - 13197703
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||| ||||||    
T  13197764 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtagtatttt 13197703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 515
Target Start/End: Complemental strand, 37990144 - 37990011
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  37990144 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 37990048  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    | |||  ||||||||||||||||||| ||| ||||||    
T  37990047 ccaaaattctcttataaataggaccggagggagtatt 37990011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 504
Target Start/End: Original strand, 44397543 - 44397668
Alignment:
Q  379 aacatactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgtt 475  Q
    |||||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| |||||||||||||||||    
T  44397543 aacatactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgtt 44397639  T
Q  476 gaccaaaatgtctcttataaataggaccg 504  Q
    |||| |||  |||||||||||||||||||    
T  44397640 gacccaaaattctcttataaataggaccg 44397668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 38917521 - 38917653
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  |||||| |||||| |    
T  38917521 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgaccta 38917620  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| | ||||||||||||||||| ||| |||||    
T  38917621 aatttatcttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 513
Target Start/End: Complemental strand, 13724157 - 13724102
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||| ||| ||||    
T  13724157 aatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 15896841 - 15896972
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  15896841 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 15896937  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||||||||||||||||||| ||| ||||    
T  15896938 ccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 37666609 - 37666740
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| ||||||| |||  ||||||||||   ||| ||||  |  | |||||||  ||||||||||||| |    
T  37666609 atactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgaccta 37666708  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  37666709 aatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 514
Target Start/End: Complemental strand, 38917576 - 38917521
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||    
T  38917576 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 7680697 - 7680647
Alignment:
Q  466 aacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||||||||||||||||||||||| |||  ||||||||||||| ||||||||    
T  7680697 aacttttgttgaccaaaatgtcttttaataataggaccgaagaaagtatta 7680647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 504
Target Start/End: Original strand, 9047754 - 9047876
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  |||||| |||||| |    
T  9047754 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgaccta 9047853  T
Q  482 aatgtctcttataaataggaccg 504  Q
    ||| ||||||||||||| |||||    
T  9047854 aatttctcttataaatatgaccg 9047876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 513
Target Start/End: Original strand, 11582696 - 11582761
Alignment:
Q  447 aatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    |||||||||| |||||||||| |||  |||| ||||||| |||||||||||||| ||||||||||||    
T  11582696 aatttggaccaaatacatcaattttcattgatcaaaatg-ctcttataaataggtccgaaggaagta 11582761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 520
Target Start/End: Complemental strand, 12170454 - 12170392
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    |||||||||||||||||||||| || | ||||||||||||| || || | |||||||||||||    
T  12170454 aatacatcaacttttgttgacccaagtttctcttataaataagatcggatgaagtattatttt 12170392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 12337991 - 12337937
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  12337991 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 15372302 - 15372356
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  15372302 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 16044317 - 16044447
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| ||||||| |||  ||||||||||   ||| ||||  |  | |||||||  ||||||||||||| ||    
T  16044317 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaa 16044416  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  16044417 atttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 504
Target Start/End: Original strand, 16243782 - 16243904
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||||| || |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  16243782 atactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 16243881  T
Q  482 aatgtctcttataaataggaccg 504  Q
    ||| | |||||||||||||||||    
T  16243882 aatttttcttataaataggaccg 16243904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 501
Target Start/End: Original strand, 30985772 - 30985810
Alignment:
Q  463 atcaacttttgttgaccaaaatgtctcttataaatagga 501  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  30985772 atcaacttttgttgaccaaaatgtctgttataaatagga 30985810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 439
Target Start/End: Original strand, 3243129 - 3243170
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatct 439  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  3243129 tatttataagaaacatttaggtcaactaaatgtgatgtatct 3243170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 515
Target Start/End: Complemental strand, 13344615 - 13344482
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| | |||||||||  ||||||||||   ||| ||||  | || |||||||  | ||||||||||| |    
T  13344615 atactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 13344516  T
Q  482 aatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||| |||||||||||||| |||| ||| ||||||    
T  13344515 aatttctcttataaatagaaccggaggtagtatt 13344482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 516
Target Start/End: Complemental strand, 37666664 - 37666607
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||||||||||||| ||||||| |||  ||||||||||||||||||| ||| |||||||    
T  37666664 atacatcaactttagttgacccaaaattctcttataaataggaccggagggagtatta 37666607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 514
Target Start/End: Original strand, 4684007 - 4684063
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||||| ||| |||||    
T  4684007 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 13344560 - 13344615
Alignment:
Q  459 atacatcaacttttgttga-ccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||    
T  13344560 atacatcaacttttgttgatccaaaat-tctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 340
Target Start/End: Complemental strand, 24009571 - 24009447
Alignment:
Q  216 ggtgagctcatgtatatgagagctaagtatgagagggttattgggtctaaagattctgaagctttctacatgatgaaccctgttggtagtggtggtcctg 315  Q
    ||||| || ||||| ||||| || |||| ||||||  || ||||||||| ||| |||||||||||||| |||||||| |||| | | | ||||| |||||    
T  24009571 ggtgaacttatgtacatgagggcaaagtttgagagaattgttgggtctagagactctgaagctttctatatgatgaatcctgatagcaatggtgttcctg 24009472  T
Q  316 aactcagcctttacttgcttagagt 340  Q
    | || ||  |||| |||||||||||    
T  24009471 agcttagtatttatttgcttagagt 24009447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 503
Target Start/End: Complemental strand, 36688936 - 36688892
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggacc 503  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||    
T  36688936 atacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 499
Target Start/End: Complemental strand, 27280055 - 27279968
Alignment:
Q  412 atttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaatag 499  Q
    ||||||||||||||||  | |||||||||  ||| |  || ||||  |||||||||||||| |||||| ||||||||| |||||||||    
T  27280055 atttaggtcaacaaaagttaatgtatctggttaaaacattagaccagatacatcaacttttcttgacccaaatgtctcctataaatag 27279968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 501
Target Start/End: Original strand, 30099181 - 30099300
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||| ||| |  ||| |||||||||||  |||||||||| | ||| ||||    || |||||||  | ||||||||||| |    
T  30099181 atactccctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgaccta 30099280  T
Q  482 aatgtctcttataaatagga 501  Q
    ||| ||||||||||||||||    
T  30099281 aatttctcttataaatagga 30099300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 514
Target Start/End: Complemental strand, 30099236 - 30099181
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| |||  ||||| ||||||||||||| ||| |||||    
T  30099236 atacatcaacttttgttgacccaaaattctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 12337937 - 12338067
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  | ||||||||||| ||    
T  12337937 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaa 12338036  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || | |||||||||||| |||| ||| ||||    
T  12338037 atttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 16044371 - 16044317
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||| ||||||| |||  ||||||||||||||||||| ||| ||||    
T  16044371 atacatcaactttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 441
Target Start/End: Original strand, 31951399 - 31951445
Alignment:
Q  395 tcatatttataagaaatatttaggtcaacaaaatgtgatgtatctga 441  Q
    |||||||||||||| |||||| |||||| ||||| ||||||||||||    
T  31951399 tcatatttataagagatattttggtcaataaaatttgatgtatctga 31951445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 10069338 - 10069293
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaa 427  Q
    ||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  10069338 atacttcctctggtactatttttaagaaatatttaggtcaacaaaa 10069293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 455
Target Start/End: Original strand, 13952549 - 13952606
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggac 455  Q
    ||||||||||||| |||||||| |||||||| |||| |||||   |||||||||||||    
T  13952549 tatttataagaaacatttaggttaacaaaatatgatttatcttgttaagaatttggac 13952606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 455
Target Start/End: Original strand, 14093756 - 14093813
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggac 455  Q
    ||||||||||||| |||||||| |||||||| |||| |||||   |||||||||||||    
T  14093756 tatttataagaaacatttaggttaacaaaatatgatttatcttgttaagaatttggac 14093813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 427
Target Start/End: Complemental strand, 8349510 - 8349478
Alignment:
Q  395 tcatatttataagaaatatttaggtcaacaaaa 427  Q
    |||||||||||||||||||||||| ||||||||    
T  8349510 tcatatttataagaaatatttaggccaacaaaa 8349478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 28469612 - 28469480
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||| |    
T  28469612 atactccctctggtcatatttataagaatcatttaggtcaataaaatgtgatgtatctgattaataatttggacctgatacattaacttttgttgaccta 28469513  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||| ||||||||| || |||||| |||||    
T  28469512 aatgtcttttataaataagatcgaagggagtat 28469480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 382 - 518
Target Start/End: Original strand, 1738446 - 1738582
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  1738446 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 1738545  T
Q  482 aatgtctcttataaataggaccgaaggaagtattatt 518  Q
    ||| ||||||||||||||||||| ||| |||||||||    
T  1738546 aatttctcttataaataggaccggaggtagtattatt 1738582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 38063912 - 38064044
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||||||||||||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  38063912 atactccctctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 38064011  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| ||| |||||    
T  38064012 aatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 382 - 517
Target Start/End: Complemental strand, 7240880 - 7240745
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  7240880 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7240781  T
Q  482 aatgtctcttataaataggaccgaaggaagtattat 517  Q
    ||| ||||||||||||||||||| ||| ||||||||    
T  7240780 aatttctcttataaataggaccggaggtagtattat 7240745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 517
Target Start/End: Complemental strand, 22285829 - 22285695
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  22285829 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 22285730  T
Q  483 atgtctcttataaataggaccgaaggaagtattat 517  Q
    || ||||||||||||||||||| ||| ||||||||    
T  22285729 atttctcttataaataggaccggagggagtattat 22285695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 515
Target Start/End: Complemental strand, 46840990 - 46840858
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  46840990 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46840891  T
Q  483 atgtctcttataaataggaccgaaggaagtatt 515  Q
    || ||||||||||||||||||| ||| ||||||    
T  46840890 atttctcttataaataggaccggaggtagtatt 46840858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 382 - 521
Target Start/End: Original strand, 7482224 - 7482363
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctga-ctaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| ||| ||  ||||||  | ||| ||||||||||||||||||||    
T  7482224 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttgaact--gaatttttaactagatacatcaacttttgttgac 7482320  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtattattttg 521  Q
    | |||  ||||||||||||||||||| ||| ||||||||||||    
T  7482321 ccaaaattctcttataaataggaccggagggagtattattttg 7482363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 382 - 517
Target Start/End: Complemental strand, 9268887 - 9268752
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  9268887 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 9268788  T
Q  482 aatgtctcttataaataggaccgaaggaagtattat 517  Q
    ||| ||||||||||||||||||  ||| ||||||||    
T  9268787 aatttctcttataaataggaccagaggtagtattat 9268752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 389 - 476
Target Start/End: Original strand, 25018370 - 25018457
Alignment:
Q  389 ctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttg 476  Q
    |||||||| ||||| ||||||| ||||| ||||| ||||||| |||||||||  ||||||| | |||| |||||||||||||||||||    
T  25018370 ctctggtcctatttgtaagaaacatttatgtcaataaaatgttatgtatctggttaagaatgttgaccaaatacatcaacttttgttg 25018457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 520
Target Start/End: Original strand, 7240748 - 7240886
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  7240748 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 7240844  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    | |||  ||||||||||||||||||| ||| |||||||||||    
T  7240845 ccaaaattctcttataaataggaccggagggagtattatttt 7240886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 520
Target Start/End: Complemental strand, 7482356 - 7482218
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  |  | |||||||  ||||||||||||| |    
T  7482356 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgaccta 7482257  T
Q  482 aatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||| ||||||||||||||||||| ||| ||||| |||||    
T  7482256 aatttctcttataaataggaccggaggtagtataatttt 7482218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 36016196 - 36016326
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    |||||| ||||||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  36016196 tactccatctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 36016295  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  36016296 atttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 9268755 - 9268887
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| ||||||||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  9268755 atactacctctggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 9268851  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    | |||  ||||||||||||||||||| ||| |||||    
T  9268852 ccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 4790247 - 4790379
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctg-actaagaatttggaccta-atacatcaacttttgttgacc 479  Q
    ||||| |||| |||| ||||||||||||| ||||||||||||||||    |||||| || |||||  ||||  | ||| |||||||||||||| ||||||    
T  4790247 atactacctccggtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaa--atttttaactagatacatcaacttttattgacc 4790344  T
Q  480 aaaatgtctcttataaataggaccgaaggaagtat 514  Q
     |||  ||||||||||||||||||| |||||||||    
T  4790345 caaaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 36583526 - 36583395
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| | || ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  36583526 atactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgaccta 36583427  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  36583426 aatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 1738578 - 1738444
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  1738578 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 1738482  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    | |||  ||||||||||||||||||| ||| |||||||    
T  1738481 ccaaaattctcttataaataggaccggagggagtatta 1738444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 9575485 - 9575539
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||||||| ||||    
T  9575485 atacatcaagttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 23314139 - 23314269
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  |||| |||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  23314139 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23314238  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  23314239 atttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 31319399 - 31319529
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||  ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  31319399 tactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31319498  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  31319499 atttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 38441536 - 38441590
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||||||||    
T  38441536 atacatcaacttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 504
Target Start/End: Original strand, 94318 - 94439
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| | || ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  94318 tactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaa 94417  T
Q  483 atgtctcttataaataggaccg 504  Q
    || |||||||||||||||||||    
T  94418 atttctcttataaataggaccg 94439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 515
Target Start/End: Original strand, 1565744 - 1565861
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |||| ||||||||||||    
T  1565744 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 1565843  T
Q  498 aggaccgaaggaagtatt 515  Q
    ||||||| ||| ||||||    
T  1565844 aggaccggaggtagtatt 1565861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 503
Target Start/End: Original strand, 7661091 - 7661196
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    ||||||||||| | ||||| ||||| ||||  ||||||| |||   || || ||||||   ||||||||||||||||||||| ||||||||| |||||||    
T  7661091 tatttataagagaaatttatgtcaataaaagttgatgtagctggtaaaaaaattggactagatacatcaacttttgttgacccaaatgtctcatataaat 7661190  T
Q  498 aggacc 503  Q
    ||||||    
T  7661191 aggacc 7661196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 1565860 - 1565728
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  1565860 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 1565764  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    | |||  |||||||||||||| |||||||| |||||    
T  1565763 ccaaaattctcttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 460 - 504
Target Start/End: Complemental strand, 40840172 - 40840128
Alignment:
Q  460 tacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  40840172 tacatcaacttttgttgacaaaaatttctcttataaataggaccg 40840128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 22285698 - 22285829
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    |||||||||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  |  || ||||||||||||||||||||    
T  22285698 atactccctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaaatagatacatcaacttttgttgac 22285794  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||||||||||||||||||| ||| ||||    
T  22285795 ccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 46840859 - 46840990
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  46840859 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 46840955  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||||||||||||||||||| ||| ||||    
T  46840956 ccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 38064044 - 38063910
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  38064044 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 38063948  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    | |||  ||||||||||||||||||  ||| |||||||    
T  38063947 ccaaaattctcttataaataggaccagagggagtatta 38063910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 504
Target Start/End: Original strand, 33418452 - 33418497
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||    
T  33418452 atacatcaacttttgttgacccaaaattctcttataaataggaccg 33418497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 516
Target Start/End: Original strand, 36583471 - 36583528
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||||||||||||||||||||| |||  |||||||||||||||| || ||| |||||||    
T  36583471 atacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtatta 36583528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 4790379 - 4790247
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||| |||| |||| ||||||||||| |  ||| |||||| ||||  ||||||||||   ||| ||||| | || |||||||  | ||||||||||| |    
T  4790379 atacttcctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgaccta 4790280  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| | ||||||||||||||||| ||| |||||    
T  4790279 aatttttcttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 514
Target Start/End: Original strand, 28536826 - 28536882
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||||| ||| |||||    
T  28536826 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 503
Target Start/End: Complemental strand, 36016326 - 36016206
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtg-atgtatct-gactaagaatttggaccta-atacatcaacttttgttgacc 479  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||| ||| |||||| | ||||  ||||||  |  || |||||||||||||||||||||    
T  36016326 tactccctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaaatagatacatcaacttttgttgacc 36016230  T
Q  480 aaaatgtctcttataaataggacc 503  Q
     |||  ||||||||||||||||||    
T  36016229 caaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 513
Target Start/End: Original strand, 28411051 - 28411102
Alignment:
Q  462 catcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||| ||||||  ||| || |||||||||||||||||||||||||    
T  28411051 catcaacttttattgacccgaatttcccttataaataggaccgaaggaagta 28411102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 94372 - 94330
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaatagga 501  Q
    ||||||||||||||||||||| |||  ||||||||||||||||    
T  94372 atacatcaacttttgttgacccaaaattctcttataaatagga 94330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 504
Target Start/End: Complemental strand, 7269535 - 7269414
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatct-gactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||||||| |||| ||||||||||||| | || |||||||||||  ||||||||||  ||| | | |||  |||  || |||||||||||||| ||| |    
T  7269535 tactccctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatctaaactga-atttttaaccagatgcatcaacttttgttaaccca 7269437  T
Q  482 aatgtctcttataaataggaccg 504  Q
    | | |||||||||||||||||||    
T  7269436 actttctcttataaataggaccg 7269414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 514
Target Start/End: Complemental strand, 7661129 - 7661075
Alignment:
Q  460 tacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||| |||||  |||| |||||||||||||||| |||||| |||||    
T  7661129 tacatcaacttttattgacataaatttctcttataaataggatcgaagggagtat 7661075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 513
Target Start/End: Complemental strand, 23314189 - 23314139
Alignment:
Q  463 atcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  23314189 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 516
Target Start/End: Original strand, 24710744 - 24710802
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    |||||||||||||||||||||| |  ||||| ||||||| ||||||| ||| |||||||    
T  24710744 aatacatcaacttttgttgacccagttgtcttttataaaaaggaccggagggagtatta 24710802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 31319453 - 31319399
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  |||||||||||||| |||| ||| ||||    
T  31319453 atacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 439
Target Start/End: Complemental strand, 7661207 - 7661150
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatct 439  Q
    ||||||||||||||| |||||||| || | |||| |||||||||||  ||||||||||    
T  7661207 atactccctctggtcctatttatatgagacatttgggtcaacaaaagttgatgtatct 7661150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 519
Target Start/End: Complemental strand, 28536805 - 28536745
Alignment:
Q  459 atacatcaacttttgttga-ccaaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||||| ||| ||||| ||||    
T  28536805 atacatcaacttttattgatccaaaat-tctcttataaataggaccggagggagtatcattt 28536745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 12365 - 12474
Alignment:
Q  395 tcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttata 494  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||  ||||||||| |||| || ||| |||||||| ||||||||||| |||||||||    
T  12365 tcatgtttataagaaacattcaggtcaacaaaatgtgatgtatctggttaagaatttagaccaaacacaccaactttttttgaccaaaatatctcttata 12464  T
Q  495 aataggaccg 504  Q
    ||||||||||    
T  12465 aataggaccg 12474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 7e-29; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 382 - 503
Target Start/End: Original strand, 14936456 - 14936577
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||||||||||||| ||| || |||||| |||||||||||||||| |||||||||||   ||||||||||  || |||||||||||| ||||||||| |    
T  14936456 atactccctctggtcctatatagaagaaacatttaggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgaccca 14936555  T
Q  482 aatgtctcttataaataggacc 503  Q
    ||| ||||||||||||||||||    
T  14936556 aatatctcttataaataggacc 14936577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 382 - 520
Target Start/End: Original strand, 13853592 - 13853730
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  13853592 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 13853691  T
Q  482 aatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||| ||||||||||||||||||||||| |||||||||||    
T  13853692 aatttctcttataaataggaccgaaggtagtattatttt 13853730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 499
Target Start/End: Complemental strand, 5685470 - 5685353
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||||| ||||||| ||||||||||||| |||| ||||| |||||| ||||||| ||   ||| ||||||| || |||||||||||||||||||||| |    
T  5685470 atactccatctggtcttatttataagaaacatttgggtcagcaaaatatgatgtaacttgttaataatttggtccaaatacatcaacttttgttgaccca 5685371  T
Q  482 aatgtctcttataaatag 499  Q
    ||||| | |||| |||||    
T  5685370 aatgttttttattaatag 5685353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 507
Target Start/End: Complemental strand, 4251423 - 4251315
Alignment:
Q  399 atttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaata 498  Q
    |||||||||||| ||||||||||| ||||||||||||||||   |||||||||||| | | ||| | |||||||||||||  |||| |||||| ||||||    
T  4251423 atttataagaaacatttaggtcaataaaatgtgatgtatctagttaagaatttggatcaagtacgttaacttttgttgactcaaatttctcttgtaaata 4251324  T
Q  499 ggaccgaag 507  Q
    ||| |||||    
T  4251323 ggatcgaag 4251315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 6068959 - 6069061
Alignment:
Q  402 tataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaatagga 501  Q
    ||||||||||||||||||||||||||  ||| |||||    ||| ||||| |||| ||||||| |||||||||||||| |||| ||| ||||||||||||    
T  6068959 tataagaaatatttaggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaatagga 6069058  T
Q  502 ccg 504  Q
    |||    
T  6069059 ccg 6069061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 383 - 516
Target Start/End: Original strand, 8382969 - 8383102
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  8382969 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 8383068  T
Q  483 atgtctcttataaataggaccgaaggaagtatta 516  Q
    || ||||||||||||||||||| ||| |||||||    
T  8383069 atttctcttataaataggaccggaggtagtatta 8383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 8417924 - 8417793
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctgactaagaatttggaccta-atacatcaacttttgttgacc 479  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||| |||| ||||| ||  |  ||||||  | ||| |||||||||||||||||||||    
T  8417924 atactccctctggtcttatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggatt-gaatttttaactagatacatcaacttttgttgacc 8417827  T
Q  480 aaaatgtctcttataaataggaccgaaggaagta 513  Q
     |||  ||||||||||||||||||||||| ||||    
T  8417826 caaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 11572144 - 11572276
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  11572144 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 11572243  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| ||| |||||    
T  11572244 aatttctcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 383 - 514
Target Start/End: Complemental strand, 2830465 - 2830334
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  2830465 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2830366  T
Q  483 atgtctcttataaataggaccgaaggaagtat 514  Q
    || ||||||||||||||||||| ||| |||||    
T  2830365 atttctcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 6330246 - 6330115
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  6330246 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 6330147  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  6330146 aatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 26602454 - 26602323
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  26602454 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 26602355  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  26602354 aatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 401 - 504
Target Start/End: Complemental strand, 31849691 - 31849589
Alignment:
Q  401 ttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaatagg 500  Q
    |||||| ||| |||||||||||||||| ||||| ||||||  ||||| || | ||  |||||||||||||||||||||| | |||||||||||||||| |    
T  31849691 ttataataaacatttaggtcaacaaaaggtgatttatctggttaaga-ttcgtacaaaatacatcaacttttgttgacccatatgtctcttataaatatg 31849593  T
Q  501 accg 504  Q
    ||||    
T  31849592 accg 31849589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 8099661 - 8099529
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||    || |||||||  ||||||||||||| |    
T  8099661 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgaccta 8099562  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| ||| |||||    
T  8099561 aatttctcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 35031132 - 35031000
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||||| |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||| ||||||||||    
T  35031132 atactacctccggtcctatttataagaaaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaatttttgttgac 35031036  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    | |||  ||||||||||||||||||| |||||||||    
T  35031035 ccaaaattctcttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 6549896 - 6549997
Alignment:
Q  396 catatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataa 495  Q
    ||||| ||||||| | ||||||||||||||||  | |||||| |||  || |||||||||   ||||||||||||||||| |||||||| ||||||||||    
T  6549896 catatatataagagaaatttaggtcaacaaaagttaatgtatttgatgaa-aatttggactagatacatcaacttttgttaaccaaaatatctcttataa 6549994  T
Q  496 ata 498  Q
    |||    
T  6549995 ata 6549997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 520
Target Start/End: Complemental strand, 9644827 - 9644689
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  | || |||||||| |    
T  9644827 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 9644728  T
Q  482 aatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||| ||||||||||||||||||| ||| |||| ||||||    
T  9644727 aatttctcttataaataggaccggaggtagtaatatttt 9644689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 520
Target Start/End: Complemental strand, 9650844 - 9650706
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  | || |||||||| |    
T  9650844 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 9650745  T
Q  482 aatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||| ||||||||||||||||||| ||| |||| ||||||    
T  9650744 aatttctcttataaataggaccggaggtagtaatatttt 9650706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 8099606 - 8099667
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||| ||||    
T  8099606 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattttttt 8099667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 516
Target Start/End: Original strand, 26602399 - 26602456
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||||    
T  26602399 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatta 26602456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 515
Target Start/End: Original strand, 33052793 - 33052926
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||||| || |||| ||||||||||| |  ||| |||||| ||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  33052793 atactccatccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 33052892  T
Q  482 aatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||| ||||||||||||||||||| ||| ||||||    
T  33052893 aatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 9644772 - 9644828
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||    
T  9644772 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9644828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 9650789 - 9650845
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||    
T  9650789 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 9650845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 11572276 - 11572144
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  11572276 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 11572180  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    | |||  ||||||||||||||||||| ||| |||||    
T  11572179 ccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 35031000 - 35031132
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||| |||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  35031000 atacttcctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 35031099  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| | ||||||||||||||||| ||| |||||    
T  35031100 aatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 2830334 - 2830465
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  2830334 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 2830430  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||||||||||||||||||| ||| ||||    
T  2830431 ccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 6330191 - 6330246
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||    
T  6330191 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 8383100 - 8382969
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  8383100 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 8383004  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||||||||||||||||||| ||| ||||    
T  8383003 ccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 514
Target Start/End: Complemental strand, 13853647 - 13853592
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||    
T  13853647 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 514
Target Start/End: Complemental strand, 28747188 - 28747133
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| |||  ||||||||||||||||| ||||| |||||    
T  28747188 atacatcaacttttgttgacccaaaattctcttataaataggactgaagggagtat 28747133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 515
Target Start/End: Complemental strand, 8186424 - 8186367
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||| |||||| ||||||||||| || |||||| || ||||||||||    
T  8186424 aatacatcaacttttattgacccaaatgtctcttgtatataggagcggaggaagtatt 8186367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 504
Target Start/End: Original strand, 22896538 - 22896583
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||    
T  22896538 atacatcaacttttgttgacaaaaaattctcttataaataggaccg 22896583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 514
Target Start/End: Original strand, 3788112 - 3788168
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||||||||||||||||| |||| | ||||||||||| ||||| ||| |||||    
T  3788112 aatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 6068642 - 6068697
Alignment:
Q  459 atacatcaacttttgttgac-caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||| |||||    
T  6068642 atacatcaacttttgttgactcaaaat-tctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 3788168 - 3788113
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtat 437  Q
    |||||||||| |||| ||||||||||| | ||||||||||||||||  ||||||||    
T  3788168 atactccctccggtcttatttataagataaatttaggtcaacaaaagttgatgtat 3788113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 518
Target Start/End: Original strand, 8417793 - 8417928
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||  |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||    || |||||||  ||||||||||||| ||    
T  8417793 tactcccttcggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaa 8417892  T
Q  483 atgtctcttataaataggaccgaaggaagtattatt 518  Q
    || ||||||||||||| ||||  ||| |||||||||    
T  8417893 atttctcttataaataagaccagagggagtattatt 8417928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 17992064 - 17992118
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||| | ||||||||||| |||  ||||||||||||||||||||||| ||||    
T  17992064 atacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 504
Target Start/End: Complemental strand, 33052925 - 33052803
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| |||||||||||||| |||||    
T  33052925 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttattgac 33052829  T
Q  479 caaaatgtctcttataaataggaccg 504  Q
    | |||  |||||||||||||||||||    
T  33052828 ccaaaattctcttataaataggaccg 33052803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 504
Target Start/End: Original strand, 8186443 - 8186488
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    ||||||||||||||||||| | |||| ||| |||||||||||||||    
T  8186443 atacatcaacttttgttgatccaaatttcttttataaataggaccg 8186488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 6143609 - 6143553
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||  ||||||||||||| |||| |||||||||||||||| || ||| |||||    
T  6143609 aatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 14003076 - 14003116
Alignment:
Q  466 aacttttgttgaccaaaatgtctcttataaataggaccgaa 506  Q
    |||||||||||||  |||||||||||||||||| |||||||    
T  14003076 aacttttgttgactcaaatgtctcttataaataagaccgaa 14003116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 7e-26; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 382 - 501
Target Start/End: Complemental strand, 30171613 - 30171494
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgac-ca 480  Q
    ||||||| |||||||  |||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||| | ||||| ||||||||||||| ||    
T  30171613 atactccgtctggtcccatttataagaaacatttaagtcaacaaaatgcgatgtatctgattaagaatttggaccaagtacattaacttttgttgactca 30171514  T
Q  481 aaatgtctcttataaatagga 501  Q
    |||| |||||| |||||||||    
T  30171513 aaat-tctcttgtaaatagga 30171494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 382 - 524
Target Start/End: Original strand, 54611 - 54753
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  54611 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 54710  T
Q  482 aatgtctcttataaataggaccgaaggaagtattattttgtcg 524  Q
    ||| ||||||||||||||||||| ||| |||||||||| ||||    
T  54711 aatttctcttataaataggaccggaggtagtattatttagtcg 54753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 477
Target Start/End: Original strand, 12300510 - 12300589
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttga 477  Q
    ||||| ||||||| |||||  ||||||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  12300510 tatttttaagaaacatttatttcaacaaaatgtgatgtatctgattaagaatttgaaccaaatagatcaacttttgttga 12300589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 32114474 - 32114605
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| |||||||||||||  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  32114474 atactccctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 32114573  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  32114574 aatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 516
Target Start/End: Original strand, 2890161 - 2890295
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  2890161 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 2890260  T
Q  482 aatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||| ||||||||||||||||||| ||| |||||||    
T  2890261 aatttctcttataaataggaccggaggtagtatta 2890295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 3304278 - 3304408
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| |||||||||||||  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  3304278 tactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3304377  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  3304378 atttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 515
Target Start/End: Original strand, 7785777 - 7785910
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  7785777 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7785876  T
Q  482 aatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||| ||||||||||||||||||| ||| ||||||    
T  7785877 aatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 519
Target Start/End: Original strand, 43199353 - 43199490
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  43199353 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 43199452  T
Q  482 aatgtctcttataaataggaccgaaggaagtattattt 519  Q
    ||| ||||||||||||||||||| ||| ||||| ||||    
T  43199453 aatttctcttataaataggaccggaggtagtataattt 43199490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 461
Target Start/End: Complemental strand, 4460600 - 4460525
Alignment:
Q  386 tccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaata 461  Q
    |||||| |||| ||| | ||||||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||    
T  4460600 tccctccggtcctatatttaagaaacatttcggtcaacaaaatgtgatgtatctgattaagaatttggaccaaata 4460525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 380 - 519
Target Start/End: Complemental strand, 8587303 - 8587164
Alignment:
Q  380 acatactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgacc 479  Q
    ||||||| |||| |||| ||||||||||| | | ||  ||||| ||||  ||||||||||   ||| ||||| | |  ||||||||||||||||||||||    
T  8587303 acatacttcctccggtcttatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgacc 8587204  T
Q  480 aaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    ||| | ||||||||||||||||||| ||| |||| |||||    
T  8587203 aaactttctcttataaataggaccggagggagtactattt 8587164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 513
Target Start/End: Complemental strand, 6552785 - 6552655
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  6552785 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 6552686  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  6552685 atttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 515
Target Start/End: Original strand, 7805698 - 7805831
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| ||||| |||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  7805698 atactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7805797  T
Q  482 aatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||| ||||||||||||||||||| ||| ||||||    
T  7805798 aatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 12763653 - 12763785
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  12763653 atactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 12763752  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||| ||||| ||| |||||    
T  12763753 aatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 32211362 - 32211494
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  | ||||||||||| |    
T  32211362 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 32211461  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| ||| |||||    
T  32211462 aatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 43199485 - 43199353
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  43199485 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 43199389  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||  ||||||||||||||||||| ||| |||||    
T  43199388 caaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 39571202 - 39571333
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||| | |    
T  39571202 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatcta 39571301  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  39571302 aatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 44498186 - 44498317
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||| ||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  44498186 atactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 44498285  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  44498286 aatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 7785909 - 7785775
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  7785909 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 7785813  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    | |||  ||||||||||||||||||| ||| |||||||    
T  7785812 ccaaaattctcttataaataggaccggagggagtatta 7785775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 469 - 519
Target Start/End: Original strand, 27422276 - 27422326
Alignment:
Q  469 ttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  27422276 ttttgttgacccaaatttctcttataaataggaccgaagggagtattattt 27422326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 31654613 - 31654743
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgacc 479  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| |||||||||||||||||||||    
T  31654613 tactccctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgacc 31654709  T
Q  480 aaaatgtctcttataaataggaccgaaggaagta 513  Q
     |||  ||| ||||||||||||||| ||||||||    
T  31654710 caaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 7012247 - 7012303
Alignment:
Q  459 atacatcaacttttgttga-ccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  7012247 atacatcaacttttgttgatccaaaat-tctcttataaataggaccggaggaagtatt 7012303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 504
Target Start/End: Complemental strand, 12343194 - 12343149
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  12343194 atacatcaacttttgttgaccaaaaattctcttataaataggaccg 12343149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 516
Target Start/End: Original strand, 33289261 - 33289394
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  |||| |||||| | ||    
T  33289261 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaa 33289360  T
Q  483 atgtctcttataaataggaccgaaggaagtatta 516  Q
    || ||||||||||||||||||| ||| |||||||    
T  33289361 atttctcttataaataggaccggaggtagtatta 33289394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 54743 - 54611
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  54743 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 54647  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    | |||  ||||||||||||||||||| ||| |||||    
T  54646 ccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 2890293 - 2890161
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  2890293 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 2890197  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    | |||  ||||||||||||||||||| ||| |||||    
T  2890196 ccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 513
Target Start/End: Original strand, 12343150 - 12343270
Alignment:
Q  393 ggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctctta 492  Q
    |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |||| |||||||    
T  12343150 ggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 12343249  T
Q  493 taaataggaccgaaggaagta 513  Q
    |||||||||||| ||| ||||    
T  12343250 taaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 25600999 - 25601131
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  | ||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  25600999 atactccctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 25601098  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| |||||||||||||||| || ||| |||||    
T  25601099 aatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 515
Target Start/End: Complemental strand, 39571257 - 39571201
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||    
T  39571257 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 39571201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 6552731 - 6552785
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  6552731 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 7805830 - 7805696
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||| ||||    
T  7805830 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgctgac 7805734  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    | |||  ||||||||||||||||||| ||| |||||||    
T  7805733 ccaaaattctcttataaataggaccggagggagtatta 7805696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 504
Target Start/End: Complemental strand, 28463666 - 28463620
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    |||||||||||||||||||||| || | |||||||||||||||||||    
T  28463666 aatacatcaacttttgttgacccaactttctcttataaataggaccg 28463620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 513
Target Start/End: Complemental strand, 31654743 - 31654613
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    |||| |||| |||| ||||||||| | |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  31654743 tacttcctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31654644  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  31654643 atttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 33289315 - 33289261
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  33289315 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 517
Target Start/End: Complemental strand, 44498241 - 44498183
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattat 517  Q
    |||||||||||||| |||||| |||  ||||||||||||||||||| ||| ||||||||    
T  44498241 atacatcaacttttattgacccaaaattctcttataaataggaccggagggagtattat 44498183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 515
Target Start/End: Original strand, 4245656 - 4245713
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||||| ||| ||||||    
T  4245656 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4245713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 515
Target Start/End: Complemental strand, 12763785 - 12763652
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  12763785 atactacctccggtcttatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 12763689  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    | |||  | ||||||||||||||||| ||| ||||||    
T  12763688 ccaaaattatcttataaataggaccggagggagtatt 12763652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 515
Target Start/End: Complemental strand, 32211495 - 32211361
Alignment:
Q  381 catactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    |||||| |||| |||| ||||||||||| | ||||||||||||||||    |||||| || |||  ||||||  | ||| ||||||||| ||||||||||    
T  32211495 catactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggact--gaatttttaactagatacatcaatttttgttgac 32211398  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    | |||  ||||||||||||||||||| ||| ||||||    
T  32211397 ccaaaattctcttataaataggaccggagggagtatt 32211361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 24692054 - 24692110
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||||| || | | |||||||||||||| |||||| ||||||    
T  24692054 atacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatt 24692110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 513
Target Start/End: Original strand, 15888427 - 15888482
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||||| ||| ||||    
T  15888427 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 501
Target Start/End: Complemental strand, 17007026 - 17006923
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    ||||||||||| | ||||  ||||| ||||  |||||||||||| ||| ||||  | ||  || |||||||||||||||||| || | ||||||||||||    
T  17007026 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaat 17006927  T
Q  498 agga 501  Q
    ||||    
T  17006926 agga 17006923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 501
Target Start/End: Original strand, 17570221 - 17570324
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    ||||||||||| | ||||  ||||| ||||  |||||||||||| ||| ||||  | ||  || |||||||||||||||||| || | ||||||||||||    
T  17570221 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaat 17570320  T
Q  498 agga 501  Q
    ||||    
T  17570321 agga 17570324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 514
Target Start/End: Complemental strand, 25601054 - 25600999
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||| |||||||||||||| |||  ||||||||||||||||||| ||| |||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 3304332 - 3304278
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  | ||||||||||||||||| ||| ||||    
T  3304332 atacatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 504
Target Start/End: Complemental strand, 15688084 - 15688039
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    ||||||||||||||||||||| || | ||||||||||| |||||||    
T  15688084 atacatcaacttttgttgacccaactttctcttataaacaggaccg 15688039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 504
Target Start/End: Original strand, 33057670 - 33057715
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    ||||||||| |||||||||||||| | ||||||||||||| |||||    
T  33057670 atacatcaatttttgttgaccaaactttctcttataaataagaccg 33057715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 3236479 - 3236447
Alignment:
Q  383 tactccctctggtcatatttataagaaatattt 415  Q
    ||||||||| |||||||||||||||||||||||    
T  3236479 tactccctccggtcatatttataagaaatattt 3236447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 459 - 499
Target Start/End: Complemental strand, 15888406 - 15888366
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaatag 499  Q
    ||||||||||||||||||||| |||  ||||||||||||||    
T  15888406 atacatcaacttttgttgacccaaaattctcttataaatag 15888366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 459 - 515
Target Start/End: Complemental strand, 32114529 - 32114473
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||| ||||||||||| |||  | ||||||||||||||||| ||| ||||||    
T  32114529 atacatcaatttttgttgacccaaaattttcttataaataggaccggagggagtatt 32114473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 499
Target Start/End: Original strand, 40355249 - 40355281
Alignment:
Q  467 acttttgttgaccaaaatgtctcttataaatag 499  Q
    |||||||||||||||||| ||||||||||||||    
T  40355249 acttttgttgaccaaaatatctcttataaatag 40355281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 498
Target Start/End: Complemental strand, 53275410 - 53275310
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | ||||||||||||   |||||||||| ||||||||||| |||| ||| ||||||||    
T  53275410 tatttataagaaatattaaggtcaacaaaatatgatgtatctaattaagaatttggattaaatacatcaatttttgttgacccaaatatcttttataaat 53275311  T
Q  498 a 498  Q
    |    
T  53275310 a 53275310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 383 - 514
Target Start/End: Complemental strand, 34988205 - 34988074
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||||||||||  |||||||| |  ||||||||||   ||| ||  ||||||  ||| ||||||||||||||||| ||    
T  34988205 tactccctccggtcctatttataagaaatatttgagtcaacaatagttgatgtatctagttaaaaaagtggaccagatagatcaacttttgttgacccaa 34988106  T
Q  483 atgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||| ||||||||||||||||| |||||    
T  34988105 atgtctctaataaataggaccgaagggagtat 34988074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 383 - 516
Target Start/End: Original strand, 21295326 - 21295459
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  |||||||||| | ||| ||||  | || |||||||  ||||||||||||| ||    
T  21295326 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaa 21295425  T
Q  483 atgtctcttataaataggaccgaaggaagtatta 516  Q
    || ||||||||||||||||||| ||| |||||||    
T  21295426 atttctcttataaataggaccggaggtagtatta 21295459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 46208161 - 46208029
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  |||||||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  46208161 atactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 46208062  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| ||| |||||    
T  46208061 aatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 520
Target Start/End: Original strand, 8817385 - 8817523
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||||| || |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  8817385 atactccttccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 8817484  T
Q  482 aatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||| ||||||||||||||||||||||| |||||| ||||    
T  8817485 aatttctcttataaataggaccgaaggtagtattttttt 8817523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 519
Target Start/End: Complemental strand, 4238725 - 4238588
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||| |||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  4238725 atactacctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 4238626  T
Q  482 aatgtctcttataaataggaccgaaggaagtattattt 519  Q
    ||| ||||||||||||||||||| ||| ||||||||||    
T  4238625 aatttctcttataaataggaccggaggtagtattattt 4238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 383 - 516
Target Start/End: Original strand, 34080030 - 34080163
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  34080030 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaa 34080129  T
Q  483 atgtctcttataaataggaccgaaggaagtatta 516  Q
    || ||||||||||||||||||| ||| |||||||    
T  34080130 atttctcttataaataggaccggaggtagtatta 34080163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 383 - 520
Target Start/End: Complemental strand, 38964522 - 38964385
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||| | ||    
T  38964522 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 38964423  T
Q  483 atgtctcttataaataggaccgaaggaagtattatttt 520  Q
    || ||||||||||||||||||| ||| |||||||||||    
T  38964422 atttctcttataaataggaccggaggtagtattatttt 38964385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 515
Target Start/End: Complemental strand, 9213646 - 9213514
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    |||||||||  ||| ||||||| ||| | ||||||||||||||||  |||||||| ||  ||  || || | ||  |||||||||||||||||||| |||    
T  9213646 tactccctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaa 9213547  T
Q  483 atgtctcttataaataggaccgaaggaagtatt 515  Q
    |||||| ||||||||||||||| ||| ||||||    
T  9213546 atgtcttttataaataggaccggagggagtatt 9213514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 49823380 - 49823512
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  49823380 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 49823479  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| ||| |||||    
T  49823480 aatttctcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 10298110 - 10297979
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  10298110 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 10298011  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  10298010 aatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 383 - 514
Target Start/End: Original strand, 19557052 - 19557183
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  19557052 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 19557151  T
Q  483 atgtctcttataaataggaccgaaggaagtat 514  Q
    || ||||||||||||||||||| ||| |||||    
T  19557152 atttctcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 382 - 517
Target Start/End: Complemental strand, 22722062 - 22721927
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||||| || |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  22722062 atactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 22721963  T
Q  482 aatgtctcttataaataggaccgaaggaagtattat 517  Q
    ||| ||||||||||||||||||| ||| ||||||||    
T  22721962 aatttctcttataaataggaccggaggtagtattat 22721927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 515
Target Start/End: Original strand, 9111497 - 9111626
Alignment:
Q  386 tccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatg 485  Q
    |||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  |  | |||||||  ||||||||||||| ||||     
T  9111497 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatt 9111596  T
Q  486 tctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||||||| ||||||    
T  9111597 tctcttataaataggaccgaaggtagtatt 9111626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 516
Target Start/End: Original strand, 42170346 - 42170479
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    |||||| ||||||| ||||||||||| |  ||| |||||||||||  |||||||||||  ||| ||||    || |||||||  ||||||||||||| ||    
T  42170346 tactccatctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaa 42170445  T
Q  483 atgtctcttataaataggaccgaaggaagtatta 516  Q
    || ||||||||||||| ||||| ||| |||||||    
T  42170446 atttctcttataaataagaccggaggtagtatta 42170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 383 - 519
Target Start/End: Original strand, 2787832 - 2787968
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| ||||| |||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  2787832 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2787931  T
Q  483 atgtctcttataaataggaccgaaggaagtattattt 519  Q
    || ||||||||||||||||||| ||  ||||||||||    
T  2787932 atttctcttataaataggaccggagatagtattattt 2787968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 4238593 - 4238725
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  4238593 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 4238689  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||  ||||||||||||||||||| ||| |||||    
T  4238690 caaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 17653712 - 17653844
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgacc 479  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| |||||||||||||||||||||    
T  17653712 tactccctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgacc 17653808  T
Q  480 aaaatgtctcttataaataggaccgaaggaagtatt 515  Q
     |||  ||||||||||||||||||| ||| ||||||    
T  17653809 caaaattctcttataaataggaccggaggtagtatt 17653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 521
Target Start/End: Complemental strand, 8437556 - 8437417
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  |||  ||||||||||  ||||||||||   ||| ||||  | || |||||||  |||||| |||||| |    
T  8437556 atactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgaccta 8437457  T
Q  482 aatgtctcttataaataggaccgaaggaagtattattttg 521  Q
    ||| ||||||||||||||||||| ||| ||||||| ||||    
T  8437456 aatttctcttataaataggaccggaggtagtattaatttg 8437417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 17653843 - 17653712
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||| |||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  17653843 atactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 17653744  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  17653743 aatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 37509052 - 37508921
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||| |||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  37509052 atactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 37508953  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  37508952 aatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 514
Target Start/End: Original strand, 37508921 - 37509052
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgacc 479  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| |||||||||||||||||||||    
T  37508921 tactccctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgacc 37509017  T
Q  480 aaaatgtctcttataaataggaccgaaggaagtat 514  Q
     |||  ||||||||||||||||||| ||| |||||    
T  37509018 caaaattctcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 51406804 - 51406673
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  51406804 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 51406705  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||| ||||| ||| ||||    
T  51406704 aatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 396 - 498
Target Start/End: Complemental strand, 25394454 - 25394352
Alignment:
Q  396 catatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataa 495  Q
    |||||||||||| |||||||| || ||  ||||||||| ||||||  |||||||||| ||| ||||||| || ||||||||| | |||| ||||||| ||    
T  25394454 catatttataagcaatatttaagttaaggaaatgtgatttatctggttaagaatttgaaccaaatacattaatttttgttgatccaaatatctcttaaaa 25394355  T
Q  496 ata 498  Q
    |||    
T  25394354 ata 25394352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 38964468 - 38964522
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  38964468 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 504
Target Start/End: Original strand, 40690995 - 40691117
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||| ||| |    
T  40690995 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaaccta 40691094  T
Q  482 aatgtctcttataaataggaccg 504  Q
    ||| |||||||||||||||||||    
T  40691095 aatttctcttataaataggaccg 40691117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 383 - 513
Target Start/End: Complemental strand, 48340527 - 48340397
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  48340527 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 48340428  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || |||||| |||||||||||| ||| ||||    
T  48340427 atttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 515
Target Start/End: Original strand, 44785411 - 44785528
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |||| ||||||||||||    
T  44785411 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 44785510  T
Q  498 aggaccgaaggaagtatt 515  Q
    ||||||| ||| ||||||    
T  44785511 aggaccggaggtagtatt 44785528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 10298055 - 10298111
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||    
T  10298055 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 10298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 515
Target Start/End: Complemental strand, 40691050 - 40690994
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||    
T  40691050 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 40690994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 46208029 - 46208161
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    |||||||||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  |  || ||||||||||||||||||||    
T  46208029 atactccctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaaatagatacatcaacttttgttgac 46208125  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    | |||  ||||||||||||||||||| ||| |||||    
T  46208126 ctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 49823512 - 49823380
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  49823512 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 49823416  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    | |||  ||||||||||||||||||| ||| |||||    
T  49823415 ccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 518
Target Start/End: Complemental strand, 8817440 - 8817381
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattatt 518  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| | | |||||||||    
T  8817440 atacatcaacttttgttgacccaaaattctcttataaataggaccggaaggagtattatt 8817381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 19557183 - 19557052
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  19557183 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 19557087  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||||||||||||||||||| ||| ||||    
T  19557086 ccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 513
Target Start/End: Complemental strand, 35513528 - 35513473
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  35513528 aatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 44785527 - 44785396
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  44785527 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 44785431  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  |||||||||||||| |||| ||||||||    
T  44785430 ccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 2131748 - 2131802
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||| ||| ||||    
T  2131748 atacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 21295380 - 21295326
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  21295380 atacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 504
Target Start/End: Original strand, 22721930 - 22722052
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  22721930 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 22722026  T
Q  479 caaaatgtctcttataaataggaccg 504  Q
    | |||  |||||||||||||||||||    
T  22722027 ccaaaattctcttataaataggaccg 22722052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 34080084 - 34080030
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  34080084 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 516
Target Start/End: Original strand, 42507358 - 42507488
Alignment:
Q  386 tccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatg 485  Q
    |||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   | | ||||  | || |||||||  ||||||||||||| ||||     
T  42507358 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatt 42507457  T
Q  486 tctcttataaataggaccgaaggaagtatta 516  Q
    ||| ||||||||||||||| ||| |||||||    
T  42507458 tctattataaataggaccggaggtagtatta 42507488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 504
Target Start/End: Complemental strand, 42507486 - 42507364
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||| | | |||||||||||||||| |||| ||||| || |||  |||||| || ||| ||||||||||||||||||||    
T  42507486 atactacctccggtcctatttataatagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaattttgaactagatacatcaacttttgttgac 42507390  T
Q  479 caaaatgtctcttataaataggaccg 504  Q
    | |||  |||||||||||||||||||    
T  42507389 ccaaaattctcttataaataggaccg 42507364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 48340473 - 48340527
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  48340473 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 454 - 515
Target Start/End: Complemental strand, 9027201 - 9027140
Alignment:
Q  454 acctaatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    |||| ||||||||||||||||||||| || | | ||||||||||||||||| ||| ||||||    
T  9027201 acctgatacatcaacttttgttgacccaactttatcttataaataggaccggagggagtatt 9027140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 504
Target Start/End: Complemental strand, 9111548 - 9111503
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||    
T  9111548 atacatcaacttttgttgacccaaaattctcttataaataggaccg 9111503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 8437501 - 8437556
Alignment:
Q  459 atacatcaacttttgttgac-caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||| |||||    
T  8437501 atacatcaacttttgttgactcaaaat-tctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 503
Target Start/End: Complemental strand, 42170400 - 42170356
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggacc 503  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||    
T  42170400 atacatcaacttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 51406749 - 51406804
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||| ||| |||||    
T  51406749 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 2787886 - 2787832
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||| ||||| |||  ||||||||||||||||||| ||| ||||    
T  2787886 atacatcaacttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 521
Target Start/End: Complemental strand, 6013382 - 6013328
Alignment:
Q  467 acttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattattttg 521  Q
    ||||||||||||| |||  ||||||||||||||||||| ||| |||| |||||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagtaatattttg 6013328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 33942986 - 33942944
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaatagga 501  Q
    ||||||||||||||||||||| || | ||||||||||||||||    
T  33942986 atacatcaacttttgttgacccaagtttctcttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 502
Target Start/End: Original strand, 9213515 - 9213635
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctg-actaagaatttggacctaatacatcaacttttgttgacca 480  Q
    |||||||||| |||| ||||||||| | | ||||  ||||||||||  ||||||||||| |||||   | |  ||| |||||||||| |||||||||||     
T  9213515 atactccctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttata-accaaatacatcaatttttgttgacct 9213613  T
Q  481 aaatgtctcttataaataggac 502  Q
    |||| ||||| |||||||||||    
T  9213614 aaatttctctaataaataggac 9213635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 36095811 - 36095766
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaa 427  Q
    |||||||||| |||| ||||||||||| | ||||||||||||||||    
T  36095811 atactccctccggtcctatttataagataaatttaggtcaacaaaa 36095766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 516
Target Start/End: Complemental strand, 45652123 - 45652066
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||||||| | ||||||||||  |||||||||||||||||||||| | ||| |||||||    
T  45652123 atacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatta 45652066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 517
Target Start/End: Complemental strand, 55249986 - 55249926
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctct--tataaataggaccgaaggaagtattat 517  Q
    ||||||||||||||||||| | ||||||||||  || ||||||||||| ||| ||||||||    
T  55249986 atacatcaacttttgttgatctaaatgtctctcataaaaataggaccggagggagtattat 55249926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 31757435 - 31757479
Alignment:
Q  395 tcatatttataagaaatatttaggtcaacaaaatgtgatgtatct 439  Q
    ||||||||||||||| |||||||||||| ||||  ||||||||||    
T  31757435 tcatatttataagaagtatttaggtcaataaaagttgatgtatct 31757479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 458 - 502
Target Start/End: Complemental strand, 33128261 - 33128217
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggac 502  Q
    ||||||| |||||||||||||| |||| |||||||||| ||||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggac 33128217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 458 - 514
Target Start/End: Original strand, 36095755 - 36095811
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||  ||||||||||||| |||| | ||||||||||||||||| ||| |||||    
T  36095755 aatacattcacttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 382 - 517
Target Start/End: Complemental strand, 23916 - 23781
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| |||||||||||||  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  23916 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 23817  T
Q  482 aatgtctcttataaataggaccgaaggaagtattat 517  Q
    ||| ||||||||||||||||||| ||| ||||||||    
T  23816 aatttctcttataaataggaccggaggtagtattat 23781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 519
Target Start/End: Original strand, 23784 - 23921
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  23784 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 23880  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    | |||  | ||||||||||||||||| ||| ||||||||||    
T  23881 ccaaaattttcttataaataggaccggagggagtattattt 23921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 2e-20; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 382 - 517
Target Start/End: Complemental strand, 48336394 - 48336259
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| |||||||||||||  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  48336394 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 48336295  T
Q  482 aatgtctcttataaataggaccgaaggaagtattat 517  Q
    ||| ||||||||||||||||||| ||| ||||||||    
T  48336294 aatttctcttataaataggaccggaggtagtattat 48336259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 515
Target Start/End: Original strand, 41469765 - 41469898
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  41469765 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 41469864  T
Q  482 aatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||| ||| ||||||||||||||||||||||||||    
T  41469865 aatttcttttataaataggaccgaaggaagtatt 41469898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 520
Target Start/End: Complemental strand, 47833741 - 47833604
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  47833741 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 47833642  T
Q  483 atgtctcttataaataggaccgaaggaagtattatttt 520  Q
    || ||||||||||||||||||| ||| |||||||||||    
T  47833641 atttctcttataaataggaccggaggtagtattatttt 47833604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 3993107 - 3992973
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  3993107 atactccctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccga 3993008  T
Q  482 aatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||| ||||||||||||||||||| ||| |||||||    
T  3993007 aatttctcttataaataggaccggaggtagtatta 3992973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 20538686 - 20538816
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||| ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  20538686 tactccctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 20538785  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  20538786 atttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 383 - 516
Target Start/End: Complemental strand, 3372251 - 3372118
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  3372251 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3372152  T
Q  483 atgtctcttataaataggaccgaaggaagtatta 516  Q
    || ||||||||||||||||||| ||| |||||||    
T  3372151 atttctcttataaataggaccggaggtagtatta 3372118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 383 - 516
Target Start/End: Complemental strand, 42797862 - 42797729
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  |||||||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  42797862 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 42797763  T
Q  483 atgtctcttataaataggaccgaaggaagtatta 516  Q
    || ||||||||| ||||||||| ||| |||||||    
T  42797762 atttctcttatatataggaccggaggtagtatta 42797729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 47838671 - 47838610
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||    
T  47838671 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtattatttt 47838610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 517
Target Start/End: Original strand, 51894582 - 51894716
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  |||||||||||  ||| ||||  | || || ||||  ||||||||||||| ||    
T  51894582 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaa 51894681  T
Q  483 atgtctcttataaataggaccgaaggaagtattat 517  Q
    || | ||||||||||||||||| ||| ||||||||    
T  51894682 atttttcttataaataggaccggaggtagtattat 51894716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 459 - 516
Target Start/End: Complemental strand, 41469820 - 41469763
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||    
T  41469820 atacatcaacttttgttgaccaaaaattctcttataaataggaccggagggagtatta 41469763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 506
Target Start/End: Complemental strand, 33621927 - 33621803
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  33621927 atactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 33621828  T
Q  482 aatgtctcttataaataggaccgaa 506  Q
    ||| |||||||||||||| ||||||    
T  33621827 aatttctcttataaatagaaccgaa 33621803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 47838616 - 47838748
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  47838616 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccga 47838715  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| |||||||||||||||| || ||| |||||    
T  47838716 aatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 518
Target Start/End: Original strand, 3422136 - 3422195
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattatt 518  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||||||    
T  3422136 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattatt 3422195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 514
Target Start/End: Original strand, 24393837 - 24393951
Alignment:
Q  400 tttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaa-cttttgttgaccaaaatgtctcttataaata 498  Q
    |||||||||||||||||||| ||||||| |||| ||||||   |||| ||||| ||| ||||||||||  ||||||||||| |||||| |||||| ||||    
T  24393837 tttataagaaatatttaggtaaacaaaaagtgacgtatctcgttaag-atttgaaccaaatacatcaattttttgttgacccaaatgtttcttatgaata 24393935  T
Q  499 ggaccgaaggaagtat 514  Q
     ||||| ||| |||||    
T  24393936 tgaccggagggagtat 24393951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 31013138 - 31013036
Alignment:
Q  395 tcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttata 494  Q
    ||||||||||| |||  ||||||||||||||||  ||||||||||   |||||||||  ||| |||||||| ||||||||||| | |||||||| |||||    
T  31013138 tcatatttatatgaac-atttaggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttata 31013040  T
Q  495 aata 498  Q
    ||||    
T  31013039 aata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 340
Target Start/End: Original strand, 46089803 - 46089918
Alignment:
Q  225 atgtatatgagagctaagtatgagagggttattgggtctaaagattctgaagctttctacatgatgaaccctgttggtagtggtggtcctgaactcagcc 324  Q
    |||||||||||||||| || ||||||  || |||| |||| |||||||||||||||||| |||||||| |||| | | | ||||| |||||| || ||      
T  46089803 atgtatatgagagctaggtttgagagaattgttggctctagagattctgaagctttctatatgatgaatcctgatagcaatggtgctcctgagcttagtg 46089902  T
Q  325 tttacttgcttagagt 340  Q
    |||| |||||||||||    
T  46089903 tttatttgcttagagt 46089918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 53337501 - 53337370
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||| ||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  53337501 atactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 53337402  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  53337401 aatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 6121893 - 6122023
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||| | ||    
T  6121893 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 6121992  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  6121993 atttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 43900548 - 43900679
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctg-actaagaatttggaccta-atacatcaacttttgttgacc 479  Q
    |||||||||| |||| ||||||||||| | ||||||||||||||||    |||||| || |||  ||||||  | ||| ||||||||||||||||| |||    
T  43900548 atactccctccggtcctatttataagagaaatttaggtcaacaaaagtaaatgtatttggact--gaatttttaactagatacatcaacttttgttaacc 43900645  T
Q  480 aaaatgtctcttataaataggaccgaaggaagta 513  Q
     |||  ||||||||||||||||||| ||||||||    
T  43900646 caaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 519
Target Start/End: Original strand, 48336262 - 48336399
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  48336262 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 48336358  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    | |||  | ||||||||||||||||| ||| ||||||||||    
T  48336359 ccaaaattttcttataaataggaccggagggagtattattt 48336399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 3904682 - 3904814
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  |||||||| |   ||| ||||  | || |||||||  ||||||||||||| |    
T  3904682 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgaccta 3904781  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||| ||||||||||||||| ||| |||||    
T  3904782 aatttcttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 515
Target Start/End: Complemental strand, 43900679 - 43900547
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    |||| |||| |||| ||||||||||| |  ||| ||| |||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  43900679 tacttcctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaa 43900580  T
Q  483 atgtctcttataaataggaccgaaggaagtatt 515  Q
    || ||||||||||||||||||| ||| ||||||    
T  43900579 atttctcttataaataggaccggagggagtatt 43900547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 513
Target Start/End: Complemental strand, 44900176 - 44900080
Alignment:
Q  417 ggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    |||||||||||  ||| |||||||  |||  | |||||||  ||| |||||||||||||||||| ||| ||||||||||||||||||| ||| ||||    
T  44900176 ggtcaacaaaagttgacgtatctggttaaacaattggaccagatatatcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 498
Target Start/End: Original strand, 50430433 - 50430533
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    ||||||||||| |||||| |||||||||||  |||||||||||  ||| ||||    || |||||||||||||||||||||| || |  |||||||||||    
T  50430433 tatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaat 50430532  T
Q  498 a 498  Q
    |    
T  50430533 a 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 519
Target Start/End: Complemental strand, 51894636 - 51894576
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||| |||||    
T  51894636 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaatattt 51894576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 24704501 - 24704370
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| | || ||||||||||| |  ||| |||||||||||  | ||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  24704501 atactccctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 24704402  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  24704401 aatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 47833610 - 47833741
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  47833610 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 47833706  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||||||||||||||||||| ||| ||||    
T  47833707 ccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 52756751 - 52756806
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| |||  ||| ||||||||||||||||||| |||||    
T  52756751 atacatcaacttttgttgacccaaaattcttttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 1716355 - 1716301
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||| ||| ||||    
T  1716355 atacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 504
Target Start/End: Original strand, 5986951 - 5986997
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||    
T  5986951 aatacatcaacttttgttgacccaaaattctcttataaataggaccg 5986997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 6121947 - 6121893
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  6121947 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 7579386 - 7579440
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  |||||||||||||| |||| ||||||||    
T  7579386 atacatcaacttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 504
Target Start/End: Original strand, 17236863 - 17236909
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||    
T  17236863 aatacatcaacttttgttgacccaaatttttcttataaataggaccg 17236909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 42797808 - 42797862
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  42797808 atacatcaacttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 513
Target Start/End: Complemental strand, 46797855 - 46797725
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  |||| |||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  46797855 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46797756  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || |||||||||||||| |||| ||| ||||    
T  46797755 atttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 504
Target Start/End: Complemental strand, 4780425 - 4780305
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| | |||| |||||||||||  | |||||||||| ||| || ||||| |  ||||||| ||||||  |||   ||    
T  4780425 tactccctccggtcctatttataagagaaattttggtcaacaaaagttaatgtatctgattaa-aaattggatcggatacatccacttttactgatgtaa 4780327  T
Q  483 atgtctcttataaataggaccg 504  Q
    |||||||||||||||| |||||    
T  4780326 atgtctcttataaataagaccg 4780305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 516
Target Start/End: Original strand, 33621872 - 33621929
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||||||||||||||||||||| |||  | ||||||||||||||||| ||| |||||||    
T  33621872 atacatcaacttttgttgacccaaaattatcttataaataggaccggagggagtatta 33621929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 38160383 - 38160444
Alignment:
Q  394 gtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggac 455  Q
    ||||||||||||||| | ||||||||||||||||  |||||||||||| ||| || ||||||    
T  38160383 gtcatatttataagagagatttaggtcaacaaaaattgatgtatctgattaaaaaattggac 38160444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 46089720 - 46089769
Alignment:
Q  133 agatattgaaagctgtcgaacctatttcaatgggtgctggtgtgttgcca 182  Q
    |||| ||||||||||| || ||||||||||||||||||||||| ||||||    
T  46089720 agattttgaaagctgttgagcctatttcaatgggtgctggtgttttgcca 46089769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 3904738 - 3904682
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||||| ||||||||||| |||  ||||||||||||||||||| ||| |||||    
T  3904738 aatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 33551256 - 33551200
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||||| ||| |||||    
T  33551256 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 38671475 - 38671555
Alignment:
Q  395 tcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgtt 475  Q
    |||||||||||| ||||||||| |||||||||| ||||| ||  |   |||||||||||||| ||||||| ||| ||||||    
T  38671475 tcatatttataaaaaatatttaagtcaacaaaaggtgatatacttagttaagaatttggaccaaatacattaacgtttgtt 38671555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 42286422 - 42286482
Alignment:
Q  453 gacctaatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    |||| ||||||||||||||||||||||||  ||| ||||||||| ||||||| ||| ||||    
T  42286422 gaccaaatacatcaacttttgttgaccaatttgtttcttataaaaaggaccggaggcagta 42286482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 501
Target Start/End: Original strand, 1716301 - 1716417
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| ||| || |||||||||||  ||||||||||||     |||||  |||  || |||||||||| ||||||| ||    
T  1716301 tactccctccggtcttatttataagagataatttggtcaacaaaagttgatgtatctga--tccaattttaaccagatgcatcaactttggttgacctaa 1716398  T
Q  483 atgtctcttataaatagga 501  Q
    |  ||||||||||||||||    
T  1716399 acttctcttataaatagga 1716417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 3372120 - 3372251
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  3372120 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 3372216  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  | ||||||||||||||||| ||| ||||    
T  3372217 ccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 3993052 - 3993107
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| |||  ||||||||||||| ||||| ||| |||||    
T  3993052 atacatcaacttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 53337446 - 53337501
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||||||||| |||||| |||  ||||||||||||||||||| ||| |||||    
T  53337446 atacatcaacttttattgacccaaaattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 20538740 - 20538686
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  20538740 atacatcaaattttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 514
Target Start/End: Complemental strand, 26231622 - 26231576
Alignment:
Q  468 cttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||||||| |||| ||||||||||||||||||| ||| |||||    
T  26231622 cttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 514
Target Start/End: Original strand, 40913190 - 40913320
Alignment:
Q  384 actccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaa 483  Q
    |||||||| |||| ||||||||||| | |||| | |||||||||  |||| ||||    ||| ||||  | || |||||||  ||||||||||| | |||    
T  40913190 actccctccggtcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaa 40913289  T
Q  484 tgtctcttataaataggaccgaaggaagtat 514  Q
    | ||||||||||||||||||| ||| |||||    
T  40913290 tttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 504
Target Start/End: Complemental strand, 41615731 - 41615685
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    |||||||||||||||||||| | || | |||||||||||||||||||    
T  41615731 aatacatcaacttttgttgatccaattttctcttataaataggaccg 41615685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 513
Target Start/End: Original strand, 46797805 - 46797855
Alignment:
Q  463 atcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  46797805 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 504
Target Start/End: Complemental strand, 52756806 - 52756684
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||  |||| ||||||||| | |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  |||| |||||||| |    
T  52756806 atactcccttcggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgaccta 52756707  T
Q  482 aatgtctcttataaataggaccg 504  Q
    ||| |||||||||||||||||||    
T  52756706 aatttctcttataaataggaccg 52756684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 24393951 - 24393906
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaa 427  Q
    |||||||||| ||||||||| |||||||| |||| |||||||||||    
T  24393951 atactccctccggtcatattcataagaaacatttgggtcaacaaaa 24393906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 504
Target Start/End: Complemental strand, 40913239 - 40913198
Alignment:
Q  463 atcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    ||||||||||||||| | |||| |||||||||||||||||||    
T  40913239 atcaacttttgttgatccaaatttctcttataaataggaccg 40913198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 51894713 - 51894668
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaa 427  Q
    ||||| |||| |||| ||||||||||||| ||||||||||||||||    
T  51894713 atactacctccggtcctatttataagaaaaatttaggtcaacaaaa 51894668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 7579365 - 7579309
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    |||||||  ||||||||| ||| |||| ||||||||||||||||||| ||| |||||    
T  7579365 aatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 437
Target Start/End: Complemental strand, 17236920 - 17236864
Alignment:
Q  381 catactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtat 437  Q
    ||||||| ||| |||| ||||||||||||| |||| |||||||||||  ||||||||    
T  17236920 catactctctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtat 17236864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 494
Target Start/End: Complemental strand, 41594737 - 41594673
Alignment:
Q  430 tgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttata 494  Q
    |||||||||||  | | ||||||||||  ||||||||||||||||||||| || | |||||||||    
T  41594737 tgatgtatctggttcaaaatttggaccatatacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 45725939 - 45725979
Alignment:
Q  466 aacttttgttgaccaaaatgtctcttataaataggaccgaa 506  Q
    ||||||||||||| ||| | |||||||||||||||||||||    
T  45725939 aacttttgttgacgaaactttctcttataaataggaccgaa 45725979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 517
Target Start/End: Original strand, 48196007 - 48196043
Alignment:
Q  481 aaatgtctcttataaataggaccgaaggaagtattat 517  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  48196007 aaatgtttcttataaataggaccggaggaagtattat 48196043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 6e-20; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 382 - 515
Target Start/End: Original strand, 11897053 - 11897186
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctga-ctaagaatttggacctaatacatcaacttttgttgacca 480  Q
    |||||||||| |||| ||||||||||| | | ||||||||||||||  |||||||||||| || | | |||  |||  |||||||||||||||||||||     
T  11897053 atactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactga-atttttaaccggatacatcaacttttgttgaccc 11897151  T
Q  481 aaatgtctcttataaataggaccgaaggaagtatt 515  Q
    |||| ||||||||||||||||||| ||| ||||||    
T  11897152 aaatttctcttataaataggaccggagggagtatt 11897186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 517
Target Start/End: Original strand, 27159358 - 27159492
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  27159358 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 27159457  T
Q  483 atgtctcttataaataggaccgaaggaagtattat 517  Q
    || ||||||||||||||||||| ||| ||||||||    
T  27159458 atttctcttataaataggaccggaggtagtattat 27159492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 517
Target Start/End: Original strand, 44668093 - 44668227
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  44668093 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44668192  T
Q  483 atgtctcttataaataggaccgaaggaagtattat 517  Q
    || ||||||||||||||||||| ||| ||||||||    
T  44668193 atttctcttataaataggaccggaggtagtattat 44668227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 519
Target Start/End: Complemental strand, 11897185 - 11897048
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| | |||| |||||||||||  ||||||||| |  ||| ||||  |  |  ||||||||||||||||||||| |    
T  11897185 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgaccta 11897086  T
Q  482 aatgtctcttataaataggaccgaaggaagtattattt 519  Q
    | | ||||||||||||||||||| ||| ||||| ||||    
T  11897085 actttctcttataaataggaccggagggagtatcattt 11897048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 12483759 - 12483625
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatct-gactaagaatttggacctaa-tacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| | ||||  |||||| || |||| |||||||||||||||||||    
T  12483759 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttagact--gaattttgaactaaatacatcaacttttgttgac 12483663  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    | |||  ||||||||||||||||||| ||| |||||||    
T  12483662 ccaaaattctcttataaataggaccggagggagtatta 12483625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 504
Target Start/End: Complemental strand, 14984968 - 14984846
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  14984968 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 14984869  T
Q  482 aatgtctcttataaataggaccg 504  Q
    ||| |||||||||||||||||||    
T  14984868 aatttctcttataaataggaccg 14984846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 31842795 - 31842925
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  31842795 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31842894  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  31842895 atttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 39401966 - 39402096
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  39401966 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 39402065  T
Q  483 atgtctcttataaataggaccgaaggaagta 513  Q
    || ||||||||||||||||||| ||| ||||    
T  39402066 atttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 398 - 520
Target Start/End: Complemental strand, 40676904 - 40676782
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    ||||||||| ||| ||||  ||||||||||  | |||||| ||| ||| || ||||||  |||||||| | |||||||||||||||||| ||||||||||    
T  40676904 tatttataacaaaaatttcagtcaacaaaagttaatgtatatgattaacaaattggactaaatacatccatttttgttgaccaaaatgtttcttataaat 40676805  T
Q  498 aggaccgaaggaagtattatttt 520  Q
    | ||||| | ||| |||||||||    
T  40676804 aagaccggatgaactattatttt 40676782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 516
Target Start/End: Original strand, 26471065 - 26471198
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| | |||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  26471065 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 26471164  T
Q  483 atgtctcttataaataggaccgaaggaagtatta 516  Q
    || ||||||||||||||||||| ||| |||||||    
T  26471165 atttctcttataaataggaccggaggtagtatta 26471198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 514
Target Start/End: Complemental strand, 9981774 - 9981646
Alignment:
Q  386 tccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatg 485  Q
    |||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||||     
T  9981774 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 9981675  T
Q  486 tctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||| ||| |||||    
T  9981674 tctcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 383 - 515
Target Start/End: Complemental strand, 11796063 - 11795931
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || ||| |||  ||||||||||||| ||    
T  11796063 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaa 11795964  T
Q  483 atgtctcttataaataggaccgaaggaagtatt 515  Q
    || ||||||||||||||||||| ||| ||||||    
T  11795963 atttctcttataaataggaccggaggtagtatt 11795931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 47216698 - 47216829
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||  ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  47216698 atactccctccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 47216797  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  47216798 aatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 520
Target Start/End: Original strand, 9981646 - 9981784
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  9981646 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 9981742  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    | |||  ||||||||||||||||||| ||| | |||||||||    
T  9981743 ccaaaattctcttataaataggaccggagggaatattatttt 9981784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 390 - 504
Target Start/End: Complemental strand, 12062682 - 12062569
Alignment:
Q  390 tctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctc 489  Q
    ||||||| ||||||||||| | |||||  |||||||||  | |||||||||| ||| |||| | | |  ||||||||||||||||||| |||||| |||     
T  12062682 tctggtcctatttataagagaaatttaaatcaacaaaaattaatgtatctgattaaaaatt-gaatcagatacatcaacttttgttgatcaaaatatctt 12062584  T
Q  490 ttataaataggaccg 504  Q
    |||||||||||||||    
T  12062583 ttataaataggaccg 12062569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 378 - 503
Target Start/End: Complemental strand, 17556888 - 17556762
Alignment:
Q  378 caacatactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaataca-tcaacttttgttg 476  Q
    |||||||||||||| |||| ||||||||||| | | || |||||||||||  ||||||||||   ||| ||||  | || |||||| | |||||||||||    
T  17556888 caacatactccctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttg 17556789  T
Q  477 accaaaatgtctcttataaataggacc 503  Q
    ||| || | ||||||||||||||||||    
T  17556788 acctaactttctcttataaataggacc 17556762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 459 - 516
Target Start/End: Original strand, 14984913 - 14984970
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||||    
T  14984913 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatta 14984970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 504
Target Start/End: Complemental strand, 44955336 - 44955215
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgacc 479  Q
    |||| |||| |||| ||||||||||||| |||||||||||||||| |||| ||||| || |||  ||||||  | ||| |||||||||||||||||||||    
T  44955336 tactacctccggtcctatttataagaaaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgacc 44955240  T
Q  480 aaaatgtctcttataaataggaccg 504  Q
     |||  |||||||||||||||||||    
T  44955239 taaaattctcttataaataggaccg 44955215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 504
Target Start/End: Original strand, 47777481 - 47777602
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   | | ||||  | || |||||||  ||||||||||||| ||    
T  47777481 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaa 47777580  T
Q  483 atgtctcttataaataggaccg 504  Q
    || |||||||||||||||||||    
T  47777581 atttctcttataaataggaccg 47777602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 17556751 - 17556884
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||||||||||||| ||||||||||| | | ||||||||||||||  | | ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  17556751 atactccctctggtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 17556848  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    | || | ||||||||||||||||||| ||| |||||    
T  17556849 ccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 34042827 - 34042695
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||  ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  | ||||||||||| |    
T  34042827 atactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 34042728  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| ||| |||||    
T  34042727 aatttctcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 513
Target Start/End: Original strand, 44955216 - 44955336
Alignment:
Q  393 ggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctctta 492  Q
    |||| ||||||||||| |  |||||||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |||| | |||||    
T  44955216 ggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttctta 44955315  T
Q  493 taaataggaccgaaggaagta 513  Q
    |||||||||||| ||| ||||    
T  44955316 taaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 513
Target Start/End: Complemental strand, 47777601 - 47777481
Alignment:
Q  393 ggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgaccaaaatgtctc 489  Q
    |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  |||||| || ||| ||||||||||||||||||||| |||  ||||    
T  47777601 ggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaattttgaactagatacatcaacttttgttgacccaaaattctc 47777505  T
Q  490 ttataaataggaccgaaggaagta 513  Q
    ||||||||||||||| ||| ||||    
T  47777504 ttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 1051019 - 1050888
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| ||||||| |||  ||||||||||   ||| ||||  | || ||| |||  ||||||||||||| |    
T  1051019 atactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgaccta 1050920  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  1050919 aatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 16448184 - 16448239
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| || | ||||||||||||||||||| ||| |||||    
T  16448184 atacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 25694395 - 25694450
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||    
T  25694395 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 27159489 - 27159358
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  27159489 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 27159393  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||||||||||||||||||| ||| ||||    
T  27159392 ccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 44668224 - 44668093
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  44668224 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 44668128  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||||||||||||||||||| ||| ||||    
T  44668127 ccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 520
Target Start/End: Original strand, 5392221 - 5392283
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||||||||||||||| |||||| |||| ||||||||| || |||||||||  |||||||||||    
T  5392221 aatacatcaacttttattgacctaaatttctcttatatattggaccgaagagagtattatttt 5392283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 11796009 - 11796063
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  11796009 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 515
Target Start/End: Complemental strand, 12043723 - 12043602
Alignment:
Q  393 ggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctctta 492  Q
    |||| ||||||||||||| |||||  |||||||||  | ||||||||   ||| |||| | | | |||||||||||||||||||||  |||| ||| |||    
T  12043723 ggtcctatttataagaaaaatttaaatcaacaaaaattaatgtatcttgttaaaaatt-gaatcaaatacatcaacttttgttgacttaaatatctttta 12043625  T
Q  493 taaataggaccgaaggaagtatt 515  Q
    ||||||||| ||||||| |||||    
T  12043624 taaataggatcgaaggaggtatt 12043602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 516
Target Start/End: Original strand, 12483703 - 12483761
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||||| ||| |||||||    
T  12483703 aatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 12483761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 31842849 - 31842795
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  31842849 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Complemental strand, 39402020 - 39401966
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  39402020 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 47588468 - 47588334
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| ||||||||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  |  || ||||||||||||||||||||    
T  47588468 atactacctctggtcttatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaattagatacatcaacttttgttgac 47588372  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    | |||  |||||||||||||  |||||||| |||||||    
T  47588371 ccaaaattctcttataaataaaaccgaagggagtatta 47588334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 516
Target Start/End: Original strand, 47588352 - 47588470
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    ||||||||||| |  ||| |||||||||||  |||||||||| | ||| ||||  | || |||||||  ||||||||||||| |||| ||||||||||||    
T  47588352 tatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 47588451  T
Q  498 aggaccgaaggaagtatta 516  Q
    | ||||  ||| |||||||    
T  47588452 aagaccagaggtagtatta 47588470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 1050964 - 1051020
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||| ||||||| |||  ||||||||||||||||||| ||| ||||||    
T  1050964 atacatcaactttagttgacccaaaattctcttataaataggaccggagggagtatt 1051020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 26471196 - 26471065
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttga- 477  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| |||||||||||||||||||     
T  26471196 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgat 26471100  T
Q  478 ccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||| ||||||||||||||||||| ||| ||||    
T  26471099 ccaaaat-tctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 34042772 - 34042828
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||||| |||  |||||||||||||| |||| ||| ||||||    
T  34042772 atacatcaacttttgttgacccaaaattctcttataaatagaaccggagggagtatt 34042828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 514
Target Start/End: Complemental strand, 47216753 - 47216698
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| |||  |||||||||||||| |||| ||| |||||    
T  47216753 atacatcaacttttgttgacccaaaattctcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 47969771 - 47969832
Alignment:
Q  459 atacatcaacttttgttga-ccaaaatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||||||||||||||||||| ||||||| | | ||||||||||||||| ||| |||||||||||    
T  47969771 atacatcaacttttgttgatccaaaat-tattttataaataggaccggagggagtattatttt 47969832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 510
Target Start/End: Original strand, 38791193 - 38791289
Alignment:
Q  413 tttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaa 510  Q
    ||||| |||| |||| ||||| ||| | ||||||||||| |||  ||||||| || |||||||||| ||||  |||||||||||||||| || |||||    
T  38791193 tttagatcaataaaaagtgatatatttaactaagaatttagacaaaatacattaatttttgttgactaaaa-atctcttataaataggatcggaggaa 38791289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 503
Target Start/End: Original strand, 48050978 - 48051023
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggacc 503  Q
    |||||||||||||| |||||||||  ||||||||||||| ||||||    
T  48050978 aatacatcaactttagttgaccaatttgtctcttataaaaaggacc 48051023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 513
Target Start/End: Original strand, 23278087 - 23278131
Alignment:
Q  469 ttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||| |||| ||||||||||||||||||| ||| ||||    
T  23278087 ttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 499
Target Start/End: Complemental strand, 44953129 - 44953077
Alignment:
Q  447 aatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaatag 499  Q
    ||||||||||  |||||||||||||| |||||  |||||| ||||||||||||    
T  44953129 aatttggaccagatacatcaacttttattgactcaaatgtttcttataaatag 44953077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 9e-19; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 13103155 - 13103023
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  13103155 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 13103056  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| |||||||||    
T  13103055 aatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 520
Target Start/End: Complemental strand, 9395481 - 9395343
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  9395481 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 9395382  T
Q  482 aatgtctcttataaataggaccgaaggaagtattatttt 520  Q
    ||| ||||||||||||||||||| ||| |||| ||||||    
T  9395381 aatttctcttataaataggaccggaggtagtaatatttt 9395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 386 - 515
Target Start/End: Complemental strand, 4444087 - 4443958
Alignment:
Q  386 tccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatg 485  Q
    |||||| |||| ||||||||||| |  ||||| |||||||||  ||||||||||   ||| ||||  | |  |||||||  ||||||||||||| ||||     
T  4444087 tccctccggtcttatttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatt 4443988  T
Q  486 tctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||||||||||||||    
T  4443987 tctcttataaataggaccgaaggaagtatt 4443958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 514
Target Start/End: Complemental strand, 13033182 - 13033050
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| | || ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  13033182 atactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 13033083  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||||||||||||||| |||||||||    
T  13033082 aatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 519
Target Start/End: Original strand, 37148955 - 37149091
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||| | |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  37148955 tactccctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 37149054  T
Q  483 atgtctcttataaataggaccgaaggaagtattattt 519  Q
    || ||||||||||||||||||| ||| ||||||||||    
T  37149055 atttctcttataaataggaccggaggtagtattattt 37149091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 515
Target Start/End: Original strand, 36563536 - 36563670
Alignment:
Q  381 catactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgacca 480  Q
    ||||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  |||||||||||||     
T  36563536 catactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 36563635  T
Q  481 aaatgtctcttataaataggaccgaaggaagtatt 515  Q
    |||| |||||||||||||||| || ||| ||||||    
T  36563636 aaatttctcttataaataggatcggaggtagtatt 36563670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 519
Target Start/End: Original strand, 9395426 - 9395486
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||||||    
T  9395426 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattattt 9395486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 519
Target Start/End: Original strand, 13103100 - 13103160
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||||||    
T  13103100 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtattattt 13103160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 41989406 - 41989538
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  41989406 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41989505  T
Q  482 aatgtctcttataaataggaccgaaggaagtat 514  Q
    ||| ||||||| ||||||||||| ||| |||||    
T  41989506 aatttctcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 23359941 - 23360072
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| ||||||||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  23359941 atactacctctggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 23360037  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||||||||||||||||||| ||| ||||    
T  23360038 ccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 501
Target Start/End: Complemental strand, 9188618 - 9188501
Alignment:
Q  385 ctccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaac-ttttgttgaccaaaa 483  Q
    ||||||| | || ||||||||||||  ||||| || || |||| |||||| ||||||  |||| |||||||| ||||||| ||| ||||||||||  |||    
T  9188618 ctccctccgatcctatttataagaagcatttaagtaaataaaaagtgatgcatctgatcaagagtttggaccaaatacattaactttttgttgactcaaa 9188519  T
Q  484 tgtctcttataaatagga 501  Q
    | ||||||||||||||||    
T  9188518 tatctcttataaatagga 9188501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 516
Target Start/End: Complemental strand, 20848203 - 20848071
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| | |||| || ||||||||  ||||||||||   ||| ||||  | || |||||||  |||||| |||||| ||    
T  20848203 tactccctccggtcctatttataagaga-attttgggcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaa 20848105  T
Q  483 atgtctcttataaataggaccgaaggaagtatta 516  Q
    || ||||||||||||||||||| ||| |||||||    
T  20848104 atttctcttataaataggaccggaggtagtatta 20848071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 519
Target Start/End: Original strand, 13033127 - 13033187
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    ||||||||||||||||||||| |||  |||||||||||||||| || ||| ||||||||||    
T  13033127 atacatcaacttttgttgacccaaaattctcttataaataggatcggagggagtattattt 13033187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 503
Target Start/End: Complemental strand, 23360072 - 23359952
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    |||| |||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| ||    
T  23360072 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23359973  T
Q  483 atgtctcttataaataggacc 503  Q
    || ||||||||||||||||||    
T  23359972 atttctcttataaataggacc 23359952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 519
Target Start/End: Complemental strand, 36563592 - 36563532
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||| ||||    
T  36563592 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatgattt 36563532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 515
Target Start/End: Complemental strand, 41989461 - 41989405
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||||    
T  41989461 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 41989405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 520
Target Start/End: Complemental strand, 583085 - 582982
Alignment:
Q  417 ggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    |||||||||||  ||||||||||   ||| ||||  | || |||||||  |||| |||||||| |||| ||||||||||||||||||| ||| |||||||    
T  583085 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagtatta 582986  T
Q  517 tttt 520  Q
    ||||    
T  582985 tttt 582982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 501
Target Start/End: Complemental strand, 11795299 - 11795180
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    ||||||||||  ||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  11795299 atactccctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 11795200  T
Q  482 aatgtctcttataaatagga 501  Q
    ||| ||||||||||||||||    
T  11795199 aatttctcttataaatagga 11795180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 17025700 - 17025755
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| |||||    
T  17025700 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 501
Target Start/End: Original strand, 27081015 - 27081058
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaatagga 501  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  27081015 aatacatcaacttttgttgacctaaatgtctcttgtaaatagga 27081058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 441
Target Start/End: Complemental strand, 2629678 - 2629616
Alignment:
Q  379 aacatactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctga 441  Q
    |||||||| |||| |||| | ||||||||||||||||||||||||||||  | ||||||||||    
T  2629678 aacatacttcctccggtcttgtttataagaaatatttaggtcaacaaaagttaatgtatctga 2629616  T

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Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 6126900 - 6126954
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  6126900 atacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 415 - 504
Target Start/End: Original strand, 11574112 - 11574201
Alignment:
Q  415 taggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaataggaccg 504  Q
    |||||||||||||  | ||||||||   ||| || |||||||  |||  |||| ||||||||||| ||||||||||||||||||||||||    
T  11574112 taggtcaacaaaagttaatgtatctagttaacaaattggaccagatatttcaatttttgttgacctaaatgtctcttataaataggaccg 11574201  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 515
Target Start/End: Complemental strand, 17025755 - 17025622
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  |    |||||||  |||||||| |||| |    
T  17025755 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggaccta 17025656  T
Q  482 aatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||| ||||||||||||||||||| ||| ||||||    
T  17025655 aatttctcttataaataggaccggaggtagtatt 17025622  T

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Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 21576022 - 21576077
Alignment:
Q  459 atacatcaacttttgttga-ccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||    
T  21576022 atacatcaacttttgttgatccaaaat-tctcttataaataggaccggagggagtat 21576077  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 514
Target Start/End: Original strand, 37641952 - 37642085
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | ||||||||||| |||| |||| ||||| || |||  ||||||  | ||| |||||||||||||| |||||    
T  37641952 atactacctccggtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggact--gaatttttaactagatacatcaacttttattgac 37642049  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtat 514  Q
    | |||  ||||||||||||||||||| ||| |||||    
T  37642050 ccaaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 502
Target Start/End: Original strand, 11795244 - 11795287
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggac 502  Q
    ||||||||||||||||||||| |||  |||||||||||||||||    
T  11795244 atacatcaacttttgttgacccaaaattctcttataaataggac 11795287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 513
Target Start/End: Complemental strand, 37149086 - 37148955
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||||||||    
T  37149086 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgttgac 37148990  T
Q  479 caaaatgtctcttataaataggaccgaaggaagta 513  Q
    | |||  ||| ||||||||||||||| ||| ||||    
T  37148989 ccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Complemental strand, 9006936 - 9006894
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaatagga 501  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||    
T  9006936 atacatcaacttttgttgacctaaaagtctgttataaatagga 9006894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 513
Target Start/End: Original strand, 20848150 - 20848203
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    ||||||||| |||||||| ||||||| ||||||||||||||||||| ||| ||||    
T  20848150 atacatcaatttttgttgcccaaaat-tctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 469 - 519
Target Start/End: Complemental strand, 37641997 - 37641947
Alignment:
Q  469 ttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattattt 519  Q
    |||| |||||| |||| ||||||||||||||||||| ||| ||||||||||    
T  37641997 ttttattgacctaaatttctcttataaataggaccggaggtagtattattt 37641947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 507
Target Start/End: Complemental strand, 5174884 - 5174840
Alignment:
Q  463 atcaacttttgttgaccaaaatgtctcttataaataggaccgaag 507  Q
    ||||||||||||||| | |||||||||||||||||| || |||||    
T  5174884 atcaacttttgttgatctaaatgtctcttataaatatgatcgaag 5174840  T

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Target: scaffold0464 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 382 - 513
Target Start/End: Original strand, 6130 - 6261
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| |||||||||||||  ||| |||||||||||  ||||||||||   ||| ||||  | ||  ||||||  ||||||||||||| |    
T  6130 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgaccta 6229  T
Q  482 aatgtctcttataaataggaccgaaggaagta 513  Q
    ||| ||||||||||||||||||| ||| ||||    
T  6230 aatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 459 - 522
Target Start/End: Complemental strand, 6185 - 6122
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtattattttgt 522  Q
    ||||||||||||||||||||| |||  | ||||||||||||||||| ||| |||||||||||||    
T  6185 atacatcaacttttgttgacccaaaattttcttataaataggaccggagggagtattattttgt 6122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 515
Target Start/End: Complemental strand, 12991 - 12858
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaa 481  Q
    |||||||||| |||| ||||||||||| |  ||| ||||| |||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |    
T  12991 atactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 12892  T
Q  482 aatgtctcttataaataggaccgaaggaagtatt 515  Q
    ||| ||||||||||||||||||| ||| ||||||    
T  12891 aatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 516
Target Start/End: Original strand, 12859 - 12993
Alignment:
Q  382 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtga-tgtatctg-actaagaatttggaccta-atacatcaacttttgttgac 478  Q
    ||||| |||| |||| ||||||||||| | |||||||||||||||| |||| ||||| || |||  ||||||  | ||| ||||||||||||||| ||||    
T  12859 atactacctccggtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggact--gaatttttaactagatacatcaacttttgctgac 12955  T
Q  479 caaaatgtctcttataaataggaccgaaggaagtatta 516  Q
    | |||  ||||||||||||||||||| ||| |||||||    
T  12956 ccaaaattctcttataaataggaccggagggagtatta 12993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 383 - 515
Target Start/End: Complemental strand, 49635 - 49503
Alignment:
Q  383 tactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaa 482  Q
    ||||||||| |||| ||||||||||| |  ||| |||||||||||  |||||||| |   ||| ||||  | || |||||||  ||||||||||||| ||    
T  49635 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaa 49536  T
Q  483 atgtctcttataaataggaccgaaggaagtatt 515  Q
    || ||||||||||||||||||| ||| ||||||    
T  49535 atttctcttataaataggaccggaggtagtatt 49503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 513
Target Start/End: Original strand, 49580 - 49635
Alignment:
Q  458 aatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagta 513  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||    
T  49580 aatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 504
Target Start/End: Complemental strand, 1450 - 1344
Alignment:
Q  398 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaat 497  Q
    ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | || |||||||  ||||||||||||| |||| ||||||||||||    
T  1450 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 1351  T
Q  498 aggaccg 504  Q
    |||||||    
T  1350 aggaccg 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 501
Target Start/End: Original strand, 1411 - 1453
Alignment:
Q  459 atacatcaacttttgttgaccaaaatgtctcttataaatagga 501  Q
    ||||||||||||||||||||| |||  ||||||||||||||||    
T  1411 atacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 514
Target Start/End: Original strand, 20 - 115
Alignment:
Q  418 gtcaacaaaatgtgatgtatctgactaagaatttggacctaatacatcaacttttgttgaccaaaatgtctcttataaataggaccgaaggaagtat 514  Q
    ||||||||||  |||||||| ||  ||| ||||| | || ||||||||||||||||||||||||  | |||| ||||||||| |||| ||| |||||    
T  20 gtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagtat 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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