View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8228_high_34 (Length: 241)
Name: NF8228_high_34
Description: NF8228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8228_high_34 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 683885 - 684110
Alignment:
| Q |
1 |
catgttggtgttgaacttatgcttgatttcttcaatatgcaaaacccttcttgtgttcatgatttggatacttatattggtcttcttagatgccctaaaa |
100 |
Q |
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| T |
683885 |
catgttggtgttgaacttatgcttgatttcttcaatatgcaaaacccttcttgtgttcatgatttggatacttatattggtcttcttagatgccctaaaa |
683984 |
T |
|
| Q |
101 |
agaagattgaagaagtgattcatagtcaaagtgatggtggtggagtcaactttttgttggagaaggcaaggatgtttctattgaaatcatcaatatcaca |
200 |
Q |
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| T |
683985 |
aaaagattgaagaagtgattcatagtcaaagtgatggtggtggagtcaactttttgttggagaaggcaaggatgtttctattgaaatcatcaatatcaca |
684084 |
T |
|
| Q |
201 |
agtttttgcagctggaggtggtaact |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
684085 |
agtttttgcagctggaggtggtaact |
684110 |
T |
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