View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8228_low_33 (Length: 257)

Name: NF8228_low_33
Description: NF8228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8228_low_33
NF8228_low_33
[»] chr3 (37 HSPs)
chr3 (131-257)||(45302445-45302570)
chr3 (36-131)||(49607413-49607508)
chr3 (36-130)||(53982011-53982105)
chr3 (36-130)||(33644200-33644294)
chr3 (51-137)||(36707445-36707531)
chr3 (36-132)||(17470403-17470499)
chr3 (36-131)||(33118857-33118952)
chr3 (36-131)||(54868901-54868996)
chr3 (47-125)||(52629305-52629383)
chr3 (54-131)||(11095377-11095454)
chr3 (36-131)||(27714897-27714992)
chr3 (36-130)||(8076393-8076487)
chr3 (36-126)||(30801739-30801829)
chr3 (36-129)||(31456690-31456783)
chr3 (36-130)||(26141538-26141632)
chr3 (36-132)||(9562997-9563093)
chr3 (48-131)||(11347940-11348023)
chr3 (36-125)||(26754700-26754789)
chr3 (41-126)||(48587102-48587187)
chr3 (36-137)||(48375712-48375813)
chr3 (36-130)||(14623845-14623939)
chr3 (48-132)||(24699972-24700056)
chr3 (36-132)||(35536624-35536720)
chr3 (36-130)||(51419366-51419460)
chr3 (36-133)||(8956759-8956856)
chr3 (36-129)||(13898061-13898154)
chr3 (36-131)||(11907370-11907465)
chr3 (62-131)||(35965806-35965875)
chr3 (68-132)||(36331416-36331480)
chr3 (62-130)||(47531865-47531933)
chr3 (47-130)||(20764932-20765015)
chr3 (36-123)||(35093592-35093679)
chr3 (65-130)||(45058588-45058652)
chr3 (40-103)||(25413784-25413846)
chr3 (36-131)||(1758462-1758559)
chr3 (48-130)||(41080709-41080790)
chr3 (36-127)||(25407153-25407245)
[»] chr8 (30 HSPs)
chr8 (36-130)||(12831047-12831141)
chr8 (36-130)||(504127-504221)
chr8 (36-130)||(15197333-15197427)
chr8 (36-130)||(40423949-40424043)
chr8 (36-131)||(14547921-14548016)
chr8 (36-133)||(37038476-37038573)
chr8 (36-131)||(10284637-10284732)
chr8 (47-130)||(23122614-23122697)
chr8 (36-130)||(34012302-34012396)
chr8 (47-133)||(44507104-44507190)
chr8 (36-129)||(5957831-5957924)
chr8 (51-130)||(1179961-1180040)
chr8 (47-130)||(14055609-14055692)
chr8 (36-130)||(15048188-15048281)
chr8 (40-132)||(17443823-17443915)
chr8 (36-111)||(8841438-8841513)
chr8 (60-125)||(10621117-10621182)
chr8 (65-130)||(30479509-30479574)
chr8 (36-131)||(42221514-42221609)
chr8 (65-131)||(16383376-16383442)
chr8 (65-131)||(34307215-34307281)
chr8 (36-130)||(43414587-43414681)
chr8 (62-130)||(20074966-20075034)
chr8 (65-133)||(32032722-32032789)
chr8 (36-129)||(9122196-9122279)
chr8 (67-131)||(4854900-4854964)
chr8 (67-131)||(24307628-24307692)
chr8 (67-131)||(24307830-24307894)
chr8 (48-131)||(15258947-15259030)
chr8 (65-131)||(16056436-16056502)
[»] chr7 (39 HSPs)
chr7 (36-134)||(36361919-36362017)
chr7 (36-135)||(36362021-36362120)
chr7 (36-130)||(38267040-38267134)
chr7 (36-131)||(7389388-7389483)
chr7 (36-130)||(35137533-35137627)
chr7 (36-135)||(3434557-3434656)
chr7 (36-131)||(8080389-8080484)
chr7 (36-130)||(4999520-4999614)
chr7 (51-131)||(19436208-19436288)
chr7 (51-131)||(40957706-40957786)
chr7 (36-131)||(38837216-38837311)
chr7 (36-130)||(19329842-19329936)
chr7 (36-129)||(32951499-32951592)
chr7 (36-127)||(3783998-3784089)
chr7 (36-127)||(3694370-3694461)
chr7 (36-130)||(21234401-21234495)
chr7 (41-131)||(38044196-38044286)
chr7 (41-130)||(8238212-8238302)
chr7 (36-130)||(46374808-46374902)
chr7 (41-130)||(39255935-39256023)
chr7 (65-133)||(22343358-22343426)
chr7 (41-133)||(26296641-26296733)
chr7 (40-130)||(40846123-40846213)
chr7 (65-133)||(41915738-41915806)
chr7 (64-131)||(10343597-10343664)
chr7 (51-137)||(12310899-12310983)
chr7 (36-131)||(18207179-18207273)
chr7 (48-131)||(36208172-36208255)
chr7 (86-131)||(11044187-11044232)
chr7 (36-101)||(16374830-16374895)
chr7 (56-132)||(46033827-46033903)
chr7 (62-125)||(35522881-35522944)
chr7 (41-131)||(7727905-7727995)
chr7 (65-130)||(32564461-32564526)
chr7 (69-131)||(35468894-35468956)
chr7 (61-131)||(45223041-45223111)
chr7 (51-96)||(27744330-27744375)
chr7 (107-135)||(8080296-8080324)
chr7 (74-130)||(31735884-31735940)
[»] chr1 (34 HSPs)
chr1 (36-130)||(9474882-9474976)
chr1 (36-131)||(2581914-2582009)
chr1 (36-130)||(48716288-48716382)
chr1 (36-131)||(38632327-38632422)
chr1 (36-132)||(50630456-50630552)
chr1 (47-130)||(3000319-3000402)
chr1 (36-137)||(51898689-51898790)
chr1 (47-131)||(38595153-38595237)
chr1 (36-132)||(41758803-41758899)
chr1 (36-127)||(44548382-44548473)
chr1 (36-130)||(27564741-27564835)
chr1 (36-130)||(47452326-47452420)
chr1 (48-131)||(8346406-8346489)
chr1 (36-130)||(43132-43226)
chr1 (36-131)||(32813246-32813341)
chr1 (41-129)||(11152389-11152476)
chr1 (36-104)||(13414787-13414855)
chr1 (60-131)||(49811557-49811628)
chr1 (53-130)||(37649198-37649275)
chr1 (51-127)||(26274435-26274511)
chr1 (36-131)||(23597097-23597192)
chr1 (36-125)||(44453984-44454073)
chr1 (65-130)||(50591035-50591100)
chr1 (36-131)||(45044566-45044661)
chr1 (36-130)||(3302539-3302633)
chr1 (41-131)||(5959011-5959101)
chr1 (62-123)||(26440741-26440802)
chr1 (36-99)||(44334176-44334239)
chr1 (40-133)||(7740730-7740823)
chr1 (65-130)||(41608528-41608593)
chr1 (62-125)||(34340071-34340133)
chr1 (40-100)||(750243-750302)
chr1 (62-134)||(37926470-37926542)
chr1 (36-84)||(48489346-48489394)
[»] chr4 (38 HSPs)
chr4 (47-131)||(480464-480548)
chr4 (36-131)||(29239885-29239980)
chr4 (36-130)||(41236347-41236441)
chr4 (36-131)||(48183055-48183150)
chr4 (36-131)||(50052434-50052529)
chr4 (36-130)||(11511468-11511562)
chr4 (36-130)||(54473539-54473633)
chr4 (36-132)||(29234251-29234347)
chr4 (36-130)||(3481654-3481748)
chr4 (36-130)||(6034044-6034138)
chr4 (36-131)||(23608234-23608329)
chr4 (36-131)||(42044373-42044468)
chr4 (36-131)||(24995113-24995208)
chr4 (51-130)||(50526192-50526271)
chr4 (36-130)||(31910192-31910286)
chr4 (36-134)||(28480274-28480372)
chr4 (36-134)||(28481149-28481247)
chr4 (36-134)||(28482024-28482122)
chr4 (36-131)||(29977884-29977979)
chr4 (63-130)||(40574779-40574846)
chr4 (65-132)||(47986206-47986273)
chr4 (65-131)||(55475190-55475256)
chr4 (65-130)||(18924530-18924595)
chr4 (41-125)||(53352577-53352660)
chr4 (65-131)||(19670751-19670817)
chr4 (36-130)||(29535377-29535470)
chr4 (44-132)||(44536760-44536847)
chr4 (65-133)||(50813927-50813995)
chr4 (36-131)||(47104543-47104638)
chr4 (65-131)||(29547994-29548060)
chr4 (65-131)||(32766957-32767023)
chr4 (36-82)||(41823930-41823976)
chr4 (65-130)||(55079749-55079814)
chr4 (65-112)||(17983778-17983825)
chr4 (36-131)||(48647732-48647827)
chr4 (65-130)||(8343198-8343263)
chr4 (40-125)||(18769114-18769199)
chr4 (41-122)||(29589751-29589831)
[»] chr2 (31 HSPs)
chr2 (36-132)||(7465741-7465837)
chr2 (36-132)||(32505654-32505750)
chr2 (36-131)||(10249388-10249483)
chr2 (36-127)||(19930826-19930917)
chr2 (36-130)||(13438343-13438437)
chr2 (36-133)||(28863452-28863549)
chr2 (36-131)||(9058479-9058574)
chr2 (36-131)||(33436106-33436201)
chr2 (47-131)||(38882831-38882914)
chr2 (51-130)||(4060685-4060764)
chr2 (47-130)||(27864704-27864787)
chr2 (36-130)||(17473020-17473114)
chr2 (36-130)||(40701478-40701572)
chr2 (36-132)||(5574494-5574590)
chr2 (47-131)||(30915462-30915546)
chr2 (36-130)||(28381661-28381755)
chr2 (47-131)||(20700814-20700898)
chr2 (36-130)||(40613908-40614002)
chr2 (36-130)||(17820010-17820104)
chr2 (49-131)||(26891523-26891605)
chr2 (65-130)||(43490121-43490186)
chr2 (36-132)||(2533122-2533217)
chr2 (47-131)||(38273159-38273243)
chr2 (62-133)||(33436208-33436279)
chr2 (47-129)||(41575138-41575220)
chr2 (41-130)||(38732354-38732443)
chr2 (41-132)||(36168834-36168925)
chr2 (36-131)||(42257192-42257287)
chr2 (36-124)||(3439985-3440073)
chr2 (65-112)||(2997522-2997569)
chr2 (65-131)||(45097770-45097836)
[»] chr5 (33 HSPs)
chr5 (36-130)||(40145407-40145501)
chr5 (36-127)||(18520890-18520981)
chr5 (36-132)||(2740272-2740368)
chr5 (36-131)||(36732948-36733043)
chr5 (36-131)||(13811651-13811746)
chr5 (36-130)||(14831814-14831908)
chr5 (36-130)||(28177775-28177869)
chr5 (36-130)||(33149644-33149738)
chr5 (36-130)||(35785199-35785293)
chr5 (36-130)||(42414308-42414402)
chr5 (36-130)||(35943898-35943992)
chr5 (36-132)||(6679696-6679792)
chr5 (36-131)||(15409616-15409711)
chr5 (41-132)||(41470427-41470518)
chr5 (36-131)||(31008987-31009082)
chr5 (71-129)||(36875644-36875702)
chr5 (65-131)||(3921300-3921366)
chr5 (65-134)||(2252203-2252272)
chr5 (44-130)||(6260015-6260101)
chr5 (36-130)||(26720516-26720610)
chr5 (36-130)||(26990265-26990359)
chr5 (41-85)||(31132389-31132433)
chr5 (36-131)||(9603812-9603907)
chr5 (36-131)||(38296202-38296297)
chr5 (62-130)||(33825356-33825424)
chr5 (67-131)||(39688934-39688998)
chr5 (67-125)||(10356639-10356698)
chr5 (48-130)||(20073534-20073616)
chr5 (36-82)||(21370052-21370098)
chr5 (36-129)||(16327902-16327995)
chr5 (36-81)||(25831334-25831379)
chr5 (40-100)||(22512408-22512467)
chr5 (36-84)||(39557523-39557571)
[»] chr6 (22 HSPs)
chr6 (36-130)||(32869678-32869772)
chr6 (36-127)||(22880664-22880755)
chr6 (47-130)||(31109417-31109500)
chr6 (36-130)||(17598554-17598648)
chr6 (36-133)||(11427613-11427712)
chr6 (47-131)||(6209482-6209566)
chr6 (36-127)||(23128133-23128224)
chr6 (51-131)||(15832576-15832656)
chr6 (36-133)||(31976245-31976342)
chr6 (51-130)||(29857827-29857906)
chr6 (36-130)||(31953036-31953130)
chr6 (54-129)||(946377-946452)
chr6 (36-126)||(28536494-28536582)
chr6 (65-131)||(15990077-15990143)
chr6 (65-131)||(30341395-30341461)
chr6 (65-130)||(15508059-15508124)
chr6 (48-131)||(31110779-31110860)
chr6 (36-125)||(9379718-9379807)
chr6 (40-104)||(24203921-24203984)
chr6 (41-130)||(4231548-4231637)
chr6 (62-131)||(12732481-12732550)
chr6 (96-133)||(22422084-22422121)
[»] scaffold0321 (1 HSPs)
scaffold0321 (49-131)||(10128-10210)
[»] scaffold1268 (1 HSPs)
scaffold1268 (36-130)||(935-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (36-130)||(935-1029)
[»] scaffold0110 (1 HSPs)
scaffold0110 (41-130)||(8874-8963)
[»] scaffold0237 (1 HSPs)
scaffold0237 (51-130)||(4029-4108)
[»] scaffold0018 (1 HSPs)
scaffold0018 (40-114)||(152514-152588)
[»] scaffold0316 (1 HSPs)
scaffold0316 (36-84)||(17100-17148)


Alignment Details
Target: chr3 (Bit Score: 94; Significance: 6e-46; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 45302445 - 45302570
Alignment:
Q  131 tatatttgtgattattannnnnnnactaatattcaaactaaattccgagctattttaaatgaagcttcataaacgaacaaggagctggggcaattaattg 230  Q
    |||||||||||||||||       ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45302445 tatatttgtgattattatttttttacttatattcaaactaaattccgagctattttaa-tgaagcttcataaacgaacaaggagctggggcaattaattg 45302543  T
Q  231 tacgaaaagcatgtgtatggtttttca 257  Q
    |||||||||||||||||||||||||||    
T  45302544 tacgaaaagcatgtgtatggtttttca 45302570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 49607508 - 49607413
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  49607508 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 49607413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 53982105 - 53982011
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  53982105 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 33644294 - 33644200
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||    
T  33644294 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 36707445 - 36707531
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctatattt 137  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  36707445 tccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactctttattt 36707531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 17470499 - 17470403
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | | ||| ||||||||| ||||||| |||||||||||||||||||||||    
T  17470499 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactcta 17470403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 33118857 - 33118952
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||| || ||| ||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||    
T  33118857 tgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactct 33118952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 54868901 - 54868996
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  54868901 tgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactct 54868996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 52629383 - 52629305
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcat 125  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  52629383 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 11095377 - 11095454
Alignment:
Q  54 acgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11095377 acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 11095454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 27714897 - 27714992
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||||  ||||||| ||||||||||||||||||||||    
T  27714897 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattactct 27714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 8076487 - 8076393
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||| || ||||||||||||| |||||||||||||||    
T  8076487 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 30801739 - 30801829
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatt 126  Q
    |||| ||||||||||||||  ||||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  30801739 tgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 31456783 - 31456690
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattact 129  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||||| | |||| |||||||||||||||||||||    
T  31456783 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 26141538 - 26141632
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||| | | ||||||||||||| ||||||||| |||||||||||||| ||||    
T  26141538 tgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 9563093 - 9562997
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    ||||||||||  || |||||||||||||||||||||||||| | ||||| ||||||| |||||||||| |||| ||||| |||||||||||||||||    
T  9563093 tgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactcta 9562997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 11347940 - 11348023
Alignment:
Q  48 gggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||| ||| | ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||||    
T  11347940 gggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactct 11348023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 26754789 - 26754700
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcat 125  Q
    |||| ||||| |||||||| ||||| || |||||||||||||||||||| || |||||||||||| |||||||||||||||||| |||||    
T  26754789 tgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 48587102 - 48587187
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatt 126  Q
    ||||| ||| |||||||||||||||||||||||||| ||| | | ||||||||||||||| ||||||||||| |||||||||||||    
T  48587102 ttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 48375712 - 48375813
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctatat 135  Q
    |||| ||||| |||||||| ||||| ||  ||||||||||||| ||||| |  | ||||||||||||||||||||||||||||| ||||| |||||||||    
T  48375712 tgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataactctatat 48375811  T
Q  136 tt 137  Q
    ||    
T  48375812 tt 48375813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 14623845 - 14623939
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||||| ||||||| |||  || |||||||||||| ||||| | |||| |||||||||| ||||||||| |||||||||||||||||||    
T  14623845 tgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 24699972 - 24700056
Alignment:
Q  48 gggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    ||||||||||| | ||||| ||||||||| ||||| | ||||| ||||||||| || |||||| |||||||||||||||||||||    
T  24699972 gggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactcta 24700056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 35536720 - 35536624
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||| ||||||  ||||||| |||| |||||||| |||||| ||||| | ||||| ||||||||| ||| ||||| |||||||||||||||||||||    
T  35536720 tgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactcta 35536624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 51419366 - 51419460
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||| | ||| | ||||||||||||||||||||| | | ||||| |||||||||| |||||| |||||||||||||| ||||    
T  51419366 tgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 8956856 - 8956759
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    |||| ||||||  ||||||| |||  |||||||| |||||| ||||| | ||||||| ||||||| ||| ||||| ||||||||||||||||||||||    
T  8956856 tgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactctat 8956759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 13898061 - 13898154
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattact 129  Q
    |||| ||||||| ||||||| |||  ||||||||||||||| ||||| | |||| |||||||||| ||||||||| ||| ||| ||||||||||    
T  13898061 tgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 11907465 - 11907370
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| ||||||||  |||| || |||||||||||||||||  | |  | | ||||||||||||||||||||||||||||||||| |||||    
T  11907465 tgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataactct 11907370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 35965806 - 35965875
Alignment:
Q  62 acgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||||| ||||| | ||||||| |||||| |||| ||||| ||| ||||||||||||||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactct 35965875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 36331416 - 36331480
Alignment:
Q  68 cagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    ||||||||||||||||| |||| ||||| |||| || |||||||||| |||||||||| ||||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactcta 36331480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 47531933 - 47531865
Alignment:
Q  62 acgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||| |||||||||| | ||| ||||||||| || |||||| |||||||||||||| ||||    
T  47531933 acgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 20764932 - 20765015
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||| ||| | ||||||||||||||||||||| | | |||| |||||||  ||||||||| ||||||||| |||| ||||    
T  20764932 ggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 35093679 - 35093592
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatc 123  Q
    |||| |||| ||| || ||| |||| || ||||||||||||| |||||| ||||| | ||||||||||||||| | ||||||||||||    
T  35093679 tgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatc 35093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 45058588 - 45058652
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||| ||||| | |||| |||||||||| ||||||||||||| |||||||||| ||||    
T  45058588 tgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 25413784 - 25413846
Alignment:
Q  40 tttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtca 103  Q
    ||||||||||||||| || || |||||||||| |||||||||| | | ||||||||||||||||    
T  25413784 tttgtgtggggtccaggttaccacgtgtcagagttttgtgtgggtgt-aaagggtgtattgtca 25413846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 1758462 - 1758559
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaa--agggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||| |||||||| || |  |||||||||||||||||| | ||||   ||||||||||  ||||| || || ||||||||||| |||||    
T  1758462 tgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatcataactct 1758559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 41080790 - 41080709
Alignment:
Q  48 gggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||| |||| || | ||||||||||| |||| | ||||||||||| |||  || ||||| |||||||||||||||||||    
T  41080790 gggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgctac-taaggatgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 25407153 - 25407245
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcaga-tttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatta 127  Q
    |||||||||||||| ||||  |||  |||||||||| ||||||||||  | |||| |||| ||||| |||||| || ||| ||||||||||||    
T  25407153 tgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 12831141 - 12831047
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  12831141 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 504127 - 504221
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||||||||    
T  504127 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 15197427 - 15197333
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||| ||||||||||||||||||||    
T  15197427 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 40423949 - 40424043
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  40423949 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 14548016 - 14547921
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||| |||||||    
T  14548016 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctttactct 14547921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 37038573 - 37038476
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  37038573 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactctat 37038476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 10284637 - 10284732
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||| | |||||| |||||||||||| |||||||||||||||||||| |||||    
T  10284637 tgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactct 10284732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 23122614 - 23122697
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||| |||||||||||||||||||||||||    
T  23122614 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 34012302 - 34012396
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| ||||||||||||||||||| |||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||    
T  34012302 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 44507104 - 44507190
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    |||||||||||||||||||||||||||||||||||| | | |||| |||||||  ||||||||||||||||||||||||||||||||    
T  44507104 ggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactctat 44507190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 5957924 - 5957831
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattact 129  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||  ||||||||||||||||||    
T  5957924 tgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 1179961 - 1180040
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||    
T  1179961 tccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 14055609 - 14055692
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||||||||||||||| ||| |||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||| ||||    
T  14055609 ggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 15048188 - 15048281
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||| ||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  15048188 tgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 17443915 - 17443823
Alignment:
Q  40 tttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||||||||||||||| ||||||| |||||||||||||||||  | | ||   |||||||||||||||||| |||||||||||||| ||||||    
T  17443915 tttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactcta 17443823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 8841438 - 8841513
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaaggg 111  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||| || ||||||||||    
T  8841438 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 10621117 - 10621182
Alignment:
Q  60 ctacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcat 125  Q
    ||||||||||||||||||||||| | ||||||||||||||  ||||||||| ||||||||||||||    
T  10621117 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 30479509 - 30479574
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 42221609 - 42221514
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| |||| |||||||||  ||| |||||||||||||||||||||| | || | |  ||||||||||||||||| ||| ||||||||||||||||    
T  42221609 tgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactct 42221514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 16383442 - 16383376
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||| |||||    
T  16383442 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 16383376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 34307281 - 34307215
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||| |||||    
T  34307281 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 34307215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 43414587 - 43414681
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| |||| ||||| |||||| |||||||||||||| | ||||||||||| ||| || |||||| |||||||||||||| ||||    
T  43414587 tgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 20074966 - 20075034
Alignment:
Q  62 acgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||| |||||| ||||| | |||||| |||||||| ||||||||| |||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 32032789 - 32032722
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    |||||||||||||||||||| |||| || ||||||| ||||||||||||| |||||||||| |||||||    
T  32032789 tgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatcataactctat 32032722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 9122279 - 9122196
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattact 129  Q
    |||| ||||| ||| ||||||||||||| ||||||||||||||||||          |||||||| ||||||||||||||||||||||||||||    
T  9122279 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgg----------gtgtattgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 4854900 - 4854964
Alignment:
Q  67 tcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||| ||| | | | ||||||||||||| ||||||||| ||||||||||||||||||||    
T  4854900 tcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactct 4854964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 24307692 - 24307628
Alignment:
Q  67 tcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||| | |||| || ||||||| ||||||||||||| |||||||||| |||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactct 24307628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 24307830 - 24307894
Alignment:
Q  67 tcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||| | |||| || ||||||| ||||||||||||| |||||||||| |||||    
T  24307830 tcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactct 24307894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 15258947 - 15259030
Alignment:
Q  48 gggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||| || |||||||||||| ||||||| || | || ||||||| || ||||| || |||||||||||| |||||    
T  15258947 gggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactct 15259030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 16056436 - 16056502
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||| | |||| || ||||||||||| ||||| ||| |||||||||| |||||    
T  16056436 tgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactct 16056502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 36361919 - 36362017
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctata 134  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  36361919 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactctata 36362017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 36362120 - 36362021
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctatat 135  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  36362120 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactctatat 36362021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 38267134 - 38267040
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||    
T  38267134 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 7389483 - 7389388
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||||||    
T  7389483 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactct 7389388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 35137627 - 35137533
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||| |||||||||||    
T  35137627 tgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 3434656 - 3434557
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctatat 135  Q
    |||| ||||| ||| |||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  3434656 tgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctatat 3434557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 8080389 - 8080484
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||| | | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  8080389 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 8080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 4999520 - 4999614
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| | ||||| ||||||||| || ||||||||||||||||||||||||||    
T  4999520 tgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 19436208 - 19436288
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  19436208 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactct 19436288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 40957786 - 40957706
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||    
T  40957786 tccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactct 40957706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 38837311 - 38837216
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| | | |  |||||||||||| ||||||||||||||||||||||||||||||    
T  38837311 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactct 38837216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 19329936 - 19329842
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||| | ||||| ||||||||| ||||||||| |||||||||||||||||||    
T  19329936 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 32951499 - 32951592
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattact 129  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||| | ||||| |||||||||| ||||| |||||||||||||||||||    
T  32951499 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 3784089 - 3783998
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatta 127  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||| | ||||| | ||||||| ||||||||||||||||||||||||||    
T  3784089 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 3694461 - 3694370
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatta 127  Q
    |||| ||||| ||| ||||| |||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||| ||| ||||||||    
T  3694461 tgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcatta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 21234495 - 21234401
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||||| || ||| |||||||||| |||||||||||  | ||||||||||||||||||||||||| |||||||||||||| ||||    
T  21234495 tgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 38044286 - 38044196
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||| ||||||||  || |||| |||||||||||||||||||| |||| |||||||||| ||||||||||||| |||||||||| |||||    
T  38044286 ttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 38044196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 8238302 - 8238212
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcaccta-agggtgtctatgtatcattactc 130  Q
    ||||| ||||||||  ||||||| |||||||||||||||||| | ||||||||||||||| |||||| ||||||| |||||||||| ||||    
T  8238302 ttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactc 8238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||| ||| | ||||||||||||||||||||| | | ||||||||| ||| ||||||||| |||||||||||||| ||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 39255935 - 39256023
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||| ||||||||| | ||||||||||||||||| ||| ||||||  ||||||||| ||||||||| |||||||||||||| ||||    
T  39255935 ttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 22343426 - 22343358
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||| |||||||    
T  22343426 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctat 22343358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 26296733 - 26296641
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    ||||| ||||||||  || | |||| |||||||||| ||||||| | ||||||| ||||||||||||||| |||||||||||||| |||||||    
T  26296733 ttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactctat 26296641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 40846123 - 40846213
Alignment:
Q  40 tttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||| ||||||||  | ||||| ||| |||||||||||||||| |||| |||||||||| ||||||||| ||| |||||||||| ||||    
T  40846123 tttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 41915806 - 41915738
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    |||||||||||||||| | | |||| |||||||||| ||||||||||||| |||||||||| |||||||    
T  41915806 tgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctat 41915738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 10343597 - 10343664
Alignment:
Q  64 gtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||||||||| | ||||   |||||||  ||||||||||||||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactct 10343664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 12310983 - 12310899
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctatattt 137  Q
    |||||||||| || |||||||||||||| |||||||| |  | | ||||  |||||||||||||||||||||||| |||||||||||    
T  12310983 tccacgtgaccacatgtcagatttttgtatggatatcca--gatatatttccacctaagggtgtctatgtatcataactctatattt 12310899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 18207273 - 18207179
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||||||||| |||||| | |||||| |||||||||| ||| | ||||  ||||||||| ||||||||| |||||||||||||| |||||    
T  18207273 tgtgcttgtgtggggttcacgtgcc-acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactct 18207179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 36208255 - 36208172
Alignment:
Q  48 gggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||| || |||||| ||||||||||| | |||| |  ||||||  |||||||||||||||||||||||| |||||    
T  36208255 gggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataactct 36208172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 11044232 - 11044187
Alignment:
Q  86 tcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  11044232 tcaaaggatgtattgccacctaagggtgtctatgtatcattactct 11044187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 16374830 - 16374895
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgt 101  Q
    |||| ||||||| | |||||||||| ||||||||||||||||||||||| |||| || ||||||||    
T  16374830 tgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattgt 16374895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 46033827 - 46033903
Alignment:
Q  56 gtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    ||||| ||||||||||||||| ||||| | | ||||||||||||| ||||||||  | |||||||||||| ||||||    
T  46033827 gtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactcta 46033903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 35522944 - 35522881
Alignment:
Q  62 acgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcat 125  Q
    ||||||||||||||||||||| | | ||| ||||||||| ||| ||||| ||||||||||||||    
T  35522944 acgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 7727995 - 7727905
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||| ||||||||  |||| || |||||||||||| |||| || ||||  ||||||||  ||||||||||||| |||||||||| |||||    
T  7727995 ttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactct 7727905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 32564461 - 32564526
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||  ||| |||||||||| ||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 35468894 - 35468956
Alignment:
Q  69 agatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||| ||||| | ||||| | ||||||| || |||||| ||||||||||||||||||||    
T  35468894 agatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactct 35468956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 45223111 - 45223041
Alignment:
Q  61 tacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||||| ||| |  |||  ||||||| ||||||||| ||| ||| ||||||||||||    
T  45223111 tacgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactct 45223041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 27744330 - 27744375
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgt 96  Q
    |||||||| | || |||||||||||||||||| |||||||||||||    
T  27744330 tccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 135
Target Start/End: Complemental strand, 8080324 - 8080296
Alignment:
Q  107 aagggtgtctatgtatcattactctatat 135  Q
    |||||||||||||||||||||||||||||    
T  8080324 aagggtgtctatgtatcattactctatat 8080296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 130
Target Start/End: Complemental strand, 31735940 - 31735884
Alignment:
Q  74 tttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||||||| | | |||| |||||||| ||||||||| |||||||||||||| ||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 9474882 - 9474976
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  9474882 tgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 2582009 - 2581914
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  2582009 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 2581914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 48716288 - 48716382
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||    
T  48716288 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 38632327 - 38632422
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||||    
T  38632327 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactct 38632422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 50630552 - 50630456
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| || |||||| ||||||| ||||||||||| |||||||||||||||||||    
T  50630552 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactcta 50630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 3000402 - 3000319
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||||||||    
T  3000402 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 51898689 - 51898790
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctatat 135  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| | ||||||||||||||||||||| ||    
T  51898689 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactctaaat 51898788  T
Q  136 tt 137  Q
    ||    
T  51898789 tt 51898790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 38595237 - 38595153
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  38595237 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactct 38595153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 41758899 - 41758803
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||| | ||||||||||||||| ||  ||| |||||||||||||||||||||||    
T  41758899 tgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactcta 41758803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 44548382 - 44548473
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatta 127  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||    
T  44548382 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 27564741 - 27564835
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||| | ||||| ||||||||| ||||||||| |||||||||||||||||||    
T  27564741 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 47452326 - 47452420
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| ||||||||||||||||| |||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||    
T  47452326 tgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 8346406 - 8346489
Alignment:
Q  48 gggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||||| |||| |||||||||||||||||    
T  8346406 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactct 8346489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 43226 - 43132
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| || ||||||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||||  |||||||||||||||||||    
T  43226 tgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 32813341 - 32813246
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||| ||||| ||||||||||||||||||||| | | ||||||||||||| ||||||||| |||||||||||||| |||||    
T  32813341 tgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactct 32813246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 11152389 - 11152476
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattact 129  Q
    ||||| |||||| || |||||||||||||||||||||||||||| || |||||||||||| ||||||| ||||||||||| ||||||||    
T  11152389 ttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa-ggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 13414855 - 13414787
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcac 104  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||    
T  13414855 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgtcac 13414787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 49811557 - 49811628
Alignment:
Q  60 ctacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| |||||| |||||    
T  49811557 ctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactct 49811628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 37649275 - 37649198
Alignment:
Q  53 cacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||| ||||||||||||||||||||| | |||||| |||||||| ||||||| | |||||||||||||||||||    
T  37649275 cacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 26274511 - 26274435
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatta 127  Q
    |||||||||||| ||||||||||||| ||||||| ||||| | ||||||| ||| ||||||||||||||||||||||    
T  26274511 tccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcatta 26274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 23597097 - 23597192
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||   |||| ||||| | ||||||||||||||| ||||| |||||||| |||||||| ||||||| | ||||||||||||||||||||    
T  23597097 tgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactct 23597192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 44454073 - 44453984
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcat 125  Q
    |||| ||||||||| ||||||| || || |||||||||||||||||| ||||||  | ||||||| ||| ||| ||||||||||||||||    
T  44454073 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 50591035 - 50591100
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||| ||||    
T  50591035 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 45044566 - 45044661
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||| |||||||| ||| |||| |||||||||||||| ||| | ||||| ||||||||| |||||||||   | |||||||||| |||||    
T  45044566 tgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactct 45044661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 3302539 - 3302633
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| |||| |||||||||  ||| |||||||||||||||||||||| | || | |  | ||||||||||||||| ||| |||||||||||||||    
T  3302539 tgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactc 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 5959011 - 5959101
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||| ||||||||  |||| || |||||||||||||||||| | ||||  ||||||||| ||| ||||||||| |||||||||| |||||    
T  5959011 ttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactct 5959101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 26440802 - 26440741
Alignment:
Q  62 acgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatc 123  Q
    ||||||||||||||||||||| | | |||||||||||||||| |||||| ||||||| ||||    
T  26440802 acgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 44334176 - 44334239
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtatt 99  Q
    ||||||||||  ||||||| ||||||||||||||| ||||||||||||| |||| | |||||||    
T  44334176 tgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaatgtgtgtatt 44334239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 7740823 - 7740730
Alignment:
Q  40 tttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    |||||||||||||||| |  | |||||||| |||||| ||| | | |||| || ||||||||||| ||||| |||| ||||||||| |||||||    
T  7740823 tttgtgtggggtccacatagccacgtgtcatatttttatgtaggtgtcaatggatgtattgtcacataaggttgtcaatgtatcataactctat 7740730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 41608528 - 41608593
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||||||  | |||| |||||||||| ||||||||| ||| |||||||||| ||||    
T  41608528 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 34340071 - 34340133
Alignment:
Q  62 acgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcat 125  Q
    |||||||||||||||||||||  |||||  ||||||||  |||||||| |||||||||||||||    
T  34340071 acgtgtcagatttttgtgtggc-atcaacaggtgtattaccacctaagagtgtctatgtatcat 34340133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 750302 - 750243
Alignment:
Q  40 tttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattg 100  Q
    ||||||||||||||| || || |||||||||| |||||||||| | | |||||||||||||    
T  750302 tttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgt-aaagggtgtattg 750243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 37926470 - 37926542
Alignment:
Q  62 acgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctata 134  Q
    ||||||||||||||| ||||| | | ||| | ||||||| ||||||| | | |||||||||||| ||||||||    
T  37926470 acgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactctata 37926542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 48489394 - 48489346
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggat 84  Q
    |||| ||||| ||| |||||||||| || ||||||||||||||||||||    
T  48489394 tgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggat 48489346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 8e-36; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 480464 - 480548
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  480464 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 480548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 29239980 - 29239885
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  29239980 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactct 29239885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 41236441 - 41236347
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||    
T  41236441 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 48183055 - 48183150
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  48183055 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactct 48183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 50052434 - 50052529
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  50052434 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 50052529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 11511468 - 11511562
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  11511468 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 54473539 - 54473633
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||    
T  54473539 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 29234251 - 29234347
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||| ||||| |||||||||||||||||||||||||||||||||  | ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  29234251 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcattactcta 29234347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 3481748 - 3481654
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| | |||||| |||||||| ||||||| |||||||||||||||||||||    
T  3481748 tgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 6034138 - 6034044
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| ||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  6034138 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 23608329 - 23608234
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| |||||||| || |||||||||||||||||||||||||||||| | ||||| |||||||||||| |||||||||||||| ||||||||||||    
T  23608329 tgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactct 23608234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 42044373 - 42044468
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | |  |||| ||||||| ||||||||||||||||||||||||||||||    
T  42044373 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactct 42044468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 24995113 - 24995208
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| ||||||||||||||||||||||| |||||| ||||| | ||||||||||||||| || ||||||||||| || ||||||||||||    
T  24995113 tgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactct 24995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 50526192 - 50526271
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||| | |||||||||||||||||||    
T  50526192 tccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 31910286 - 31910192
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||| ||| ||| ||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||| ||||    
T  31910286 tgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 28480274 - 28480372
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctata 134  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||  | | ||   |||||||||||||||||| ||||||||||| || ||||||||    
T  28480274 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactctata 28480372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 28481149 - 28481247
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctata 134  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||  | | ||   |||||||||||||||||| ||||||||||| || ||||||||    
T  28481149 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactctata 28481247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 28482024 - 28482122
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctata 134  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||  | | ||   |||||||||||||||||| ||||||||||| || ||||||||    
T  28482024 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactctata 28482122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 29977979 - 29977884
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||| | | || |||||||||| |||||| || | | ||||||||||||||||    
T  29977979 tgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactct 29977884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 40574846 - 40574779
Alignment:
Q  63 cgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||||||||| | ||||||||||||||  ||||||||| |||||||||||||| ||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 47986273 - 47986206
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||||||||||||||||||| |||| || ||||||| ||||||||||||| |||||||||| ||||||    
T  47986273 tgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactcta 47986206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 55475256 - 55475190
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||| ||| |||||||||| |||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactct 55475190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 18924530 - 18924595
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||| | |||| ||||| ||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 53352577 - 53352660
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcat 125  Q
    ||||| ||||||||| | |||||||||||||||||||||| | | | ||||  ||||||| ||||||||||||||||||||||||    
T  53352577 ttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 19670751 - 19670817
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||  | |||| |||||||||| ||||||||||||| |||||||||| |||||    
T  19670751 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 19670817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 29535470 - 29535377
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||| |||||||| | | ||| || ||||||||||||||| |||  | ||||||||||||||||  |||||||||||||| ||||    
T  29535470 tgtgtttgtgtgggatccacgtggccatgtg-catatttttgtgtggataccaagagatgtattgtcacctaagattgtctatgtatcataactc 29535377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 44536760 - 44536847
Alignment:
Q  44 tgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    ||||||||| |  |||| || |||||||||||||||||||| |||| |||||||||| |||||||  |||| |||||||||| ||||||    
T  44536760 tgtggggtctatatgaccacatgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtttatgtatcataactcta 44536847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 50813927 - 50813995
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    |||||||||||||||||| | |||| |||||||||  |||||||| |||| |||||||||| |||||||    
T  50813927 tgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactctat 50813995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 47104638 - 47104543
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||||||| |    || |||||||| |||||||||||| | ||| || ||||||||||| |||||  ||||||| ||||||||||||    
T  47104638 tgtgtttgtgtggggtcaataaaaccacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactct 47104543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 29547994 - 29548060
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||| | |||| || ||||||| ||||||||| ||| |||||||||| |||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactct 29548060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 32767023 - 32766957
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||| ||| | |||| |||||||||| |||||||| |||| |||||||||| |||||    
T  32767023 tgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactct 32766957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 41823976 - 41823930
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtgg 82  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||    
T  41823976 tgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgg 41823930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 55079749 - 55079814
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||| ||| | ||||  ||||||||| ||||||||||||| |||||||||| ||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 17983778 - 17983825
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggt 112  Q
    |||||||||||||||||| | |||| |||||||||| |||||||||||    
T  17983778 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 48647732 - 48647827
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| || ||||||||||| |||||| |||||||| ||||| | | ||  |||||||||| |||||||| ||| ||||| |||| |||||    
T  48647732 tgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactct 48647827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 8343198 - 8343263
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||| ||| | | ||||||| ||||||| ||||||||| ||| |||||||||| ||||    
T  8343198 tgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 18769199 - 18769114
Alignment:
Q  40 tttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcat 125  Q
    ||||||||||||  || |||| ||||||||||||||||||||| | | | ||||||||| |  || ||||| ||| ||||||||||    
T  18769199 tttgtgtggggtttacatgaccacgtgtcagatttttgtgtgggtgttagagggtgtatgggtacataaggatgtttatgtatcat 18769114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 29589751 - 29589831
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtat 122  Q
    ||||||||||||||  || | || | |||||||||||||||| | |||| |||||||||| || |||||||||| |||||||    
T  29589751 ttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 7465741 - 7465837
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||||||    
T  7465741 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactcta 7465837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 32505654 - 32505750
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  32505654 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactcta 32505750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 10249388 - 10249483
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  10249388 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactct 10249483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 19930826 - 19930917
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatta 127  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  19930826 tgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 13438437 - 13438343
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  13438437 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 28863549 - 28863452
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  28863549 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattattctat 28863452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 9058574 - 9058479
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  9058574 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 9058479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 33436106 - 33436201
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33436106 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 33436201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 38882831 - 38882914
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  38882831 ggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactct 38882914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 4060764 - 4060685
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  4060764 tccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 27864787 - 27864704
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||    
T  27864787 ggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 17473114 - 17473020
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||||    
T  17473114 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 40701572 - 40701478
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||||||||    
T  40701572 tgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 5574494 - 5574590
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||| ||||| ||| |||||||||||||||||||||||||| ||||| | ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  5574494 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcta 5574590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 30915546 - 30915462
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||||||||||||||| |||||   ||||||||||||||| ||||||||||||||||||||||||||||||    
T  30915546 ggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 30915462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 28381661 - 28381755
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| || ||||| ||||||||||||||||||||||||||| | || || ||||||||| |||||||||||||||||||||||||||||    
T  28381661 tgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 20700898 - 20700814
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||||||||||||||||||| |   ||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  20700898 ggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactct 20700814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 40613908 - 40614002
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||| ||| | ||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  40613908 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 17820010 - 17820104
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||||||||||| || || |||||||||||||||||| | |||| |||||||||| ||||||  | |||||||||||||| ||||    
T  17820010 tgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 26891523 - 26891605
Alignment:
Q  49 ggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||| || |||||||||||||||||| | || | |||||||||| |||||||||||| ||||||||||| |||||    
T  26891523 ggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactct 26891605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 43490186 - 43490121
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||||| |||||||||| ||||    
T  43490186 tgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 2533217 - 2533122
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||| ||||| |||||| | ||| ||||||||||||||||||||||| | ||||||| ||||||| ||| ||||| |||||||||||||| ||||||    
T  2533217 tgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcataactcta 2533122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 38273159 - 38273243
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||| ||| ||||||||||||||||||||||| | | ||||||||||||| || |||||  |||||||||||||| |||||    
T  38273159 ggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactct 38273243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 33436279 - 33436208
Alignment:
Q  62 acgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    ||||||||||||||| ||||| | ||||| ||||||||| || |||||| ||||||||||||||||||||||    
T  33436279 acgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactctat 33436208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 41575220 - 41575138
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattact 129  Q
    ||||||||| |||| || ||||| ||||||||||| || ||||||||||||||  || |||||| ||||||||||||||||||    
T  41575220 ggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 38732443 - 38732354
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||| ||||||||  |||| || |||||||||||||||||| | |||| || ||||||||||| ||||||||| |||||||||| ||||    
T  38732443 ttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 36168925 - 36168834
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    ||||| |||||||| ||| | |||||||| ||||||||||||   | ||||| |||||||||| |||||| |||||||||||||| ||||||    
T  36168925 ttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactcta 36168834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 42257287 - 42257192
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||| ||| | ||||||||||||||| ||||| | ||||| | ||||||| ||||||| | |||||||||||||| |||||    
T  42257287 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactct 42257192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 3440073 - 3439985
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatca 124  Q
    |||| ||||| ||||||||||| |  || ||| |||||||||||||| | || | | |||||||| |||||||||||||||| ||||||    
T  3440073 tgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 2997522 - 2997569
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggt 112  Q
    |||||||||||||||||| | |||| |||||||||| |||||||||||    
T  2997522 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 45097770 - 45097836
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||| ||| | |||| || ||||||| ||||||||| ||| |||||||||| |||||    
T  45097770 tgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactct 45097836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 40145501 - 40145407
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||    
T  40145501 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 18520890 - 18520981
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatta 127  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  18520890 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 18520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 2740368 - 2740272
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  2740368 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactcta 2740272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 36732948 - 36733043
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||| | |||||||||||||||  |||||||||||||||||||||||||||||    
T  36732948 tgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactct 36733043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 13811746 - 13811651
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||| | ||||||| |||||||||||||||||||||| |||||||    
T  13811746 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatctttactct 13811651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 14831908 - 14831814
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| |||||||||||||||||||||||||| ||||| | ||||||||||||||| |||||||| ||||||||||||||||||||    
T  14831908 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 28177869 - 28177775
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  28177869 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 33149644 - 33149738
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| ||||||||||||||||||| |||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||    
T  33149644 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 35785293 - 35785199
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| ||||||| |||||||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||||||||    
T  35785293 tgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 42414308 - 42414402
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||  |||||||||||||||||||||    
T  42414308 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 35943898 - 35943992
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||| | ||||| | ||||||| |||||||||||||||||||||||| ||||    
T  35943898 tgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 6679792 - 6679696
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||||| | ||||| ||||||||| ||||||| | |||||||||||||| ||||||    
T  6679792 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactcta 6679696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 15409616 - 15409711
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| |||||||| ||| ||||||||||||||||||||||| | ||||||  ||||||||||||||||| |||||||||||||| |||||    
T  15409616 tgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactct 15409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 41470427 - 41470518
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactcta 132  Q
    ||||| |||||||||||||||||||||||||||||| | || || | ||||| ||||||| ||||||| ||||||||||||| |||||||||    
T  41470427 ttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactcta 41470518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 31009082 - 31008987
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||| | |  |||  ||||||||||||||||| ||| |||||||||| |||||    
T  31009082 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactct 31008987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 36875644 - 36875702
Alignment:
Q  71 atttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattact 129  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 3921300 - 3921366
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||| |||||    
T  3921300 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 3921366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 2252203 - 2252272
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctata 134  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||| ||| |||||||||| ||||||||    
T  2252203 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactctata 2252272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 6260015 - 6260101
Alignment:
Q  44 tgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| |||||| ||||| | |||| ||||||||| |||| | | |||||||||||||||||||| || ||| |||||||||||||||    
T  6260015 tgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 26720610 - 26720516
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| |||| ||| | ||||||||||||||| ||| | | | ||||||||||||| ||||||||| |||||||||||||| ||||    
T  26720610 tgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 26990359 - 26990265
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| |||| ||| | ||||||||||||||| ||| | | | ||||||||||||| ||||||||| |||||||||||||| ||||    
T  26990359 tgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 31132433 - 31132389
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggata 85  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  31132433 ttgtgcggggtccacgtgactacttgtcagatttttgtgtggata 31132389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 9603907 - 9603812
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| |||| |||||||||  |||| | ||||||||||||||||| | | | || | ||||||| |||||||||| ||| ||||||||||||||||    
T  9603907 tgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattactct 9603812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 38296297 - 38296202
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||| |||||| || |||||||  ||||||||| ||||||||||||| ||| ||  ||||||||| ||||||||   ||||||||||||| |||||    
T  38296297 tgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataactct 38296202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 33825356 - 33825424
Alignment:
Q  62 acgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||||||||||||| ||||| | |||| | |||||||| ||||||||  |||||||| ||||||||||    
T  33825356 acgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 39688934 - 39688998
Alignment:
Q  67 tcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||| | |||| || ||||||| ||| ||||||||| |||||||||| |||||    
T  39688934 tcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactct 39688998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  67 tcagatttttgtgtggatatcaaaggg-tgtattgtcacctaagggtgtctatgtatcat 125  Q
    |||||||||||||||| | |||| ||| ||||||| ||||||||| ||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 20073534 - 20073616
Alignment:
Q  48 gggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||   |||||  |||||||| ||||  | |||||||||||||||||| |||| | ||||||| |||||||||||    
T  20073534 gggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 21370098 - 21370052
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtgg 82  Q
    |||||||||| |||||||||||||| || ||||||||||||| ||||    
T  21370098 tgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgg 21370052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 16327995 - 16327902
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattact 129  Q
    |||| ||||||| ||| ||| |||  ||||||||||||||| ||||| | |||| || ||||||| ||||||||| | | ||| ||||||||||    
T  16327995 tgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 25831379 - 25831334
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtg 81  Q
    |||||||||||||||||||| |||| |||||| |||||||| ||||    
T  25831379 tgtgtttgtgtggggtccacatgaccacgtgttagatttttttgtg 25831334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 22512408 - 22512467
Alignment:
Q  40 tttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattg 100  Q
    ||||||||||||||| ||  | |||||||||| |||||||||||| | |||||||||||||    
T  22512408 tttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgt-aaagggtgtattg 22512467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 39557523 - 39557571
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggat 84  Q
    |||| |||| ||||||||| ||||  |||||||||||||||||||||||    
T  39557523 tgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggat 39557571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 32869772 - 32869678
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||| ||||||    
T  32869772 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 22880664 - 22880755
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatta 127  Q
    |||| ||||| ||||||||||||||||||||||||| |||||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  22880664 tgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 31109417 - 31109500
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||    
T  31109417 ggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 17598648 - 17598554
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||| | ||||| | ||||||| |||||||||||||||||||||||||||||    
T  17598648 tgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 11427712 - 11427613
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcaccta--agggtgtctatgtatcattactctat 133  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||||  ||||||||||||||||||||||||||    
T  11427712 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactctat 11427613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 6209482 - 6209566
Alignment:
Q  47 ggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||||| ||||||||||||||  | |||||  |||||||| ||||||||||||||||||||||||||||||    
T  6209482 ggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactct 6209566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 23128133 - 23128224
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatta 127  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| | ||||||| |||||| |||| ||| ||||||||| ||||||||    
T  23128133 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatta 23128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 15832656 - 15832576
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||||||||| |||||||||||| | ||||| | | ||||||||||||| ||||||||||||||||||||||    
T  15832656 tccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactct 15832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 31976342 - 31976245
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactctat 133  Q
    |||| ||||| ||||| || ||||| ||||||||||||||||||||| | | ||||||| ||||| ||||||||| |||||||||||||| |||||||    
T  31976342 tgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactctat 31976245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 29857906 - 29857827
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||||| |||||||||||||||||||||||| | | ||| ||||||||| || |||| |||||||||||||||||||||    
T  29857906 tccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 31953036 - 31953130
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||| ||||||| |||  || |||||||||||| ||||| | |||| |||||||||| ||||||||| ||||||| |||||||||||    
T  31953036 tgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 946452 - 946377
Alignment:
Q  54 acgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattact 129  Q
    ||||||||| |||||||||||||| || | | |||||||||||||| |||||||||| |||||||||||| |||||    
T  946452 acgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 28536494 - 28536582
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcatt 126  Q
    |||| ||||||||||||||| ||||  |||||||||||||||||||| | |||| || ||||||| ||||||||| ||| |||||||||||    
T  28536494 tgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 15990077 - 15990143
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||| |||||    
T  15990077 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 15990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 30341395 - 30341461
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||| |||||    
T  30341395 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 30341461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 15508059 - 15508124
Alignment:
Q  65 tgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||||||| | |||| |||||||||| ||||||||||||| |||||||||| ||||    
T  15508059 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 31110779 - 31110860
Alignment:
Q  48 gggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||| |||  ||||||||||||||||||| |  | ||||||||||||||| ||||||||| |||||||||||||| |||||    
T  31110779 gggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactct 31110860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 9379718 - 9379807
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcat 125  Q
    |||||||||||| | ||||| || | |||||||| |||||||| ||| | |||| || |||||||||| |||||| ||||||||||||||    
T  9379718 tgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 24203984 - 24203921
Alignment:
Q  40 tttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcac 104  Q
    ||||||||||||||| ||  | |||||||||| |||||||||||| | |||||||||||||||||    
T  24203984 tttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgt-aaagggtgtattgtcac 24203921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 4231637 - 4231548
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||| ||||||||  || | ||||||||||||||||||||| |  ||| |||||||||| ||||||| | ||| |||| ||||| ||||    
T  4231637 ttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 12732550 - 12732481
Alignment:
Q  62 acgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    ||||||||||||||||||||| | |||| |  | ||||| ||| ||||  ||||||||||||||||||||    
T  12732550 acgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactct 12732481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 22422084 - 22422121
Alignment:
Q  96 tattgtcacctaagggtgtctatgtatcattactctat 133  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  22422084 tattgccacctaaggatgtctatgtatcattactctat 22422121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 10128 - 10210
Alignment:
Q  49 ggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 131  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||| |||||||||||||||| |||||    
T  10128 ggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactct 10210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 935 - 1029
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| | |||||||||||||||||| ||||||||||||| | ||||||||||||| ||||||| | |||||||||||||||||||    
T  935 tgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 935 - 1029
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||| ||||| ||| | |||||||||||||||||| ||||||||||||| | ||||||||||||| ||||||| | |||||||||||||||||||    
T  935 tgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 8874 - 8963
Alignment:
Q  41 ttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    |||||||||||||||||||||| |||||| |||||||||| ||| |||||  |||||||||||| ||||| ||||||| |||||| ||||    
T  8874 ttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcataactc 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 4108 - 4029
Alignment:
Q  51 tccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 130  Q
    ||||||| |||||||||||||||||||||||| | | ||| ||||||||| || |||| |||||||||||||||||||||    
T  4108 tccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 152588 - 152514
Alignment:
Q  40 tttgtgtggggtccacgtgactacgtgtcagatttttgtgtggatatcaaagggtgtattgtcacctaagggtgt 114  Q
    |||||| ||| ||||  |||| || |||||||||||||||||| | |||| |||||||||| |||| ||||||||    
T  152588 tttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgt 152514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 17148 - 17100
Alignment:
Q  36 tgtgtttgtgtggggtccacgtgactacgtgtcagatttttgtgtggat 84  Q
    |||| ||||| |||||||| ||||| || ||||||||||||||||||||    
T  17148 tgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggat 17100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University