View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8230_low_1 (Length: 706)
Name: NF8230_low_1
Description: NF8230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8230_low_1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 499; Significance: 0; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 18 - 696
Target Start/End: Original strand, 13085498 - 13086162
Alignment:
| Q |
18 |
acaacttatgtttgttagcataaaccttattgcctcttttgaacacnnnnnnntgtatcgaaggctttaatagttaataacatgtgtgaaacaaaggctt |
117 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
13085498 |
acaatttatgtttgttagcataaacctcattgcctcttttgaacacaaaaaaatgtatcaaaggctt-aatagttaa---catgtgtgaaacaaaggctt |
13085593 |
T |
|
| Q |
118 |
aataactatagaaacatagagaatttgtaataaattgacaaagataaagaattcctaggaatttcttaataaagactagaataaattattatctaatata |
217 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
13085594 |
aataactatagaaatatagagaatttgtaataaattgacaaagataaagaattcctaggaatttcttaataaagactagaataaattat---ctaatata |
13085690 |
T |
|
| Q |
218 |
agatggaatacataaccctttttatatatccaaagtgtagttagatagagaattaaccgaaaataaaccaaattgaataccggtattatnnnnnnnccaa |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13085691 |
agatggaatacataaccctttttatatatccaaagtgtaggtagatagagaattaaccgaaaataaaccaaattgaataccggtattagaaaagaaccaa |
13085790 |
T |
|
| Q |
318 |
ggataacactaacttatcataaacattaaagatatccatctatttgaacatcattaaacacaaatggaaaataaaatgattgaacatatatcaataagca |
417 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13085791 |
ggataacactaacttatcataaacactaaagata-------aaatgaatatcattaaacacaaatggaaaataaaatgattgaacatatatcaatgagca |
13085883 |
T |
|
| Q |
418 |
ttcttaacttcacaaaactgataatgtttatatcaaattcatcttctactaactttgactttgaatccatgttccatgcggagaacaatagaaactcttg |
517 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13085884 |
ttcttaacttcaaaaaactgataatgtttatatcaaattcatcttttactaactttgactttgaatccatgttccatgcggagaacaatagaaactcttg |
13085983 |
T |
|
| Q |
518 |
gagttacagaatgaccttccacaacttgtatgtgaaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagaca |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13085984 |
gagttacagaatgaccttccacaacttgtatgtgaaacttccataacatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagaca |
13086083 |
T |
|
| Q |
618 |
acttcgaggacctgcattgaatgctatgaacttgtaagagggtacatgcataatatgtcctttatctgatgtccatctc |
696 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
13086084 |
acttcgaggacctgcattaaatgctatgaacttgcaagatggtacatgcaaaatatgtcctttatctgatatccatctc |
13086162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 499 - 696
Target Start/End: Original strand, 13271444 - 13271641
Alignment:
| Q |
499 |
agaacaatagaaactcttggagttacagaatgaccttccacaacttgtatgtgaaacttccataatatagcagctgcaaccattttcatttgaacaatgc |
598 |
Q |
| |
|
|||||||| ||||| || ||||| ||||| ||||||||||| || |||||||||||||||||||||| || ||||||||||||||||||||||| || || |
|
|
| T |
13271444 |
agaacaatcgaaaccctaggagtaacagactgaccttccaccacatgtatgtgaaacttccataatacagaagctgcaaccattttcatttgaataaagc |
13271543 |
T |
|
| Q |
599 |
taatatctttcccaagacaacttcgaggacctgcattgaatgctatgaacttgtaagagggtacatgcataatatgtcctttatctgatgtccatctc |
696 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||||| |
|
|
| T |
13271544 |
taatatctttcccaagacagcttctaggacctgcattgaatgctatgaacttgtaagatggtacatgtataatttgtcctttatctgatatccatctc |
13271641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 449 - 695
Target Start/End: Complemental strand, 12964259 - 12964013
Alignment:
| Q |
449 |
atcaaattcatcttctactaactttgactttgaatccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaacttgtat |
548 |
Q |
| |
|
||||||| |||||| ||| |||||||| || || ||||||| ||| || ||||| |||| ||| |||||||| ||| | ||||||||||| |||| ||| |
|
|
| T |
12964259 |
atcaaatgcatctttgactgactttgaccttcaaaccatgtttcatacgaagaaccatagcaacccttggagtaacaaagtgaccttccaccacttctat |
12964160 |
T |
|
| Q |
549 |
gtgaaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattgaatgctatgaac |
648 |
Q |
| |
|
|||||||||||| || | | ||| |||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
12964159 |
gtgaaacttccacaacacattagcagcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaatgctatgaac |
12964060 |
T |
|
| Q |
649 |
ttgtaagagggtacatgcataatatgtcctttatctgatgtccatct |
695 |
Q |
| |
|
|| ||||| || || || ||||| | |||| ||| |||| ||||||| |
|
|
| T |
12964059 |
ttataagatggcacttgtataatttctcctctatttgatatccatct |
12964013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 416 - 696
Target Start/End: Complemental strand, 13081282 - 13081002
Alignment:
| Q |
416 |
cattcttaacttcacaaaactgataatgtttatatcaaattcatcttctactaactttgactttgaatccatgttccatgcggagaacaatagaaactct |
515 |
Q |
| |
|
|||||| ||||| | |||||| ||||| ||||||||||| |||||| ||| || |||||| || || |||||||||||||| || | ||||||||| || |
|
|
| T |
13081282 |
cattctgaactttataaaacttgtaatgcttatatcaaatgcatcttttacgaattttgaccttaaagccatgttccatgcgaaggagaatagaaaccct |
13081183 |
T |
|
| Q |
516 |
tggagttacagaatgaccttccacaacttgtatgtgaaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaaga |
615 |
Q |
| |
|
||| ||| || ||||||||||| || || ||||||||||| |||| | ||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
13081182 |
aggaattattgagtgaccttccaccacctgaatgtgaaacttaaataaaactgcagctgcaaccattttcatttgaagaaaactaatatctttcccaaga |
13081083 |
T |
|
| Q |
616 |
caacttcgaggacctgcattgaatgctatgaacttgtaagagggtacatgcataatatgtcctttatctgatgtccatctc |
696 |
Q |
| |
|
|| |||| ||||||||||| || ||||||||||| ||||| || || || ||||| |||||| |||||||| |||||||| |
|
|
| T |
13081082 |
cagcttcttggacctgcattaaacgctatgaacttataagacggcacttgtataatttgtcctctatctgatatccatctc |
13081002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 445 - 664
Target Start/End: Complemental strand, 13244909 - 13244690
Alignment:
| Q |
445 |
ttatatcaaattcatcttctactaactttgactttgaatccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaactt |
544 |
Q |
| |
|
||||||||||| |||||| |||| |||| ||| || || || |||| |||||| | ||||||||| ||| | ||||||| ||||||||||| || | |
|
|
| T |
13244909 |
ttatatcaaatgcatcttttactgacttcgacctttaagccgtgtttcatgcgaacgacaatagaagttctcagcgttacagggtgaccttccaccacct |
13244810 |
T |
|
| Q |
545 |
gtatgtgaaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattgaatgctat |
644 |
Q |
| |
|
||||| ||||||||||||| | || |||||||||||||||||||||||| | ||||| ||||||||||| |||||||| ||||||||||||||| ||||| |
|
|
| T |
13244809 |
gtatgcgaaacttccataacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaaagctat |
13244710 |
T |
|
| Q |
645 |
gaacttgtaagagggtacat |
664 |
Q |
| |
|
|||||||||||| ||||||| |
|
|
| T |
13244709 |
gaacttgtaagacggtacat |
13244690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 529 - 696
Target Start/End: Complemental strand, 19279472 - 19279305
Alignment:
| Q |
529 |
tgaccttccacaacttgtatgtgaaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggac |
628 |
Q |
| |
|
||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||| || ||||| |||| |||| |
|
|
| T |
19279472 |
tgaccttccacgacctgtatgcgaaacttccataatacagcagctgcaaccattttcatttgaaggaaagtaatatcttttccgagacagcttctcggac |
19279373 |
T |
|
| Q |
629 |
ctgcattgaatgctatgaacttgtaagagggtacatgcataatatgtcctttatctgatgtccatctc |
696 |
Q |
| |
|
||||||| || |||||||||||||| || |||||||| ||||| |||||| |||| ||| |||||||| |
|
|
| T |
19279372 |
ctgcattaaacgctatgaacttgtacgatggtacatgtataatttgtcctctatccgatatccatctc |
19279305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 450 - 696
Target Start/End: Complemental strand, 30368491 - 30368245
Alignment:
| Q |
450 |
tcaaattcatcttctactaactttgactttgaatccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaacttgtatg |
549 |
Q |
| |
|
|||||| |||||| || |||| ||||| || || ||||||| ||| | || |||| |||| | || || ||||||| ||||||||||| || |||||| |
|
|
| T |
30368491 |
tcaaatgcatcttttagtaaccttgacgttcaagccatgtttcattcaaaggacaacagaagccctaggggttacagggtgaccttccacgacctgtatg |
30368392 |
T |
|
| Q |
550 |
tgaaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattgaatgctatgaact |
649 |
Q |
| |
|
|||||||||||||| | |||||||||||||| ||||||||||| | |||| |||||| || | |||||||| ||| |||| |||||| |||||||||| |
|
|
| T |
30368391 |
tgaaacttccataacaaggcagctgcaaccatcttcatttgaacgaaactaagatctttacccatacaacttctaggtcctgtattgaaagctatgaact |
30368292 |
T |
|
| Q |
650 |
tgtaagagggtacatgcataatatgtcctttatctgatgtccatctc |
696 |
Q |
| |
|
||||||| |||||||| ||||| |||||| | |||||| ||||||| |
|
|
| T |
30368291 |
tgtaagatggtacatgtataatgtgtcctctctctgatacccatctc |
30368245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 450 - 696
Target Start/End: Complemental strand, 13070559 - 13070313
Alignment:
| Q |
450 |
tcaaattcatcttctactaactttgactttgaatccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaacttgtatg |
549 |
Q |
| |
|
|||||| |||||| || | ||||| || ||||| ||||||| |||| | ||||||| |||| |||| ||||||| ||||||||||| || |||||| |
|
|
| T |
13070559 |
tcaaatgcatcttttagtgactttaaccttgaagccatgtttcatgtgaagaacaaatgaaagctttggggttacagggtgaccttccaccacctgtatg |
13070460 |
T |
|
| Q |
550 |
tgaaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattgaatgctatgaact |
649 |
Q |
| |
|
||||||||| ||| | ||||||||| ||||| |||||||||| | |||| |||||| || | |||||||| ||||||| |||||| |||||||||| |
|
|
| T |
13070459 |
tgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaaacaacttctcggacctgtattgaaagctatgaact |
13070360 |
T |
|
| Q |
650 |
tgtaagagggtacatgcataatatgtcctttatctgatgtccatctc |
696 |
Q |
| |
|
||||||| || ||||| ||||| |||||| | |||||| ||||||| |
|
|
| T |
13070359 |
tgtaagatggaacatgtataatgtgtcctgtctctgatacccatctc |
13070313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 446 - 677
Target Start/End: Complemental strand, 13065600 - 13065369
Alignment:
| Q |
446 |
tatatcaaattcatcttctactaactttgactttgaatccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaacttg |
545 |
Q |
| |
|
|||||||||| |||||| || | ||| |||| || || ||||||| ||| | ||| |||||||| ||||||||||||| |||||| ||||| | || |
|
|
| T |
13065600 |
tatatcaaatgcatcttttagtgactatgaccttcaagccatgtttcattccgagggtaatagaaagccttggagttacaggatgaccatccactaaatg |
13065501 |
T |
|
| Q |
546 |
tatgtgaaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattgaatgctatg |
645 |
Q |
| |
|
|||| ||||||||||| |||||| || ||| |||| ||||||| ||| | | | |||||||| || | |||||||| || ||||||||||| |||||| |
|
|
| T |
13065500 |
tatgcaaaacttccatagtatagccgcggcagccatcttcatttcaacgaaggtgatatctttacccaaacaacttcttggccctgcattgaaagctatg |
13065401 |
T |
|
| Q |
646 |
aacttgtaagagggtacatgcataatatgtcc |
677 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |
|
|
| T |
13065400 |
aacttgtaagacggtacatgtataatttgtcc |
13065369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 452 - 678
Target Start/End: Original strand, 13100812 - 13101037
Alignment:
| Q |
452 |
aaattcatcttctactaactttgactttgaatccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaacttgtatgtg |
551 |
Q |
| |
|
|||| |||||| || | |||||||| || || ||||||| |||| | ||||||| ||||| | || |||| || ||||||||||| || |||||||| |
|
|
| T |
13100812 |
aaatgcatcttttagtgactttgaccttcaagccatgtttcatgtgaagaacaaaagaaagcttcggggttatagggtgaccttccaccacctgtatgtg |
13100911 |
T |
|
| Q |
552 |
aaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattgaatgctatgaacttg |
651 |
Q |
| |
|
||||||| ||| | ||||||||| ||||| |||||||||| | ||||||||| || || | |||||||| ||| |||| |||||| |||||||||||| |
|
|
| T |
13100912 |
aaacttcggtaacaaagcagctgcgaccatcttcatttgaatgaagctaatatccttacccatacaacttctaggtcctg-attgaaagctatgaacttg |
13101010 |
T |
|
| Q |
652 |
taagagggtacatgcataatatgtcct |
678 |
Q |
| |
|
||||| |||||||| ||||| |||||| |
|
|
| T |
13101011 |
taagatggtacatgtataatgtgtcct |
13101037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 484 - 673
Target Start/End: Original strand, 13094242 - 13094431
Alignment:
| Q |
484 |
ccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaacttgtatgtgaaacttccataatatagcagctgcaaccattt |
583 |
Q |
| |
|
||||||| |||||| |||| | ||||| ||||| ||||||| ||||||||||| || |||||||||||||||| ||| | ||||||||| ||||| | |
|
|
| T |
13094242 |
ccatgtttcatgcgaagaaacacagaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatct |
13094341 |
T |
|
| Q |
584 |
tcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattgaatgctatgaacttgtaagagggtacatgcataatat |
673 |
Q |
| |
|
||||||||| | ||||||||||| || | |||| ||| || |||| ||||| ||||||||||||||||| |||||||| ||||||| |
|
|
| T |
13094342 |
tcatttgaatgaaactaatatctttacctatacaaattctgggtcctgtgttgaaagctatgaacttgtaagatggtacatgtataatat |
13094431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 450 - 696
Target Start/End: Original strand, 13204268 - 13204514
Alignment:
| Q |
450 |
tcaaattcatcttctactaactttgactttgaatccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaacttgtatg |
549 |
Q |
| |
|
|||||| |||||| || | ||||| || || || |||| || |||| | ||||||| ||||| |||| ||||||| ||||||||||| | | |||| |
|
|
| T |
13204268 |
tcaaatgcatcttttagtgactttaacctttaaaccatatttcatgtgaagaacaaaagaaatctttggggttacagggtgaccttccactatctttatg |
13204367 |
T |
|
| Q |
550 |
tgaaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattgaatgctatgaact |
649 |
Q |
| |
|
||||| ||| ||| | ||||||||| ||||| |||||||||| | |||| |||||| || | |||||||| |||||||| |||||| |||||||||| |
|
|
| T |
13204368 |
tgaaaattctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaaacaacttctaggacctgtattgaaagctatgaact |
13204467 |
T |
|
| Q |
650 |
tgtaagagggtacatgcataatatgtcctttatctgatgtccatctc |
696 |
Q |
| |
|
||||||| |||||||| ||||| |||||| | |||||| ||||||| |
|
|
| T |
13204468 |
tgtaagatggtacatgtataatgtgtcctgtctctgatacccatctc |
13204514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 678
Target Start/End: Original strand, 13007088 - 13007237
Alignment:
| Q |
529 |
tgaccttccacaacttgtatgtgaaacttccataatatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggac |
628 |
Q |
| |
|
|||||| |||| || | |||||||||||| ||| | ||| ||||| ||||| |||||||||| | ||||||||| || || | |||||||| ||||| |
|
|
| T |
13007088 |
tgacctgccaccacctttatgtgaaactttggtaacaaagctgctgcgaccatcttcatttgaatgaagctaatatccttgcccatacaacttctaggac |
13007187 |
T |
|
| Q |
629 |
ctgcattgaatgctatgaacttgtaagagggtacatgcataatatgtcct |
678 |
Q |
| |
|
||| |||||| ||||||||||||||||| |||||||| ||||| |||||| |
|
|
| T |
13007188 |
ctgtattgaaagctatgaacttgtaagatggtacatgtataatgtgtcct |
13007237 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 673
Target Start/End: Original strand, 13129671 - 13129860
Alignment:
| Q |
484 |
ccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaacttgtatgtgaaacttccataatatagcagctgcaaccattt |
583 |
Q |
| |
|
||||||| |||||| |||| | ||||| ||||| ||||||| ||||||||||| || ||||||||||||||| ||| | ||||||||| ||||| | |
|
|
| T |
13129671 |
ccatgtttcatgcgaagaagcacagaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatct |
13129770 |
T |
|
| Q |
584 |
tcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattgaatgctatgaacttgtaagagggtacatgcataatat |
673 |
Q |
| |
|
||||||||| | |||| |||||| || | |||| ||| || |||| ||||| |||| |||||||||||| |||||||| ||||||| |
|
|
| T |
13129771 |
tcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagctacgaacttgtaagatggtacatgtataatat |
13129860 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 673
Target Start/End: Original strand, 13161364 - 13161553
Alignment:
| Q |
484 |
ccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaacttgtatgtgaaacttccataatatagcagctgcaaccattt |
583 |
Q |
| |
|
||||||| |||||| |||| | ||||| ||||| |||||| ||||||||||| || |||||||||||||||| ||| | ||||||||| ||||| | |
|
|
| T |
13161364 |
ccatgtttcatgcgaagaaacacagaaagccttggggttacaaggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatct |
13161463 |
T |
|
| Q |
584 |
tcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattgaatgctatgaacttgtaagagggtacatgcataatat |
673 |
Q |
| |
|
||||||||| | |||| |||||| || | |||| ||| || |||| ||||| | ||||||||||||||| |||||||| ||||||| |
|
|
| T |
13161464 |
tcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagatatgaacttgtaagaaggtacatgtataatat |
13161553 |
T |
|
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Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 484 - 588
Target Start/End: Original strand, 13010616 - 13010720
Alignment:
| Q |
484 |
ccatgttccatgcggagaacaatagaaactcttggagttacagaatgaccttccacaacttgtatgtgaaacttccataatatagcagctgcaaccattt |
583 |
Q |
| |
|
||||||| ||||| |||| |||||||| | |||| |||| | |||||||||||| ||||||||| |||| |||||||| | | ||||||| ||||| | |
|
|
| T |
13010616 |
ccatgttttatgcgaagaataatagaaagttttggggttatggcatgaccttccaccacttgtatgcgaaatttccataacaaatcagctgcgaccatct |
13010715 |
T |
|
| Q |
584 |
tcatt |
588 |
Q |
| |
|
||||| |
|
|
| T |
13010716 |
tcatt |
13010720 |
T |
|
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