View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8230_low_16 (Length: 238)
Name: NF8230_low_16
Description: NF8230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8230_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 19086188 - 19085991
Alignment:
| Q |
20 |
tttatagttgaggagggaattcagtttgtgtcgagtatatgtaatatcaggaagctttcgagcttttgatagacgtccattagagagagaaagagttgat |
119 |
Q |
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| T |
19086188 |
tttatagttgaggagagaattcagtttgtgtcgaatatatgtaatatcaggaagctttcgagcttttgatagacgtccattagagagagaaagagttgat |
19086089 |
T |
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| Q |
120 |
caattaccggttaatgagattgatcaaaatccatttggtgccacatctactcatcagaatgcaacaagttcatttgaaatttctcaattaggaggact |
217 |
Q |
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| T |
19086088 |
caattaccggttaatgagattgatcaaaatccatttggtgccacatctactcatcaaaatgcaacaagttcatttgaaatttctcaattagggggact |
19085991 |
T |
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