View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8230_low_6 (Length: 403)

Name: NF8230_low_6
Description: NF8230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8230_low_6
NF8230_low_6
[»] chr1 (61 HSPs)
chr1 (1-397)||(26494384-26494786)
chr1 (157-397)||(29437019-29437255)
chr1 (62-397)||(42570671-42571011)
chr1 (69-325)||(35525150-35525409)
chr1 (158-397)||(41803312-41803549)
chr1 (62-397)||(36910867-36911205)
chr1 (155-324)||(24363021-24363190)
chr1 (155-311)||(49397729-49397885)
chr1 (155-397)||(13974009-13974250)
chr1 (155-325)||(18974394-18974564)
chr1 (62-397)||(49428325-49428662)
chr1 (69-325)||(46142408-46142667)
chr1 (62-325)||(48227497-48227764)
chr1 (69-397)||(6436706-6437047)
chr1 (155-310)||(13634387-13634542)
chr1 (163-325)||(49925402-49925564)
chr1 (158-311)||(27485690-27485842)
chr1 (185-397)||(51270916-51271126)
chr1 (155-320)||(23343597-23343765)
chr1 (185-310)||(29761148-29761273)
chr1 (155-323)||(35585861-35586032)
chr1 (236-325)||(14172713-14172802)
chr1 (155-323)||(15355743-15355914)
chr1 (237-325)||(26634161-26634249)
chr1 (192-315)||(37779266-37779389)
chr1 (155-323)||(38044163-38044334)
chr1 (23-134)||(24363219-24363330)
chr1 (157-323)||(39856202-39856371)
chr1 (222-325)||(44336871-44336974)
chr1 (155-287)||(13284540-13284675)
chr1 (155-315)||(17685296-17685459)
chr1 (155-323)||(35186081-35186252)
chr1 (155-323)||(49260638-49260809)
chr1 (155-320)||(16531152-16531320)
chr1 (62-128)||(27485876-27485942)
chr1 (62-128)||(29761323-29761389)
chr1 (198-316)||(40532343-40532461)
chr1 (62-128)||(51270799-51270865)
chr1 (198-320)||(12790235-12790354)
chr1 (62-133)||(41803210-41803281)
chr1 (69-127)||(14172912-14172970)
chr1 (69-134)||(18974303-18974368)
chr1 (155-323)||(24269327-24269497)
chr1 (69-134)||(13973918-13973983)
chr1 (155-291)||(14771762-14771901)
chr1 (1-61)||(24363319-24363379)
chr1 (69-132)||(22528470-22528533)
chr1 (192-281)||(31451454-31451543)
chr1 (86-134)||(29436944-29436992)
chr1 (69-128)||(49397638-49397696)
chr1 (339-397)||(13284687-13284745)
chr1 (339-397)||(18974591-18974649)
chr1 (339-397)||(49397911-49397969)
chr1 (64-128)||(35185989-35186053)
chr1 (32-128)||(39856389-39856493)
chr1 (62-101)||(49925582-49925621)
chr1 (80-138)||(13634563-13634621)
chr1 (62-128)||(38044350-38044416)
chr1 (12-61)||(13284410-13284459)
chr1 (158-190)||(19261596-19261628)
chr1 (63-99)||(35185961-35185997)
[»] chr5 (46 HSPs)
chr5 (1-325)||(35927037-35927363)
chr5 (62-325)||(34682884-34683151)
chr5 (69-397)||(25499073-25499403)
chr5 (62-397)||(3602329-3602663)
chr5 (155-397)||(18309342-18309583)
chr5 (157-325)||(35566355-35566523)
chr5 (155-325)||(11347763-11347933)
chr5 (155-310)||(11028410-11028565)
chr5 (155-325)||(1399258-1399428)
chr5 (163-325)||(8538947-8539109)
chr5 (155-325)||(8575218-8575388)
chr5 (155-325)||(19035752-19035922)
chr5 (155-325)||(38855117-38855287)
chr5 (155-325)||(6307-6477)
chr5 (184-311)||(20199451-20199578)
chr5 (155-325)||(27660454-27660624)
chr5 (155-325)||(30710562-30710732)
chr5 (155-323)||(7484451-7484622)
chr5 (205-323)||(1972510-1972628)
chr5 (192-323)||(6792405-6792536)
chr5 (198-323)||(1695934-1696059)
chr5 (62-134)||(20197062-20197134)
chr5 (198-320)||(36349265-36349386)
chr5 (155-291)||(7400791-7400930)
chr5 (62-134)||(8538842-8538914)
chr5 (62-134)||(11347666-11347738)
chr5 (236-315)||(4723057-4723136)
chr5 (69-134)||(35566263-35566328)
chr5 (77-127)||(1399460-1399510)
chr5 (80-134)||(11028331-11028385)
chr5 (80-138)||(19035943-19036001)
chr5 (80-134)||(28881876-28881930)
chr5 (155-188)||(20197159-20197192)
chr5 (64-128)||(1972377-1972441)
chr5 (207-291)||(31239140-31239224)
chr5 (339-397)||(541465-541523)
chr5 (80-138)||(8575409-8575467)
chr5 (80-134)||(27660649-27660703)
chr5 (80-134)||(30710483-30710537)
chr5 (339-397)||(34682804-34682862)
chr5 (80-134)||(38855038-38855092)
chr5 (339-397)||(41202287-41202345)
chr5 (62-99)||(1972348-1972385)
chr5 (62-99)||(6792661-6792698)
chr5 (155-291)||(8531273-8531412)
chr5 (64-128)||(6792605-6792669)
[»] chr4 (61 HSPs)
chr4 (69-397)||(34152171-34152500)
chr4 (69-397)||(6281407-6281739)
chr4 (69-395)||(44559214-44559541)
chr4 (62-325)||(956408-956675)
chr4 (158-325)||(56139979-56140146)
chr4 (69-323)||(51427157-51427415)
chr4 (69-325)||(49572093-49572353)
chr4 (155-325)||(6176391-6176561)
chr4 (155-325)||(21016253-21016423)
chr4 (155-325)||(49095706-49095876)
chr4 (155-325)||(40352852-40353022)
chr4 (155-325)||(41793878-41794048)
chr4 (155-325)||(49422712-49422878)
chr4 (158-325)||(37867536-37867703)
chr4 (155-325)||(55797704-55797874)
chr4 (158-311)||(9490551-9490704)
chr4 (155-397)||(42887365-42887608)
chr4 (185-325)||(34528774-34528914)
chr4 (185-325)||(1043836-1043976)
chr4 (185-397)||(39589872-39590082)
chr4 (155-320)||(21410938-21411106)
chr4 (192-321)||(4784301-4784430)
chr4 (155-320)||(21412340-21412508)
chr4 (155-323)||(36775441-36775612)
chr4 (155-323)||(21170559-21170730)
chr4 (155-323)||(51026747-51026918)
chr4 (155-320)||(2774100-2774267)
chr4 (1-128)||(9718159-9718294)
chr4 (155-323)||(25145612-25145783)
chr4 (198-310)||(49816385-49816497)
chr4 (157-323)||(49790888-49791057)
chr4 (62-128)||(9490451-9490517)
chr4 (158-323)||(9718340-9718507)
chr4 (62-134)||(49422905-49422977)
chr4 (62-128)||(1043718-1043784)
chr4 (62-128)||(56139879-56139945)
chr4 (155-323)||(45940621-45940792)
chr4 (192-291)||(4910624-4910723)
chr4 (62-128)||(34528964-34529030)
chr4 (62-128)||(39589756-39589822)
chr4 (198-312)||(43888460-43888574)
chr4 (69-128)||(37867443-37867502)
chr4 (155-292)||(24076205-24076345)
chr4 (59-128)||(21411152-21411221)
chr4 (59-128)||(21412224-21412293)
chr4 (80-134)||(55797625-55797679)
chr4 (236-323)||(17292831-17292918)
chr4 (62-129)||(49816577-49816644)
chr4 (339-397)||(37959182-37959240)
chr4 (80-138)||(41794069-41794127)
chr4 (62-99)||(21170437-21170474)
chr4 (1-61)||(21412185-21412245)
chr4 (339-397)||(51427086-51427142)
chr4 (339-397)||(4784220-4784278)
chr4 (80-138)||(6176582-6176640)
chr4 (80-138)||(21016444-21016502)
chr4 (339-397)||(34528704-34528762)
chr4 (80-138)||(40353040-40353098)
chr4 (80-134)||(49095627-49095681)
chr4 (62-99)||(36775702-36775739)
chr4 (1-61)||(21411200-21411260)
[»] chr7 (51 HSPs)
chr7 (62-395)||(48271637-48271972)
chr7 (69-397)||(46861079-46861410)
chr7 (155-397)||(41623164-41623404)
chr7 (155-311)||(42683486-42683642)
chr7 (155-325)||(17840282-17840452)
chr7 (69-309)||(36392793-36393036)
chr7 (155-325)||(9366193-9366363)
chr7 (62-325)||(28978189-28978455)
chr7 (155-325)||(34157763-34157930)
chr7 (158-397)||(34141937-34142174)
chr7 (157-325)||(21186250-21186418)
chr7 (155-325)||(20565722-20565892)
chr7 (185-325)||(40589850-40589990)
chr7 (155-325)||(42504331-42504501)
chr7 (155-325)||(10225153-10225323)
chr7 (155-397)||(28113289-28113529)
chr7 (185-325)||(48194078-48194218)
chr7 (185-325)||(45362249-45362389)
chr7 (155-323)||(4230553-4230724)
chr7 (155-320)||(1641643-1641811)
chr7 (155-323)||(15900364-15900529)
chr7 (155-315)||(43350358-43350521)
chr7 (155-315)||(22291926-22292089)
chr7 (155-320)||(42736071-42736238)
chr7 (198-298)||(20877007-20877107)
chr7 (62-128)||(41623067-41623133)
chr7 (62-128)||(42683389-42683455)
chr7 (62-128)||(48193962-48194028)
chr7 (69-138)||(21186441-21186510)
chr7 (69-128)||(30353998-30354057)
chr7 (62-125)||(34141837-34141900)
chr7 (69-128)||(40589515-40589574)
chr7 (155-323)||(17184280-17184450)
chr7 (1-61)||(1641900-1641960)
chr7 (239-309)||(3380031-3380101)
chr7 (80-134)||(17840203-17840257)
chr7 (80-134)||(34157684-34157738)
chr7 (62-128)||(45362439-45362505)
chr7 (341-397)||(21186173-21186229)
chr7 (62-128)||(4230445-4230511)
chr7 (80-134)||(13921199-13921253)
chr7 (80-134)||(20565643-20565697)
chr7 (339-397)||(36392699-36392757)
chr7 (342-397)||(48194233-48194288)
chr7 (80-138)||(9366384-9366442)
chr7 (339-397)||(28978119-28978177)
chr7 (59-128)||(1641852-1641921)
chr7 (62-99)||(42735950-42735987)
chr7 (341-397)||(10225340-10225396)
chr7 (64-128)||(20877187-20877251)
chr7 (158-190)||(40589609-40589641)
[»] chr8 (33 HSPs)
chr8 (155-325)||(28167876-28168046)
chr8 (62-397)||(18439185-18439522)
chr8 (155-325)||(484330-484500)
chr8 (62-325)||(41855954-41856221)
chr8 (158-325)||(41276151-41276318)
chr8 (158-325)||(24862422-24862589)
chr8 (155-322)||(42604524-42604691)
chr8 (158-325)||(15031397-15031564)
chr8 (155-325)||(41016926-41017096)
chr8 (155-325)||(45065750-45065920)
chr8 (157-324)||(40703436-40703603)
chr8 (185-325)||(44051535-44051675)
chr8 (195-292)||(22550179-22550276)
chr8 (155-323)||(26487536-26487707)
chr8 (192-323)||(38032863-38032994)
chr8 (62-128)||(22550053-22550119)
chr8 (62-128)||(41276046-41276112)
chr8 (155-315)||(42167903-42168066)
chr8 (62-128)||(40703337-40703403)
chr8 (62-128)||(24862322-24862388)
chr8 (62-128)||(44051419-44051485)
chr8 (339-397)||(28168068-28168126)
chr8 (80-134)||(41017121-41017175)
chr8 (62-120)||(42604427-42604485)
chr8 (198-291)||(19241648-19241741)
chr8 (198-291)||(19314832-19314925)
chr8 (342-397)||(38872415-38872470)
chr8 (80-138)||(15031588-15031646)
chr8 (80-138)||(484522-484580)
chr8 (80-134)||(45065671-45065725)
chr8 (62-99)||(42168152-42168189)
chr8 (64-128)||(26487456-26487520)
chr8 (64-128)||(38033052-38033116)
[»] chr2 (40 HSPs)
chr2 (62-397)||(16582791-16583130)
chr2 (155-397)||(19470507-19470747)
chr2 (155-325)||(2918320-2918490)
chr2 (62-325)||(23408702-23408969)
chr2 (155-397)||(23408799-23409040)
chr2 (155-397)||(35492611-35492854)
chr2 (62-325)||(43492441-43492708)
chr2 (62-397)||(40676300-40676641)
chr2 (155-397)||(41498004-41498244)
chr2 (74-325)||(41498074-41498329)
chr2 (155-325)||(43983690-43983860)
chr2 (155-325)||(3936377-3936547)
chr2 (157-325)||(22002792-22002960)
chr2 (155-325)||(28476470-28476640)
chr2 (155-325)||(17425754-17425924)
chr2 (155-315)||(33404831-33404994)
chr2 (155-325)||(39798941-39799111)
chr2 (155-323)||(6977912-6978083)
chr2 (197-325)||(3942507-3942635)
chr2 (192-323)||(34520674-34520805)
chr2 (157-323)||(15890930-15891098)
chr2 (205-320)||(37311602-37311717)
chr2 (155-323)||(5421218-5421389)
chr2 (192-310)||(16413245-16413362)
chr2 (192-320)||(17537870-17537998)
chr2 (62-120)||(2918530-2918588)
chr2 (159-312)||(24107738-24107894)
chr2 (62-127)||(19470779-19470844)
chr2 (262-325)||(23786743-23786806)
chr2 (62-128)||(3942383-3942445)
chr2 (69-105)||(35492563-35492599)
chr2 (80-134)||(17425675-17425729)
chr2 (80-134)||(28476391-28476445)
chr2 (80-134)||(29073939-29073993)
chr2 (80-134)||(43983611-43983665)
chr2 (62-99)||(17538126-17538163)
chr2 (62-99)||(24107980-24108017)
chr2 (339-396)||(43492720-43492777)
chr2 (64-128)||(17538070-17538134)
chr2 (64-128)||(24107924-24107988)
[»] chr3 (74 HSPs)
chr3 (62-397)||(13894791-13895125)
chr3 (62-325)||(2429463-2429730)
chr3 (155-325)||(45099425-45099595)
chr3 (62-325)||(41578904-41579171)
chr3 (159-397)||(43570962-43571199)
chr3 (62-397)||(7247037-7247376)
chr3 (62-325)||(43570861-43571128)
chr3 (155-397)||(46345490-46345731)
chr3 (157-325)||(52568395-52568563)
chr3 (155-325)||(4003228-4003398)
chr3 (155-325)||(54391417-54391587)
chr3 (155-325)||(55268035-55268205)
chr3 (155-325)||(2267559-2267729)
chr3 (155-325)||(34050702-34050872)
chr3 (155-325)||(36135990-36136159)
chr3 (155-325)||(46405980-46406150)
chr3 (155-325)||(49139128-49139298)
chr3 (158-325)||(34692258-34692425)
chr3 (158-325)||(51694510-51694677)
chr3 (155-325)||(2645950-2646120)
chr3 (155-309)||(55205913-55206066)
chr3 (158-324)||(49217704-49217871)
chr3 (155-397)||(34646107-34646344)
chr3 (155-325)||(3494098-3494268)
chr3 (155-320)||(20374938-20375105)
chr3 (186-310)||(43478134-43478258)
chr3 (197-311)||(49611272-49611386)
chr3 (155-323)||(11377939-11378110)
chr3 (155-323)||(51012244-51012415)
chr3 (192-323)||(49274547-49274678)
chr3 (155-312)||(27188161-27188321)
chr3 (155-323)||(34471019-34471190)
chr3 (155-315)||(50458216-50458379)
chr3 (155-320)||(44928548-44928716)
chr3 (155-311)||(27096660-27096820)
chr3 (205-323)||(14632608-14632726)
chr3 (62-128)||(24701454-24701520)
chr3 (69-134)||(45099621-45099686)
chr3 (62-127)||(49611144-49611209)
chr3 (69-128)||(43478023-43478082)
chr3 (69-127)||(52568598-52568656)
chr3 (155-323)||(51016376-51016547)
chr3 (69-128)||(49217905-49217964)
chr3 (62-117)||(51695126-51695181)
chr3 (62-128)||(34692459-34692525)
chr3 (62-128)||(55206097-55206163)
chr3 (155-323)||(10052315-10052485)
chr3 (62-138)||(46345754-46345830)
chr3 (231-325)||(3497792-3497886)
chr3 (166-220)||(24701353-24701407)
chr3 (62-128)||(30193531-30193597)
chr3 (80-134)||(36135911-36135965)
chr3 (59-128)||(20375139-20375208)
chr3 (63-128)||(55268234-55268299)
chr3 (80-128)||(4003429-4003477)
chr3 (1-61)||(20375187-20375247)
chr3 (80-138)||(2267750-2267808)
chr3 (80-138)||(3494289-3494347)
chr3 (155-291)||(50341432-50341571)
chr3 (341-397)||(52568326-52568382)
chr3 (342-397)||(41579192-41579247)
chr3 (264-323)||(46413246-46413305)
chr3 (80-134)||(2646145-2646199)
chr3 (339-397)||(34692182-34692240)
chr3 (339-397)||(43478285-43478343)
chr3 (62-128)||(44928466-44928532)
chr3 (339-397)||(45099355-45099413)
chr3 (80-134)||(46405901-46405955)
chr3 (339-397)||(49611409-49611467)
chr3 (80-118)||(50998298-50998336)
chr3 (62-128)||(51012433-51012499)
chr3 (12-61)||(27096896-27096945)
chr3 (155-303)||(30193623-30193774)
chr3 (80-128)||(54391338-54391386)
[»] chr6 (30 HSPs)
chr6 (62-311)||(13616869-13617122)
chr6 (62-325)||(13403796-13404063)
chr6 (62-325)||(32026579-32026846)
chr6 (62-325)||(32036638-32036905)
chr6 (62-325)||(34802139-34802407)
chr6 (155-325)||(6206449-6206619)
chr6 (155-325)||(11693416-11693586)
chr6 (155-325)||(27641139-27641309)
chr6 (155-310)||(32691680-32691835)
chr6 (155-323)||(14123787-14123958)
chr6 (155-288)||(35020248-35020380)
chr6 (185-311)||(29067587-29067713)
chr6 (185-311)||(29109176-29109302)
chr6 (155-323)||(12397876-12398046)
chr6 (155-323)||(20241309-20241480)
chr6 (155-323)||(22135293-22135464)
chr6 (155-323)||(22142646-22142817)
chr6 (155-320)||(32133629-32133797)
chr6 (62-128)||(29067471-29067537)
chr6 (62-128)||(29109060-29109126)
chr6 (155-291)||(30763971-30764110)
chr6 (64-128)||(35020411-35020475)
chr6 (231-291)||(17464487-17464547)
chr6 (155-291)||(33201361-33201500)
chr6 (80-134)||(6206370-6206424)
chr6 (80-134)||(11693337-11693391)
chr6 (80-138)||(32691856-32691914)
chr6 (23-59)||(30764178-30764214)
chr6 (23-59)||(30764205-30764241)
chr6 (23-59)||(30764232-30764268)
[»] scaffold0176 (2 HSPs)
scaffold0176 (158-397)||(2862-3099)
scaffold0176 (62-125)||(2762-2825)
[»] scaffold0618 (3 HSPs)
scaffold0618 (156-321)||(4519-4684)
scaffold0618 (62-134)||(4715-4787)
scaffold0618 (342-397)||(4441-4497)
[»] scaffold0494 (2 HSPs)
scaffold0494 (155-325)||(5798-5968)
scaffold0494 (80-138)||(5989-6047)
[»] scaffold0859 (2 HSPs)
scaffold0859 (155-320)||(1416-1584)
scaffold0859 (341-397)||(1603-1659)
[»] scaffold0589 (2 HSPs)
scaffold0589 (155-310)||(5380-5538)
scaffold0589 (62-99)||(5261-5298)
[»] scaffold0192 (3 HSPs)
scaffold0192 (64-128)||(17112-17176)
scaffold0192 (341-397)||(16969-17025)
scaffold0192 (157-200)||(17037-17080)
[»] scaffold0258 (1 HSPs)
scaffold0258 (155-289)||(9570-9707)
[»] scaffold0500 (1 HSPs)
scaffold0500 (231-323)||(1571-1663)


Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 397
Target Start/End: Original strand, 26494384 - 26494786
Alignment:
Q  1 gtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaatacgcgattttaatcgaaattatttcaaatgcgattttat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  26494384 gtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaatacgcaattttaatcgaaattattccaaatgcgattttat 26494483  T
Q  101 tttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn---tccaaaacaattaggcattaaaagccattacattcagtcttcc 197  Q
    | |||||||||||||||||||||||||||||| | |||                   |||||||||||||||||||||||||||||||||||||||||||    
T  26494484 tctaagtaccataatgtcaagcaaaatgcgcgagacacaaaaaaaaacatgaaaaaatccaaaacaattaggcattaaaagccattacattcagtcttcc 26494583  T
Q  198 tcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcg 297  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||||| |||||||||  |||    
T  26494584 tcgtcatacaagtcaatcgggttgcccgctacagtccctggagcaccttcttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacttcg 26494683  T
Q  298 actgattgtacaccagcatcttcgaac---cnnnnnnnnnnnnncggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttc 394  Q
    |||||||||||||| ||| ||||||||                 ||||| |||||||||||||||||||||||||||||  | |||||||||||||||||    
T  26494684 actgattgtacacctgcaccttcgaactttttttttttttttttcggaatcatcacaaacaatttcgtgtcatgtaataggcgatttttctttgttcttc 26494783  T
Q  395 tca 397  Q
    |||    
T  26494784 tca 26494786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 157 - 397
Target Start/End: Original strand, 29437019 - 29437255
Alignment:
Q  157 caaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttg 256  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||  ||||||||    
T  29437019 caaaacaattaggcattaaaagccattacattcattcttcttcgtcacacaagtcaatcgggttgcccgctacagtccct-gggcaccttgttttggttg 29437117  T
Q  257 atgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaa 356  Q
    | |||||||||| ||||||||||||| |||||||||  |||| |||||||||||||||| |||||||||             | ||||||||||||||||    
T  29437118 aggaccaaaataacatgtcctcccgctcctcctcaacttcgagtgattgtacaccagcaccttcgaacc---ctttttttttccgaaccatcacaaacaa 29437214  T
Q  357 tttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||| ||||| ||| || ||||||||||||||||||||    
T  29437215 tttcgtgccatgtcatagacgatttttctttgttcttctca 29437255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 62 - 397
Target Start/End: Complemental strand, 42571011 - 42570671
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  42571011 acgcgactttaatcgatattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaatagaacataaaaaaatcc 42570912  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||  |||||||||    
T  42570911 aaaataattaggcattaaaagtcattacattcattcttcctcgtcacacaagtcaatcgggttgccctctacagtccctgaggcaccttgttttggttga 42570812  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaac-cnnnnnnnnnnnnncggaaccatcacaaacaa 356  Q
     |||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||| |||||||| |             ||||||||||||||||||    
T  42570811 ggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacgccggcaccttcgaactctttttttttttttcggaaccatcacaaacaa 42570712  T
Q  357 tttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    || |||| ||||| |||  ||||||||||||||||| ||||    
T  42570711 ttccgtgccatgtcataggcaatttttctttgttctactca 42570671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 69 - 325
Target Start/End: Complemental strand, 35525409 - 35525150
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tccaaaacaa 164  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| | |||                    ||||||||||    
T  35525409 tttaatcaaaattatttcaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgtgacacaaaaataaaacataaaaaaatccaaaacaa 35525310  T
Q  165 ttaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaa 264  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||  |||||||||||||||  ||||||||| ||||||    
T  35525309 ttaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgg-ttgcccgctacattccctggggcaccttgttttggttgaggaccaa 35525211  T
Q  265 aatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||| ||||    
T  35525210 aatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcaaacc 35525150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 158 - 397
Target Start/End: Original strand, 41803312 - 41803549
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| |||| |||| ||||||  |||||||||    
T  41803312 aaaacaattaggccttaaaagccattacattcattcttccttgtcacacaagtcaatcgggttgcccgctacagtccttgggacaccttgttttggttga 41803411  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaat 357  Q
     |||||||||| ||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||              ||||||||||||||||||    
T  41803412 ggaccaaaataacatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcgaacccttctttttttt--ggaaccatcacaaacaat 41803509  T
Q  358 ttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||| ||| |||| |||  | ||||||||||||||||||||    
T  41803510 ttcttgttatgtcataggcgatttttctttgttcttctca 41803549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 62 - 397
Target Start/End: Original strand, 36910867 - 36911205
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| || ||||||| ||||| |||                    |||    
T  36910867 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgttaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 36910966  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||| |||||||||||||||| | ||| ||||| |||||||||||  ||||||||| ||||||||| ||||| ||||||||||||||||  |||||||||    
T  36910967 aaaataattaggcattaaaagtctttatattcattcttcctcgtcgcacaagtcaaccgggttgcc-gctacagtccctggggcaccttgttttggttga 36911065  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaat 357  Q
     |||||||||||||||||||||||| ||| ||||| |||||||||||||||||| ||| |||||||||             |||||||||||||||||||    
T  36911066 ggaccaaaatagcatgtcctcccgctccttctcaacctcgactgattgtacaccggcaccttcgaacccttctttttttttcggaaccatcacaaacaat 36911165  T
Q  358 ttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||| ||||| |||    ||||||||||||||||||||    
T  36911166 ttcgtgccatgtcatatgtgatttttctttgttcttctca 36911205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 155 - 324
Target Start/End: Complemental strand, 24363190 - 24363021
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| |||||||| |||| |||||||| |||||||| ||||||    
T  24363190 tccaaaacaattaggcattagaagccattacattcattcttcctcgtcacacaagtcaatcaggttgcccactacagtccctggagcaccttcttttggt 24363091  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaac 324  Q
    ||| |||||||||||||| ||||||| | ||||||||| | |||||||||||||||| ||| ||||||||    
T  24363090 tgaggaccaaaatagcatatcctcccactcctcctcaaccccgactgattgtacaccggcaccttcgaac 24363021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 155 - 311
Target Start/End: Original strand, 49397729 - 49397885
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||| ||||||||| |  ||||||    
T  49397729 tccaaaacaattaggcattaaaagccattacattcattcttcatcgtcacacaagtcaatcgggttgcccgctacagtccttggggcaccgtgttttggt 49397828  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacacc 311  Q
     |||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||    
T  49397829 cgatgaccaaaatagtatgtcctcccgctcatcctcaacctcgactgattgtacacc 49397885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 397
Target Start/End: Original strand, 13974009 - 13974250
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||| |||||||| |||||||||||| |||||||||||| |||||| |||||||||||||||||| ||||||||||||||||  ||||||    
T  13974009 tccaaaacaattagacattaaaaaccattacattcattcttcctcgtcacacaagttaatcgggttgcccgctacagtccctggggcaccttgttttggt 13974108  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaac 354  Q
    ||| || ||||||||||||||||||  | ||||||||| || || |||||||||||| ||| |||| ||||             ||||||||||||||||    
T  13974109 tgaggaacaaaatagcatgtcctccatctcctcctcaacctggagtgattgtacaccggcaccttcaaacc-ctttttttttttcggaaccatcacaaac 13974207  T
Q  355 aatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||| ||||||||| |||| | |||||| |||||||||||||    
T  13974208 aattttgtgtcatgtcataagcgatttttatttgttcttctca 13974250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 18974394 - 18974564
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||  ||||||    
T  18974394 tccaaaacaattaggcattaaaacccattacattcattcttcctcgtcacacaagtcaatcgggttgtccgctacagtccctggggcaccttgttttggt 18974493  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| |  ||||| ||||||||| |||  ||||||||    
T  18974494 tgaggaccgaaatagcatgtcctcccgctcctcctcaaccaggactgtttgtacaccggcactttcgaacc 18974564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 62 - 397
Target Start/End: Original strand, 49428325 - 49428662
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  49428325 acgcgactttaatcaaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 49428424  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| |||| |||| |||||||||| |||| ||||||| || |||||  |||||||||    
T  49428425 aaaacaattaggcattaaaagccattatattcattcttcctcgtcacacaaatcaaccgggttgcccactacagtccctgcggtaccttgttttggttga 49428524  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaat 357  Q
     |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||             |||||||||| ||||||||    
T  49428525 ggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttcttttttt--cggaaccatcgcaaacaat 49428622  T
Q  358 ttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||| || || |||  | ||||||||||||||||||||    
T  49428623 ttcgtgccacgtcataggcgatttttctttgttcttctca 49428662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 69 - 325
Target Start/End: Complemental strand, 46142667 - 46142408
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tccaaaacaa 164  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||||| ||||| |||                    ||||||||||    
T  46142667 tttaatcgaaattattccaaatgcggttttattctaagtaccataatgtcaaacaaaatgtgcgcgacacgaaaataaaacataaaaaaatccaaaacaa 46142568  T
Q  165 ttaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaa 264  Q
    ||||||| |||  ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||  ||||||||| ||||||    
T  46142567 ttaggcaataag-gccattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacagtcccaggggcaccttgttttggttgaggaccaa 46142469  T
Q  265 aatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||||||||||||||||| ||||||||| ||  |||||||||||||| ||| |||||||||    
T  46142468 aatagcatgtcctcccgctcctcctcaacctgaactgattgtacaccggcaccttcgaacc 46142408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 62 - 325
Target Start/End: Original strand, 48227497 - 48227764
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  48227497 acgcgactttaatcaaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 48227596  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||||||| || |||||  |||||||||    
T  48227597 aaaataattaggctttaaaagccattacattcattcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctgcggtaccttgttttggttga 48227696  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||||| ||| ||||||||| |||||  ||||||||| | ||| |||||||||    
T  48227697 ggaccaaaatagcatgtcctctcgctcctcctcaacctcgagcgattgtacatcggcaccttcgaacc 48227764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 69 - 397
Target Start/End: Original strand, 6436706 - 6437047
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tccaaaacaa 164  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| || || |||                    ||||||||||    
T  6436706 tttaatcgaaattatttcaaatacgattttattctaagtaccataatgtcaaacaaaatgtgcacgacacgaaaataaaacataaaaaaatccaaaacaa 6436805  T
Q  165 ttaggcattaaaagccattacattcagtcttcctcgtcat-------acaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||||||||||||||||||||||||| ||||||||||||        |||||||||||||||||||||||||  ||||||||||||| |  |||||||||    
T  6436806 ttaggcattaaaagccattacattcattcttcctcgtcagtcgtcacacaagtcaatcgggttgcccgctacaatccctggggcaccatgttttggttga 6436905  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnn--cggaaccatcacaaaca 355  Q
     |||||||||||||||||||||||| |||||||||| | |||| |||||||||| |||  ||||||||               |||||||||||||||||    
T  6436906 ggaccaaaatagcatgtcctcccgctcctcctcaatttggactaattgtacaccggcacattcgaacctttttttttttttttcggaaccatcacaaaca 6437005  T
Q  356 atttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||| |||| ||||| |||  | ||||||||||||||||||||    
T  6437006 attccgtgccatgtcataggcgatttttctttgttcttctca 6437047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 155 - 310
Target Start/End: Complemental strand, 13634542 - 13634387
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  13634542 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 13634443  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacac 310  Q
    ||| |||| |||||||||||||||||||  |||||||| ||||| |||||||||||    
T  13634442 tgaggaccgaaatagcatgtcctcccgctactcctcaacctcgagtgattgtacac 13634387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 163 - 325
Target Start/End: Complemental strand, 49925564 - 49925402
Alignment:
Q  163 aattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgacc 262  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||  ||||||||  ||||||||| ||||    
T  49925564 aattaggcattaaaaaccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctaaggcaccttgttttggttgaggacc 49925465  T
Q  263 aaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     ||||| ||||||||||||| |||| |||| ||||| |||||||||||| |||  ||||||||    
T  49925464 gaaataacatgtcctcccgctcctcgtcaacctcgagtgattgtacaccggcacattcgaacc 49925402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 158 - 311
Target Start/End: Complemental strand, 27485842 - 27485690
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||||||||||||||| |||||||||||||||| || ||||||||| ||||||||||||||||  ||||||| || |||| ||||||||  |||||||||    
T  27485842 aaaacaattaggcatttaaagccattacattcattcatcctcgtcacacaagtcaatcgggttttccgctacagt-cctgcggcaccttgttttggttga 27485744  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacacc 311  Q
     ||||||||||||||||||||| || ||||||||| ||||| ||||||||||||    
T  27485743 ggaccaaaatagcatgtcctcctgctcctcctcaacctcgagtgattgtacacc 27485690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 185 - 397
Target Start/End: Original strand, 51270916 - 51271126
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || ||||||||| |||||||||||||||| |||||||| ||||||| ||||||||  ||||||||| |||||||||||||||||||||||| |    
T  51270916 cattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 51271015  T
Q  285 ctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttc 384  Q
    |||||||| ||||| ||| |||||||| ||| |||||||||             |||||||||| ||||||||| ||||||| || |||  | |||||||    
T  51271016 ctcctcaacctcgagtgaatgtacaccggcaccttcgaacccttcttttttt--cggaaccatcgcaaacaattccgtgtcacgtcataggcgatttttc 51271113  T
Q  385 tttgttcttctca 397  Q
    |||||||||||||    
T  51271114 tttgttcttctca 51271126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 23343597 - 23343765
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   |||||| ||| |||||||||| |||||| || | ||  |||||||||||||| | |||    
T  23343597 tccaaaacaattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacaatccctggggcacctgctttt 23343696  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| ||||    
T  23343697 ggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttc 23343765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 29761273 - 29761148
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || ||||||||| ||||| |||||||| | |||||||| ||||||| ||||||||  ||||||||| |||||||||||||||||||||||| |    
T  29761273 cattcattcatcctcgtcacacaagccaatcgggattcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 29761174  T
Q  285 ctcctcaatctcgactgattgtacac 310  Q
    |||||||| ||||| |||||||||||    
T  29761173 ctcctcaacctcgagtgattgtacac 29761148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 35586032 - 35585861
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||||| ||| |||||||||| |||||| || | || ||||||||||||||| | |||    
T  35586032 tccaaaacaattagatattacaacacattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctgctttt 35585933  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  35585932 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 35585861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 14172802 - 14172713
Alignment:
Q  236 tggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||    
T  14172802 tggggcaccttcttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcgaacc 14172713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 15355914 - 15355743
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattc---agtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||     |||||||| ||| |||||||||| |||||| || | |  |||||||||| |||| | |||    
T  15355914 tccaaaacaattagatattacaacccattacattcgatcatcttcctcatcacacaagtcaattgggttgtcctcgatagtccctggggtacctgctttt 15355815  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  15355814 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 15355743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 237 - 325
Target Start/End: Complemental strand, 26634249 - 26634161
Alignment:
Q  237 ggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||    
T  26634249 ggggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcgaacc 26634161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 315
Target Start/End: Original strand, 37779266 - 37779389
Alignment:
Q  192 tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||||| ||| |||||||||| |||||| || | || ||||||||||||||| | ||||| ||| |||||||||||||||||||||| | ||||||||    
T  37779266 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctgcttttggctgaggaccaaaatagcatgtcctcccactcctcctca 37779365  T
Q  292 atctcgactgattgtacaccagca 315  Q
    | ||||| ||||| ||||||||||    
T  37779366 acctcgaatgattatacaccagca 37779389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 38044334 - 38044163
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   |||||| ||| ||| |||||| |||||| |  | || ||||||| ||||||| | |||    
T  38044334 tccaaaacaattagatattacaacccattacattcaatcatcttcctcatcacacaggtcaattgggttgtcgtcgacagtccctgaggcacctgctttt 38044235  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    |||||| ||| |||||||||||||||||||| ||||||||| ||||| ||||| ||||||| || |||||||    
T  38044234 ggttgaggacaaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccaacaccttcgaa 38044163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 24363330 - 24363219
Alignment:
Q  23 tttaatcgaaattattcaatacgcaagtttaatcgaaatacgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagc 122  Q
    ||||| |||||||||||||||||| | |||||||||||||| ||||||| |  |||||||||  ||| ||||||| |||  ||||||||||||||| |||    
T  24363330 tttaaccgaaattattcaatacgcgattttaatcgaaatacacgattttgaatgaaattattcaaaacgcgatttcattcaaagtaccataatgtccagc 24363231  T
Q  123 aaaatgcgcgcg 134  Q
    ||||||||||||    
T  24363230 aaaatgcgcgcg 24363219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 323
Target Start/End: Complemental strand, 39856371 - 39856202
Alignment:
Q  157 caaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttgg 253  Q
    ||||||||||||  |||| || |||||||||||| ||   |||||| ||| |||||||||| |||||  |  | || ||||||||||||||| | |||||    
T  39856371 caaaacaattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttttcttcgacagtccctggggcacctgcttttgg 39856272  T
Q  254 ttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
     ||| ||||||||||||||||||||| || ||||||||| ||||| ||||| ||||||| || |||||||    
T  39856271 ctgaggaccaaaatagcatgtcctcctgctcctcctcaacctcgaatgattatacaccaacaccttcgaa 39856202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 222 - 325
Target Start/End: Complemental strand, 44336974 - 44336871
Alignment:
Q  222 cccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcg 321  Q
    |||||||| ||||||| ||||||||  ||||||||| ||||||||||||||||||||||||  ||| |||| ||||| |||||||||||| ||| |||||    
T  44336974 cccgctacagtccctgcggcaccttgatttggttgaggaccaaaatagcatgtcctcccgcttctcttcaacctcgagtgattgtacaccggcaccttcg 44336875  T
Q  322 aacc 325  Q
    ||||    
T  44336874 aacc 44336871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 287
Target Start/End: Original strand, 13284540 - 13284675
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||| |||||||||| || |||||||||||| ||   |||||| ||| |||| |||||||||||||||||||| |||||| |||||| | | |||    
T  13284540 tccaaaacatttaggcattagaaaccattacattcattcatcttcctcatcacacaaatcaatcgggttgcccgctacagtcccttgggcacttgctttt 13284639  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctc 287  Q
      |||| |||||||||||||||||||| ||| ||||    
T  13284640 cattgaggaccaaaatagcatgtcctctcgctcctc 13284675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 17685459 - 17685296
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattc---agtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||     |||||||| ||| |||||||||| ||||||  | | || |||||| |||||||| | |||    
T  17685459 tccaaaacaattagatattacaacccattacattctatcatcttcctcatcacacaagtcaattgggttgtactcgacagtccctagggcacctgctttt 17685360  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagca 315  Q
    || ||| |||||||||||||||||||||||| ||||||||| ||||| ||||  ||||||||||    
T  17685359 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgatcatacaccagca 17685296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 35186081 - 35186252
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcat---acaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| || || || ||||   |||||||||| |||||| || | || ||||||||||||| | | |||    
T  35186081 tccaaaacaattagatattacaacccattacattcaatcatcttcctcatgacacaagtcaattgggttgtcctcgacagtccctggggcacttgctttt 35186180  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || |||  ||||||||||||||| ||||||| ||||||||| ||||| ||||| ||||||| || |||||||    
T  35186181 ggctgagaaccaaaatagcatgttctcccgctcctcctcaacctcgaatgattatacaccaccaccttcgaa 35186252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 49260809 - 49260638
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||| ||||||  |||| || |||||||||||| ||   |||||| ||| |||||||||| |||||| || | || |||||||||| |||| | |||    
T  49260809 tccaaaataattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggtacctgctttt 49260710  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| ||||||||||||||||||| |||| | ||||||| ||||| | ||| |||||||||| |||||||    
T  49260709 ggctgaggaccaaaatagcatgtccttccgctcatcctcaacctcgaatcattatacaccagcaccttcgaa 49260638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 320
Target Start/End: Complemental strand, 16531320 - 16531152
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagt---cttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||||||||| ||||| ||||||||| |   |||||||||||   || ||||| |||||| || | || |||| |||||||||| | |||    
T  16531320 tccaaaacaattaggcattacaagccgttacattcaattatcttcctcgtcactgaactcaattgggttgtcctcgacagtccttggggcacctgctttt 16531221  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    |||||| || ||||||||||||||||||| | ||||||||  || || | |||||||||| ||| ||||    
T  16531220 ggttgaggatcaaaatagcatgtcctcccactcctcctcagcctagaataattgtacaccggcaccttc 16531152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 27485942 - 27485876
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  27485942 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 27485876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 29761389 - 29761323
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  29761389 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 29761323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 40532461 - 40532343
Alignment:
Q  198 tcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcg 297  Q
    |||||| |||||||||||| |||| || | |||||||||| ||||||| | ||||| ||| ||| |||||||||||||||||||| |||||||||  ||     
T  40532461 tcgtcacacaagtcaatcgagttgtcctcgacggtccctgaggcacctgcttttggctgaggacaaaaatagcatgtcctcccgctcctcctcaacttca 40532362  T
Q  298 actgattgtacaccagcat 316  Q
    | ||||| |||||||||||    
T  40532361 aatgattatacaccagcat 40532343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 51270799 - 51270865
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  51270799 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 51270865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 198 - 320
Target Start/End: Complemental strand, 12790354 - 12790235
Alignment:
Q  198 tcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcg 297  Q
    |||||| ||||| ||||||||||| || | || ||||||||||||||| | ||||| ||| ||||||||||||||||||||||    |||||||| ||||    
T  12790354 tcgtcacacaaggcaatcgggttgtcctcgacagtccctggggcacctgcttttggctgaggaccaaaatagcatgtcctccc---actcctcaacctcg 12790258  T
Q  298 actgattgtacaccagcatcttc 320  Q
    | ||||| |||||||||| ||||    
T  12790257 aatgattatacaccagcaccttc 12790235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 41803210 - 41803281
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgc 133  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||| ||||    
T  41803210 acgcgactttaatcgaaattattttaaatgcgattttattctaagcaccataatgtcaaacaaaatgtgcgc 41803281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 14172970 - 14172912
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaat 127  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||    
T  14172970 tttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaat 14172912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 18974303 - 18974368
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||||||| ||||||| |||||    
T  18974303 tttaatcgaaattattccaaatgtgattttattctaagtaccataatgtcaaacaaaatgtgcgcg 18974368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 24269497 - 24269327
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||||| ||| |||||||||| | | || || | || |||||| |||||||| | |||    
T  24269497 tccaaaacaattagatattacaacgcattacattcaatcatcttcctcatcacacaagtcaattgagctgtcctcgacagtccctagggcacctgctttt 24269398  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    ||  || |||||||||||||||||||||||| ||||||||| ||||| ||| | |||||||||| |||||||    
T  24269397 ggccgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatga-tatacaccagcaccttcgaa 24269327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 13973918 - 13973983
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||||| ||| ||||||| |||||    
T  13973918 tttaatcgaaattattccaaatgcgattttattctaagtagcataatgccaaacaaaatgtgcgcg 13973983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 14771901 - 14771762
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   |||||||||| |||||||||| |||||  || | |   ||| |||||||||| | |||    
T  14771901 tccaaaacaattagatattacaatccattacattcaatcatcttcctcgtcacacaagtcaattgggttatcctcgatattccttggggcacctgctttt 14771802  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    ||||||  ||||||||| ||||||||||||| ||||||||    
T  14771801 ggttgagaaccaaaatatcatgtcctcccgctcctcctca 14771762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24363379 - 24363319
Alignment:
Q  1 gtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 61  Q
    |||||||||  ||||| ||||||||||||||||||||||||||||| ||||||| ||||||    
T  24363379 gtctttattcgaatacgcaatttttaatcgaaattattcaatacgcgagtttaaccgaaat 24363319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 22528470 - 22528533
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcg 132  Q
    ||||||| |||||||| ||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  22528470 tttaatcaaaattattccaaatgcaattttattctaagtaccataatgtcaaacaaagtgcgcg 22528533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 31451543 - 31451454
Alignment:
Q  192 tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccg 281  Q
    ||||||| |||| |||||||||| |||||| || | || ||||| ||||||| | | ||||||||| |||||||||||||||||| ||||    
T  31451543 tcttccttgtcacacaagtcaattgggttgtcctcaacagtccccggggcacttgcttttggttgaggaccaaaatagcatgtccacccg 31451454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 29436944 - 29436992
Alignment:
Q  86 caaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  29436944 caaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcg 29436992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 49397638 - 49397696
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||||||||||||| ||| |||||||||||| ||||||||||||| |||| |||||||    
T  49397638 tttaatcgaaattattccaa-tgcgattttattctaagtaccataatatcaaacaaaatg 49397696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 13284687 - 13284745
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||||||||||||| |||||||||| |||  | |||||||||| |||||||||    
T  13284687 cggaaccatcacaaacaattccgtgtcatgtcataggcgatttttctttcttcttctca 13284745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 18974591 - 18974649
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||||||||||||| |||| ||||| |||  ||||||||||||| ||||||||    
T  18974591 cggaaccatcacaaacaattacgtgccatgtcataggcaatttttctttgatcttctca 18974649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 49397911 - 49397969
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||||||||||||||  ||| ||||| ||| || ||||||||||||||||||||    
T  49397911 cggaaccatcacaaacaattctgtgccatgtcatagacgatttttctttgttcttctca 49397969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 35185989 - 35186053
Alignment:
Q  64 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||| |||||||||  |||||||| ||||||  ||||||||  |||||||||||||||    
T  35185989 gcgattttaattgaaattattcaaaatgcgaatttattcaaagtaccaatatgtcaagcaaaatg 35186053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 39856493 - 39856389
Alignment:
Q  32 aattattcaatacgcaagtttaatcgaaat--------acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagca 123  Q
    |||||||||| |||||| ||||||||||||        ||||||||||||| |||||||||| ||| || | ||||||  ||||||||  ||||||||||    
T  39856493 aattattcaaaacgcaactttaatcgaaattattcaaaacgcgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagca 39856394  T
Q  124 aaatg 128  Q
    |||||    
T  39856393 aaatg 39856389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 49925621 - 49925582
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttatt 101  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  49925621 acgcgactttaatcgaaattattccaaatgcgattttatt 49925582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 13634621 - 13634563
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| ||||| |||    
T  13634621 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcgacac 13634563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 38044416 - 38044350
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||||| |||||||||| ||| || | ||||||  ||||||||  |||||||||||||||    
T  38044416 acgcgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagcaaaatg 38044350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 13284410 - 13284459
Alignment:
Q  12 aatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 61  Q
    ||||| |||||||||||| |||||||||||||||| | ||||||| ||||    
T  13284410 aatacgcaatttttaatcaaaattattcaatacgcgactttaatcaaaat 13284459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 19261628 - 19261596
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattca 190  Q
    ||||||||||||||||| |||||||||||||||    
T  19261628 aaaacaattaggcattacaagccattacattca 19261596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 35185961 - 35185997
Alignment:
Q  63 cgcgattttaatcgaaattatttcaaatgcgatttta 99  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  35185961 cgcgaatttaatcgaaattattccaaatgcgatttta 35185997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 6e-81; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 35927363 - 35927037
Alignment:
Q  1 gtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaatacgcgattttaatcgaaattatttcaaatgcgattttat 100  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||||||    
T  35927363 gtctttattcaaatacgcaatttttaatcgaaattattcaatacgcaagtttaatcgaaatacgcgattttaaccgaaattattcaaaacgcgattttat 35927264  T
Q  101 tttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tccaaaacaattaggcattaaaagccattacattcagtcttc 196  Q
    |  ||||||||||||| ||||||||||||||||| |||                    ||||||| |||||||||||  ||||||||||||||| |||||    
T  35927263 tcaaagtaccataatgacaagcaaaatgcgcgcgacacaaaaaaaaaacataaaaaaatccaaaataattaggcattggaagccattacattcattcttc 35927164  T
Q  197 ctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctc 296  Q
    || |||| ||||| |||||||||| |||||||  ||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||    
T  35927163 ctggtcacacaagccaatcgggtttcccgcta--gtccctggggcaccttcttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctc 35927066  T
Q  297 gactgattgtacaccagcatcttcgaacc 325  Q
    ||||||||||||| | ||| |||||||||    
T  35927065 gactgattgtacatcggcaccttcgaacc 35927037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 62 - 325
Target Start/End: Complemental strand, 34683151 - 34682884
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  34683151 acgcgactttaatcgaaattatttcaaatgcaattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 34683052  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||| |||||  |||||||||    
T  34683051 aaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgagttgcccgctacagtccctggggaaccttgttttggttga 34682952  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||||||||| ||||||||| ||||||||||||||||||  || |||||||||    
T  34682951 ggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccgtcaccttcgaacc 34682884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 69 - 397
Target Start/End: Original strand, 25499073 - 25499403
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tccaaaacaa 164  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| ||||| |||                    ||||||||||    
T  25499073 tttaatcgaaattatttcaaatgcgattttattctaagtaccgtaatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatccaaaacaa 25499172  T
Q  165 ttaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaa 264  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| |||| |||||||||||  ||||||||| ||||||    
T  25499173 ttaggcattaaaagccattacattcattcatcctcgtcacacaagtcaatcgggttgcccgctacagtccttggggcaccttgttttggttgaggaccaa 25499272  T
Q  265 aatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaatttcgtgt 364  Q
    ||||| |||||||||||| ||||||| | || ||||||||||||||| ||| |||||||||             ||||||||||||||||||||   ||     
T  25499273 aatagtatgtcctcccgctcctcctccacctggactgattgtacaccggcaccttcgaacc--cttctttttttcggaaccatcacaaacaattctatgc 25499370  T
Q  365 catgtaataaacaatttttctttgttcttctca 397  Q
    ||||| |||| ||||||||||||||||||||||    
T  25499371 catgtcataagcaatttttctttgttcttctca 25499403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 62 - 397
Target Start/End: Original strand, 3602329 - 3602663
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn--tccaa 159  Q
    |||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                  |||||    
T  3602329 acgcgactttaatcaaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacgaaaataaaacataaaaatccaa 3602428  T
Q  160 aacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatg 259  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||| |||||| |||||||||  ||||||||| |    
T  3602429 aacaattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcggattgtccgctacagtccct-gggcaccttgttttggttgagg 3602527  T
Q  260 accaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaattt 359  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||||||  || |||||||||             |||||||||||||||||||||    
T  3602528 accaaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccgccaccttcgaacc--cttctttttttcggaaccatcacaaacaattt 3602625  T
Q  360 cgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||| |||||  ||  | ||||||||||||||||||||    
T  3602626 cgtgccatgtcgtaggcgatttttctttgttcttctca 3602663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 155 - 397
Target Start/End: Original strand, 18309342 - 18309583
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||||||||||| |||||| |||||||||  ||||||    
T  18309342 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaatgcaatcgggttgcccgctacagtcccttgggcaccttgttttggt 18309441  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaac 354  Q
    ||| |||||||||||||||||||||||| ||||||||| || ||||||||||||||| ||| |||||||||             ||||||||||||||||    
T  18309442 tgaggaccaaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccggcaccttcgaacc-cttcttttttttcggaaccatcacaaac 18309540  T
Q  355 aatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||  ||||||||| |||  | ||||||||||||||||||||    
T  18309541 aattatgtgtcatgtcataggcgatttttctttgttcttctca 18309583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 157 - 325
Target Start/End: Original strand, 35566355 - 35566523
Alignment:
Q  157 caaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttg 256  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||| ||||||||  ||||||||    
T  35566355 caaaacaattaggcattaagagccattacattcaatcttcctcgtcacacaagtcaatcgggttggccgctacagtccctgaggcaccttgttttggttg 35566454  T
Q  257 atgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    | |||||||||||||||||||| ||| || |||||| |||||||| ||||||||  ||| |||||||||    
T  35566455 aggaccaaaatagcatgtcctcacgctccgcctcaacctcgactggttgtacactggcaccttcgaacc 35566523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 11347763 - 11347933
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||| | |||| |||||||||||||||||||| ||||||| || |||||  ||||||    
T  11347763 tccaaaacaattaggcattaaaagtcattgcattcattcttcctcgtaacacaaatcaatcgggttgcccgctacagtccctgcggtaccttgttttggt 11347862  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  11347863 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 11347933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 155 - 310
Target Start/End: Original strand, 11028410 - 11028565
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  11028410 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 11028509  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacac 310  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||    
T  11028510 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacac 11028565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 1399428 - 1399258
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||  ||||||  |||||||||||||||  |||| |    
T  1399428 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaaccgggttgttcgctacaatccctggggcaccttgttttgat 1399329  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| || ||||||||||||||||||||| ||||||||| || |||| |||||||||| ||| ||| |||||    
T  1399328 tgaggatcaaaatagcatgtcctcccgctcctcctcaacctagactaattgtacaccggcacctttgaacc 1399258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 163 - 325
Target Start/End: Original strand, 8538947 - 8539109
Alignment:
Q  163 aattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgacc 262  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||||||  || |||||  ||||||||| ||||    
T  8538947 aattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctacggtaccttgttttggttgaggacc 8539046  T
Q  263 aaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||| || ||||||||| ||||| |||||||||||| ||| |||||||||    
T  8539047 gaaatagcatgtcctcctgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 8539109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 8575388 - 8575218
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||  ||||||| || |||||  ||||||    
T  8575388 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctatagtccctgcggtaccttgttttggt 8575289  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  8575288 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 8575218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 19035922 - 19035752
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| || || || ||| ||||||| ||||||| || |||||  ||||||    
T  19035922 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggt 19035823  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  19035822 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 19035752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 38855117 - 38855287
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  38855117 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 38855216  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||| ||||||||||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  38855217 tgaggaccgaaataacatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 38855287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 6477 - 6307
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||| |||| ||||| || ||  ||||||| ||||||| || |||||  ||||||    
T  6477 tccaaaacaattaggcataaaaagccattacattcattcttcctcgtcacacaaatcaataggcttaaccgctacagtccctgcggtaccttgttttggt 6378  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  6377 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 6307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 184 - 311
Target Start/End: Original strand, 20199451 - 20199578
Alignment:
Q  184 acattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgca 283  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||  ||||||||| ||||||||||||||||||||||||     
T  20199451 acattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcactttgttttggttgaggaccaaaatagcatgtcctcccgct 20199550  T
Q  284 cctcctcaatctcgactgattgtacacc 311  Q
    ||||||||| || |||||||||||||||    
T  20199551 cctcctcaacctggactgattgtacacc 20199578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 27660624 - 27660454
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||| ||||||||||| |||| ||||||| |||| |||||||| ||| ||| ||| ||||||| || |||||  ||||||    
T  27660624 tccaaaacaattaggcattaaaagtcattacattcattctttctcgtcacacaaatcaatcggcttgtccgatacagtccctgcggtaccttgttttggt 27660525  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  27660524 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 27660454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 30710562 - 30710732
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||| |||| ||||| || ||| ||||||| |||||||  | |||||  ||||||    
T  30710562 tccaaaacaattaggcattaaaagtcattacatttattcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcagtaccttgttttggt 30710661  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     || |||| ||||| ||||||||| ||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  30710662 cgaggaccgaaataacatgtcctctcgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 30710732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 7484622 - 7484451
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   |||||| ||| |||||||||| |||||  || | || ||||||||||||||| | |||    
T  7484622 tccaaaacaattagatattacaatccattacattcaatcatcttcctcatcacacaagtcaattgggttatcctcgacagtccctggggcacctgctttt 7484523  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  7484522 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 7484451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 205 - 323
Target Start/End: Original strand, 1972510 - 1972628
Alignment:
Q  205 acaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgatt 304  Q
    |||||||||| || ||| || | || ||||||||||||||| | |||| |||| |||||||||||||||||||||||| ||||||||| ||||| |||||    
T  1972510 acaagtcaattggtttgtcctcgacagtccctggggcacctgcttttgcttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgatt 1972609  T
Q  305 gtacaccagcatcttcgaa 323  Q
     |||||||||| |||||||    
T  1972610 atacaccagcaccttcgaa 1972628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 323
Target Start/End: Complemental strand, 6792536 - 6792405
Alignment:
Q  192 tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||| ||| ||| |||||||||| |||||| || | || |||||| ||||| || | ||||| ||| |||||||||||||||||||||||| ||||||||    
T  6792536 tcttgctcatcacacaagtcaattgggttgtcctcgacagtccctagggcatctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 6792437  T
Q  292 atctcgactgattgtacaccagcatcttcgaa 323  Q
    | ||||| ||||| |||||||||| |||||||    
T  6792436 acctcgaatgattatacaccagcaccttcgaa 6792405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 198 - 323
Target Start/End: Original strand, 1695934 - 1696059
Alignment:
Q  198 tcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcg 297  Q
    |||||| ||||||||||||||||| || | || |||| |||||||||| | ||||| ||| | |||||||||||||||||||||| ||||||||| ||||    
T  1695934 tcgtcacacaagtcaatcgggttgtcctcgacagtccttggggcacctgcttttggctgagggccaaaatagcatgtcctcccgctcctcctcaacctcg 1696033  T
Q  298 actgattgtacaccagcatcttcgaa 323  Q
    | | ||| ||||||| || |||||||    
T  1696034 aatcattatacaccaacaccttcgaa 1696059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 20197062 - 20197134
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  20197062 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcg 20197134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 320
Target Start/End: Complemental strand, 36349386 - 36349265
Alignment:
Q  198 tcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcg 297  Q
    |||||| | ||||||||||||||| || | || |||||||| |||||| | ||||| ||| |||||||| ||||||||||||||| | ||||||| ||||    
T  36349386 tcgtcacataagtcaatcgggttgtcctcgacagtccctggagcacctgcttttggctgaggaccaaaa-agcatgtcctcccgctcttcctcaacctcg 36349288  T
Q  298 actgattgtacaccagcatcttc 320  Q
    | ||||| |||||||||| ||||    
T  36349287 aatgattatacaccagcaccttc 36349265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 7400791 - 7400930
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||| ||||| ||||||||| ||||| ||   |||||||||| |||||||||| |||||| || | || |||| || |||||||   |||    
T  7400791 tccaaaacaattagacattacaagccattatattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgacagtccttgaggcacctgatttt 7400890  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||| |||| ||||| |||||||| |||| ||||||||    
T  7400891 ggttgaggaccgaaataacatgtccttccgctcctcctca 7400930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 8538842 - 8538914
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    |||||| ||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| ||||||| |||||    
T  8538842 acgcgactttaatcaaaattattccaaatgcaattttattttatgtaccataatgtcaaacaaaatgtgcgcg 8538914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 134
Target Start/End: Original strand, 11347666 - 11347738
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    |||||| ||||||| || ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  11347666 acgcgactttaatcaaagttattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcg 11347738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 4723136 - 4723057
Alignment:
Q  236 tggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagca 315  Q
    |||||| ||| | ||||| ||| |||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||    
T  4723136 tggggcgcctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagca 4723057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 35566263 - 35566328
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||| |||| ||||||| |||||    
T  35566263 tttaatcgaaattattccaaatgtgattttattctaagtaccataatatcaaacaaaatgtgcgcg 35566328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 1399510 - 1399460
Alignment:
Q  77 aaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaat 127  Q
    |||||||| ||||| |||||||||| |||||||||||||||||| ||||||    
T  1399510 aaattattccaaatacgattttattctaagtaccataatgtcaaacaaaat 1399460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 11028331 - 11028385
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||||||| |||||||||||||| ||||||| |||||    
T  11028331 ttattccaaatgcaattttattttaaataccataatgtcaaacaaaatgtgcgcg 11028385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 19036001 - 19035943
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| |||||||||||||||||| ||||||| ||||| |||    
T  19036001 ttattccaaatgcaattttattctaagtaccataatgtcaaacaaaatgtgcgcgacac 19035943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 28881876 - 28881930
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||||||||||| |||||||| ||||||||| |||||||| ||||||| |||||    
T  28881876 ttatttcaaatgcaattttattctaagtaccacaatgtcaaacaaaatgtgcgcg 28881930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 20197159 - 20197192
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacatt 188  Q
    ||||||||||||||||||||||||||||||||||    
T  20197159 tccaaaacaattaggcattaaaagccattacatt 20197192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 1972377 - 1972441
Alignment:
Q  64 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||| |||||||||  |||||||| ||||||  ||||||||  |||||||||||||||    
T  1972377 gcgattttaattgaaattattcaaaatgcgaatttattcaaagtaccaatatgtcaagcaaaatg 1972441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 31239140 - 31239224
Alignment:
Q  207 aagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||||| |||||| || | || |||||| |||||| | | ||||||||| ||||||||||||||||||| || | ||||||||    
T  31239140 aagtcaattgggttgtcctccacagtccctagggcacgtgcttttggttgaggaccaaaatagcatgtccttccactcctcctca 31239224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 541523 - 541465
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||| |||||||||||||| || || |||  | ||||||||||||||||||||    
T  541523 cggaaccatcgcaaacaatttcgtgccacgtcataggcgatttttctttgttcttctca 541465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 8575467 - 8575409
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| ||||| |||    
T  8575467 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcgacac 8575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 27660703 - 27660649
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  27660703 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcg 27660649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 30710483 - 30710537
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| |||| ||||||||||||| ||||||| |||||    
T  30710483 ttattccaaatgcaattttattataagcaccataatgtcaaacaaaatgtgcgcg 30710537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 34682862 - 34682804
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||||||||||||||  ||| ||||| |||  | ||||||||||||||||||||    
T  34682862 cggaaccatcacaaacaattatgtgccatgtcataggcgatttttctttgttcttctca 34682804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 38855038 - 38855092
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  38855038 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcg 38855092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 41202345 - 41202287
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||||||||||||||  ||| ||||| |||  | ||||||||||||||||||||    
T  41202345 cggaaccatcacaaacaattatgtgccatgtcatagccgatttttctttgttcttctca 41202287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 1972348 - 1972385
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgatttta 99  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  1972348 acgcgactttaatcgaaattattccaaatgcgatttta 1972385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 6792698 - 6792661
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgatttta 99  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  6792698 acgcgactttaatcgaaattattccaaatgcgatttta 6792661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 8531412 - 8531273
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattca---gtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||| |||||  || ||||||||| |    |||||||||||| | |||||||| |||||| |  | ||||||||| |||||| | | |||    
T  8531412 tccaaaacaattagacattactagtcattacatttaatcatcttcctcgtcacataagtcaattgggttgtcgtcgacggtccctagggcacttgctttt 8531313  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||| ||||||| || || ||| | |||| ||||||||    
T  8531312 ggttgaggaccaaagtaacaagtcattccgctcctcctca 8531273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 6792669 - 6792605
Alignment:
Q  64 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||| |||||||||  ||| |||| ||||||  ||||||||  |||||||||||||||    
T  6792669 gcgattttaattgaaattattcaaaacgcgaatttattcaaagtaccaatatgtcaagcaaaatg 6792605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 5e-78; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 69 - 397
Target Start/End: Complemental strand, 34152500 - 34152171
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tccaaaacaa 164  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| ||||| |||                    ||||||||||    
T  34152500 tttaatcgaaattatttcaaatgcgattttattctaagtatcataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatccaaaacaa 34152401  T
Q  165 ttaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaa 264  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  34152400 ttaggcattaaaagccattacattcattcttcctcgtcacacaagtcaaccgggttgcccgctacagtccctggggcaccttgatttggttgaggaccaa 34152301  T
Q  265 aatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaatttcgtgt 364  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||             ||||||||||||||||||||||||||    
T  34152300 aatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcgaacc---cttcttttttcggaaccatcacaaacaatttcgtgt 34152204  T
Q  365 catgtaataaacaatttttctttgttcttctca 397  Q
    ||||| |||  ||||||||||||||||||||||    
T  34152203 catgtcataggcaatttttctttgttcttctca 34152171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 69 - 397
Target Start/End: Complemental strand, 6281739 - 6281407
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tccaaaacaa 164  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    ||||||||||    
T  6281739 tttaatcgaaattatttcaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatccaaaacaa 6281640  T
Q  165 ttaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaa 264  Q
    ||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||  |||| |||| || |||    
T  6281639 ttaggcattaaaaaccattatattcattcttcctcgtcacacaagtcaatcgggttgcccgctaaagtccctggggcaccttgttttgattgaggatcaa 6281540  T
Q  265 aatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaatttcgtgt 364  Q
    ||||||||||||||| || ||||||||| ||||| |||||||||||| ||| |||||||||             ||||||||||||||||||||| ||||    
T  6281539 aatagcatgtcctcctgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttttttttttttcggaaccatcacaaacaattttgtgt 6281440  T
Q  365 catgtaataaacaatttttctttgttcttctca 397  Q
    || || |||    ||||||||||||||||||||    
T  6281439 cacgtcataggtgatttttctttgttcttctca 6281407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 69 - 395
Target Start/End: Complemental strand, 44559541 - 44559214
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tccaaaacaa 164  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||  |||                    ||||||||||    
T  44559541 tttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcaacacaaaaataaaacataaaaaaatccaaaacaa 44559442  T
Q  165 ttaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaa 264  Q
    |||||||||||||| ||||||||||| ||| |||||||| ||||||||| ||||||||||||||| ||| ||||||||||||  ||||||||| ||||||    
T  44559441 ttaggcattaaaagtcattacattcattctgcctcgtcacacaagtcaaacgggttgcccgctacagtctctggggcaccttgatttggttgaggaccaa 44559342  T
Q  265 aatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaatttcgtgt 364  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||| ||||             | |||||||||||||||||||| |||    
T  44559341 aatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcaaacc---cttcttttttcagaaccatcacaaacaatttcatgt 44559245  T
Q  365 catgtaataaacaatttttctttgttcttct 395  Q
    ||||| |||  | ||||||||||||||||||    
T  44559244 catgtcataggcgatttttctttgttcttct 44559214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 62 - 325
Target Start/End: Complemental strand, 956675 - 956408
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  956675 acgcgactttaatcaaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 956576  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| ||||| ||| || |||||| ||||| ||||||||||||||||  |||||||||    
T  956575 aaaacaattaggcattaaaagtcattacattcattcttcctcgtcacacaagccaaacgagttgcctgctacagtccctggggcaccttgttttggttga 956476  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||||||||| ||||||||| || ||||||||||||||| ||| |||||||||    
T  956475 ggaccaaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccggcaccttcgaacc 956408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 158 - 325
Target Start/End: Original strand, 56139979 - 56140146
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||||||||||||||||||| ||| |||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  56139979 aaaacaattaggcattaaaaaccactacattcattcatcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttga 56140078  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||||||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  56140079 ggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 56140146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 323
Target Start/End: Complemental strand, 51427415 - 51427157
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn---tccaaaacaat 165  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||  |||                   | |||||||||    
T  51427415 tttaatcgaaattatttcaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcaacacaaaaataaaacataaaaaattcaaaacaat 51427316  T
Q  166 taggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgacc-aa 264  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||  ||||||||||| ||||  ||||||||| |||| ||    
T  51427315 taggaattaaaagccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctatagtccctggggcgccttgttttggttgaggaccaaa 51427216  T
Q  265 aatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    |||||||||||||||||| ||||||||| ||||||| |||||||||  ||| |||||||    
T  51427215 aatagcatgtcctcccgctcctcctcaacctcgactaattgtacactggcaccttcgaa 51427157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 69 - 325
Target Start/End: Original strand, 49572093 - 49572353
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tccaaaacaa 164  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| |||                    ||||||||||    
T  49572093 tttaatcgaaattattccaaatgcgattttattttaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaatataaaaaaatccaaaacaa 49572192  T
Q  165 ttaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaa 264  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||| | ||||  |||||  ||||||||  ||||||||| ||||||    
T  49572193 ttaggcattaaaagtcattacattcattcttcctcgtcacacaagtcaatcgggttgcacactacaatccctatggcaccttgttttggttgaggaccaa 49572292  T
Q  265 aatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||||||||||| |||||| ||||||||| || ||||||||||||||| ||| | |||||||    
T  49572293 aatagcatgtcatcccgctcctcctcaacctggactgattgtacaccggcaccctcgaacc 49572353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 6176561 - 6176391
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  6176561 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 6176462  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  6176461 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 6176391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 21016423 - 21016253
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  21016423 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 21016324  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  21016323 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 21016253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 49095706 - 49095876
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  49095706 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 49095805  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  49095806 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 49095876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 40353022 - 40352852
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||| ||| || |||||  ||||||    
T  40353022 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtcgctgcggtaccttgttttggt 40352923  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| |||||||||||||||||  ||| |||||||||    
T  40352922 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacactggcaccttcgaacc 40352852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 41794048 - 41793878
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| || || || ||| ||||||| ||||||| || |||||  ||||||    
T  41794048 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggt 41793949  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  41793948 tgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 41793878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 49422878 - 49422712
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||    |||||||||||||  |||| |||||||||||  ||||||    
T  49422878 tccaaaataattaggcattaaaagccattacattcattcttcctcgtcacacaagtc----gggttgcccgctaaagtccttggggcaccttgttttggt 49422783  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||||||||||||||||||||| | ||||||||| |||||||||||||||||| ||| |||||||||    
T  49422782 tgaggaccaaaatagcatgtcctcccactcctcctcaacctcgactgattgtacaccggcaccttcgaacc 49422712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 158 - 325
Target Start/End: Original strand, 37867536 - 37867703
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||||||||| |||||||||||||||||||||| | |||||||||| |||||||||| |||| ||||||||| ||||||||||||||||  ||| |||||    
T  37867536 aaaacaattaagcattaaaagccattacattcattattcctcgtcacacaagtcaattgggtcgcccgctacagtccctggggcaccttgtttttgttga 37867635  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||| ||||||||||||| ||||||||| ||||| ||||| |||||| ||| |||||||||    
T  37867636 ggaccaaaataacatgtcctcccgctcctcctcaacctcgagtgattatacaccggcaccttcgaacc 37867703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 55797704 - 55797874
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| || ||| ||||||| |||| || || |||||  ||||||    
T  55797704 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaattggcttgtccgctacagtccatgcggtaccttgttttggt 55797803  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  55797804 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 55797874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 158 - 311
Target Start/End: Original strand, 9490551 - 9490704
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||||||||||||||||||||||| ||||| || || ||||| ||| ||||||||||||||||||||||||  ||||||||||||||||  ||||| |||    
T  9490551 aaaacaattaggcattaaaagccactacatccattcatcctcatcagacaagtcaatcgggttgcccgctatagtccctggggcaccttgttttggctga 9490650  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacacc 311  Q
     ||||||||||||||||||||| || ||||||||| ||||| ||||||||||||    
T  9490651 ggaccaaaatagcatgtcctccagctcctcctcaacctcgagtgattgtacacc 9490704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 155 - 397
Target Start/End: Original strand, 42887365 - 42887608
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||| ||| |||||||||| |||||| ||||  || |||||||||||| ||| || ||||||||| |||||||| |||  |||||||||||| ||||||    
T  42887365 tccaacacagttaggcattacaagccactaca--ca-tcttcctcgtcacacaggttaatcgggtttcccgctacagtcattggggcaccttcttttggt 42887461  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaac----cnnnnnnnnnnnnncggaaccatcac 350  Q
    ||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||                  ||||||||||||    
T  42887462 tgaggaccaaaataacatgtcctcccgctcctcctcaacctcgactgattgtacaccagcaccttcgaactttttttttttttttttccggaaccatcac 42887561  T
Q  351 aaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||| |||||||||| ||| || ||||||||||||||||||||    
T  42887562 aaacaattccgtgtcatgtcatagacgatttttctttgttcttctca 42887608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 34528914 - 34528774
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || ||||||||| |||||||||||||||| ||||||||  |||||| ||||||||  ||||||||| |||||||||||||||||||||||| |    
T  34528914 cattcattcatcctcgtcacacaagtcaatcgggtttcccgctacaatccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 34528815  T
Q  285 ctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||||||| ||||| |||||||||||| ||| |||||||||    
T  34528814 ctcctcaacctcgagtgattgtacaccggcaccttcgaacc 34528774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 1043836 - 1043976
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || ||||||||| |||||||||||||||| |||||||| ||||||| ||||||||  ||||||||| |||||||||||||||| ||| ||| |    
T  1043836 cattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgttctctcgctc 1043935  T
Q  285 ctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||||||| ||||| |||||||||||| ||| |||||||||    
T  1043936 ctcctcaacctcgagtgattgtacaccggcaccttcgaacc 1043976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 185 - 397
Target Start/End: Original strand, 39589872 - 39590082
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || ||||||||| |||||||||||||||| |||||||| ||||||  ||||||||  ||||||||| |||||||||||||||||||||||| |    
T  39589872 cattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctacggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 39589971  T
Q  285 ctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttc 384  Q
    |||||||| ||| | |||||||||||| ||| |||||||||             |||||||||| ||||||||| |||| || || |||  |||||||||    
T  39589972 ctcctcaacctcaagtgattgtacaccggcaccttcgaacccttcttttttt--cggaaccatcgcaaacaattacgtgacacgtcataggcaatttttc 39590069  T
Q  385 tttgttcttctca 397  Q
    |||||||||||||    
T  39590070 tttgttcttctca 39590082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 320
Target Start/End: Complemental strand, 21411106 - 21410938
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||||||| | ||||||||||||||| ||   |||||||||| |||||||||| |||||| || |  | ||||||| ||||||| | |||    
T  21411106 tccaaaacaattaggcatcacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgccagtccctgtggcacctgctttt 21411007  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    |||||| ||||||||||||||||||||||||  |||||||| || ||||||||||||||| ||| ||||    
T  21411006 ggttgaggaccaaaatagcatgtcctcccgcttctcctcaaccttgactgattgtacaccggcaccttc 21410938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 192 - 321
Target Start/End: Complemental strand, 4784430 - 4784301
Alignment:
Q  192 tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||||||||| ||| || |||| ||||||||||||| ||||||||||||| ||| ||||||||| |||||||||||||||||| ||||| ||||||||    
T  4784430 tcttcctcgtcacacaggttaatcaggttgcccgctacagtccctggggcacattcttttggttgaggaccaaaatagcatgtccccccgctcctcctca 4784331  T
Q  292 atctcgactgattgtacaccagcatcttcg 321  Q
    | ||||| |||||||||||| ||| |||||    
T  4784330 acctcgaatgattgtacaccggcaacttcg 4784301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 21412340 - 21412508
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||||||| | ||||||||||||||| ||   |||||||||| |||||||||| |||||| || |  | ||||| | ||||||| | |||    
T  21412340 tccaaaacaattaggcatcacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgccagtcccagaggcacctgctttt 21412439  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    |||||| ||||||||||||||||||||||||  |||||||| || ||||||||||||||| ||| ||||    
T  21412440 ggttgaggaccaaaatagcatgtcctcccgcttctcctcaaccttgactgattgtacaccggcaccttc 21412508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 36775612 - 36775441
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||||| ||| |||||||||| |||||| || | |||||||||||||||||| | |||    
T  36775612 tccaaaacaattagatattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacggtccctggggcacctgctttt 36775513  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||||||||||||||||||||||| ||||||||| ||||| | ||| |||||||||| |||||||    
T  36775512 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaataattatacaccagcaccttcgaa 36775441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 21170559 - 21170730
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||||| ||| |||||||||| |||||| || | || ||||| ||||||||| | |||    
T  21170559 tccaaaacaattagatattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtcccgggggcacctgctttt 21170658  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| ||||||||||||||||||| |||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  21170659 ggctgaggaccaaaatagcatgtccttccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 21170730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 51026918 - 51026747
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   |||||| ||| |||||||||| |||||| ||   || ||||||||||||||| | |||    
T  51026918 tccaaaacaattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtccttgacagtccctggggcacctgctttt 51026819  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| ||||||||||||||||| |||||| ||||||||| ||||| ||||| |||| ||||| |||||||    
T  51026818 ggctgaggaccaaaatagcatgtcatcccgctcctcctcaacctcgaatgattatacatcagcaccttcgaa 51026747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 2774100 - 2774267
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   |||||| ||| |||||||||| |||||| || | || ||||| ||||||||| | |||    
T  2774100 tccaaaacaattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccc-ggggcacctgctttt 2774198  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||| | ||| ||||| |||| ||||    
T  2774199 ggttgaagaccaaaatagcatgtcctcccgctcctcctcaacctcgaataattatacacaagcaccttc 2774267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9718159 - 9718294
Alignment:
Q  1 gtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat--------acgcgattttaatcgaaattatttcaaatgc 92  Q
    |||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| ||||        |||||| ||||||||||||||||  ||| ||    
T  9718159 gtctttattcgaatacgcaatttttaatcgaaattattcaatacgcgagtttaatcaaaattattcaatacgcgactttaatcgaaattattcaaaacgc 9718258  T
Q  93 gattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||||||  ||||||||||||||||| |||||||    
T  9718259 gattttattaaaagtaccataatgtcaaacaaaatg 9718294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 25145612 - 25145783
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||| ||||| ||||||||||||||| ||   |||||||||| | |||||||| |||||| || | || |||||||| |||||| | |||    
T  25145612 tccaaaacaattagacattacaagccattacattcaatcatcttcctcgtcacataagtcaattgggttgtcctcgacagtccctggcgcacctgctttt 25145711  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    |||||| |||| ||||| |||||||| |||| ||||||||  || | ||| ||||||||| ||| |||||||    
T  25145712 ggttgaggaccgaaataacatgtccttccgctcctcctcagcctgggctggttgtacaccggcaccttcgaa 25145783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 49816497 - 49816385
Alignment:
Q  198 tcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcg 297  Q
    |||||| ||||||||||||||||| || | || |||||| |||||||| | ||||| ||| ||||||||||||||||||||| || ||||||||| ||||    
T  49816497 tcgtcacacaagtcaatcgggttgtcctcgacagtccctagggcacctgcttttggctgaggaccaaaatagcatgtcctccagctcctcctcaacctcg 49816398  T
Q  298 actgattgtacac 310  Q
    ||||||| |||||    
T  49816397 actgattatacac 49816385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 323
Target Start/End: Complemental strand, 49791057 - 49790888
Alignment:
Q  157 caaaacaattaggcattaaaagccattacattca---gtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttgg 253  Q
    ||||||||||||  |||| || |||||||||| |    |||||||| ||| |||||||||| ||||||  | | || ||||||||||||||| | |||||    
T  49791057 caaaacaattagatattacaacccattacatttaatcatcttcctcatcacacaagtcaattgggttgttctcgacagtccctggggcacctgcttttgg 49790958  T
Q  254 ttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
     ||| |||||||||| ||||||||||||| ||||||||| ||||| ||||| |||| ||||| |||||||    
T  49790957 ctgaggaccaaaatatcatgtcctcccgctcctcctcaacctcgaatgattatacatcagcaccttcgaa 49790888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 9490451 - 9490517
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  9490451 acgcgactttaatcgaaattattccaaatgcgattttattttaagtaccataatgtcaaacaaaatg 9490517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 323
Target Start/End: Original strand, 9718340 - 9718507
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttc---ctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||||||||||| | || |||||||||||| || ||   ||||||| |||||||||| |||||| || | || |||||||| |||||| | |||||     
T  9718340 aaaacaattaggcatgacaaaccattacattcaatcatctttctcgtcacacaagtcaattgggttgtcctcgacagtccctggagcacctgc-tttggc 9718438  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    ||| |||||||||||||||||||||| | ||||||||  || ||||| ||||||||| ||| |||||||    
T  9718439 tgaggaccaaaatagcatgtcctcccactcctcctcagcctggactggttgtacaccggcaccttcgaa 9718507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 49422977 - 49422905
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  49422977 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgagcgcg 49422905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 1043718 - 1043784
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  1043718 acgcgactttaatcgaaattatttcaaatgcaattttattctaagtaccataatgtcaaacaaaatg 1043784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 56139879 - 56139945
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  56139879 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 56139945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 45940621 - 45940792
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcat---acaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||| |||||||  |||| || |||||||||||| || || |||||||   |||||||||| | |||| || | || ||| || |||||||| | |||    
T  45940621 tccaaaccaattagatattacaacccattacattcaatcatcttcgtcatcacacaagtcaattgagttgtcctcgacagtctctagggcacctgctttt 45940720  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||| ||||||||||||||||||| ||||||||| ||||| ||||| |||| ||||| |||||||    
T  45940721 ggctgaggacccaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacatcagcaccttcgaa 45940792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 4910723 - 4910624
Alignment:
Q  192 tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||||||||| |||||||||| |||||| || | || |||||| |||||||| | ||||| ||| |||||||||||||||||||||||| | ||||||    
T  4910723 tcttcctcgtcacacaagtcaattgggttgtcctcgacagtccctagggcacctgcttttggatgaggaccaaaatagcatgtcctcccgctcttcctca 4910624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 34529030 - 34528964
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||||    
T  34529030 acgcgagtttaatcgaaattattccaaatgcgattttattcgaagtaccataatgtcaaacaaaatg 34528964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 39589756 - 39589822
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||||||    
T  39589756 acgcgactttaatcgaaattattccaaatgcgatcttattctaagtaccataatgtcaaacaaaatg 39589822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 312
Target Start/End: Complemental strand, 43888574 - 43888460
Alignment:
Q  198 tcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcg 297  Q
    |||||| ||||||||||||| ||| ||   || ||||||||||||||| | ||||| ||| | |||||||||||||||||||||| ||||||||| |||     
T  43888574 tcgtcacacaagtcaatcggattgtccttgacagtccctggggcacctgcttttggctgagggccaaaatagcatgtcctcccgctcctcctcaacctca 43888475  T
Q  298 actgattgtacacca 312  Q
    | ||||| |||||||    
T  43888474 aatgattatacacca 43888460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 37867443 - 37867502
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  37867443 tttaattgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 37867502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 292
Target Start/End: Original strand, 24076205 - 24076345
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||| ||||| ||| ||||||||||| ||   |||||||||| ||||| |||| |||||| || | |  || |||||||||||| | |||    
T  24076205 tccaaaacaattagacattacaagtcattacattcaatcatcttcctcgtcacacaagacaattgggttgtcctcgagagtgcctggggcacctgctttt 24076304  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaa 292  Q
    |||||| |||| ||||| || ||||| |||| |||||||||    
T  24076305 ggttgaggaccgaaataacaagtccttccgctcctcctcaa 24076345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 21411221 - 21411152
Alignment:
Q  59 aatacgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||| ||| ||||||| ||||||||  ||| |||||||||||| |||||||||||||||||||||||||    
T  21411221 aatacacgactttaatcaaaattattcaaaacgcgattttatttaaagtaccataatgtcaagcaaaatg 21411152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 21412224 - 21412293
Alignment:
Q  59 aatacgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||| ||| ||||||| ||||||||  ||| |||||||||||| |||||||||||||||||||||||||    
T  21412224 aatacacgactttaatcaaaattattcaaaacgcgattttatttaaagtaccataatgtcaagcaaaatg 21412293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 55797625 - 55797679
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||||| |||||    
T  55797625 ttatttcaaatgcaattttattctaagtaccataatgtcaaacaaaatgtgcgcg 55797679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 323
Target Start/End: Original strand, 17292831 - 17292918
Alignment:
Q  236 tggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    |||||||||| | ||| ||||| ||||||||||||||||||||| || ||||||||  || || || ||||||||| ||| |||||||    
T  17292831 tggggcacctgctttttgttgaggaccaaaatagcatgtcctcctgctcctcctcagccttgaatggttgtacaccggcaccttcgaa 17292918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 49816644 - 49816577
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgc 129  Q
    |||||||||||||||||||||||  ||| |||| ||||||  ||||||||  ||||||||||||||||    
T  49816644 acgcgattttaatcgaaattattcaaaacgcgaatttattcaaagtaccaatatgtcaagcaaaatgc 49816577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 37959182 - 37959240
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||||||||||||||  ||||||||| |||  | ||||||||||||||||||||    
T  37959182 cggaaccatcacaaacaattatgtgtcatgtcataggcgatttttctttgttcttctca 37959240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 41794127 - 41794069
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| |||||||||||||||||| ||||||| ||||| |||    
T  41794127 ttattccaaatgcaattttattctaagtaccataatgtcaaacaaaatgtgcgcgacac 41794069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 21170437 - 21170474
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgatttta 99  Q
    |||||| |||||||||||||||||||||||||||||||    
T  21170437 acgcgactttaatcgaaattatttcaaatgcgatttta 21170474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21412185 - 21412245
Alignment:
Q  1 gtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 61  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||| | | ||||||| ||||    
T  21412185 gtctttattcaaatacgcaatttttaattgaaattattcaatacacgactttaatcaaaat 21412245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 51427142 - 51427086
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||||||||||||||  ||||||||| |||  | ||||||||||||||||||||    
T  51427142 cggaaccatcacaaacaatt--gtgtcatgtcatacgcgatttttctttgttcttctca 51427086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 4784278 - 4784220
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||||||||||||| |||| ||| | ||| |  ||||||||||||||||||||    
T  4784278 cggaaccatcacaaacaattccgtgccatttcatagatgatttttctttgttcttctca 4784220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 6176640 - 6176582
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| ||||| |||    
T  6176640 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcgacac 6176582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 21016502 - 21016444
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| ||||| |||    
T  21016502 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcgacac 21016444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 34528762 - 34528704
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||| |||||||||||||| || || |||  | ||||||||||||||||||||    
T  34528762 cggaaccatcgcaaacaatttcgtgccacgtcataggcgatttttctttgttcttctca 34528704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 40353098 - 40353040
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| ||||| |||    
T  40353098 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcgacac 40353040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 49095627 - 49095681
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  49095627 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcg 49095681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 36775739 - 36775702
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgatttta 99  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  36775739 acgcgactttaatcaaaattatttcaaatgcgatttta 36775702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21411260 - 21411200
Alignment:
Q  1 gtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 61  Q
    |||||||||  ||||| ||||||||||| ||||||||||||||| | | ||||||| ||||    
T  21411260 gtctttattcgaatacgcaatttttaattgaaattattcaatacacgactttaatcaaaat 21411200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 3e-76; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 62 - 395
Target Start/End: Original strand, 48271637 - 48271972
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  48271637 acgcgactttaatcgaaattatttcaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 48271736  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  48271737 aaaacaactaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttga 48271836  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaat 357  Q
     ||||||||||||||||| |||||| ||||||||| ||||| |||||||||||| ||| |||||||||             |||||||||||||||||||    
T  48271837 ggaccaaaatagcatgtcatcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc--cttcttttttacggaaccatcacaaacaat 48271934  T
Q  358 ttcgtgtcatgtaataaacaatttttctttgttcttct 395  Q
    |||||||||||| |||  ||||||||||||||||||||    
T  48271935 ttcgtgtcatgtcataggcaatttttctttgttcttct 48271972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 69 - 397
Target Start/End: Complemental strand, 46861410 - 46861079
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn---tccaaaacaat 165  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||| | |||                   |||||||||||    
T  46861410 tttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgtgacacaaaaataaaacataaaaaatccaaaacaat 46861311  T
Q  166 taggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaa 265  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| |||||||    
T  46861310 taggcattaaaagccattacattcattcttcctcgtcatacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttgaggaccaaa 46861211  T
Q  266 atagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaatttcgtgtc 365  Q
    ||||||| ||||||| | ||||||||||||||| |||||||||||| ||| |||||||||             |||||||||||||||||||| | ||||    
T  46861210 atagcatttcctcccactcctcctcaatctcgagtgattgtacaccggcaccttcgaacccttctttttttttcggaaccatcacaaacaattccatgtc 46861111  T
Q  366 atgtaataaacaatttttctttgttcttctca 397  Q
    || | |||| | ||||||||||||||||||||    
T  46861110 atatcataagcgatttttctttgttcttctca 46861079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 155 - 397
Target Start/End: Original strand, 41623164 - 41623404
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||  |||||     
T  41623164 tccaaaacaattaggcattaaaagccattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttgga 41623263  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaac 354  Q
    ||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||  || |||||||||             ||||||||||||||||    
T  41623264 tgaggaccaaaatagcatgtccttccgctcctcctcaacctcgactgattgtacaccgacaccttcgaacc--attctttttttcggaaccatcacaaac 41623361  T
Q  355 aatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||| ||||| |||  | ||||||||||||||||||||    
T  41623362 aatttcgtgccatgtcataggcgatttttctttgttcttctca 41623404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 155 - 311
Target Start/End: Original strand, 42683486 - 42683642
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||  ||||||    
T  42683486 tccaaaacaattaggcattaaaagccattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggt 42683585  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacacc 311  Q
    ||| |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  42683586 tgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacacc 42683642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 17840282 - 17840452
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||||||| || |||||  ||||||    
T  17840282 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctgcggtaccttgttttggt 17840381  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| |||  ||||||||    
T  17840382 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcacattcgaacc 17840452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 69 - 309
Target Start/End: Complemental strand, 36393036 - 36392793
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn---tccaaaacaat 165  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                   |||||||||||    
T  36393036 tttaatcgaaattattacaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataagaaatccaaaacaat 36392937  T
Q  166 taggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaa 265  Q
    |||||||||||||  |||||||| | |||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||  ||||||||| |||||||    
T  36392936 taggcattaaaagaaattacattaattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctgaggcaccttgttttggttgaggaccaaa 36392837  T
Q  266 atagcatgtcctcccgcacctcctcaatctcgactgattgtaca 309  Q
    ||| ||||||||||||| ||||||||| || |||||||||||||    
T  36392836 ataacatgtcctcccgctcctcctcaacctggactgattgtaca 36392793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 9366363 - 9366193
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  9366363 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 9366264  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  9366263 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 9366193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 62 - 325
Target Start/End: Complemental strand, 28978455 - 28978189
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn---tcca 158  Q
    |||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                   ||||    
T  28978455 acgcgactttaaccgaaattatttcaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaatcca 28978356  T
Q  159 aaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgat 258  Q
    ||||||| || ||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||  ||| |||||     
T  28978355 aaacaatcagacattaaaagtctttacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctgtggcgccttgtttttgttgag 28978256  T
Q  259 gaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||||||||| ||||||||||||| ||||||||| ||||| |||||||||||| | | |||||||||    
T  28978255 gaccaaaataacatgtcctcccgctcctcctcaacctcgagtgattgtacaccgggaccttcgaacc 28978189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 34157763 - 34157930
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||||||| || |||||  ||||||    
T  34157763 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcgggttgcccgctacagtccctgtggtaccttgttttggt 34157862  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||   |||||||| ||||| |||||||||||| ||| |||||||||    
T  34157863 tgaggaccgaaatagcatgtcctcccg---ctcctcaacctcgagtgattgtacaccggcaccttcgaacc 34157930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 158 - 397
Target Start/End: Original strand, 34141937 - 34142174
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||| |||||||| ||||||| ||||||||  |||||||||    
T  34141937 aaaacaattaggcattaaaagtcattacattcattcctcctcgtcacacaagtcaatcgggtttcccgctacagtccctgtggcaccttgttttggttga 34142036  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaat 357  Q
     ||||||||||||||||| |||||| ||||||||| ||||| ||||||||| || ||| |||||||||             |||||||||| ||||||||    
T  34142037 ggaccaaaatagcatgtcatcccgctcctcctcaacctcgagtgattgtactccggcaccttcgaacccttcttttttt--cggaaccatcgcaaacaat 34142134  T
Q  358 ttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||| || || |||  | ||||||||||||||||||||    
T  34142135 ttcgtgccacgtcataggcgatttttctttgttcttctca 34142174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 157 - 325
Target Start/End: Complemental strand, 21186418 - 21186250
Alignment:
Q  157 caaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttg 256  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||| |||||||||||| |||||||||||| |||||| |||||||||  ||||||||    
T  21186418 caaaacaattaggcattaaatgtcattacattcattcttcctcgtcacacaagtcaatcgagttgcccgctacagtccctagggcaccttgttttggttg 21186319  T
Q  257 atgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    | |||||||||| ||||||||||||| ||||||||| || || |||||||| ||| ||| |||||||||    
T  21186318 aggaccaaaataacatgtcctcccgctcctcctcaacctggattgattgtataccggcaccttcgaacc 21186250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 20565722 - 20565892
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| || || || ||| ||||||| ||||||| || |||||  ||||||    
T  20565722 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggt 20565821  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  20565822 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 20565892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 40589850 - 40589990
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || ||||||||| |||||||||||||||| || ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| |    
T  40589850 cattcattcatcctcgtcacacaagtcaatcgggtttcctgctacggtccctgcggcaccttgttttggttgatgaccaaaatagcatgtcctcccgctc 40589949  T
Q  285 ctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||||||| ||||| |||||||||||| |||||||||||||    
T  40589950 ctcctcaacctcgagtgattgtacaccggcatcttcgaacc 40589990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 42504501 - 42504331
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||| |||| ||||| || ||| ||||||| ||||||| || |||||| ||||||    
T  42504501 tccaaaacaattaggcattaaaagccattactgtcattcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcggtaccttcttttggt 42504402  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  42504401 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 42504331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 10225153 - 10225323
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||| |||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||||||  || ||| ||||||||  ||||||    
T  10225153 tccaaaataattagacattaaaagccattatattcattcttcctcgtcacacaagtcaatcgggttggccgctacaatctctgaggcaccttgttttggt 10225252  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||  ||||||||||||| ||| ||||| ||||||||| |||||||||||||||||| ||| |||| ||||    
T  10225253 tgagaaccaaaatagcatttccccccgctcctcctcaacctcgactgattgtacaccggcaccttcaaacc 10225323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 397
Target Start/End: Complemental strand, 28113529 - 28113289
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||| |||||||||||||| |||||| ||||  || |||||||||||| | | || | |||||||||||||||| ||||||| ||||||||  ||||||    
T  28113529 tccaacacaattaggcattacaagccactaca--ca-tcttcctcgtcacaaaggttactcgggttgcccgctacagtccctgtggcaccttgttttggt 28113433  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa-ccnnnnnnnnnnnnncggaaccatcacaaa 353  Q
    ||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||||| ||| |||| || ||             |||||||||||||||    
T  28113432 tgaggaccaaaataacatgtcctcccgctcctcctcaacctcgactgattgtacaccggcaccttcaaacccttatttttttttccggaaccatcacaaa 28113333  T
Q  354 caatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||  ||||||||| ||| || ||||||||||||||||||||    
T  28113332 caattatgtgtcatgtcatagacgatttttctttgttcttctca 28113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 48194078 - 48194218
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || ||||||||| ||||||||||| |||| |||||||  ||||||| ||||||||  ||||||||| |||||||||||||||||||||||| |    
T  48194078 cattcattcatcctcgtcacacaagtcaatcaggtttcccgctatagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 48194177  T
Q  285 ctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||||||| ||||| |||||||||||||||| |||||||||    
T  48194178 ctcctcaacctcgagtgattgtacaccagcaccttcgaacc 48194218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 185 - 325
Target Start/End: Complemental strand, 45362389 - 45362249
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || ||||||||| ||||||||||||| || || ||||| |||| || ||||||||| ||||||||| |||||||||||||||||||||||| |    
T  45362389 cattcattcatcctcgtcacacaagtcaatcggatttcctgctacagtccttgcggcaccttcttttggttgaggaccaaaatagcatgtcctcccgctc 45362290  T
Q  285 ctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||||||| ||||| |||||||||||| ||| |||||||||    
T  45362289 ctcctcaacctcgagtgattgtacaccggcaccttcgaacc 45362249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 4230553 - 4230724
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||| ||||| ||||||||||| ||| ||   |||||||||| |||||||||| |||||| || | || ||||||||||||||| | |||    
T  4230553 tccaaaacaattagacattacaagccattacaatcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgacagtccctggggcacctgctttt 4230652  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    |||||| || ||||||||||||||||||||| ||||||| | || || |||||||||||| ||| |||||||    
T  4230653 ggttgaggatcaaaatagcatgtcctcccgctcctcctccacctggaatgattgtacaccggcaccttcgaa 4230724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 320
Target Start/End: Complemental strand, 1641811 - 1641643
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||||||||| || |||||||||||| ||   |||||||||| |||||||||  || ||| || |  | || |||||||||||||| |||    
T  1641811 tccaaaacaattaggcattacaatccattacattcaatcatcttcctcgtcacacaagtcaactggattgtcctcgccagttcctggggcaccttctttt 1641712  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    |||||| |||||||||| ||||||||||||| ||||||||| ||||  |||||||||||| ||| ||||    
T  1641711 ggttgaggaccaaaataacatgtcctcccgctcctcctcaacctcgtttgattgtacaccggcaccttc 1641643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 15900529 - 15900364
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||| |||||||||||||| |||||| |||||    |||||||||||| ||| || |||||||||| || | || ||||||||||||||| | ||||      
T  15900529 tccaacacaattaggcattacaagccactacata---tcttcctcgtcacacaggttaatcgggttgtcctcgacagtccctggggcacctgcttttgac 15900433  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    ||| |||||||||||||| ||||||| | ||||||||  |||||||||||||||||||||| |||||||    
T  15900432 tgaggaccaaaatagcatatcctcccactcctcctcagcctcgactgattgtacaccagcaccttcgaa 15900364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 43350521 - 43350358
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||||| ||| |||||||||| |||||| || | || ||||||||||||||| | |||    
T  43350521 tccaaaacaattagatattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctgctttt 43350422  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagca 315  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||| | ||||| ||||||||||    
T  43350421 ggttgaagaccaaaatagcatgtcctcccgctcctcctcaacctcaaatgattatacaccagca 43350358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 22291926 - 22292089
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   |||||| ||| ||||||||||  ||||| || | || ||||||||||||||| | |||    
T  22291926 tccaaaacaattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattaggttgtcctcgacagtccctggggcacctgctttt 22292025  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagca 315  Q
    || | | |||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||    
T  22292026 ggctcaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagca 22292089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 42736071 - 42736238
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||||| ||| |||||||||| |||||| || | || ||||||||| ||||| | |||    
T  42736071 tccaaaacaattagatattataactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggg-cacctgctttt 42736169  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    || ||| |||||||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||||||||    
T  42736170 ggctgaggaccaaaatagcatgttctcccgctcctcctcaacctcgaatgattatacaccagcatcttc 42736238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 198 - 298
Target Start/End: Complemental strand, 20877107 - 20877007
Alignment:
Q  198 tcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcg 297  Q
    |||||| |||| |||||||||||| || | || ||||||||||||||| | ||||||||| |||||||||||||||||||||||| |||||| || ||||    
T  20877107 tcgtcacacaattcaatcgggttgtcctcgacagtccctggggcacctgcttttggttgaggaccaaaatagcatgtcctcccgctcctcctaaacctcg 20877008  T
Q  298 a 298  Q
    |    
T  20877007 a 20877007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 41623067 - 41623133
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||||    
T  41623067 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgttaaacaaaatg 41623133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 42683389 - 42683455
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||| |||||||    
T  42683389 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaacataatgtcaaacaaaatg 42683455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 48193962 - 48194028
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| ||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  48193962 acgcgactttgatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 48194028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 21186510 - 21186441
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||||||||| ||||||| ||||| |||    
T  21186510 tttaatcgaaattattccaaatgcgattttattctaagtactataatgtcaaacaaaatgtgcgcgacac 21186441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 30354057 - 30353998
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||||||||| |||||||    
T  30354057 tttaatcgaaattattccaaatgtgattttattctaagtaccataatgtcaaacaaaatg 30353998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 34141837 - 34141900
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaa 125  Q
    |||||| |||||||||||||||| ||||||||||| |||| |||||||||||||||||| ||||    
T  34141837 acgcgactttaatcgaaattattccaaatgcgattgtattataagtaccataatgtcaaacaaa 34141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 40589515 - 40589574
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  40589515 tttaatcggaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 40589574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 17184280 - 17184450
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||| | ||| |||||||||| |||||| || | ||  ||| |||||||||| | |||    
T  17184280 tccaaaacaattagatattacaacacattacattcaatcatcttccgcatcacacaagtcaattgggttgtcctcgacaatccatggggcacctgctttt 17184379  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || | | ||| || ||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  17184380 ggctaaggac-aatatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 17184450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1641960 - 1641900
Alignment:
Q  1 gtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 61  Q
    |||||||||  ||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  1641960 gtctttattcgaatacgcaatttttaatagaaattattcaatacgcaactttaatcgaaat 1641900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 3380101 - 3380031
Alignment:
Q  239 ggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtaca 309  Q
    ||||||| | ||||||||| |||||||||||||||||||||||| |||||||| ||| |||| ||| ||||    
T  3380101 ggcacctgcttttggttgaggaccaaaatagcatgtcctcccgctcctcctcagtctggactaattataca 3380031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 17840203 - 17840257
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  17840203 ttattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcg 17840257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 34157684 - 34157738
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  34157684 ttattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcg 34157738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 45362505 - 45362439
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| ||||||||||||| || |||||||||||||||| ||| ||||||||||| || |||||||    
T  45362505 acgcgactttaatcgaaattcttccaaatgcgattttattctaaataccataatgtgaaacaaaatg 45362439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 21186229 - 21186173
Alignment:
Q  341 gaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||||||||||||  ||||||||| |||  ||||||||||||||||||||||    
T  21186229 gaaccatcacaaacaattctgtgtcatgtcatatgcaatttttctttgttcttctca 21186173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 4230445 - 4230511
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||||||||||||| |  | | |||| ||||||  |||||||||||||||||||||||||    
T  4230445 acgcgattttaatcgaaattactcaatacgcgactttattcaaagtaccataatgtcaagcaaaatg 4230511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 13921199 - 13921253
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| |||||||||||||||||| ||||||| |||||    
T  13921199 ttattccaaatgcaattttattctaagtaccataatgtcaaccaaaatgtgcgcg 13921253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 20565643 - 20565697
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| |||||||||||||||||| ||||||| |||||    
T  20565643 ttattccaaatgcaattttattctaagtaccataatgtcaaacaaaatgtgcgcg 20565697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 36392757 - 36392699
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||||||||||||||  ||||||||| |||  | ||||||||||||||||||||    
T  36392757 cggaaccatcacaaacaattatgtgtcatgtcataggcgatttttctttgttcttctca 36392699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 48194233 - 48194288
Alignment:
Q  342 aaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||| |||||||||||||||||||| |||  | |||||| |||||||||||||    
T  48194233 aaccatcgcaaacaatttcgtgtcatgtcataggcgatttttatttgttcttctca 48194288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 9366442 - 9366384
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| ||||| |||    
T  9366442 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcgacac 9366384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 28978177 - 28978119
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||||||||||||| |||| || || |||  | ||||||||||||||||||||    
T  28978177 cggaaccatcacaaacaattccgtgccacgtcatatgcgatttttctttgttcttctca 28978119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 1641921 - 1641852
Alignment:
Q  59 aatacgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||| | ||||||||||||||||  ||| | |||||||||  |||||||||||| || |||||||||    
T  1641921 aatacgcaactttaatcgaaattattcaaaacgtgattttattcaaagtaccataatatctagcaaaatg 1641852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 42735950 - 42735987
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgatttta 99  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  42735950 acgcgactttaatcgaaattattccaaatgcgatttta 42735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 397
Target Start/End: Original strand, 10225340 - 10225396
Alignment:
Q  341 gaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||||||||||| |||| ||| | |||  | ||||||||||||||||||||    
T  10225340 gaaccatcacaaacaattccgtgccatatcataggcgatttttctttgttcttctca 10225396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 20877251 - 20877187
Alignment:
Q  64 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||| |||||||||  |||||||| ||||||  ||||||||  | |||||||||||||    
T  20877251 gcgattttaattgaaattattcaaaatgcgaatttattcaaagtaccaataagtcaagcaaaatg 20877187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 40589609 - 40589641
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattca 190  Q
    ||||||||||||||||||||| |||||||||||    
T  40589609 aaaacaattaggcattaaaagtcattacattca 40589641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 28167876 - 28168046
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||  ||||||    
T  28167876 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggt 28167975  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||  || |||||||||    
T  28167976 tgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccgacaccttcgaacc 28168046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 62 - 397
Target Start/End: Complemental strand, 18439522 - 18439185
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  18439522 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacgaaaataaaacataaaaaaatcc 18439423  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| ||| | || |||||| |||||||||  |||||||||    
T  18439422 aaaacaattaggcattaaaagccattacattcattcttcctcgtcacaaaagtcaatcgggtttcccacaactgtccctagggcaccttgttttggttga 18439323  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaat 357  Q
     |||||||||||||||||||||||| ||||||||| || || |||||||||| | ||| |||| ||||             |||||||||||||||||||    
T  18439322 ggaccaaaatagcatgtcctcccgctcctcctcaacctggattgattgtacatcggcaccttcaaacc--cttctttttttcggaaccatcacaaacaat 18439225  T
Q  358 ttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    | |||||||||| |||  | ||||||||||||||||||||    
T  18439224 tacgtgtcatgtcataggcgatttttctttgttcttctca 18439185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 484500 - 484330
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  484500 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 484401  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  484400 tgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 484330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 62 - 325
Target Start/End: Complemental strand, 41856221 - 41855954
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac----nnnnnnnnnnnnnnnntcc 157  Q
    |||||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||||  |||||| ||||| |||                    |||    
T  41856221 acgcgactttaattgaaatgatttcaaatgcgattttattctaagtaccataatgtcaaaaaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 41856122  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||||||||||||||||||| |||||||||||| ||||||| |||| |||| |||||||||||||||||||| ||||||||||||||||  ||||||| |    
T  41856121 aaaacaattaggcattaaaaaccattacattcattcttccttgtcacacaaatcaatcgggttgcccgctacagtccctggggcaccttgttttggttaa 41856022  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
      ||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  41856021 gaaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 41855954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 158 - 325
Target Start/End: Original strand, 41276151 - 41276318
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||||||||||||||||||||||| |||||||| || ||||||||| |||||||||||||||| |||||||| ||||||| ||||||||  |||||||||    
T  41276151 aaaacaattaggcattaaaagccactacattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccttgttttggttga 41276250  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||| ||| |||||||||    
T  41276251 ggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattatacaccggcaccttcgaacc 41276318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 158 - 325
Target Start/End: Original strand, 24862422 - 24862589
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| ||||||||| |||||| |||||||| ||||||  ||||||||  |||||||||    
T  24862422 aaaacaattaggcattaaaagccattacattcattcatcctcgtcacacaagtcaaacgggtttcccgctacagtccctacggcaccttgttttggttga 24862521  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||||||| | ||||||||| ||||| |||||||| ||||||| |||||||||    
T  24862522 ggaccaaaatagcatgtcctcccactcctcctcaacctcgagtgattgtataccagcaccttcgaacc 24862589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 155 - 322
Target Start/End: Original strand, 42604524 - 42604691
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| ||   ||||||||||||||||  ||||||    
T  42604524 tccaaaataattaggcattaaaaaccattacattcattcttcctcgtcacacaagtcaatcgggttgcccactggagtccctggggcaccttgttttggt 42604623  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcga 322  Q
    ||| || | ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| ||||||    
T  42604624 tgaggatcgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcga 42604691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 325
Target Start/End: Complemental strand, 15031564 - 15031397
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  |||||||||    
T  15031564 aaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttga 15031465  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||| ||||||||| ||||||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  15031464 ggaccgaaatagcatatcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 15031397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 41017096 - 41016926
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||| |||| |||||||||||||||||||| ||||||| || |||||  ||||||    
T  41017096 tccaaaacaattaggcattaaaagtcattacattcattcttcttcgtcacacaaatcaatcgggttgcccgctacagtccctgtggtaccttgttttggt 41016997  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| |||||||||||||||| || | ||||||| ||||  |||||||||||| ||| |||||||||    
T  41016996 tgaggaccgaaatagcatgtcctcctgctcatcctcaacctcgtgtgattgtacaccggcaccttcgaacc 41016926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 45065750 - 45065920
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||| ||| ||||||| |||| || || |||||  ||||||    
T  45065750 tccaaaacaattaggcattaaaagtcattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccatgcggtaccttgttttggt 45065849  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| |||||||||||||| |||| ||||| ||| ||||| |||||||||||  ||| |||||||||    
T  45065850 tgaggaccgaaatagcatgtccttccgctcctccccaacctcgagtgattgtacactggcaccttcgaacc 45065920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 157 - 324
Target Start/End: Original strand, 40703436 - 40703603
Alignment:
Q  157 caaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttg 256  Q
    ||||| ||||||||||||||| |||||||||| | |||||||||||| |||||||||||||||||| | |||| ||||||||||||||||  ||||||||    
T  40703436 caaaataattaggcattaaaaaccattacattaattcttcctcgtcacacaagtcaatcgggttgcacactacagtccctggggcaccttgttttggttg 40703535  T
Q  257 atgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaac 324  Q
    | || | |||||||||||||||  || ||||||||| ||| | ||||||||||||  || ||||||||    
T  40703536 aggatcgaaatagcatgtcctcttgctcctcctcaacctctagtgattgtacaccgacaccttcgaac 40703603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 185 - 325
Target Start/End: Original strand, 44051535 - 44051675
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || ||||||||| |||||||||||||||| |||||||| ||||||  |||||| || |||| |||| |||||||||||||||||||||||| |    
T  44051535 cattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctacggcaccctcttttgattgaggaccaaaatagcatgtcctcccgctc 44051634  T
Q  285 ctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    || ||||| ||||| |||||||||||| |||  ||||||||    
T  44051635 cttctcaacctcgagtgattgtacaccggcactttcgaacc 44051675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 195 - 292
Target Start/End: Original strand, 22550179 - 22550276
Alignment:
Q  195 tcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaa 292  Q
    ||||||||| |||||||||||||||| |||||||| ||||||| ||||||||  ||||||||| |||||||||||||||||||||||| |||||||||    
T  22550179 tcctcgtcacacaagtcaatcgggtttcccgctactgtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaa 22550276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 26487536 - 26487707
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcat---acaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| || || || ||||   |||||||||| |||||| |    || ||||||||||||||| | |||    
T  26487536 tccaaaacaattagatattacaacccattacattcaatcatcttcctcatgacacaagtcaattgggttgtcattgacagtccctggggcacctgctttt 26487635  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  26487636 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 26487707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 323
Target Start/End: Complemental strand, 38032994 - 38032863
Alignment:
Q  192 tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||||| ||| |||||||||| |||||| || | || ||||| ||| ||||| | ||||| ||| |||||||||||||||||||||||| |||||| |    
T  38032994 tcttcctcatcacacaagtcaattgggttgtcctcgacagtccccgggacacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctta 38032895  T
Q  292 atctcgactgattgtacaccagcatcttcgaa 323  Q
    | ||||| ||||| |||||||||| |||||||    
T  38032894 acctcgaatgattatacaccagcaccttcgaa 38032863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 22550053 - 22550119
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  22550053 acgcgagtttaatcgaaattatttcaaatgcgattttattctaagtaccataatgtcaaacaaaatg 22550119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 41276046 - 41276112
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  41276046 acgcgactttaatcgaaattatttcaaatgcgattttattctaagtaccataatgtcaaacaaaatg 41276112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 42168066 - 42167903
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||||| ||| |||||||||| |||||| || | || ||||| ||||||||| | |||    
T  42168066 tccaaaacaattagatattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccccggggcacctgctttt 42167967  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagca 315  Q
    || ||| |||||||||||||||||||||||| ||||||||| || ||  |||| ||||||||||    
T  42167966 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaaccttgaacgattatacaccagca 42167903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 40703337 - 40703403
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  40703337 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 40703403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 24862322 - 24862388
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| ||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  24862322 acgcgactttcatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 24862388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 44051419 - 44051485
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| ||||||||||| |||||||||||| |||||||| |||||||||||||||||| |||||||    
T  44051419 acgcgactttaatcgaaactatttcaaatgcaattttattctaagtaccataatgtcaaacaaaatg 44051485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 28168068 - 28168126
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||||||||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  28168068 cggaaccatcacaaacaatttcgtgccatgtcataggcaatttttctttgttcttctca 28168126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 41017175 - 41017121
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  41017175 ttattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcg 41017121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 42604427 - 42604485
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaa 120  Q
    |||||| |||||||||||||||| ||||| ||||||||||  |||||||||||||||||    
T  42604427 acgcgactttaatcgaaattattccaaatacgattttattccaagtaccataatgtcaa 42604485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 19241741 - 19241648
Alignment:
Q  198 tcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||| ||||||||||||||||| ||   || |||||||||||| || | ||||| ||| ||| ||||||| |||||||||||| ||||||||    
T  19241741 tcgtcacacaagtcaatcgggttgtccttgacagtccctggggcaactgcttttgggtgaggacaaaaatagtatgtcctcccgctcctcctca 19241648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 19314925 - 19314832
Alignment:
Q  198 tcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||| ||||||||||||||||| ||   || |||||||||||| || | ||||| ||| ||| ||||||| |||||||||||| ||||||||    
T  19314925 tcgtcacacaagtcaatcgggttgtccttgacagtccctggggcaactgcttttgggtgaggacaaaaatagtatgtcctcccgctcctcctca 19314832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 38872415 - 38872470
Alignment:
Q  342 aaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||||||||||||||| ||||| |||  | ||||||||||||||||||||    
T  38872415 aaccatcacaaacaatttcgtgccatgtcataggcgatttttctttgttcttctca 38872470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 15031646 - 15031588
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| |||||||||||||||||| ||||||| ||||| |||    
T  15031646 ttattccaaatgcaattttattctaagtaccataatgtcaaacaaaatgtgcgcgacac 15031588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 484580 - 484522
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| ||||| |||    
T  484580 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcgacac 484522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 45065671 - 45065725
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  45065671 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcg 45065725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 42168189 - 42168152
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgatttta 99  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  42168189 acgcgactttaatcgaaattattccaaatgcgatttta 42168152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 26487456 - 26487520
Alignment:
Q  64 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||| |||||||||| ||| || | ||||||  ||||||||  |||||||||||||||    
T  26487456 gcgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagcaaaatg 26487520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 38033116 - 38033052
Alignment:
Q  64 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||| |||||||||  ||| |||| ||||||  ||||||||  |||||||||||||||    
T  38033116 gcgattttaattgaaattattcaaaaagcgaatttattcaaagtaccaatatgtcaagcaaaatg 38033052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 62 - 397
Target Start/End: Original strand, 16582791 - 16583130
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  16582791 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 16582890  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| |||| |||||| |||||||||  ||| |||||    
T  16582891 aaaacaattatgcattaaaagtcattacattcattcttcctcgtcacacaagtcaatcgggttgccctctacagtccctagggcaccttgtttttgttga 16582990  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaat 357  Q
     |||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||             |||||||||||||||||||    
T  16582991 ggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacccttctttttttttcggaaccatcacaaacaat 16583090  T
Q  358 ttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    || ||| || || ||| || ||||||||||||||||||||    
T  16583091 tttgtgccacgtcatagacgatttttctttgttcttctca 16583130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 155 - 397
Target Start/End: Complemental strand, 19470747 - 19470507
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||| |||||||||  ||||||    
T  19470747 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctagggcaccttgttttggt 19470648  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaac 354  Q
    ||| |||||||||||||||||||||||| ||||||||| || |||||||||||||||   | |||||||||             ||||||||||||||||    
T  19470647 tgaggaccaaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccgagaccttcgaacc--cttctttttttcggaaccatcacaaac 19470550  T
Q  355 aatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||  ||||||||| ||| || |||||||||| |||||||||    
T  19470549 aattatgtgtcatgtcatagacgatttttctttattcttctca 19470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 2918490 - 2918320
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||| |||| |||| |||||||||||  ||||||    
T  2918490 tccaaaacaattaggcattaaaagtcattacattcattcttcctcgtcacacaagtcaaccgggttgcccactacagtccatggggcaccttgttttggt 2918391  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||| ||| |||||||||    
T  2918390 tgaggaccaaaatagcatgtcctcctgctcctcctcaacctcgactgattgtacaccggcaccttcgaacc 2918320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 62 - 325
Target Start/End: Original strand, 23408702 - 23408969
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac----nnnnnnnnnnnnnnnntcc 157  Q
    |||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||||| | ||| |||                    |||    
T  23408702 acgcgactttaattgaaattatttaaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgagcgacacaaaaataaaacataaaaaaatcc 23408801  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||| |||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||||||||||  ||||||||| |||||  |||||||||    
T  23408802 aaaataattaggcattaaaagtcattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacaatccctggggtaccttgatttggttga 23408901  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||    
T  23408902 ggaccaaaatagcatgtcctcccgctcctcctcaaactcgactgattgtacaccggcaccttcgaacc 23408969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 155 - 397
Target Start/End: Original strand, 23408799 - 23409040
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||||||||||  ||||||||| |||||  ||||||    
T  23408799 tccaaaataattaggcattaaaagtcattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacaatccctggggtaccttgatttggt 23408898  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaac 354  Q
    ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||             | ||||||||||||||    
T  23408899 tgaggaccaaaatagcatgtcctcccgctcctcctcaaactcgactgattgtacaccggcaccttcgaacccttctttttttt-cagaaccatcacaaac 23408997  T
Q  355 aatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||  ||||||||| |||  | ||||||||||||||||||||    
T  23408998 aattctgtgtcatgtcataggcgatttttctttgttcttctca 23409040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 155 - 397
Target Start/End: Original strand, 35492611 - 35492854
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||||||||||||||||  ||||||    
T  35492611 tccaaaacaattaggcattaaaa-ccattacattcattcttcctcgtcacacaagtcaatcgggttgcccactacagtccctggggcaccttgttttggt 35492709  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnn--cggaaccatcacaa 352  Q
    ||| |||||||||||||||||||||||| ||||||||| ||||| | |||||||||| ||| |||||||||               ||||||||||||||    
T  35492710 tgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtaattgtacaccggcaccttcgaaccttttttttttcttttcggaaccatcacaa 35492809  T
Q  353 acaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||| ||| || || ||| || ||||||||||||||||||||    
T  35492810 acaattttgtgccacgtcatagacgatttttctttgttcttctca 35492854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 62 - 325
Target Start/End: Original strand, 43492441 - 43492708
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  43492441 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 43492540  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||| ||| ||| ||||||||||||  |||||||||    
T  43492541 aaaacaattaggcattaaaagtcattacattcattcttcctcgtcacacaagtcaatcgggttgtccgttacagtcactggggcaccttgttttggttga 43492640  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||||||| | |||| |||| || ||||||||||||||| ||| |||||||||    
T  43492641 ggaccaaaatagcatgtcctcccactcctcgtcaacctggactgattgtacaccggcaccttcgaacc 43492708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 62 - 397
Target Start/End: Complemental strand, 40676641 - 40676300
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac----nnnnnnnnnnnnnnnntcc 157  Q
    |||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||||  |||||| ||||| |||                    |||    
T  40676641 acgcgactttaatcgaaattattccaaatgcggttttattctaagtaccataatgtcaaataaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 40676542  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||| ||||| |||| |||||||||||  |||| || |    
T  40676541 aaaacaattaggcattaaaagccattacattcattcttcctagtcacacaagtgaatcgggttgcctgctacagtccatggggcaccttgttttgattaa 40676442  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa--ccnnnnnnnnnnnnncggaaccatcacaaaca 355  Q
     ||| |||||||||||||||||||| ||||||||| || ||||||||||||||| ||| |||||||  |              |||||||||||||||||    
T  40676441 ggacgaaaatagcatgtcctcccgctcctcctcaaccttgactgattgtacaccggcaccttcgaatccttttttttcttttccggaaccatcacaaaca 40676342  T
Q  356 atttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||||||| |||  ||||||||||||||||||||||    
T  40676341 atttcgtgtcatgtcataggcaatttttctttgttcttctca 40676300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 155 - 397
Target Start/End: Complemental strand, 41498244 - 41498004
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||| ||||||||||| |||| || |||| ||||||||||||||||| ||||||| ||||||||||||||||  ||||||    
T  41498244 tccaaaacaattaggcattaaaagtcattacattcattcttacttgtcacacaagtcaatcgggttggccgctacagtccctggggcaccttgttttggt 41498145  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaac 354  Q
    ||| |||| ||||||||||||||||||| ||||||||| || ||||||||||||||| ||| |||||||||             ||||||||||||||||    
T  41498144 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctggactgattgtacaccggcaccttcgaacctttcatttttt--cggaaccatcacaaac 41498047  T
Q  355 aatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||  ||| ||||| |||  | ||||||||||||||||||||    
T  41498046 aattatgtgccatgtcataggcgatttttctttgttcttctca 41498004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 74 - 325
Target Start/End: Complemental strand, 41498329 - 41498074
Alignment:
Q  74 tcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac----nnnnnnnnnnnnnnnntccaaaacaattagg 169  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| ||||| |||                    |||||||||||||||    
T  41498329 tcgaaattatttcaaatgcgattttattctaagtaccatcatgtcaaacaaaatgtgcgcgacacgaaaataaaacataaaaaaatccaaaacaattagg 41498230  T
Q  170 cattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatag 269  Q
    ||||||||| ||||||||||| |||| || |||| ||||||||||||||||| ||||||| ||||||||||||||||  ||||||||| |||| ||||||    
T  41498229 cattaaaagtcattacattcattcttacttgtcacacaagtcaatcgggttggccgctacagtccctggggcaccttgttttggttgaggaccgaaatag 41498130  T
Q  270 catgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||||||||||||| ||||||||| || ||||||||||||||| ||| |||||||||    
T  41498129 catgtcctcccgctcctcctcaacctggactgattgtacaccggcaccttcgaacc 41498074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 43983690 - 43983860
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  43983690 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 43983789  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  43983790 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 43983860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 3936547 - 3936377
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  3936547 tccaaaataattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 3936448  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  3936447 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 3936377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 157 - 325
Target Start/End: Original strand, 22002792 - 22002960
Alignment:
Q  157 caaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttg 256  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||||    
T  22002792 caaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggttg 22002891  T
Q  257 atgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    | |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  22002892 aggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 22002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 28476470 - 28476640
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| || ||| ||||||| ||||||| || |||||  ||||||    
T  28476470 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcggtaccttgttttggt 28476569  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  28476570 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 28476640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 17425754 - 17425924
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| || || || ||| ||||||| ||||||| || |||||  ||||||    
T  17425754 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcgattggcttgtccgctacagtccctgcggtaccttgttttggt 17425853  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||  ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  17425854 tgaggactgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 17425924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 33404831 - 33404994
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcag---tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||| |||| |||||| ||||||||    |||||||| ||| |||||||||||||||||||| | || ||||||||||||||| | |||    
T  33404831 tccaaaacaattaggtattacaagccactacattcaagcatcttcctcctcacacaagtcaatcgggttgccctcgacagtccctggggcacctactttt 33404930  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagca 315  Q
    |||||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  33404931 ggttgaggaccaaaatagcatgtcctaccgctcctcctcaacctcgactgattgtacaccagca 33404994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 39799111 - 39798941
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| | ||| ||||||| || |||| || |||||  ||||||    
T  39799111 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatctgcttgtccgctacagttcctgcggtaccttgttttggt 39799012  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| | ||| |||||||||||  ||| |||||||||    
T  39799011 tgaggaccgaaatagcatgtcctcccgctcctcctcaaccgcgagtgattgtacactggcaccttcgaacc 39798941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 6977912 - 6978083
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||| ||| ||   |||||| ||| |||| ||||| |||||| || | || |||||| |||||||| | |||    
T  6977912 tccaaaacaattagatattagaacccattacactcaatcatcttcctcatcacacaaatcaattgggttgtcctcgacagtcccttgggcacctgctttt 6978011  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  6978012 ggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 6978083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 3942507 - 3942635
Alignment:
Q  197 ctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctc 296  Q
    ||||||| |||||||||||||||| |||||||| |||| ||  |||||||  ||| ||||| |||||||||||||| ||||||||| ||||||||| |||    
T  3942507 ctcgtcacacaagtcaatcgggtttcccgctacagtccatgccgcaccttgttttagttgaggaccaaaatagcatatcctcccgctcctcctcaacctc 3942606  T
Q  297 gactgattgtacaccagcatcttcgaacc 325  Q
     | |||||||||||| ||| |||||||||    
T  3942607 aagtgattgtacaccggcaccttcgaacc 3942635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 323
Target Start/End: Complemental strand, 34520805 - 34520674
Alignment:
Q  192 tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||||| ||| |||||||||| ||| || || | ||||||||| |||||||| | ||||| ||| |||||||||||||||||||||||| ||||||||    
T  34520805 tcttcctcatcacacaagtcaattgggatgtcctcgacggtccctcgggcacctgcttttggctgaagaccaaaatagcatgtcctcccgctcctcctca 34520706  T
Q  292 atctcgactgattgtacaccagcatcttcgaa 323  Q
    | ||||| ||||| ||||||| || |||||||    
T  34520705 acctcgaatgattatacaccaacaccttcgaa 34520674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 323
Target Start/End: Complemental strand, 15891098 - 15890930
Alignment:
Q  157 caaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttgg 253  Q
    |||||||||||  ||||| || |||||||||||| ||   |||||| ||| |||||||||| |||||| |  | || ||||||||||||||| | |||||    
T  15891098 caaaacaattaaacattacaaaccattacattcaatcatcttcctcatcacacaagtcaattgggttgtct-cgacagtccctggggcacctgcttttgg 15891000  T
Q  254 ttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    |||| ||||||||||||||||||| |||| ||||||||| ||  | ||||||||||||| || |||||||    
T  15890999 ttgaggaccaaaatagcatgtccttccgctcctcctcaacctaaaatgattgtacaccaacaccttcgaa 15890930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 320
Target Start/End: Complemental strand, 37311717 - 37311602
Alignment:
Q  205 acaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgatt 304  Q
    ||||||||||||||||| || | || ||||||||||||||| | ||||| ||| || ||||||||||||||||||||| |||| |||| ||||| |||||    
T  37311717 acaagtcaatcgggttgtcctcgacagtccctggggcacctacttttggctgaggatcaaaatagcatgtcctcccgctcctcatcaacctcgaatgatt 37311618  T
Q  305 gtacaccagcatcttc 320  Q
     |||||||||| ||||    
T  37311617 atacaccagcaccttc 37311602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 5421218 - 5421389
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||| |  ||||||| |||||||||||| ||   |||||| ||| |||||||||| |||||| || | |  ||||||||||||||| | |||    
T  5421218 tccaaaacaattggatattaaaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgagagtccctggggcacctgctttt 5421317  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||||||||||||||| || |||| ||||||||| ||| | ||||| | |||||||| |||||||    
T  5421318 ggctgaggaccaaaatagcatgttctgccgctcctcctcaacctcaaatgattatgcaccagcaccttcgaa 5421389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 310
Target Start/End: Complemental strand, 16413362 - 16413245
Alignment:
Q  192 tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||||||||| ||||||||||||||||| || |  | |||||||  |||||| | ||||||||| |||||||||| |||||| |||||| ||||||||    
T  16413362 tcttcctcgtcacacaagtcaatcgggttgtcctcgccagtccctgcagcacctgcttttggttga-gaccaaaataacatgtcttcccgctcctcctca 16413264  T
Q  292 atctcgactgattgtacac 310  Q
    | ||||| |||||||||||    
T  16413263 acctcgaatgattgtacac 16413245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 192 - 320
Target Start/End: Complemental strand, 17537998 - 17537870
Alignment:
Q  192 tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||||| ||| |||||||||| |||||| || | || |||  |||| |||||   ||||| ||| |||||||||||||||||||||||| ||||||||    
T  17537998 tcttcctcatcacacaagtcaattgggttgtcctcgacagtctatgggacacctgtttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 17537899  T
Q  292 atctcgactgattgtacaccagcatcttc 320  Q
    | ||||| ||||| |||||||||| ||||    
T  17537898 acctcgaatgattatacaccagcaccttc 17537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 2918588 - 2918530
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaa 120  Q
    |||||| |||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  2918588 acgcgactttaatcgaaattattccaaatgcgattttgttctaagtaccataatgtcaa 2918530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 312
Target Start/End: Complemental strand, 24107894 - 24107738
Alignment:
Q  159 aaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggtt 255  Q
    ||||||||||  |||| || |||||||||||| ||   |||||  ||| |||||||||| |||||| || | || |||| | || ||||| | ||||| |    
T  24107894 aaacaattagatattacaacccattacattcaatcatcttccttctcacacaagtcaattgggttgtcctcaacagtccataggacacctgcttttggct 24107795  T
Q  256 gatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacacca 312  Q
    || |||||||||||||| ||||| ||| ||||||||| ||||| ||||| |||||||    
T  24107794 gaggaccaaaatagcatttcctctcgctcctcctcaacctcgaatgattatacacca 24107738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 19470844 - 19470779
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaat 127  Q
    |||||| ||||||| ||||||||  ||||||| ||||||| |||||||||||||||||| ||||||    
T  19470844 acgcgactttaatcaaaattattctaaatgcggttttattctaagtaccataatgtcaaacaaaat 19470779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 325
Target Start/End: Complemental strand, 23786806 - 23786743
Alignment:
Q  262 caaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||||||||||||| |||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  23786806 caaaatagcatgtcatcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 23786743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 3942383 - 3942445
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||    ||||||||| |||||||||||||||||| |||||||    
T  3942383 acgcgactttaatcgaaattattccaa----gattttattctaagtaccataatgtcaaacaaaatg 3942445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 35492563 - 35492599
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaa 105  Q
    |||||||||||||||| ||||||||||||||||||||    
T  35492563 tttaatcgaaattattccaaatgcgattttattttaa 35492599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 17425675 - 17425729
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  17425675 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcg 17425729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 28476391 - 28476445
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  28476391 ttattccaaatgcaattttattctaactaccataatgtcaaacaaaatgtgcgcg 28476445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 29073939 - 29073993
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| ||||| || |||||||||||||||||| ||||||| |||||    
T  29073939 ttattccaaatgcaattttgttctaagtaccataatgtcaaacaaaatgtgcgcg 29073993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 43983611 - 43983665
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  43983611 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcg 43983665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 17538163 - 17538126
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgatttta 99  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  17538163 acgcgactttaatcgaaattattccaaatgcgatttta 17538126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 24108017 - 24107980
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgatttta 99  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  24108017 acgcgactttaatcgaaattattccaaatgcgatttta 24107980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 396
Target Start/End: Original strand, 43492720 - 43492777
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctc 396  Q
    ||||||||||||||||||||  ||| ||||| |||  | |||||||||||||||||||    
T  43492720 cggaaccatcacaaacaattatgtgccatgtcataggcgatttttctttgttcttctc 43492777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 17538134 - 17538070
Alignment:
Q  64 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||| |||||||||  ||| |||| ||||||  ||||||||  |||||||||||||||    
T  17538134 gcgattttaattgaaattattcaaaacgcgaatttattcaaagtaccaatatgtcaagcaaaatg 17538070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 24107988 - 24107924
Alignment:
Q  64 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||| |||||||||  ||| |||| ||||||  ||||||||  |||||||||||||||    
T  24107988 gcgattttaattgaaattattcaaaacgcgaatttattcaaagtaccaatatgtcaagcaaaatg 24107924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 4e-63; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 62 - 397
Target Start/End: Complemental strand, 13895125 - 13894791
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn--tccaa 159  Q
    |||||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                  |||||    
T  13895125 acgcgactttaatcgaaattattctaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacaaaaaattccaa 13895026  T
Q  160 aacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatg 259  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||||  |||||||||||||||  ||| ||||| |    
T  13895025 aacaattaggcattaaaagccattacattcattcttccttgtcacacaagtcaatcgggttgccc-ctacaatccctggggcaccttgtttttgttgagg 13894927  T
Q  260 accaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaattt 359  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||             |||||||||||||||||||||    
T  13894926 accaaaatagcatgtcctcccgctcctcctcaacctcgaatgattgtacaccggcaccttcgaacc--cttctttttttcggaaccatcacaaacaattt 13894829  T
Q  360 cgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||| || || ||| || ||||||||||||||||||||    
T  13894828 cgtgccacgtcatagacgatttttctttgttcttctca 13894791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 62 - 325
Target Start/End: Original strand, 2429463 - 2429730
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| | |||                    | |    
T  2429463 acgcgactttaatcgaaattatttcaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgtgacacgaaaataaaacataaaaaaattc 2429562  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||  |||||||||    
T  2429563 aaaataattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctatagtccctggggcaccttgttttggttga 2429662  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     ||||||||||||||||| |||||| ||| ||||| ||||| |||||||||||| ||| |||||||||    
T  2429663 ggaccaaaatagcatgtcttcccgctcctgctcaacctcgagtgattgtacaccggcaccttcgaacc 2429730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 45099595 - 45099425
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||| |||||||  ||||||    
T  45099595 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacaaaagtcaatcgggttgcccgctacagtccctggtgcaccttgttttggt 45099496  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||||||||| ||||||||||||| | ||||||| |||||||||||||||||| ||| |||||||||    
T  45099495 tgaggaccaaaataacatgtcctcccgctcatcctcaacctcgactgattgtacaccggcaccttcgaacc 45099425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 62 - 325
Target Start/End: Original strand, 41578904 - 41579171
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  41578904 acgcgactttaatcaaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacgaaaataaaacataaaaaaatcc 41579003  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||  ||| ||||||||||||  |||||||||    
T  41579004 aaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaagtcaatcaggttgcccgctatagtcactggggcaccttgttttggttga 41579103  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     ||||||||||||||||| |||||| ||||||||| || ||||||||||||||| ||| |||| ||||    
T  41579104 ggaccaaaatagcatgtcttcccgctcctcctcaacctggactgattgtacaccggcaccttcaaacc 41579171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 159 - 397
Target Start/End: Original strand, 43570962 - 43571199
Alignment:
Q  159 aaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgat 258  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||  |||||| ||     
T  43570962 aaacaattaggcattaaaagccatcacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctgaggcaccttgatttggtcgag 43571061  T
Q  259 gaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaatt 358  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||| | ||| |||||||||             ||||||||||||||||||||    
T  43571062 gaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacatcggcaccttcgaacccttctttttttt-cggaaccatcacaaacaatt 43571160  T
Q  359 tcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
      ||| ||||| |||  | ||||||||||||||||||||    
T  43571161 cagtgccatgtcataggcgatttttctttgttcttctca 43571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 62 - 397
Target Start/End: Original strand, 7247037 - 7247376
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| |||||||||||||||| ||||||| |||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  7247037 acgcgactttaatcgaaattattccaaatgcaattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacgaaaataaaacataaaaaaatcc 7247136  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgcta-cggtccctggggcaccttcctttggttg 256  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    |||||||||||||||  ||||||||    
T  7247137 aaaacaattaggcattaaatgccattacattcattcttcctcgtcacacaagtcaatcgggttgcccgctatatttccctggggcaccttgttttggttg 7247236  T
Q  257 atgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaa 356  Q
    | |||||||||||||||||||| ||| ||||||||| || |||||||||||||||  || |||||||||             |||||||||| |||||||    
T  7247237 aggaccaaaatagcatgtcctctcgctcctcctcaacctggactgattgtacaccgacaccttcgaacc-cttcttttttttcggaaccatctcaaacaa 7247335  T
Q  357 tttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||| ||||||||| |||  | ||||||||||||||||||||    
T  7247336 ttttgtgtcatgtcataggcgatttttctttgttcttctca 7247376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 62 - 325
Target Start/End: Original strand, 43570861 - 43571128
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac----nnnnnnnnnnnnnnnntcc 157  Q
    |||||| |||||| ||||||||| |||||||||||||||| ||||||||||||||||||  |||||| | ||| |||                    |||    
T  43570861 acgcgactttaattgaaattattccaaatgcgattttattctaagtaccataatgtcaaataaaatgtgtgcgacacaaaaataaaacataaaaaaatcc 43570960  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
     |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||  |||||| ||    
T  43570961 gaaacaattaggcattaaaagccatcacattcattcttcctcgtcacacaagtcaatcgggttgcccgctacagtccctgaggcaccttgatttggtcga 43571060  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||||||||| ||||||||| |||||||||||||||| | ||| |||||||||    
T  43571061 ggaccaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacatcggcaccttcgaacc 43571128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 155 - 397
Target Start/End: Complemental strand, 46345731 - 46345490
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| |||||||||||| |||| |||||||||||  ||| ||    
T  46345731 tccaaaacaattaggcattaaaagccattacattcattattcctcgtcacacaagtcaatcgagttgcccgctacagtccatggggcaccttgtttttgt 46345632  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaac 354  Q
    ||| |||| |||||||||||||||||||  |||||||| || ||||||||||||||| ||| ||||| |||             ||||||||||||||||    
T  46345631 tgaggaccgaaatagcatgtcctcccgctgctcctcaacctggactgattgtacaccggcaccttcggacc-attcttttttttcggaaccatcacaaac 46345533  T
Q  355 aatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||| ||||| |||  | ||||||||||||||||||||    
T  46345532 aatttcgtgccatgtcataggcgatttttctttgttcttctca 46345490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 157 - 325
Target Start/End: Complemental strand, 52568563 - 52568395
Alignment:
Q  157 caaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttg 256  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||| |||||||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  52568563 caaaataattaggcattaaaagccattacattcattcttccttgtcacacaagtcaatcgtgttgcccactacagtccctggggcaccttgttttggttg 52568464  T
Q  257 atgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    |||| ||||||||||||| ||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  52568463 atgatcaaaatagcatgtgctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 52568395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 4003398 - 4003228
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||||||||||||| ||||||| || |||||  ||||||    
T  4003398 tccaaaacaattaggcattaaaagccattacattcattcttcgtcgtcagacaaatcaatcgggttgcccgctacagtccctgcggtaccttgttttggt 4003299  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| |||||||||||||| |||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  4003298 tgaggaccgaaatagcatgtccttccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 4003228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 54391417 - 54391587
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  54391417 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 54391516  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  54391517 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 54391587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 55268205 - 55268035
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||  ||||||||||||||||  ||||||    
T  55268205 tccaaaacaattaggcattaaaaaccattacattcattcttcctcgtcacacaagtcaatcgggttgcccactagagtccctggggcaccttgttttggt 55268106  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    | | |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| ||| |||||    
T  55268105 tcaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcacctttgaacc 55268035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 2267729 - 2267559
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| || |||||||| ||||||| || |||||  ||||||    
T  2267729 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttacccgctacagtccctgcggtaccttgttttggt 2267630  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| ||||||||||||  || |||||||||    
T  2267629 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccgacaccttcgaacc 2267559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 34050702 - 34050872
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  34050702 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgtggtaccttgttttggt 34050801  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||| ||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  34050802 tgaggaccgaaataacatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 34050872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 36135990 - 36136159
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||||||  || |||||  ||||||    
T  36135990 tccaaaacaaataggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcgggttgcccgctac-gtcccttcggtaccttgttttggt 36136088  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  36136089 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 36136159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 46405980 - 46406150
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  46405980 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 46406079  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||| | ||| |||||||||    
T  46406080 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacatcggcaccttcgaacc 46406150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 49139298 - 49139128
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  49139298 tccaaaacaattaggcattaaaagtcattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 49139199  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  49139198 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 49139128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 158 - 325
Target Start/End: Complemental strand, 34692425 - 34692258
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||| ||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||| |||||||| ||||| | ||||||||  |||||||||    
T  34692425 aaaactattaggcattaaaagtcattacattcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccccgcggcaccttgttttggttga 34692326  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     ||||||| |||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  34692325 ggaccaaagtagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 34692258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 158 - 325
Target Start/End: Complemental strand, 51694677 - 51694510
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| |||||||||| ||||| |||||||| ||||||| | ||||||  ||||||| |    
T  51694677 aaaacaattaggcattaaaagccattacattcattcatcctcgtcacacaagtcaattgggtttcccgctacagtccctgcgacaccttgttttggttta 51694578  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     || ||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  51694577 ggaacaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 51694510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 2646120 - 2645950
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  2646120 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 2646021  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| || || |||||||||||  ||| |||||||||    
T  2646020 tgaggaccgaaatagcatgtcctcccgctcctcctcaaccttgagtgattgtacactggcaccttcgaacc 2645950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 309
Target Start/End: Complemental strand, 55206066 - 55205913
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||  ||||||    
T  55206066 tccaaaagaattaggcattaaaaaccattacattca-tcttcctcgtcacacaagtcaatcaggttgcccactacagtccctggggcaccttgttttggt 55205968  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtaca 309  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  55205967 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgaatgattgtaca 55205913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 158 - 324
Target Start/End: Complemental strand, 49217871 - 49217704
Alignment:
Q  158 aaaacaattaggcattaaaa-gccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttg 256  Q
    |||||||||||||||||||| |||| |||||||| || ||||||||| |||||| ||||||||| |||||||| ||||||| ||||||||  ||||||||    
T  49217871 aaaacaattaggcattaaaatgccactacattcattcatcctcgtcacacaagttaatcgggtttcccgctacagtccctgcggcaccttgttttggttg 49217772  T
Q  257 atgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaac 324  Q
    | ||||||||||||||||| |||||| ||||||||| ||||| |||||||||||| ||| ||||||||    
T  49217771 aggaccaaaatagcatgtcttcccgctcctcctcaacctcgagtgattgtacacccgcaccttcgaac 49217704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 155 - 397
Target Start/End: Complemental strand, 34646344 - 34646107
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||| |||||||||||||| |||||  ||||  || |||||||||||| | | || |||||||||||||||||| |||||| |||||||||| ||||||    
T  34646344 tccaacacaattaggcattacaagccgctaca--ca-tcttcctcgtcacaaaggttaatcgggttgcccgctacagtccctagggcaccttcttttggt 34646248  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaac 354  Q
    ||| |||||||||||||||||||||| | ||||||||| ||||| |||||||||||| ||| |||||||||             ||||||||||||||||    
T  34646247 tgaggaccaaaatagcatgtcctcccactcctcctcaacctcgattgattgtacaccggcaccttcgaacc--cttctttttttcggaaccatcacaaac 34646150  T
Q  355 aatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||| ||| ||||| |||  | ||||||||||||||||||||    
T  34646149 aattttgtgccatgtcataggcgatttttctttgttcttctca 34646107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 3494268 - 3494098
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| | || ||||| || ||| ||||||  ||||||| || |||||  ||||||    
T  3494268 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacataaatcaattggcttgtccgctatagtccctgcggtaccttgttttggt 3494169  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| |||||| || ||| | |||||||| ||| ||| |||||||||    
T  3494168 tgaggaccgaaatagcatgtcctcccgctcctcctgaacctccagtgattgtaaaccggcaccttcgaacc 3494098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 320
Target Start/End: Complemental strand, 20375105 - 20374938
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||||||||| ||||||||||||||| ||   |||||||||| | ||||||||||||||||||||  | |||| |||| ||| | | |||    
T  20375105 tccaaaacaattaggcattagaagccattacattcaatcatcttcctcgtcacataagtcaatcgggttgcccgcggcagtccttggg-cacttgctttt 20375007  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    ||||||||||||||||||||||||||||||| |||||||||  | || |||||||||||| ||| ||||    
T  20375006 ggttgatgaccaaaatagcatgtcctcccgctcctcctcaacttggaatgattgtacaccggcaccttc 20374938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 186 - 310
Target Start/End: Original strand, 43478134 - 43478258
Alignment:
Q  186 attcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacc 285  Q
    ||||| || ||||||||| |||||||||||||||| |||||||| ||||||| |||||| |  ||||||||| |||||||||||||||||||||||| ||    
T  43478134 attcattcatcctcgtcacacaagtcaatcgggtttcccgctacagtccctgcggcaccctgttttggttgaggaccaaaatagcatgtcctcccgctcc 43478233  T
Q  286 tcctcaatctcgactgattgtacac 310  Q
    ||||||| ||||| |||||||||||    
T  43478234 tcctcaacctcgagtgattgtacac 43478258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 197 - 311
Target Start/End: Original strand, 49611272 - 49611386
Alignment:
Q  197 ctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctc 296  Q
    ||||||| ||||||||||| |||| |||||||| ||||||| ||||||||  ||||||||| |||||||||||||||||||||||| ||||||||| |||    
T  49611272 ctcgtcacacaagtcaatcaggtttcccgctacagtccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctcctcctcaacctc 49611371  T
Q  297 gactgattgtacacc 311  Q
    || ||||||||||||    
T  49611372 gagtgattgtacacc 49611386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 11378110 - 11377939
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||||| ||| |||||||||| |||||| || | || |||||| |||||||| | |||    
T  11378110 tccaaaacaattagatattacaaaacattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctagggcacctgctttt 11378011  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  11378010 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 11377939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 51012415 - 51012244
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   |||||| ||| |||||||||| |||||| ||   || || |||||||||||| | |||    
T  51012415 tccaaaacaattagatattacaacccattacattcaatcatattcctcatcacacaagtcaattgggttgtccttgacagttcctggggcacctgctttt 51012316  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  51012315 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 51012244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 192 - 323
Target Start/End: Original strand, 49274547 - 49274678
Alignment:
Q  192 tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||||||| | |||||||||| |||||| || | || ||||||||| ||||| | ||||| ||| |||||||||||||||||||||||| ||||||||    
T  49274547 tcttcctcgtaacacaagtcaattgggttgtcctcgacagtccctgggacacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctca 49274646  T
Q  292 atctcgactgattgtacaccagcatcttcgaa 323  Q
    | ||||| ||||| |||||||||| |||||||    
T  49274647 acctcgaatgattatacaccagcaccttcgaa 49274678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 155 - 312
Target Start/End: Original strand, 27188161 - 27188321
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcag---tcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||| |||| |||||| ||||||||    |||||||| ||| |||||||||||||| |||| || || ||||||||| ||  | | |||    
T  27188161 tccaaaacaattaggtattacaagccactacattcaagcatcttcctcatcacacaagtcaatcgggatgcctgcgacagtccctgggacatttgctttt 27188260  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacacca 312  Q
      |||| || ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  27188261 aattgaggagcaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacacca 27188321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 34471190 - 34471019
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||||| ||| |||||||||| |||||  || | || |||||| |||||||| | |||    
T  34471190 tccaaaacaattagctattacaactcattacattcaatcatcttcctcatcacacaagtcaattgggttttcctcgacagtccctagggcacctgctttt 34471091  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  34471090 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 34471019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 50458379 - 50458216
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   ||||||  || |||||||||| |||||| || | || ||||||||||||||| | |||    
T  50458379 tccaaaacaattagatattacaacccattacattcattcatcttcctcaccacacaagtcaattgggttgtcctcgacagtccctggggcacctgctttt 50458280  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagca 315  Q
    || ||| |||||||||||||||||||||||| | ||||||| ||||| ||||| ||||||||||    
T  50458279 ggctgaggaccaaaatagcatgtcctcccgctcttcctcaacctcgaatgattatacaccagca 50458216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 44928548 - 44928716
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   |||||| ||| |||| ||||| |||||| || | || |||||||||| |||| | |||    
T  44928548 tccaaaacaattagatattacaacccattacattcaatcatcttcctcatcacacaattcaattgggttgtcctcgacagtccctggggaacctgctttt 44928647  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    || ||| |||||||||||||||||||||||| ||||||||| ||||| ||||| ||||| |||| ||||    
T  44928648 ggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgattatacactagcaccttc 44928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 311
Target Start/End: Complemental strand, 27096820 - 27096660
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc----ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctt 250  Q
    ||||||| |||||||||||| || |||||||||||| |     |||||||||| |||||||||| |||||| || | || ||  ||||||||||| | ||    
T  27096820 tccaaaataattaggcattagaaaccattacattcaattcattttcctcgtcacacaagtcaattgggttgtcctcgacagtttctggggcacctgcttt 27096721  T
Q  251 tggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacacc 311  Q
    |||||||   |||||||||||||||||||||| ||||||||| || || ||||||||||||    
T  27096720 tggttgagagccaaaatagcatgtcctcccgctcctcctcaacctagaatgattgtacacc 27096660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 323
Target Start/End: Original strand, 14632608 - 14632726
Alignment:
Q  205 acaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgatt 304  Q
    |||||||||| |||| | || | || |||||| |||||||| | ||||| ||| |||||||||||||||||||||||| ||||||||| ||||| |||||    
T  14632608 acaagtcaattgggtcgtcctcgacagtccctagggcacctgcttttggctgaggaccaaaatagcatgtcctcccgctcctcctcaacctcgaatgatt 14632707  T
Q  305 gtacaccagcatcttcgaa 323  Q
     |||||||||| |||||||    
T  14632708 atacaccagcaccttcgaa 14632726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 24701520 - 24701454
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  24701520 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 24701454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 45099686 - 45099621
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  45099686 tttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcg 45099621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 49611144 - 49611209
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaat 127  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||    
T  49611144 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaat 49611209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 43478023 - 43478082
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||    
T  43478023 tttaatcgaaattatttcaaatgcgactttattctaagtaccataatgtcaaacaaaatg 43478082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 52568656 - 52568598
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaat 127  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  52568656 tttaatcgaaattattccaaatgcgattttattttaagtacgataatgtcaaacaaaat 52568598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 51016376 - 51016547
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || |||||||||||| ||   |||||| ||| |||||||||| |||||| |  | || |||| |||||||||| | |||    
T  51016376 tccaaaacaattagatattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcttcgacagtccatggggcacctgctttt 51016475  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| ||||||||||||||||||| | |   |||||||| ||||| ||||| ||||||| || |||||||    
T  51016476 ggctgaggaccaaaatagcatgtccttctgtttctcctcaacctcgaatgattatacaccatcaccttcgaa 51016547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 49217964 - 49217905
Alignment:
Q  69 tttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||| |||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  49217964 tttaatcaaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 49217905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 51695181 - 51695126
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgt 117  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||    
T  51695181 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgt 51695126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 34692525 - 34692459
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| |||||| ||||||||| |||||||||||||| ||| |||||||    
T  34692525 acgcgactttaatcgaaattattccaaatgtgattttattataagtaccataatgccaaacaaaatg 34692459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 55206163 - 55206097
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||||||    
T  55206163 acgcgactttaatcgaaattatttcaattgcgatcttattctaagtaccataatctcaaacaaaatg 55206097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 10052485 - 10052315
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| ||  ||||||||||| ||   |||| | ||| |||||||||| |||||| || | ||  ||| |||||||||| | |||    
T  10052485 tccaaaacaattagatattacaacacattacattcaatcatcttccgcatcacacaagtcaattgggttgtcctcgacaatccatggggcacctgctttt 10052386  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || | | ||| || ||||||||||||||||| ||||||||| ||||| ||||| |||||||||| |||||||    
T  10052385 ggctaaggac-aatatagcatgtcctcccgctcctcctcaacctcgaatgattatacaccagcaccttcgaa 10052315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 46345830 - 46345754
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    |||||| |||||| ||||||||| ||||| |||||||||| |||||| ||||||||||| ||||||| ||||| |||    
T  46345830 acgcgactttaatagaaattattccaaatacgattttattctaagtaacataatgtcaaacaaaatgtgcgcgacac 46345754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 231 - 325
Target Start/End: Complemental strand, 3497886 - 3497792
Alignment:
Q  231 gtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||||||| || |||||  ||||||||| |||| ||||||||||||||||||| |||||| || ||| | |||||||| ||| ||| |||||||||    
T  3497886 gtccctgcggtaccttgttttggttgaggaccgaaatagcatgtcctcccgctcctcctgaacctccagtgattgtaaaccggcaccttcgaacc 3497792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 24701407 - 24701353
Alignment:
Q  166 taggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggtt 220  Q
    ||||||||||||| ||||||||||| || ||||||||| ||||||||||||||||    
T  24701407 taggcattaaaagtcattacattcattcatcctcgtcacacaagtcaatcgggtt 24701353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 30193531 - 30193597
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| ||||||||| ||||||  ||||||||  |||||||||||||||    
T  30193531 acgcgactttaatcgaaattattccaaatgcgaatttattcaaagtaccaatatgtcaagcaaaatg 30193597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 36135911 - 36135965
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  36135911 ttattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcg 36135965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 20375208 - 20375139
Alignment:
Q  59 aatacgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||| ||||||||||||||||  |||| | ||||||||  ||| |||||||||||||||||||||    
T  20375208 aatacgcgactttaatcgaaattattcaaaatacaattttattcaaagcaccataatgtcaagcaaaatg 20375139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 55268299 - 55268234
Alignment:
Q  63 cgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||| |||||||||||||||| ||||||  |||||||| |||||| ||||||||||| |||||||    
T  55268299 cgcgactttaatcgaaattattccaaatgaaattttattctaagtagcataatgtcaaacaaaatg 55268234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 4003477 - 4003429
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  4003477 ttattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 4003429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20375247 - 20375187
Alignment:
Q  1 gtctttatttaaatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 61  Q
    |||||||||  |||||||||||||||||| |||||| ||||||||| | ||||||||||||    
T  20375247 gtctttattcgaatacacaatttttaatcaaaattaatcaatacgcgactttaatcgaaat 20375187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 2267808 - 2267750
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| |||||||||||||||||| ||||||| ||||| |||    
T  2267808 ttattccaaatgcaattttattctaagtaccataatgtcaaacaaaatgtgcgcgacac 2267750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 3494347 - 3494289
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||||||||||| ||| |||| |||||||||||||||||| ||||||| ||||| |||    
T  3494347 ttatttcaaatgcaattgtattctaagtaccataatgtcaaacaaaatgtgcgcgacac 3494289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 50341571 - 50341432
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattca---gtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||| ||||| |||||||| ||||||    ||||||| |||| |||||||||| || ||| || | || |||||| |||||||| | |||    
T  50341571 tccaaaacaattagacattacaagccatttcattcaatcatcttccttgtcacacaagtcaattggattgtcctcgacagtccctagggcacctgctttt 50341472  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||| | ||   ||||| |||||||| |||| ||||||||    
T  50341471 ggtttaggatagaaataacatgtccttccgctcctcctca 50341432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 52568382 - 52568326
Alignment:
Q  341 gaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||| |||||||||||||||||| || || ||| || ||||||||||||||||||||    
T  52568382 gaactatcacaaacaatttcgtgccacgtcatagacgatttttctttgttcttctca 52568326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 397
Target Start/End: Original strand, 41579192 - 41579247
Alignment:
Q  342 aaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||||||||||  ||||||||| |||  | ||||||||||||||||||||    
T  41579192 aaccatcacaaacaattatgtgtcatgtcataggcgatttttctttgttcttctca 41579247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 46413305 - 46413246
Alignment:
Q  264 aaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    ||||| ||||||||||||| ||||| ||| ||||| ||||| |||||||||| |||||||    
T  46413305 aaatatcatgtcctcccgctcctccgcaacctcgaatgattatacaccagcaccttcgaa 46413246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 2646199 - 2646145
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  2646199 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcg 2646145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 34692240 - 34692182
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||| ||||||||| |||| ||||| |||  | ||||||||||||||||||||    
T  34692240 cggaaccatcgcaaacaattccgtgccatgtcataggcgatttttctttgttcttctca 34692182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 43478285 - 43478343
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||| |||||||||||||| || || |||  | ||||||||||||||||||||    
T  43478285 cggaaccatcgcaaacaatttcgtgccacgtcataggcgatttttctttgttcttctca 43478343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 44928466 - 44928532
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||||| |||||||||| ||| || | ||||||  ||||||||  |||||||||||||||    
T  44928466 acgcgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagcaaaatg 44928532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 45099413 - 45099355
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||||||||||||||  ||||||||| |||    ||||||||||||||||||||    
T  45099413 cggaaccatcacaaacaattatgtgtcatgtcataggtgatttttctttgttcttctca 45099355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 46405901 - 46405955
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  46405901 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcg 46405955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 49611409 - 49611467
Alignment:
Q  339 cggaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||| ||||||||| |||| || || ||| || ||||||||||||||||||||    
T  49611409 cggaaccatcgcaaacaattccgtgccacgtcatagacgatttttctttgttcttctca 49611467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 118
Target Start/End: Original strand, 50998298 - 50998336
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtc 118  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  50998298 ttattccaaatgcgattttattctaagtaccataatgtc 50998336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 51012499 - 51012433
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||||||||||| |||||||||| ||| || | ||||||  ||||||||  |||||||||||||||    
T  51012499 acgcgattttaattgaaattatttaaaacgcaaatttattcaaagtaccaatatgtcaagcaaaatg 51012433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 27096945 - 27096896
Alignment:
Q  12 aatacacaatttttaatcgaaattattcaatacgcaagtttaatcgaaat 61  Q
    ||||| |||||||||||| | |||||||||||||| | ||||||||||||    
T  27096945 aatacccaatttttaatcaagattattcaatacgcgactttaatcgaaat 27096896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 303
Target Start/End: Original strand, 30193623 - 30193774
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattca---gtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||| ||||||  |||| || ||||||||||||    |||||||| ||| |||||||||| |||||| |  | || |||| ||||||||||   |||    
T  30193623 tccaaaataattagctattacaacccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcttcgacagtccatggggcacctgttttt 30193722  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgat 303  Q
    |  ||| |||||||| | ||||||| ||||| ||||||||| ||||| ||||    
T  30193723 gactgaggaccaaaacaacatgtccacccgctcctcctcaacctcgaatgat 30193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 54391338 - 54391386
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| |||||||    
T  54391338 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatg 54391386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 62 - 311
Target Start/End: Complemental strand, 13617122 - 13616869
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  13617122 acgcgactttaatcgaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 13617023  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||||||||||| |||||| ||||||||||||||||  |||||||||    
T  13617022 aaaacaattaggcattgaaagccattacattcattcttccttgtcacacaagtcaatcgggttgctcgctacagtccctggggcaccttgttttggttga 13616923  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacacc 311  Q
     |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  13616922 ggaccaaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacacc 13616869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 62 - 325
Target Start/End: Original strand, 13403796 - 13404063
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn----tcc 157  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||  ||| | |||                    |||    
T  13403796 acgcgactttaatcgaaattatttcaaatgcgattttattctaagtaccataatgtcaaacaaaatttgcgggacacaaaaataaaacataaaaaaatcc 13403895  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||  |||||||||    
T  13403896 aaaacaattaggcattaaaagccattacattcattcttcctcttcacacaagtctatcgggttgcccgctacagtccctggggcacctttttttggttga 13403995  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||| ||||||||||||||| ||| ||||||||| |||||||||||||||| | ||| |||||||||    
T  13403996 ggaccgaaatagcatgtcctctcgctcctcctcaacctcgactgattgtacatcggcaccttcgaacc 13404063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 62 - 325
Target Start/End: Complemental strand, 32026846 - 32026579
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac----nnnnnnnnnnnnnnnntcc 157  Q
    |||||| ||||||| |||||||| |||||| ||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  32026846 acgcgactttaatcaaaattattccaaatgtgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 32026747  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  32026746 aaaacaattaggcattaaaagtcattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttga 32026647  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||| ||||| ||||||||| ||||||| |||||||||| ||| |||||||||    
T  32026646 ggaccaaaatagcatgtccacccgctcctcctcaacctcgactaattgtacaccggcaccttcgaacc 32026579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 62 - 325
Target Start/End: Complemental strand, 32036905 - 32036638
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac----nnnnnnnnnnnnnnnntcc 157  Q
    |||||| ||||||| |||||||| |||||| ||||||||| |||||||||||||||||| ||||||| ||||| |||                    |||    
T  32036905 acgcgactttaatcaaaattattccaaatgtgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaatcc 32036806  T
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  32036805 aaaacaattaggcattaaaagtcattacattcattcttcctcatcacacaagtcaatcgggttgcccgctacagtccctggggcaccttgttttggttga 32036706  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
     |||||||||||||||||| ||||| ||||||||| ||||||| |||||||||| ||| |||||||||    
T  32036705 ggaccaaaatagcatgtccacccgctcctcctcaacctcgactaattgtacaccggcaccttcgaacc 32036638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 62 - 325
Target Start/End: Complemental strand, 34802407 - 34802139
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcacnnnnnnnnnnnnnnnn-----tc 156  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||| |||                     ||    
T  34802407 acgcgactttaatagaaattatttcaaatgcgattttattctaagtaccataatgtcaaacaaaatgtgcgcgacacaaaaataaaacataaaaaaaatc 34802308  T
Q  157 caaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttg 256  Q
    | |||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||  ||||||||    
T  34802307 ctaaacaaataggcattaaaagtcattacattcattcttcctcgtcacacaagtcaaccgggttgcctgctacagtccctggggcaccttgttttggttg 34802208  T
Q  257 atgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    | ||| |||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||| |||||    
T  34802207 aggacaaaaatagcatgtcctcccgctcctcctcaacctcgactgattgtacaccggcacctttgaacc 34802139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 6206449 - 6206619
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  6206449 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 6206548  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  6206549 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 6206619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 11693416 - 11693586
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  11693416 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 11693515  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  11693516 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 11693586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 27641139 - 27641309
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| || ||| ||||||| ||||||| || |||||  ||||||    
T  27641139 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaattggcttgtccgctacagtccctgcggtaccttgttttggt 27641238  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||    
T  27641239 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacaccggcaccttcgaacc 27641309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 155 - 310
Target Start/End: Complemental strand, 32691835 - 32691680
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||  ||||||    
T  32691835 tccaaaacaattaggcattaaaagccattacattcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttgttttggt 32691736  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacac 310  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||| | | |||||||||    
T  32691735 tgaggaccgaaatagcatgtcctcccgctcctcctcaacctcaagtaattgtacac 32691680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 14123787 - 14123958
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||||||||| ||| ||||||||||| ||   ||| |||||| ||||||||||||||||||||||||| ||||||| ||||||| | |||    
T  14123787 tccaaaacaattaggcattacaagtcattacattcattcatcttcatcgtcacacaagtcaatcgggttgcccgctacagtccctgcggcacctactttt 14123886  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    | || | ||||||| |||||||||||||| | |||||| || |||||||||||||||| ||||| |||||||    
T  14123887 gattaaggaccaaagtagcatgtcctcccactcctccttaacctcgactgattgtacatcagcaccttcgaa 14123958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 155 - 288
Target Start/End: Complemental strand, 35020380 - 35020248
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| |||||| |||||||||  ||||||    
T  35020380 tccaaaacaattaggcattaaaaaccattacattcattcttcctcgtcacacaagtcaatcgggttg-ccactacagtccctagggcaccttgttttggt 35020282  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcc 288  Q
    ||| |||| ||||| ||||||||||||| |||||    
T  35020281 tgaggaccgaaataacatgtcctcccgctcctcc 35020248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 29067587 - 29067713
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || |||| |||| ||||||||||||||||  ||||||| | ||||| ||||||||  ||||||||| |||||||||||||||||||||||| |    
T  29067587 cattcattcatccttgtcacacaagtcaatcgggttttccgctacagcccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 29067686  T
Q  285 ctcctcaatctcgactgattgtacacc 311  Q
     ||||||| ||||| ||||||||||||    
T  29067687 atcctcaacctcgagtgattgtacacc 29067713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 311
Target Start/End: Original strand, 29109176 - 29109302
Alignment:
Q  185 cattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcac 284  Q
    |||||| || |||| |||| ||||||||||||||||  ||||||| | ||||| ||||||||  ||||||||| |||||||||||||||||||||||| |    
T  29109176 cattcattcatccttgtcacacaagtcaatcgggttttccgctacagcccctgcggcaccttgttttggttgaggaccaaaatagcatgtcctcccgctc 29109275  T
Q  285 ctcctcaatctcgactgattgtacacc 311  Q
     ||||||| ||||| ||||||||||||    
T  29109276 atcctcaacctcgagtgattgtacacc 29109302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 323
Target Start/End: Original strand, 12397876 - 12398046
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| |  |||||||||||| ||   |||||| ||| |||||||||| |||||| || | || ||||||||| ||||| | |||    
T  12397876 tccaaaacaattagatattacagcccattacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggg-cacctgctttt 12397974  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    || ||| |||||||||| ||||||||||||| ||||||||| ||||| ||||| ||||||| || |||||||    
T  12397975 ggctgaggaccaaaatatcatgtcctcccgctcctcctcaacctcgaatgattatacaccaacaccttcgaa 12398046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 20241480 - 20241309
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||| |||||| ||||| ||||||||||||||| ||   |||||||||| |||||||||| |||||| || | || |||||| ||| |||| | |||    
T  20241480 tccaaaataattagacattacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcaacagtcccttgggaacctgctttt 20241381  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    |||||| ||||||||||||||  ||||| || ||||||||| || ||  |||| |||||| ||| |||||||    
T  20241380 ggttgaggaccaaaatagcataacctcctgctcctcctcaaactggaacgattatacaccggcaccttcgaa 20241309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 22135464 - 22135293
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||| |||||| ||||| ||||||||||||||| ||   |||||||||| |||||||||| |||||| || | || |||||| ||| |||| | |||    
T  22135464 tccaaaataattagacattacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcaacagtcccttgggaacctgctttt 22135365  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    |||||| ||||||||||||||  ||||| || ||||||||| || ||  |||| |||||| ||| |||||||    
T  22135364 ggttgaggaccaaaatagcataacctcctgctcctcctcaaactggaacgattatacaccggcaccttcgaa 22135293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 22142817 - 22142646
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||| |||||| ||||| ||||||||||||||| ||   |||||||||| |||||||||| |||||| || | || |||||| ||| |||| | |||    
T  22142817 tccaaaataattagacattacaagccattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcaacagtcccttgggaacctgctttt 22142718  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    |||||| ||||||||||||||  ||||| || ||||||||| || ||  |||| |||||| ||| |||||||    
T  22142717 ggttgaggaccaaaatagcataacctcctgctcctcctcaaactggaacgattatacaccggcaccttcgaa 22142646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 155 - 320
Target Start/End: Complemental strand, 32133797 - 32133629
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||| ||||| |||||| ||| ||||||||||| ||   |||||||||| ||| ||||||| ||||| |  | || |||||||||| |||| | |||    
T  32133797 tccaaaataattacgcattagaagtcattacattcattcatcttcctcgtcacacaggtcaatcaggttgtcatcgacagtccctggggaacctgctttt 32133698  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    || ||| |||||||||||||||||||| | | |||| |||  |||||||||||| ||||||||| ||||    
T  32133697 ggctgaggaccaaaatagcatgtcctctcactcctcttcagcctcgactgattgcacaccagcaccttc 32133629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 29067471 - 29067537
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||||    
T  29067471 acgcgagtttaatcgaaattattccaaatgcgattttattccaagtaccataatgtcaaacaaaatg 29067537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 29109060 - 29109126
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||||    
T  29109060 acgcgagtttaatcgaaattattccaaatgcgattttattccaagtaccataatgtcaaacaaaatg 29109126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 291
Target Start/End: Complemental strand, 30764110 - 30763971
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||| ||||| ||||||||||||||| ||   |||||||||| |||||||||| |||||| || | || |||| ||||||||   | |||    
T  30764110 tccaaaacaattagacattacaagccattacattcaatcattttcctcgtcacacaagtcaattgggttgtcctcgacagtccatggggcactcgctttt 30764011  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||| |||| ||||| |||||| | |||| ||||||||    
T  30764010 ggttgaggaccgaaataacatgtcattccgctcctcctca 30763971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 35020475 - 35020411
Alignment:
Q  64 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||| ||||||| |||||||| |||||||||||||||| || ||||||||||||||| |||||||    
T  35020475 gcgactttaatcaaaattattgcaaatgcgattttattctaggtaccataatgtcaaacaaaatg 35020411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 17464547 - 17464487
Alignment:
Q  231 gtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    ||||||||| ||||| | ||||||||| |||||||||| ||||||||||||| ||||||||    
T  17464547 gtccctgggacacctgcttttggttgaggaccaaaataacatgtcctcccgctcctcctca 17464487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 33201361 - 33201500
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattca---gtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||| ||||| ||| |||||||||||    |||||||||||| ||||||||||  ||||| || | ||  ||||||| ||||||   |||    
T  33201361 tccaaaacaattagacattacaagtcattacattcaatcatcttcctcgtcacacaagtcaattaggttgtcctcgacattccctggcgcacctgatttt 33201460  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctca 291  Q
    |||||| |||| | ||| |||||||| |||| | ||||||    
T  33201461 ggttgaggaccgatataacatgtccttccgctcttcctca 33201500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 6206370 - 6206424
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  6206370 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcg 6206424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 11693337 - 11693391
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  11693337 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcg 11693391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 32691914 - 32691856
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| ||||| |||    
T  32691914 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcgacac 32691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 30764214 - 30764178
Alignment:
Q  23 tttaatcgaaattattcaatacgcaagtttaatcgaa 59  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  30764214 tttaatcgaatttattcaatacgcaactttaatcgaa 30764178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 30764241 - 30764205
Alignment:
Q  23 tttaatcgaaattattcaatacgcaagtttaatcgaa 59  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  30764241 tttaatcgaatttattcaatacgcaactttaatcgaa 30764205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 30764268 - 30764232
Alignment:
Q  23 tttaatcgaaattattcaatacgcaagtttaatcgaa 59  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  30764268 tttaatcgaaattattcaatacacaactttaatcgaa 30764232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 158 - 397
Target Start/End: Original strand, 2862 - 3099
Alignment:
Q  158 aaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggttga 257  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||| |||||||||||||||| |||||||| ||||||| ||||||||  |||||||||    
T  2862 aaaacaattaggcattaaaagtcattacattcattcctcctcgtcacacaagtcaatcgggtttcccgctacagtccctgtggcaccttgttttggttga 2961  T
Q  258 tgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaaccnnnnnnnnnnnnncggaaccatcacaaacaat 357  Q
     ||||||||||||||||| |||||| ||||||||| ||||| ||||||||| || ||| |||||||||             |||||||||| ||||||||    
T  2962 ggaccaaaatagcatgtcatcccgctcctcctcaacctcgagtgattgtactccggcaccttcgaacccttcttttttt--cggaaccatcgcaaacaat 3059  T
Q  358 ttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||| || || |||  | ||||||||||||||||||||    
T  3060 ttcgtgccacgtcataggcgatttttctttgttcttctca 3099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 2762 - 2825
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaa 125  Q
    |||||| |||||||||||||||| ||||||||||| |||| |||||||||||||||||| ||||    
T  2762 acgcgactttaatcgaaattattccaaatgcgattgtattataagtaccataatgtcaaacaaa 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 98; Significance: 4e-48; HSPs: 3)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 156 - 321
Target Start/End: Complemental strand, 4684 - 4519
Alignment:
Q  156 ccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggtt 255  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| |||||||||||| |||| |||||||||||  ||| |||    
T  4684 ccaaaacaattaggcattaaaagccattacattcattattcctcgtcacacaagtcaatcgagttgcccgctacagtccatggggcaccttgtttttgtt 4585  T
Q  256 gatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcg 321  Q
    || |||| |||||||||||||||||||  |||||||| || ||||||||||||||| ||| |||||    
T  4584 gaggaccgaaatagcatgtcctcccgctgctcctcaacctggactgattgtacaccggcaccttcg 4519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 4787 - 4715
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcg 134  Q
    |||||| |||||| ||||||||| ||||| |||||||||| |||||| ||||||||||| ||||||| |||||    
T  4787 acgcgactttaatagaaattattccaaatacgattttattctaagtaacataatgtcaaacaaaatgtgcgcg 4715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 397
Target Start/End: Complemental strand, 4497 - 4441
Alignment:
Q  342 aaccatcacaaacaatttcgtgtcatgtaataaacaatttttc-tttgttcttctca 397  Q
    |||||||||||||||||||||| ||||| |||  | ||||||| |||||||||||||    
T  4497 aaccatcacaaacaatttcgtgccatgtcataggcgatttttcttttgttcttctca 4441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 5968 - 5798
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttcctttggt 254  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||||| |||| |||||||| ||| ||||||| ||||||| || |||||| ||||||    
T  5968 tccaaaacaattaggcattaaaagccattactgtcattcttcctcgtcacacaaatcaatcggcttgtccgctacagtccctgcggtaccttcttttggt 5869  T
Q  255 tgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaacc 325  Q
    ||| |||| ||||||||||||||||||| ||||||||| ||||| |||||||||||  ||| |||||||||    
T  5868 tgaggacctaaatagcatgtcctcccgctcctcctcaacctcgagtgattgtacactggcaccttcgaacc 5798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 6047 - 5989
Alignment:
Q  80 ttatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatgcgcgcggcac 138  Q
    ||||| ||||||| |||||||| ||| |||||||||||||| ||||||| ||||| |||    
T  6047 ttattccaaatgcaattttattctaaataccataatgtcaaacaaaatgtgcgcgacac 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 1416 - 1584
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||| ||||||| | | ||||||||||| ||   |||||||||| |||||||||| |||||| || | || ||||||| ||||||||| |||    
T  1416 tccaaaacaatttggcattagatgtcattacattcaatcatcttcctcgtcacacaagtcaattgggttgtcctcgacagtccctgaggcaccttctttt 1515  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttc 320  Q
    |||||| ||   ||||||||||| | ||||| ||||||||| ||||| ||||| |||||| ||| ||||    
T  1516 ggttgaggatagaaatagcatgttcacccgctcctcctcaacctcgattgattatacaccggcaccttc 1584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 397
Target Start/End: Original strand, 1603 - 1659
Alignment:
Q  341 gaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    ||||||||||||||||||||||| ||||| |||  | |||||||||| || ||||||    
T  1603 gaaccatcacaaacaatttcgtgccatgtcataggcgatttttctttcttgttctca 1659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 310
Target Start/End: Original strand, 5380 - 5538
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattcagtc---ttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    ||||||||||||||  |||| || ||| |||||||| ||   |||||| ||| |||||||||| |||||| || | || |||||||||||||||   |||    
T  5380 tccaaaacaattagatattacaacccaatacattcaatcatcttcctcatcacacaagtcaattgggttgtcctcgacagtccctggggcacctggtttt 5479  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacac 310  Q
    || ||| |||||||||||||||||||||| | |||||| || ||||| ||||| |||||    
T  5480 ggctgaggaccaaaatagcatgtcctcccactcctccttaacctcgaatgattatacac 5538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 5261 - 5298
Alignment:
Q  62 acgcgattttaatcgaaattatttcaaatgcgatttta 99  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  5261 acgcgactttaatcgaaattattccaaatgcgatttta 5298  T

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Target: scaffold0192 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 17176 - 17112
Alignment:
Q  64 gcgattttaatcgaaattatttcaaatgcgattttattttaagtaccataatgtcaagcaaaatg 128  Q
    |||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  17176 gcgactttaatcaaaattattccaaatgcgattttattctaagtaccataatgtcaaacaaaatg 17112  T

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Target: scaffold0192; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 17025 - 16969
Alignment:
Q  341 gaaccatcacaaacaatttcgtgtcatgtaataaacaatttttctttgttcttctca 397  Q
    |||||||||| |||||||||||| ||||| ||| || ||||||||||||||||||||    
T  17025 gaaccatcactaacaatttcgtgccatgtcatagacgatttttctttgttcttctca 16969  T

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Target: scaffold0192; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 17080 - 17037
Alignment:
Q  157 caaaacaattaggcattaaaagccattacattcagtcttcctcg 200  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||    
T  17080 caaaacaattaggcattaaaagctattacagtcattcttcctcg 17037  T

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Target: scaffold0258 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 155 - 289
Target Start/End: Original strand, 9570 - 9707
Alignment:
Q  155 tccaaaacaattaggcattaaaagccattacattca---gtcttcctcgtcatacaagtcaatcgggttgcccgctacggtccctggggcaccttccttt 251  Q
    |||||||||||||| ||||| ||||||||||||| |    |||||||| ||| | |||||||| |||||| || | |  |||||| |||||| |   |||    
T  9570 tccaaaacaattagacattacaagccattacatttaatcatcttcctcttcacataagtcaattgggttgtcctcgatagtccctagggcacatgatttt 9669  T
Q  252 ggttgatgaccaaaatagcatgtcctcccgcacctcct 289  Q
    |||||| |||||||||| |||||||| |||| ||||||    
T  9670 ggttgaggaccaaaataacatgtccttccgctcctcct 9707  T

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Target: scaffold0500 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 1663 - 1571
Alignment:
Q  231 gtccctggggcaccttcctttggttgatgaccaaaatagcatgtcctcccgcacctcctcaatctcgactgattgtacaccagcatcttcgaa 323  Q
    ||||||||| ||||| | ||| ||||| ||| |||||| || ||||| |||| |||||||| ||| ||||||||||||| | ||| |||||||    
T  1663 gtccctgggccacctgcttttagttgaggactaaaataacaagtccttccgctcctcctcagtctggactgattgtacatcggcaccttcgaa 1571  T

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