View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8232_low_1 (Length: 513)

Name: NF8232_low_1
Description: NF8232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8232_low_1
NF8232_low_1
[»] chr3 (44 HSPs)
chr3 (143-483)||(36719083-36719423)
chr3 (143-239)||(42148868-42148964)
chr3 (143-239)||(6144173-6144269)
chr3 (143-239)||(11269446-11269542)
chr3 (143-239)||(40798805-40798901)
chr3 (143-239)||(52514896-52514992)
chr3 (143-238)||(4014941-4015036)
chr3 (143-238)||(51755350-51755445)
chr3 (143-237)||(21342979-21343073)
chr3 (143-239)||(11249314-11249410)
chr3 (143-239)||(16851863-16851959)
chr3 (145-239)||(55175794-55175887)
chr3 (143-236)||(10492228-10492321)
chr3 (143-239)||(11094299-11094395)
chr3 (143-239)||(27739361-27739457)
chr3 (143-239)||(31977799-31977894)
chr3 (143-239)||(32743990-32744086)
chr3 (143-239)||(39998824-39998920)
chr3 (143-238)||(15294663-15294757)
chr3 (152-239)||(40798386-40798472)
chr3 (143-238)||(40877652-40877747)
chr3 (148-239)||(52514427-52514517)
chr3 (143-238)||(55176227-55176322)
chr3 (143-234)||(27296949-27297037)
chr3 (143-235)||(4331647-4331739)
chr3 (143-239)||(34542922-34543018)
chr3 (143-238)||(4014631-4014726)
chr3 (151-238)||(19843251-19843337)
chr3 (144-239)||(21343305-21343399)
chr3 (143-239)||(12897987-12898083)
chr3 (148-239)||(51753710-51753800)
chr3 (152-227)||(22935520-22935596)
chr3 (143-239)||(28816798-28816888)
chr3 (166-238)||(4330871-4330943)
chr3 (143-202)||(19341420-19341479)
chr3 (176-239)||(14016610-14016673)
chr3 (160-239)||(19341484-19341561)
chr3 (143-235)||(47443570-47443662)
chr3 (183-238)||(8475995-8476050)
chr3 (143-239)||(42148429-42148515)
chr3 (177-222)||(53642909-53642954)
chr3 (160-212)||(53643602-53643654)
chr3 (198-238)||(33471573-33471613)
chr3 (200-238)||(54964847-54964885)
[»] chr8 (44 HSPs)
chr8 (143-239)||(23512183-23512279)
chr8 (143-238)||(30026101-30026196)
chr8 (143-238)||(34798675-34798770)
chr8 (143-239)||(2334934-2335030)
chr8 (143-239)||(36314170-36314266)
chr8 (143-239)||(44934044-44934140)
chr8 (143-228)||(2712551-2712636)
chr8 (143-239)||(27501781-27501877)
chr8 (143-239)||(32584243-32584339)
chr8 (143-239)||(36314027-36314123)
chr8 (143-239)||(38604038-38604134)
chr8 (143-239)||(41858631-41858726)
chr8 (148-239)||(3695506-3695596)
chr8 (143-238)||(45410015-45410110)
chr8 (143-224)||(43263124-43263205)
chr8 (143-239)||(915465-915561)
chr8 (143-239)||(25994585-25994681)
chr8 (143-239)||(28617745-28617841)
chr8 (143-239)||(31185275-31185371)
chr8 (143-239)||(38133308-38133404)
chr8 (143-239)||(41859045-41859141)
chr8 (143-239)||(43363050-43363146)
chr8 (143-238)||(23512607-23512702)
chr8 (143-238)||(45252438-45252533)
chr8 (146-239)||(3695950-3696043)
chr8 (143-239)||(36345139-36345235)
chr8 (151-235)||(43520036-43520119)
chr8 (148-239)||(2712981-2713071)
chr8 (143-238)||(5532818-5532913)
chr8 (143-238)||(10749504-10749599)
chr8 (148-239)||(25994986-25995076)
chr8 (143-226)||(34502977-34503060)
chr8 (151-238)||(45410797-45410884)
chr8 (148-227)||(21248320-21248398)
chr8 (143-219)||(4528285-4528361)
chr8 (143-238)||(4529102-4529197)
chr8 (151-239)||(22960757-22960844)
chr8 (143-238)||(4394869-4394964)
chr8 (143-228)||(30025160-30025243)
chr8 (314-356)||(26237501-26237543)
chr8 (317-356)||(2416181-2416220)
chr8 (200-238)||(21406380-21406418)
chr8 (200-238)||(21800872-21800910)
chr8 (296-356)||(27412349-27412412)
[»] chr7 (33 HSPs)
chr7 (143-239)||(27657162-27657258)
chr7 (143-280)||(38265955-38266092)
chr7 (143-239)||(5026672-5026768)
chr7 (143-239)||(28564414-28564510)
chr7 (143-239)||(29097705-29097801)
chr7 (143-239)||(31512436-31512532)
chr7 (143-239)||(35839507-35839603)
chr7 (143-235)||(38265548-38265640)
chr7 (143-239)||(48000329-48000425)
chr7 (143-239)||(25195376-25195472)
chr7 (143-239)||(26833313-26833409)
chr7 (143-235)||(30471384-30471476)
chr7 (143-239)||(47750659-47750755)
chr7 (143-238)||(32606909-32607004)
chr7 (143-239)||(29112476-29112571)
chr7 (143-239)||(29112954-29113050)
chr7 (143-239)||(42582858-42582954)
chr7 (143-239)||(46908289-46908385)
chr7 (143-239)||(48900994-48901090)
chr7 (150-235)||(7953622-7953707)
chr7 (143-239)||(42794945-42795041)
chr7 (143-239)||(49140845-49140941)
chr7 (143-238)||(35839965-35840059)
chr7 (146-236)||(34508702-34508791)
chr7 (143-239)||(38083978-38084073)
chr7 (151-239)||(19073431-19073518)
chr7 (164-239)||(30468585-30468659)
chr7 (156-238)||(12080599-12080680)
chr7 (166-238)||(12027480-12027552)
chr7 (198-238)||(42024397-42024437)
chr7 (198-238)||(42025013-42025053)
chr7 (165-213)||(48901390-48901437)
chr7 (143-171)||(25195824-25195852)
[»] chr2 (39 HSPs)
chr2 (143-239)||(4014404-4014500)
chr2 (143-238)||(28419992-28420087)
chr2 (143-239)||(10425024-10425120)
chr2 (143-238)||(2528793-2528888)
chr2 (143-289)||(38779494-38779640)
chr2 (143-239)||(4014949-4015044)
chr2 (143-239)||(29947949-29948045)
chr2 (143-239)||(30802812-30802908)
chr2 (143-239)||(39461981-39462077)
chr2 (143-239)||(43329077-43329172)
chr2 (143-238)||(37321303-37321398)
chr2 (143-238)||(39210992-39211086)
chr2 (143-238)||(39489357-39489452)
chr2 (143-238)||(40157326-40157421)
chr2 (145-239)||(7779745-7779838)
chr2 (143-239)||(7780178-7780274)
chr2 (143-239)||(9089277-9089372)
chr2 (146-237)||(33002171-33002262)
chr2 (148-239)||(40969489-40969579)
chr2 (143-239)||(36510657-36510753)
chr2 (143-238)||(6233416-6233511)
chr2 (143-238)||(29905593-29905688)
chr2 (147-238)||(39211437-39211528)
chr2 (148-239)||(39462397-39462487)
chr2 (143-236)||(2529250-2529342)
chr2 (143-239)||(9088844-9088940)
chr2 (143-238)||(41272716-41272811)
chr2 (151-228)||(2270992-2271068)
chr2 (146-239)||(33002089-33002181)
chr2 (143-228)||(41273086-41273171)
chr2 (166-238)||(40156542-40156614)
chr2 (143-212)||(39186593-39186662)
chr2 (159-239)||(15488027-15488107)
chr2 (148-239)||(39186163-39186254)
chr2 (314-356)||(17911152-17911194)
chr2 (177-221)||(10472783-10472827)
chr2 (196-239)||(16741317-16741360)
chr2 (168-228)||(35935303-35935363)
chr2 (314-356)||(24541715-24541757)
[»] chr1 (48 HSPs)
chr1 (143-239)||(39895096-39895192)
chr1 (143-239)||(4883413-4883509)
chr1 (143-239)||(7943751-7943847)
chr1 (143-239)||(21700685-21700781)
chr1 (147-238)||(7820684-7820775)
chr1 (143-238)||(18609294-18609389)
chr1 (143-238)||(45780329-45780424)
chr1 (143-228)||(49502248-49502333)
chr1 (143-239)||(6328735-6328831)
chr1 (143-239)||(19914657-19914753)
chr1 (143-239)||(26606911-26607007)
chr1 (143-239)||(26769299-26769395)
chr1 (143-239)||(30194609-30194705)
chr1 (143-239)||(35254677-35254773)
chr1 (143-239)||(37991758-37991854)
chr1 (143-239)||(43011950-43012046)
chr1 (143-239)||(44726503-44726599)
chr1 (143-239)||(45780777-45780872)
chr1 (143-239)||(49661597-49661693)
chr1 (143-239)||(51291424-51291520)
chr1 (143-238)||(7820238-7820333)
chr1 (146-228)||(23442416-23442498)
chr1 (143-239)||(586399-586495)
chr1 (143-239)||(26607335-26607430)
chr1 (143-239)||(27649858-27649954)
chr1 (143-239)||(50683336-50683431)
chr1 (149-239)||(9618854-9618944)
chr1 (142-239)||(641158-641255)
chr1 (143-228)||(47652887-47652972)
chr1 (143-238)||(46908509-46908604)
chr1 (152-239)||(46909429-46909515)
chr1 (145-239)||(30287834-30287928)
chr1 (145-239)||(49875179-49875272)
chr1 (143-239)||(35255140-35255235)
chr1 (143-219)||(35719358-35719434)
chr1 (148-239)||(49502679-49502769)
chr1 (145-239)||(26770433-26770526)
chr1 (157-239)||(28456588-28456669)
chr1 (143-238)||(27649389-27649483)
chr1 (154-237)||(51290464-51290546)
chr1 (149-235)||(39896404-39896489)
chr1 (198-238)||(45943653-45943693)
chr1 (186-238)||(51461764-51461816)
chr1 (177-227)||(33081741-33081791)
chr1 (186-239)||(49875112-49875165)
chr1 (143-175)||(7820651-7820683)
chr1 (200-238)||(3941075-3941113)
chr1 (200-236)||(46043618-46043654)
[»] chr5 (19 HSPs)
chr5 (143-239)||(35651457-35651553)
chr5 (143-238)||(42912273-42912368)
chr5 (143-239)||(18563774-18563870)
chr5 (143-235)||(20509383-20509475)
chr5 (143-239)||(41066015-41066111)
chr5 (143-239)||(3891667-3891763)
chr5 (143-227)||(5099487-5099571)
chr5 (143-239)||(8679696-8679791)
chr5 (143-239)||(8680082-8680178)
chr5 (151-239)||(20743236-20743323)
chr5 (148-239)||(22212115-22212205)
chr5 (143-234)||(41066437-41066527)
chr5 (296-356)||(5654971-5655032)
chr5 (198-238)||(25983471-25983511)
chr5 (159-206)||(5099799-5099846)
chr5 (295-342)||(13590665-13590712)
chr5 (314-356)||(4434354-4434396)
chr5 (197-239)||(35281911-35281953)
chr5 (198-238)||(25984158-25984198)
[»] chr4 (51 HSPs)
chr4 (143-239)||(11566667-11566763)
chr4 (143-239)||(21342833-21342928)
chr4 (143-239)||(28320639-28320735)
chr4 (143-239)||(36479928-36480024)
chr4 (143-236)||(16473522-16473615)
chr4 (143-236)||(21343214-21343307)
chr4 (143-239)||(14200747-14200843)
chr4 (143-239)||(32537646-32537742)
chr4 (143-239)||(37295369-37295465)
chr4 (143-239)||(40833399-40833495)
chr4 (143-239)||(50447189-50447285)
chr4 (143-239)||(51037248-51037344)
chr4 (143-238)||(28234582-28234677)
chr4 (143-238)||(46561820-46561915)
chr4 (143-239)||(1735933-1736028)
chr4 (143-239)||(9655328-9655424)
chr4 (143-239)||(9655750-9655845)
chr4 (143-239)||(29307298-29307394)
chr4 (143-239)||(38368982-38369078)
chr4 (143-239)||(40963558-40963653)
chr4 (143-239)||(46254242-46254338)
chr4 (143-239)||(55587537-55587633)
chr4 (143-238)||(16472666-16472761)
chr4 (143-238)||(28235378-28235473)
chr4 (145-236)||(36480378-36480468)
chr4 (143-238)||(56566497-56566592)
chr4 (148-238)||(28321964-28322053)
chr4 (143-239)||(1735505-1735602)
chr4 (143-236)||(28157720-28157812)
chr4 (143-239)||(40240211-40240306)
chr4 (143-239)||(42528975-42529070)
chr4 (143-238)||(46561406-46561501)
chr4 (146-236)||(35631303-35631393)
chr4 (149-238)||(45971641-45971730)
chr4 (143-238)||(56565921-56566015)
chr4 (148-239)||(7485460-7485551)
chr4 (143-214)||(40239787-40239858)
chr4 (148-239)||(46169049-46169139)
chr4 (161-238)||(55704624-55704701)
chr4 (151-239)||(7087987-7088074)
chr4 (162-235)||(33812746-33812818)
chr4 (143-199)||(32538221-32538278)
chr4 (159-228)||(55704264-55704331)
chr4 (198-238)||(9473587-9473627)
chr4 (180-239)||(12376105-12376164)
chr4 (187-238)||(46165859-46165910)
chr4 (200-238)||(17343337-17343375)
chr4 (180-237)||(36004205-36004263)
chr4 (198-238)||(9472965-9473005)
chr4 (198-238)||(17342247-17342287)
chr4 (143-171)||(46165904-46165932)
[»] scaffold1644 (1 HSPs)
scaffold1644 (143-238)||(1250-1345)
[»] chr6 (20 HSPs)
chr6 (143-238)||(6760664-6760759)
chr6 (143-239)||(117370-117466)
chr6 (143-239)||(3177656-3177752)
chr6 (143-238)||(17337790-17337885)
chr6 (143-238)||(26350113-26350208)
chr6 (143-238)||(32396048-32396143)
chr6 (143-238)||(2109683-2109778)
chr6 (143-238)||(26350907-26351002)
chr6 (143-238)||(32396697-32396792)
chr6 (143-239)||(455877-455972)
chr6 (143-239)||(32552619-32552714)
chr6 (143-238)||(13158529-13158624)
chr6 (143-238)||(13163385-13163480)
chr6 (142-239)||(15545865-15545965)
chr6 (143-239)||(8708103-8708199)
chr6 (143-239)||(35097399-35097491)
chr6 (148-238)||(7677990-7678079)
chr6 (183-239)||(455513-455569)
chr6 (171-237)||(29359005-29359071)
chr6 (18-55)||(32629613-32629650)
[»] scaffold0016 (1 HSPs)
scaffold0016 (143-239)||(69009-69105)
[»] scaffold0012 (2 HSPs)
scaffold0012 (200-238)||(232634-232672)
scaffold0012 (200-238)||(232759-232797)


Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 143 - 483
Target Start/End: Complemental strand, 36719423 - 36719083
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtcnnn 242  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       
T  36719423 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaacaatcaaaatcaataaatattaataatgacaatttaaggtttttgtcaaa 36719324  T
Q  243 nnnn-tatcaggtttgaagtttccgcggcagttaaatgttgaaatttttgtgatagttaactacagccgtttgacttccgcggcagttaactg-tcgaag 340  Q
         ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||  ||||||    
T  36719323 aaaaatatcaggtttgaagtttccgcggcagttaaatgttgaaattttcgcgatagttaactacagccgtttgacttccgcggcagttaacttatcgaag 36719224  T
Q  341 gacattttagtatttttattagnnnnnnnncatccaaacactttgtataatacaacaattttcattaaagcatggtggaagttctatcccccaacctttg 440  Q
    |||||||||||||||| |||||        |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36719223 gacattttagtatttt-attagtgttttt-catccaaacactatgtttaatacaacaattttcattaaagcatggtggaagttctatccgccaacctttg 36719126  T
Q  441 ttggccatatctgccctaacttgctttagatggattgatggtt 483  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  36719125 ttggccatatctgccctaacttgctttagatgcattgatggtt 36719083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 42148868 - 42148964
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  42148868 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 42148964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 6144173 - 6144269
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| || |||||||    
T  6144173 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggattttgtc 6144269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 11269542 - 11269446
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  11269542 ataagtataatactgcaattgtttggaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 11269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 40798805 - 40798901
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| | ||||||||    
T  40798805 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatgatttttgtc 40798901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 52514896 - 52514992
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  52514896 ataagtataacactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 52514992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 4014941 - 4015036
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||| |||||||||    
T  4014941 ataaatataatactgcaattgtttgaaacgtactaaaataatgattgaaacattcaaaatcaataaatattattaatgataatttatggtttttgt 4015036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 51755350 - 51755445
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  51755350 ataagtataatactacaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 51755445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 21343073 - 21342979
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttg 237  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||    
T  21343073 ataactataatactgcaattgtttgaaacgtattaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttg 21342979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 11249314 - 11249410
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  11249314 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 11249410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 16851863 - 16851959
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  16851863 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 16851959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 55175887 - 55175794
Alignment:
Q  145 aagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  55175887 aagtataatactacaattgtttgaaacgt-ctaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 55175794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 10492321 - 10492228
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggttttt 236  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| |||| |||| |||||||    
T  10492321 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacagtttatggttttt 10492228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 11094395 - 11094299
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  11094395 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaactttcaaaatcaataaatattattaaagacaatttatggtttttgtc 11094299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 27739361 - 27739457
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  27739361 ataagtataatactccaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 27739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 31977894 - 31977799
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  31977894 ataagtataatactacaattgtttgaaacatac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 31977799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 32743990 - 32744086
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| | ||||||||    
T  32743990 ataagtataatactgcaattgtttcaaacgtaacaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatgatttttgtc 32744086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 39998920 - 39998824
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| || |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| | ||||||||    
T  39998920 ataagtataatattgtaattatttgaaacgtactaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatgatttttgtc 39998824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 15294757 - 15294663
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||| |||||||||    
T  15294757 ataagtataatac-gcaattgtttgaaatgtattaaaataatgattgaaacattcaaaatcaatatatattaataatgacaatttatggtttttgt 15294663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 40798472 - 40798386
Alignment:
Q  152 atactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  40798472 atactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 40798386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 40877652 - 40877747
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||||| |||| |||||| |||||||||    
T  40877652 ataagtataatactgtaattgtttgaaacgtaccaaaataatgattgaaacatacaaaatcaataaatattaattatgataatttatggtttttgt 40877747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 52514517 - 52514427
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  52514517 tataatactgcaattgtttgaaacgtac-aaaataatgattggaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 52514427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 55176227 - 55176322
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||| |||||||||||||  ||||||||    
T  55176227 ataagtataatactgcaattgtttgaaacgtatcaaaataatcattgaaacattcaaaatcaataaatattattaatgacaatttatagtttttgt 55176322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 27297037 - 27296949
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggttt 234  Q
    ||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  27297037 ataagtataatactgcaattgtttgaaacata---aaataatgattgaaacaatcaaaatctataaatattaataatgacaatttcaggttt 27296949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 4331647 - 4331739
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttt 235  Q
    |||| |||||| || |||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||    
T  4331647 ataaatataatcctacaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttt 4331739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 34542922 - 34543018
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| |||||||||||||||||| |||||||||| ||||||| ||||||||||| ||||||| ||| ||||||||| | ||||||||    
T  34542922 ataagtataatactccaattgtttgaaacgtaccaaaataatgagtgaaacattcaaaatcaataaatattattaaagacaatttatgatttttgtc 34543018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 4014726 - 4014631
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||||| ||||||| ||||||||||||| | |||||||    
T  4014726 ataaatataatactgcaattgtttgaaatgtaccaaaataatgatttaaacattcaaaatcaataaatattattaatgacaatttatgatttttgt 4014631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 19843251 - 19843337
Alignment:
Q  151 aatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  19843251 aatactgcaattgtttgaaacatac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 19843337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 21343305 - 21343399
Alignment:
Q  144 taagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||| ||| ||||||| ||||||||||||| ||||||||||    
T  21343305 taagtataatactgcgattgtttgaaacgtac-aaaataatgattaaaacattcaaaattaataaatattattaatgacaatttatggtttttgtc 21343399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 12898083 - 12897987
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||| ||| |||||||| |||||||| ||||||||||||||| || ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  12898083 ataagtataattctgaaattgtttaaaacgtaccaaaataatgattgaagcattcaaaatcaataaatattattaaagacaatttatggtttttgtc 12897987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 51753800 - 51753710
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||| ||||||| |||||| |||||| ||||||||||    
T  51753800 tataatactgcaattgtttgaaacatac-aaaataatgattgaaacattcataatcaataaatattattaatgataatttatggtttttgtc 51753710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 22935596 - 22935520
Alignment:
Q  152 atactgcaattgtttgaaacgtactaaaataatgattgaaac-aatcaaaatcaatgaatattaataatgacaattt 227  Q
    |||||||||||| |||||| |||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  22935596 atactgcaattgcttgaaatgtaccaaaataatgattgaaacaaatcaaaatcaataaatattaataatgacaattt 22935520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 28816798 - 28816888
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||      ||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  28816798 ataagtataatactgcaattgttt------taccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 28816888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 4330943 - 4330871
Alignment:
Q  166 tgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| || ||||||    
T  4330943 tgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggattttgt 4330871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 19341420 - 19341479
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaat 202  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  19341420 ataagtataatactgcaattgtttgaaacgtatcaaaataatgattgaaacattcaaaat 19341479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 14016610 - 14016673
Alignment:
Q  176 taaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||  ||||||||||    
T  14016610 taaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttttggtttttgtc 14016673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 19341484 - 19341561
Alignment:
Q  160 attgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||| |||| ||| ||||||||||    
T  19341484 attgtttgaaacgtac-aaaataatgatggaaacaatcaaaatcaataaatattattaattacaa-ttatggtttttgtc 19341561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 47443662 - 47443570
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttt 235  Q
    ||||||||||||| |   |||||||||| |||  |||||||||||| ||||||||||||||||| |||||||| ||||  ||||| |||||||    
T  47443662 ataagtataataccgtggttgtttgaaatgtagcaaaataatgatttaaacaatcaaaatcaataaatattaaaaatggtaatttcaggtttt 47443570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 8476050 - 8475995
Alignment:
Q  183 atgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  8476050 atgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 8475995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 42148515 - 42148429
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||||||| |||| ||||          |||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  42148515 ataagtataatactgcaattgtttgaaatgtacaaaaa----------aacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 42148429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 53642954 - 53642909
Alignment:
Q  177 aaaataatgattgaaacaatcaaaatcaatgaatattaataatgac 222  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||    
T  53642954 aaaataatgattgaaacaaccaaaatcaataaatattaataatgac 53642909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 53643602 - 53643654
Alignment:
Q  160 attgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatat 212  Q
    ||||||||||| |||| |||||||||||||||||||||||||| ||| |||||    
T  53643602 attgtttgaaatgtaccaaaataatgattgaaacaatcaaaattaataaatat 53643654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 33471613 - 33471573
Alignment:
Q  198 aaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  33471613 aaaatcaataaatattaataatgataatttaaggtttttgt 33471573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 54964847 - 54964885
Alignment:
Q  200 aatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  54964847 aatcaataaatattaataatgacaatataaggtttttgt 54964885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 23512279 - 23512183
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||| ||||||||||    
T  23512279 ataagtataatattgcaattgtttgaaacgtactaaaataatgattgaaacattcaaaatcaataaatattaataatgataatttatggtttttgtc 23512183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 30026101 - 30026196
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  30026101 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 30026196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 34798675 - 34798770
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  34798675 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 34798770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 2334934 - 2335030
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  2334934 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 2335030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 36314170 - 36314266
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  36314170 ataagtataatactgcaattctttgaaacgtaccaaaataattattgaaacattcaaaatcaataaatattaataatgacaatttatggtttttgtc 36314266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 44934140 - 44934044
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  44934140 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 44934044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 2712636 - 2712551
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattta 228  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  2712636 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaattta 2712551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 27501877 - 27501781
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  27501877 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 27501781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 32584339 - 32584243
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  32584339 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 32584243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 36314123 - 36314027
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||||||||| |||||| ||||||||||    
T  36314123 ataagtataatactacaattgtttgaaacgtaccaaaataatgattgaaacatttaaaatcaataaatattaataatgataatttatggtttttgtc 36314027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 38604038 - 38604134
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  38604038 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 38604134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 41858726 - 41858631
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  41858726 ataagtaaaatactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 41858631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 3695596 - 3695506
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  3695596 tataatactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 3695506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 45410110 - 45410015
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||| ||||||||||||| |||||||||    
T  45410110 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaatatcaataaatattattaatgacaatttatggtttttgt 45410015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 43263124 - 43263205
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaa 224  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  43263124 ataagtataatactgcaattgtttgaaacacaccaaaataatgattgaaacaatcaaaatcaataaatattaataatgacaa 43263205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 915465 - 915561
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  915465 ataagtataatactccaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 915561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 25994681 - 25994585
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||  |||||||| ||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  25994681 ataagtataatactgcaattgttttaaacgtatcaaaataattattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 25994585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 28617841 - 28617745
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  28617841 ataagtataatactccaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 28617745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 31185275 - 31185371
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| || |||||||    
T  31185275 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggattttgtc 31185371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 38133404 - 38133308
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||| ||||||| |||||||||| || ||||||||||    
T  38133404 ataagtataatactgcaattgtttgaaacataccaaaataattattgaaacattcaaaatcaataaatattattaatgacaatctatggtttttgtc 38133308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 41859045 - 41859141
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||| ||||||| ||||||||||||| ||||||||||    
T  41859045 ataaatataatactgcaattgtttgaaacgtaccaaaataattattgaaacatttaaaatcaataaatattattaatgacaatttatggtttttgtc 41859141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 43363050 - 43363146
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| || |||||| ||||||||||    
T  43363050 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagataatttatggtttttgtc 43363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 23512607 - 23512702
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| ||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||    
T  23512607 ataaatataaaactgcaattgtttgaaatgtaccaaaataatgattgaaacattcaaaatcaataaatattaataatgacaaattatggtttttgt 23512702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 45252438 - 45252533
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||| ||||||| ||| ||||||||| |||||||||    
T  45252438 ataagtataatactgcaattgtttgaaacgtaccaaaataattattgaaaaattcaaaatcaataaatattattaacgacaatttatggtttttgt 45252533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 3695950 - 3696043
Alignment:
Q  146 agtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||| ||||||||||||| | ||||||||    
T  3695950 agtataaaactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatgttattaatgacaatttatgatttttgtc 3696043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 36345235 - 36345139
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||| ||||||||||||||| |||| ||| |||||||||||||| ||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  36345235 ataagtatgatactgcaattgttttaaacatacaaaaataatgattgatacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 36345139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 43520119 - 43520036
Alignment:
Q  151 aatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttt 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||    
T  43520119 aatactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttt 43520036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 2712981 - 2713071
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||| |||| |||||||| ||||||||||    
T  2712981 tataatactgcaattgtttgaaacgtac-aaaataatgatggaaacattcaaaatcaataaatattattaattacaatttatggtttttgtc 2713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 5532818 - 5532913
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||| |||| ||||||| ||| ||||||| | |||||||||    
T  5532818 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaaccaataaatattattaaagacaattaatggtttttgt 5532913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 10749504 - 10749599
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| ||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||||||| ||||||||||||| || ||||||    
T  10749504 ataaatataatactgcaattgtttgaaatgtaccgaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggattttgt 10749599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 25994986 - 25995076
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  25994986 tataatactgcaattgtttgaaaaatac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 25995076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 34502977 - 34503060
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatt 226  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| ||||||| |||||| ||||    
T  34502977 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcagaatcaataaatattattaatgagaatt 34503060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 45410797 - 45410884
Alignment:
Q  151 aatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||| ||||||||||||| |||||||||    
T  45410797 aatacagcaattgtttgaaacgtaccaaaataatgattgaaatattcaaaatcaataaatattattaatgacaatttatggtttttgt 45410884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 21248398 - 21248320
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattt 227  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  21248398 tataatgctgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaattt 21248320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 4528361 - 4528285
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataat 219  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||||||||| ||||||||||| ||||||| ||||    
T  4528361 ataagtataatactgcaattgtttgatacgtaccaaaataataattgaaacattcaaaatcaataaatattattaat 4528285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 4529102 - 4529197
Alignment:
Q  143 ataagtataatactgcaattgttt-gaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||| | ||||||| ||||||||| |||||||| ||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  4529102 ataagtataatactacgattgtttagaaacgtac-aaaataataattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 4529197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 22960844 - 22960757
Alignment:
Q  151 aatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||| |||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||  |||||||||||| ||||||||||    
T  22960844 aatactacaattgtttgaaacgtac-aaaataatgattgaaactttcaaaatcaataaatattatcaatgacaatttatggtttttgtc 22960757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 4394869 - 4394964
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| ||||||| |||||||||||||||||||  |||||||||||||||| | ||||||| ||| |||||||||| ||| |||||| || ||||||    
T  4394869 ataaatataatattgcaattgtttgaaacgtatcaaaataatgattgaaatattcaaaattaataaatattaatattgataatttatgggttttgt 4394964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 30025243 - 30025160
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattta 228  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||||||  |||||||||| ||||||| |||||| ||||||    
T  30025243 ataagtataatattgcagttgtttgaaacgtac-aaaataatgattgaaacatacaaaatcaat-aatattattaatgataattta 30025160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 356
Target Start/End: Complemental strand, 26237543 - 26237501
Alignment:
Q  314 gacttccgcggcagttaactgtcgaaggacattttagtatttt 356  Q
    ||||||| | |||||||||||||||||||||||||||||||||    
T  26237543 gacttcctcagcagttaactgtcgaaggacattttagtatttt 26237501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 2416220 - 2416181
Alignment:
Q  317 ttccgcggcagttaactgtcgaaggacattttagtatttt 356  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  2416220 ttcctcggcagttaactgtcgaaggacattttggtatttt 2416181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 21406418 - 21406380
Alignment:
Q  200 aatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  21406418 aatcaataaatattaataatgacaatataaggtttttgt 21406380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 21800910 - 21800872
Alignment:
Q  200 aatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  21800910 aatcaataaatattaataatgacaatataaggtttttgt 21800872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 356
Target Start/End: Original strand, 27412349 - 27412412
Alignment:
Q  296 agttaactacagccgttt---gacttccgcggcagttaactgtcgaaggacattttagtatttt 356  Q
    ||||||||||||||| ||   ||||||| ||||||| | |||||||||||||||||| ||||||    
T  27412349 agttaactacagccggttttagacttcctcggcagtaagctgtcgaaggacattttaatatttt 27412412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 27657258 - 27657162
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  27657258 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 27657162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 143 - 280
Target Start/End: Original strand, 38265955 - 38266092
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtcnnn 242  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| | | ||||||||| |||||||||||||| |||||| ||||||||||       
T  38265955 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaaaatttaaaatcaataaatattaataatgataatttatggtttttgtcgca 38266054  T
Q  243 nnnntatcaggtttgaagtttccgcggcagttaaatgt 280  Q
         |  ||||||||||||||||||||||||||||||    
T  38266055 aaaaaaataggtttgaagtttccgcggcagttaaatgt 38266092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 5026768 - 5026672
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  5026768 ataagtataatactgcaattgtttgaaacgtaccaaaataacgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 5026672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 28564414 - 28564510
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  28564414 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 28564510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 29097705 - 29097801
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| ||||||| ||||||||||||| ||||||||||    
T  29097705 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaataaataaatattattaatgacaatttatggtttttgtc 29097801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 31512532 - 31512436
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||  |||||||||    
T  31512532 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatagtttttgtc 31512436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 35839603 - 35839507
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||| |||| ||||||||||    
T  35839603 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacattttatggtttttgtc 35839507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 38265640 - 38265548
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttt 235  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  38265640 ataagtataatactgcaattgtttgaaacgtaaaaaaataatgattgaaacattcaaaatcaataaatattaataatgacaatttatggtttt 38265548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 48000425 - 48000329
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  48000425 ataagtataatactgcaattgtttggaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 48000329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 25195472 - 25195376
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||| ||||| | ||||||||    
T  25195472 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgaccatttatgatttttgtc 25195376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 26833313 - 26833409
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||| |||||||||||||  |||||||||    
T  26833313 ataagtataatactgcaattgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatagtttttgtc 26833409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 30471384 - 30471476
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttt 235  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||    
T  30471384 ataagtataatactacaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttt 30471476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 47750755 - 47750659
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  47750755 ataagtataatactgcaattgttttaaacataccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 47750659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 32607004 - 32606909
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  32607004 ataagtataatattgcaattgtttgaaacgtaccaaaataatgatttaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 32606909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 29112571 - 29112476
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||| |||| |||||||| ||||||||||    
T  29112571 ataagtataatactgcaattgtttgaaacgtac-aaaataattattgaaacattcaaaatcaataaatattattaataacaatttatggtttttgtc 29112476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 29112954 - 29113050
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| |||| ||||||| ||||||||||||| | ||||||||    
T  29112954 ataagtataatactgcaattgtttgaaacgtaccaaaataattattgaaacattcaaaaacaataaatattattaatgacaatttatgatttttgtc 29113050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 42582858 - 42582954
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||||||| ||| ||||||||| ||||||||||    
T  42582858 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacatttaaaatcaataaatattattaaagacaatttatggtttttgtc 42582954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 46908289 - 46908385
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||| |||| ||||||| ||| ||||||||| ||||||||||    
T  46908289 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaaccaataaatattattaaagacaatttatggtttttgtc 46908385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 48901090 - 48900994
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  48901090 ataagtataatactgcaattgtttgaaacgtatcaaaataatgattgaaaaattcaaaatcaataaatattattaacgacaatttatggtttttgtc 48900994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 7953622 - 7953707
Alignment:
Q  150 taatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttt 235  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||    
T  7953622 taatactgcaattgtttgaaacataccaaaataatgattgaaacattcaaaattaataaatattaataatgacaatttatggtttt 7953707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 42794945 - 42795041
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| || |||||| ||||||||||    
T  42794945 ataagtataatactacaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagataatttatggtttttgtc 42795041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 49140941 - 49140845
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| |||||| || ||||||||||    
T  49140941 ataagtataatactgcaattatttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatatatggtttttgtc 49140845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 35839965 - 35840059
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||||||  ||||||||||| ||||||| ||||||||||||| |||||||||    
T  35839965 ataagtataatactacaattgtttgaaacgtac-aaaataataattgaaacgttcaaaatcaataaatattattaatgacaatttatggtttttgt 35840059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 34508791 - 34508702
Alignment:
Q  146 agtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggttttt 236  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||||| |||||||||| || |||||||    
T  34508791 agtataatactgcaattgtttgaaacgtac-aaaataaagattgaaacattcaaaatcaataaatattattaatgacaatatatggttttt 34508702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 38084073 - 38083978
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| |||||||||||||||||||| ||| || ||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  38084073 ataagtataatagtgcaattgtttgaaacgtaccaaatta-tgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 38083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 19073431 - 19073518
Alignment:
Q  151 aatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||| |||||||||||||||||| |||||||||||||||||| |||||||||||  |||||| |||||| |||||| ||||||||||    
T  19073431 aatactacaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaatagatattattaatgataatttatggtttttgtc 19073518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 30468659 - 30468585
Alignment:
Q  164 tttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  30468659 tttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 30468585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 12080680 - 12080599
Alignment:
Q  156 tgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||| |||||||| |||||||||||||||||| || |||||||| ||||||| ||||||||||||| |||||||||    
T  12080680 tgcaattgtttcaaacgtac-aaaataatgattgaaacattctaaatcaataaatattattaatgacaatttatggtttttgt 12080599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 12027552 - 12027480
Alignment:
Q  166 tgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| |||||||||    
T  12027552 tgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaacgacaatttatggtttttgt 12027480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 42024437 - 42024397
Alignment:
Q  198 aaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  42024437 aaaatcaataaatattaataatgacaatttaagatttttgt 42024397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 42025013 - 42025053
Alignment:
Q  198 aaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  42025013 aaaatcaataaatattaataatgataatttaaggtttttgt 42025053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 48901390 - 48901437
Alignment:
Q  165 ttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatatt 213  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  48901390 ttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatatt 48901437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 171
Target Start/End: Original strand, 25195824 - 25195852
Alignment:
Q  143 ataagtataatactgcaattgtttgaaac 171  Q
    |||||||||||||||||||||||||||||    
T  25195824 ataagtataatactgcaattgtttgaaac 25195852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 4014500 - 4014404
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  4014500 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 4014404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 28419992 - 28420087
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  28419992 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 28420087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 10425120 - 10425024
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  10425120 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 10425024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 2528888 - 2528793
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||| ||| |||||||||    
T  2528888 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaacttatggtttttgt 2528793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 289
Target Start/End: Original strand, 38779494 - 38779640
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtcnnn 242  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||| |||||||||||||| |||||| ||||||||||       
T  38779494 ataagtataatactgcaattgtttgaaatgtaccaaaataatgattgaaatattcaaaatcaataaatattaataatgataatttatggtttttgtcaaa 38779593  T
Q  243 nnnntatcaggtttgaagtttccgcggcagttaaatgttgaaatttt 289  Q
         |  ||||||||||||||| |||||||||| ||| ||| ||||    
T  38779594 aaaaaaaaaggtttgaagtttcctcggcagttaactgtcgaagtttt 38779640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 4014949 - 4015044
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||  |||||||||    
T  4014949 ataagtataatactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatagtttttgtc 4015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 29948045 - 29947949
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  29948045 ataagtataatactgcaattatttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 29947949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 30802812 - 30802908
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  30802812 ataagtataatactgcaattatttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 30802908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 39462077 - 39461981
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||| |||| |||||||| ||||||||||    
T  39462077 ataagtataatactacaattgtttgaaacgtactaaaataatgatttaaacattcaaaatcaataaatattattaataacaatttatggtttttgtc 39461981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 43329172 - 43329077
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  43329172 ataagtataatactgcaattgtttgaaacgtac-agaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 43329077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 37321398 - 37321303
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||| ||||||| || |||||||||| |||||||||    
T  37321398 ataagtataatactgcaattgttcgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattactgacaatttatggtttttgt 37321303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 39211086 - 39210992
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||  |||||||||    
T  39211086 ataagtataatactgcaattgtttgaaacgta-taaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttctggtttttgt 39210992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 39489452 - 39489357
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| |||||||||    
T  39489452 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgt 39489357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 40157326 - 40157421
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||| |||||| |||||||||    
T  40157326 ataaatataatactgcaattgtttgaaacgtacaaaaataatgattgaaacattcaaaatcaataaatattattaatgataatttatggtttttgt 40157421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 7779838 - 7779745
Alignment:
Q  145 aagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  ||||||| ||||||||||||| ||||||||||    
T  7779838 aagtataatactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaacaaatattattaatgacaatttatggtttttgtc 7779745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 7780178 - 7780274
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||| ||| || ||||||||||    
T  7780178 ataagtataatattgcaattgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatattaataatgataatgtatggtttttgtc 7780274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 9089277 - 9089372
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||| |||||||||||||  |||||||||    
T  9089277 ataagtataatactgcaattgtttgaaacgtac-aaaataatgattaaaacattcaaaatcaataaatattattaatgacaatttatagtttttgtc 9089372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 33002171 - 33002262
Alignment:
Q  146 agtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttg 237  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||    
T  33002171 agtataatactgcaatagtttgaaacataccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttg 33002262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 40969489 - 40969579
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  40969489 tataatattgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 40969579  T

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Target: chr2; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 36510657 - 36510753
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| || |||||| ||||||||||    
T  36510657 ataagtataatattgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagataatttatggtttttgtc 36510753  T

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Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 6233416 - 6233511
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||| ||||||||| ||||| || |||||||||||||||||| ||||||||||| ||||||| |||||||||||||  ||||||||    
T  6233416 ataagtataatactccaattgttttaaacgaaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatagtttttgt 6233511  T

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Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 29905688 - 29905593
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||| ||||||||||||||||| ||  |||||||||||||||||| | ||||||||| ||||||| ||||||||||||| |||||||||    
T  29905688 ataagtataattctgcaattgtttgaaacatatcaaaataatgattgaaacatttaaaatcaataaatattattaatgacaatttatggtttttgt 29905593  T

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Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 39211437 - 39211528
Alignment:
Q  147 gtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||  ||||||||||| ||||||| ||||||||||||| |||||||||    
T  39211437 gtataatactgcaattgttggaaacgtaccaaaatagtgattgaaacgttcaaaatcaataaatattattaatgacaatttatggtttttgt 39211528  T

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Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 39462397 - 39462487
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  39462397 tataatactgcaattgattgaaacatac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 39462487  T

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Target: chr2; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 2529250 - 2529342
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggttttt 236  Q
    |||||||||||||||||||||| |||||||||| |||||||| ||||||| | ||||||||||| ||||||| ||||||||||||| |||||||    
T  2529250 ataagtataatactgcaattgtatgaaacgtac-aaaataataattgaaatattcaaaatcaataaatattattaatgacaatttatggttttt 2529342  T

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Target: chr2; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 9088940 - 9088844
Alignment:
Q  143 ataagtataatact-gcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||| ||||||||  |||||||||    
T  9088940 ataagtataatacttgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaataacaatttatagtttttgtc 9088844  T

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Target: chr2; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 41272811 - 41272716
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| |||||||||||||||||||||||||||| |||||||||||| ||| | ||||||||||| ||||||| |||||| |||||| | |||||||    
T  41272811 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattaaaatattcaaaatcaatcaatattattaatgataatttatgatttttgt 41272716  T

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Target: chr2; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 2271068 - 2270992
Alignment:
Q  151 aatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattta 228  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||| ||||||||    
T  2271068 aatactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaataacaattta 2270992  T

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Target: chr2; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 33002181 - 33002089
Alignment:
Q  146 agtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| | ||| ||||| ||||||| |||||| |||||| ||||||||||    
T  33002181 agtattatactgcaattgtttgaaacgtac-aaaataatgattgaaacatttaaagtcaataaatattattaatgataatttatggtttttgtc 33002089  T

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Target: chr2; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 41273086 - 41273171
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattta 228  Q
    |||| |||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||| ||||||| ||||| |||||||    
T  41273086 ataaatataatactgcagttgtttgaaacgtaccataataatgattgaaacattcaaaatcaataaatattattaatggcaattta 41273171  T

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Target: chr2; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 40156614 - 40156542
Alignment:
Q  166 tgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  40156614 tgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 40156542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 39186593 - 39186662
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatat 212  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||    
T  39186593 ataagtataatactacaattgtttgaaacgtaccaaaataatgattgacacattcaaaatcaataaatat 39186662  T

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Target: chr2; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 15488027 - 15488107
Alignment:
Q  159 aattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||| |||||| |||||| ||||||||||    
T  15488027 aattgtttgaaacgtatcaaaataataattgaaacattcaaaatcaataaatattattaatgataatttatggtttttgtc 15488107  T

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Target: chr2; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 39186254 - 39186163
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatc-aaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||| || ||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||| |||| |||||||| ||||||||||    
T  39186254 tataataatgtaattgtttgaaacgtac-aaaataatgattgaaacattcaaaaatcaataaatattattaatcacaatttatggtttttgtc 39186163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 314 - 356
Target Start/End: Complemental strand, 17911194 - 17911152
Alignment:
Q  314 gacttccgcggcagttaactgtcgaaggacattttagtatttt 356  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  17911194 gacttcctcggcagttaactgtcgaaggacattttagtatttt 17911152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 10472783 - 10472827
Alignment:
Q  177 aaaataatgattgaaacaatcaaaatcaatgaatattaataatga 221  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  10472783 aaaataatgattgaaacaatcaaaatcaataaatactaataatga 10472827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 16741360 - 16741317
Alignment:
Q  196 tcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||    
T  16741360 tcaaaatcaataaatattaataatgacaatttatggtttttgtc 16741317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 35935363 - 35935303
Alignment:
Q  168 aaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattta 228  Q
    |||||||| |||||||||||| ||||| ||| ||||||| ||||||| |||| ||||||||    
T  35935363 aaacgtaccaaaataatgattcaaacattcagaatcaataaatattattaataacaattta 35935303  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 314 - 356
Target Start/End: Complemental strand, 24541757 - 24541715
Alignment:
Q  314 gacttccgcggcagttaactgtcgaaggacattttagtatttt 356  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  24541757 gacttcctctgcagttaactgccgaaggacattttagtatttt 24541715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 39895192 - 39895096
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  39895192 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 39895096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 4883509 - 4883413
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  4883509 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 4883413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 7943751 - 7943847
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| || |||||||    
T  7943751 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggattttgtc 7943847  T

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Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 21700685 - 21700781
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  21700685 ataagtataatactacaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 21700781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 7820684 - 7820775
Alignment:
Q  147 gtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||    
T  7820684 gtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacatttaaaatcaataaatattaataatgacaatttatggtttttgt 7820775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 18609389 - 18609294
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| || ||||||    
T  18609389 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggattttgt 18609294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 45780424 - 45780329
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| | |||||||    
T  45780424 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatgatttttgt 45780329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 49502333 - 49502248
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattta 228  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  49502333 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaattta 49502248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 6328735 - 6328831
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||| |||||||| | ||||||||    
T  6328735 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaataacaatttatgatttttgtc 6328831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 19914753 - 19914657
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  19914753 ataagtataatactgcaattgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 19914657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 26607007 - 26606911
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||||| ||||||||||||| ||||||||||    
T  26607007 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattaaaaatcaataaatattattaatgacaatttatggtttttgtc 26606911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 26769395 - 26769299
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  26769395 ataagtataatactgcaattgttttgaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 26769299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 30194705 - 30194609
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  30194705 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 30194609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 35254773 - 35254677
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  35254773 ataagtataatattgcaattgtttgaaacgtaccaaaataaagattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 35254677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 37991854 - 37991758
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| || |||||| ||||||||||    
T  37991854 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagataatttatggtttttgtc 37991758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 43012046 - 43011950
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  43012046 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 43011950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 44726599 - 44726503
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||| ||||||||||    
T  44726599 ataaatataatattgcaattgtttgaaacgtactaaaataatgattgaaacattcgaaatcaataaatattattaatgacaatttatggtttttgtc 44726503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 45780777 - 45780872
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  45780777 ataagtataatactgcaattgttttaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 45780872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 49661597 - 49661693
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  49661597 ataagtataatactgcaattgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 49661693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 51291424 - 51291520
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  51291424 ataagtataatactgcaattgtttaaaacttaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 51291520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 7820333 - 7820238
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||    
T  7820333 ataagtataatactataattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattaataatgataatttatggtttttgt 7820238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 146 - 228
Target Start/End: Complemental strand, 23442498 - 23442416
Alignment:
Q  146 agtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattta 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||    
T  23442498 agtataatactgcaattgtttgaaacgtactaaaataatgattgaaacattcaaaatcaataaatattattaatgataattta 23442416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 586399 - 586495
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  586399 ataagtataatactccaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 586495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 26607335 - 26607430
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  26607335 ataagtataatactacaattgtttgaaacgtac-aaaataataattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 26607430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 27649858 - 27649954
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||| ||| |||| |||||||| ||||||||||    
T  27649858 ataagtataatactgcaattgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaattttattaataacaatttatggtttttgtc 27649954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 50683431 - 50683336
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| || |||||||||| | ||||||||    
T  50683431 ataagtataatactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattagtgacaatttatgatttttgtc 50683336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 9618944 - 9618854
Alignment:
Q  149 ataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||| |||||| | ||||||||    
T  9618944 ataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgataatttatgatttttgtc 9618854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 641255 - 641158
Alignment:
Q  142 aataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||| |||| |||||||||| || |||||||| ||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  641255 aataagtataatactacaatggtttgaaacgaaccaaaataattattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 641158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 47652972 - 47652887
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattta 228  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||| ||| |||||||||    
T  47652972 ataagtataatactgcaattgtttgaaacgtcccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaattta 47652887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 46908604 - 46908509
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||| |||||| |||||| | |||||||    
T  46908604 ataagtataatactacaattgtttgaaacgtaccaaaataatgattgaagcattcaaaatcaataaatattattaatgataatttatgatttttgt 46908509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 46909429 - 46909515
Alignment:
Q  152 atactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||||| ||||||||||||| ||||||||||    
T  46909429 atactgcaattgtttgaaacgtac-aaaataatgattgaaacatttaaaatcaataaatattattaatgacaatttatggtttttgtc 46909515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 30287928 - 30287834
Alignment:
Q  145 aagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||| || |||||||| ||||||| ||| ||||||||| | ||||||||    
T  30287928 aagtataatactggaattgtttgaaacgtattaaaataatgattgaaacattcgaaatcaataaatattattaaagacaatttaggatttttgtc 30287834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 49875179 - 49875272
Alignment:
Q  145 aagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||||||| || ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  49875179 aagtaaaatactgcaattgtttgtaacgtac-aaaataatgattgaagcattcaaaatcaataaatattattaatgacaatttatggtttttgtc 49875272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 35255140 - 35255235
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||| |||  ||||||||  |||||||||    
T  35255140 ataagtataatactgcaattgtttgaaacgtaa-aaaataatgattgaaacattcaaaatcaataaatattattaacaacaatttatagtttttgtc 35255235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 35719434 - 35719358
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataat 219  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  35719434 ataattataatactgcaattgtttgaaatgtactaaaataaagattgaaactatcaaaatcaataaatattaataat 35719358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 49502679 - 49502769
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||| ||||||||||||||| |||| |||||||||||| ||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  49502679 tataatattgcaattgtttgaaatgtac-aaaataatgattcaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 49502769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 26770433 - 26770526
Alignment:
Q  145 aagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||| ||||||| |||||| |||||| ||||| ||||    
T  26770433 aagtataatactgcaattgtttgaaacatac-aaaataatgattgtaacattcaaaatcaataaatattattaatgataatttatggtttctgtc 26770526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 28456669 - 28456588
Alignment:
Q  157 gcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||| |||||| ||||||||||    
T  28456669 gcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgataatttatggtttttgtc 28456588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 27649483 - 27649389
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||| |||||| ||||||||||| ||||||| |||  |||||||| |||||||||    
T  27649483 ataagtataatactgcaactgtttgaatcgtac-aaaataatgatggaaacattcaaaatcaataaatattattaagtacaatttatggtttttgt 27649389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 51290546 - 51290464
Alignment:
Q  154 actgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttg 237  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||| |||||| |||||| ||||||||    
T  51290546 actgcaattgtttgaaacgtac-aaaataataattgaaacattcaaaatcaataaatattattaatgataatttatggtttttg 51290464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 39896404 - 39896489
Alignment:
Q  149 ataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttt 235  Q
    |||||||| |||||||||||||||||| ||||||||||| |||| | ||||||||||| | ||||| ||||||||||||| ||||||    
T  39896404 ataatactacaattgtttgaaacgtac-aaaataatgatcgaaatattcaaaatcaataagtattattaatgacaatttatggtttt 39896489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 45943653 - 45943693
Alignment:
Q  198 aaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  45943653 aaaatcaataaatattaataatgacaatttaaggtttttgt 45943693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 51461764 - 51461816
Alignment:
Q  186 attgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  51461764 attgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 51461816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 33081741 - 33081791
Alignment:
Q  177 aaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattt 227  Q
    |||||||||||||||| ||||||||||||| |||  |||||||||||||||    
T  33081741 aaaataatgattgaaaaaatcaaaatcaataaatgctaataatgacaattt 33081791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 49875165 - 49875112
Alignment:
Q  186 attgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||| ||||||||||| ||||||| |||| |||||||| ||||||||||    
T  49875165 attgaaacattcaaaatcaataaatattattaataacaatttatggtttttgtc 49875112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 7820651 - 7820683
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtac 175  Q
    |||||||||||||||||||||||||||||||||    
T  7820651 ataagtataatactgcaattgtttgaaacgtac 7820683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 3941075 - 3941113
Alignment:
Q  200 aatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  3941075 aatcaataaatattaataatgacaatataaggtttttgt 3941113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 46043654 - 46043618
Alignment:
Q  200 aatcaatgaatattaataatgacaatttaaggttttt 236  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  46043654 aatcaataaatattaataatgacaatataaggttttt 46043618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 4e-33; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 35651457 - 35651553
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  35651457 ataagtataatactgcaattgtttgaaatgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 35651553  T

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Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 42912368 - 42912273
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| | |||||||    
T  42912368 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatgatttttgt 42912273  T

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Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 18563774 - 18563870
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  18563774 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaatattcaaaatcaataaatattattaatgacaatttatggtttttgtc 18563870  T

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Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 20509383 - 20509475
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttt 235  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||    
T  20509383 ataagtataatactgcaattgtgtgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttt 20509475  T

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Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 41066111 - 41066015
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  41066111 ataagtataatactccaattgtttgaaacgtaccaaaataatgattgaatcattcaaaatcaatcaatattattaatgacaatttatggtttttgtc 41066015  T

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Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 3891763 - 3891667
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  3891763 ataagtataatactgcaattgtttaaaacgtagcaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 3891667  T

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Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 5099571 - 5099487
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattt 227  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  5099571 ataagtatactactgcaattgtttgaaacgtaccaaaataataattgaaacaatcaaaatcaatacatattaataatgacaattt 5099487  T

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Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 8679791 - 8679696
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  8679791 ataagtataatactgcaattgtttgaaacatac-aaaataataattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 8679696  T

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Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 8680082 - 8680178
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||| |||||||  |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  8680082 ataaatataatatggcaattgtttgaaacgtactaaaataattattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 8680178  T

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Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 20743323 - 20743236
Alignment:
Q  151 aatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  20743323 aatagtgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 20743236  T

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Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 22212205 - 22212115
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| || |||||||||||||| |||| |  |||||||| ||||||| |||||| |||||| ||||||||||    
T  22212205 tataatactgcaattgtttgaaacata-taaaataatgattgtaacatttgaaatcaataaatattattaatgataatttatggtttttgtc 22212115  T

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Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 41066437 - 41066527
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggttt 234  Q
    |||| |||||||||||||||||||||||||| | |||||||| ||| ||||| ||||||||||| ||||| | ||||||||||||| |||||    
T  41066437 ataaatataatactgcaattgtttgaaacgttc-aaaataataattaaaacattcaaaatcaataaatataattaatgacaatttatggttt 41066527  T

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Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 5655032 - 5654971
Alignment:
Q  296 agttaactacagccgtttgacttccgcggcagttaactgtcgaa-ggacattttagtatttt 356  Q
    |||||||||| | || |||||||||||| ||||||||||||||| ||| |||||||||||||    
T  5655032 agttaactaccgtcgattgacttccgcgacagttaactgtcgaagggatattttagtatttt 5654971  T

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Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 25983511 - 25983471
Alignment:
Q  198 aaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  25983511 aaaatcaataattattaataatgacaatttaaggtttttgt 25983471  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 5099799 - 5099846
Alignment:
Q  159 aattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaat 206  Q
    |||||||||||| |||  |||| |||||||||||||||||||||||||    
T  5099799 aattgtttgaaatgtatcaaaacaatgattgaaacaatcaaaatcaat 5099846  T

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Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 342
Target Start/End: Original strand, 13590665 - 13590712
Alignment:
Q  295 tagttaactacagccgtttgacttccgcggcagttaactgtcgaagga 342  Q
    ||||||||||| |||| || |||||||||||| |||||||||||||||    
T  13590665 tagttaactaccgccggttaacttccgcggcaattaactgtcgaagga 13590712  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 314 - 356
Target Start/End: Original strand, 4434354 - 4434396
Alignment:
Q  314 gacttccgcggcagttaactgtcgaaggacattttagtatttt 356  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  4434354 gacttcctcggcagttaactgtcaaagggcattttagtatttt 4434396  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 35281953 - 35281911
Alignment:
Q  197 caaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||    
T  35281953 caaaatcaataaatattattaatgacaatttatggtttttgtc 35281911  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 25984158 - 25984198
Alignment:
Q  198 aaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||| ||||| |||||||| ||||||||||||||||    
T  25984158 aaaatcaataaatatcaataatgataatttaaggtttttgt 25984198  T

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Target: chr4 (Bit Score: 73; Significance: 4e-33; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 11566667 - 11566763
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| | ||||||||    
T  11566667 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatgatttttgtc 11566763  T

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Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 21342928 - 21342833
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  21342928 ataagtataatactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 21342833  T

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Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 28320735 - 28320639
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  28320735 ataagtataatactgcaattgtttgaaacgtaccaaaataatgatggaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 28320639  T

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Target: chr4; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 36480024 - 36479928
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||| ||| ||||||||||    
T  36480024 ataagtataatactgcaattgtttgaaacgtacaaaaataatgattgaaacattcaaaatcaataaatattattaatgacaagttatggtttttgtc 36479928  T

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Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 16473522 - 16473615
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggttttt 236  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||    
T  16473522 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggttttt 16473615  T

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Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 21343214 - 21343307
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggttttt 236  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||    
T  21343214 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggttttt 21343307  T

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Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 14200843 - 14200747
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  14200843 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 14200747  T

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Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 32537742 - 32537646
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  32537742 ataagtataatattgcaattttttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 32537646  T

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Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 37295465 - 37295369
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||| |||||| |||||| ||||||||||    
T  37295465 ataagtataatactgcaattgtttgaaacgttccaaaataatgattgaaacattcaaaatcaataaatattattaatgaaaatttatggtttttgtc 37295369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 40833399 - 40833495
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  40833399 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 40833495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 50447285 - 50447189
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  50447285 ataagtataatactgcaattgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 50447189  T

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Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 51037248 - 51037344
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  51037248 ataagtataatactgtaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 51037344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 28234677 - 28234582
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||||| ||||||||||||| |||||||||    
T  28234677 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaacatttaaaatcaataaatattattaatgacaatttatggtttttgt 28234582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 46561820 - 46561915
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||    
T  46561820 ataagtataatactgcaattgtttgtaacataccaaaataatgattgaaacatttaaaatcaataaatattaataatgacaatttatggtttttgt 46561915  T

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Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 1735933 - 1736028
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  1735933 ataagtataataatgcaattgtttgaaacgtac-aaaataatgattgaaatattcaaaatcaataaatattattaatgacaatttatggtttttgtc 1736028  T

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Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 9655424 - 9655328
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| ||||||| ||||  ||||||| ||||||||||    
T  9655424 ataagtataatactgcaattgtttgaatcgtaccaaaataatgattgaaacattcaaaatcaataaatattattaataccaatttatggtttttgtc 9655328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 9655750 - 9655845
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||||| |||| ||||||||||    
T  9655750 ataagtttaatactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacagtttatggtttttgtc 9655845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 29307298 - 29307394
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||| ||| || |||||| ||||||||||    
T  29307298 ataagtataatactgcaattgtttgaaacttaccaaaataatgattgaaacattcaaaatcaataaatattattaaagataatttatggtttttgtc 29307394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 38368982 - 38369078
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  38368982 ataagtataatactccaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 38369078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 40963558 - 40963653
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||| |||||| |||||| ||||||||||    
T  40963558 ataagtataatactgcaattgtttgaaacgtac-aaaataatcattgaaacattcaaaatcaataaatattattaatgataatttatggtttttgtc 40963653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 46254242 - 46254338
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||| | ||| ||||||||| ||||||||||    
T  46254242 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatataattaaagacaatttatggtttttgtc 46254338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 55587633 - 55587537
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  55587633 ataagtataatactccaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 55587537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 16472761 - 16472666
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||| | |||||| |||||||||    
T  16472761 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaataaaaatttatggtttttgt 16472666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 28235378 - 28235473
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| ||||||| || ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  28235378 ataaatataatattgtaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 28235473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 36480378 - 36480468
Alignment:
Q  145 aagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggttttt 236  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||    
T  36480378 aagtataatactgcaattgtttgaaacatac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttacggttttt 36480468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 56566497 - 56566592
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||| |||||||| | |||||||    
T  56566497 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaattacaatttatgatttttgt 56566592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 28321964 - 28322053
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||| ||||| |||||||||    
T  28321964 tataatactgcaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgacgatttatggtttttgt 28322053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 1735602 - 1735505
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataa-tgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||| |||||||||||||||||| |||| || ||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  1735602 ataagtataatactacaattgtttgaaacgtaccaaaaaaaatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 1735505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 28157812 - 28157720
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggttttt 236  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||| ||||||||||||| |||||||    
T  28157812 ataaatataatactgcaattgtttgaaacgtac-aaaataataattgaaacattcaaaatcaataaatattattaatgacaatttatggttttt 28157720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 40240211 - 40240306
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  40240211 ataagtataatactgcaattgattgaaacatac-aaaataatgattgaaacattcaaaatcaataaatattattaacgacaatttatggtttttgtc 40240306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 42529070 - 42528975
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||  || ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  42529070 ataagtataatcatgtaattgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaatcaatattattaatgacaatttatggtttttgtc 42528975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 46561501 - 46561406
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||| | ||||||| ||| ||||||||| |||||||||    
T  46561501 ataagtataatactacaattgtttaaaacgtaccaaaataatgattgaaacattcaaaatcattaaatattagtaacgacaatttatggtttttgt 46561406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 35631393 - 35631303
Alignment:
Q  146 agtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggttttt 236  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||| | ||||||||| ||||||| |||||| |||||| |||||||    
T  35631393 agtataatactgcaattgtttgaaacgtactaaagtattgattgaaacattgaaaatcaataaatattattaatgataatttatggttttt 35631303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 45971641 - 45971730
Alignment:
Q  149 ataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||| |||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||||| |||||| | |||||||    
T  45971641 ataatactccaattgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatattaataatgataatttatgatttttgt 45971730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 56566015 - 56565921
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||| ||||||| ||| ||||||||| |||||||||    
T  56566015 ataaatataatactgcaattgtttgaaacgtaccaaaataataattgaaacatttaaaatcaataaatattattaa-gacaatttatggtttttgt 56565921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 7485460 - 7485551
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||| |||||||||||| ||| |||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||| ||| ||||||||||    
T  7485460 tataattctgcaattgtttaaaatgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaacttatggtttttgtc 7485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 40239858 - 40239787
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatatta 214  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  40239858 ataagtataatactgcaattgtttaaaacgtaccaaaataatgatcgaaacattcaaaatcaataaatatta 40239787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 46169049 - 46169139
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||| |||||||||||||||| ||| |||||||| ||||||| | ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  46169049 tataatattgcaattgtttgaaacttac-aaaataataattgaaatattcaaaatcaataaatattattaatgacaatttatggtttttgtc 46169139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 55704624 - 55704701
Alignment:
Q  161 ttgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||| ||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||| | |||||||    
T  55704624 ttgtttgaaacctaccaaaataattattgaaacattcaaaatcaataaatattaataatgacaatttatgatttttgt 55704701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 7088074 - 7087987
Alignment:
Q  151 aatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||| |||| | |||||||||||||||| | ||||||||| ||||||| |||||| |||||| ||||||||||    
T  7088074 aatactgcaattgtttgaaatgtac-agaataatgattgaaacatttaaaatcaataaatattattaatgataatttatggtttttgtc 7087987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 33812746 - 33812818
Alignment:
Q  162 tgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttt 235  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||| |||||| ||||||    
T  33812746 tgtttgaaacgtac-aaaataatgattgaaacattcaaaatcaataaatattattaatgaaaatttatggtttt 33812818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 32538221 - 32538278
Alignment:
Q  143 ataagtataatactgcaatt--gtttgaaacgtactaaaataatgattgaaacaatcaa 199  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||||    
T  32538221 ataagtataatactgcaatttcgtttgaaacgta-taaaataatgattgaaacattcaa 32538278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 55704331 - 55704264
Alignment:
Q  159 aattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaattta 228  Q
    |||||||||||| |||  | |||||||||| ||||| ||||||||||| |||||||||||||| ||||||    
T  55704331 aattgtttgaaatgta--acaataatgattaaaacattcaaaatcaataaatattaataatgaaaattta 55704264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 9473587 - 9473627
Alignment:
Q  198 aaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  9473587 aaaattaataaatattaataatgacaatttaaggtttttgt 9473627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 12376164 - 12376105
Alignment:
Q  180 ataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||| ||||| ||||||||||| ||||||| |||| |||||||| | ||||||||    
T  12376164 ataatgattcaaacattcaaaatcaataaatattattaataacaatttatgatttttgtc 12376105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 46165910 - 46165859
Alignment:
Q  187 ttgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||| ||||||||||| ||||||| ||||||||||| | |||||||||    
T  46165910 ttgaaacattcaaaatcaataaatattattaatgacaattaatggtttttgt 46165859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 17343337 - 17343375
Alignment:
Q  200 aatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  17343337 aatcaataaatattaataatgacaatataaggtttttgt 17343375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 36004205 - 36004263
Alignment:
Q  180 ataatgattg-aaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttg 237  Q
    |||||||||| ||| ||| ||||||||| |||||||||||||| ||||||| |||||||    
T  36004205 ataatgattggaaaaaattaaaatcaataaatattaataatgaaaatttaaagtttttg 36004263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 9473005 - 9472965
Alignment:
Q  198 aaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||  |||||||||||||||||||||||| ||||||    
T  9473005 aaaatcaacaaatattaataatgacaatttaaggattttgt 9472965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 17342287 - 17342247
Alignment:
Q  198 aaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||| |||||||||||||||||| |||| |||||||    
T  17342287 aaaatcaataaatattaataatgacaatataagatttttgt 17342247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 171
Target Start/End: Complemental strand, 46165932 - 46165904
Alignment:
Q  143 ataagtataatactgcaattgtttgaaac 171  Q
    |||||||||||||||||||||||||||||    
T  46165932 ataagtataatactgcaattgtttgaaac 46165904  T

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Target: scaffold1644 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold1644
Description:

Target: scaffold1644; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 1345 - 1250
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| || |||||||||| |||||||||    
T  1345 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattagtgacaatttatggtttttgt 1250  T

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Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 6760664 - 6760759
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| |||||||||    
T  6760664 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgt 6760759  T

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Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 117466 - 117370
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| ||| ||| ||||||||||||| ||||||||||    
T  117466 ataagtataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaattaataaatcttattaatgacaatttatggtttttgtc 117370  T

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Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 3177752 - 3177656
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||||||||||||||||| |  ||||||||||    
T  3177752 ataagtataatactgcaattgtttgaaatgtaccaaaataatgattgaaacattcaaaatcaataaatattaataatgacaatatctggtttttgtc 3177656  T

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Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 17337885 - 17337790
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  17337885 ataaatataatactgcaattgtttgaaacataccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 17337790  T

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Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 26350208 - 26350113
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| | |||||||    
T  26350208 ataaatataatactgcaattgtttgaaacgtattaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatgatttttgt 26350113  T

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Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 32396143 - 32396048
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| ||||||| ||||||||||||| |||||||||    
T  32396143 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaacattcataatcaataaatattattaatgacaatttatggtttttgt 32396048  T

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Target: chr6; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 2109778 - 2109683
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| |||||||||    
T  2109778 ataagtataatactgcaattgtttaaaacgtaacaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgt 2109683  T

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Target: chr6; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 26350907 - 26351002
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||||| ||||||||||||| | |||||||    
T  26350907 ataaatataatactgcaattgtttgaaacgtaccaaaataatgattgaaacatttaaaatcaataaatattattaatgacaatttatgatttttgt 26351002  T

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Target: chr6; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 32396697 - 32396792
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||| ||||||| || ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||    
T  32396697 ataaatataatattgtaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgt 32396792  T

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Target: chr6; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 455877 - 455972
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||| ||||||| |||| ||||||||  |||||||||    
T  455877 ataagtataatactgcaattgtttgaa-cgtaccaaaataatgattgaaacattcaaaatcaataaatattattaataacaatttatagtttttgtc 455972  T

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Target: chr6; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 32552714 - 32552619
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||| | ||||||||| ||| ||||||||||    
T  32552714 ataagtataatactgcaattgtttaaaacgtac-aaaataatgattgaaacattcaaaatcaataaatatcattaatgacaaattatggtttttgtc 32552619  T

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Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 13158624 - 13158529
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||||||| ||| || |||||| |||||||||    
T  13158624 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacatttaaaatcaataaatattattaaagataatttatggtttttgt 13158529  T

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Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 13163480 - 13163385
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||||||| ||| || |||||| |||||||||    
T  13163480 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacatttaaaatcaataaatattattaaagataatttatggtttttgt 13163385  T

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Target: chr6; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 15545965 - 15545865
Alignment:
Q  142 aataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatat---taataatgacaatttaaggtttttgt 238  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||   || |||||||||||||  ||||||||    
T  15545965 aataagtataatattgcaattgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatattagtattaatgacaatttatagtttttgt 15545866  T
Q  239 c 239  Q
    |    
T  15545865 c 15545865  T

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Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 8708199 - 8708103
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    ||||||||||||||||||||  ||||||| ||  |||||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  8708199 ataagtataatactgcaattaattgaaacataacaaaataatgattgaaacattcaaaatcaataaatattattaaagacaatttatggtttttgtc 8708103  T

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Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 35097399 - 35097491
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| |||||||||||||||||||  ||||||    || ||||| ||||||||||| ||||||| ||||||||||||| | ||||||||    
T  35097399 ataagtataatattgcaattgtttgaaacgtatcaaaata----ttaaaacattcaaaatcaataaatattattaatgacaatttatgttttttgtc 35097491  T

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Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 7678079 - 7677990
Alignment:
Q  148 tataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    |||||||| | ||||||||||||| ||| |||||||||||| ||| | ||||||||||| ||||||| |||||| |||||| |||||||||    
T  7678079 tataataccgtaattgtttgaaacatac-aaaataatgattaaaagattcaaaatcaataaatattattaatgataatttatggtttttgt 7677990  T

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Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 455569 - 455513
Alignment:
Q  183 atgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  455569 atgattgaaacattcaaaatcaataaatattattaatgacaatttatggtttttgtc 455513  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 29359071 - 29359005
Alignment:
Q  171 cgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttg 237  Q
    ||||| ||||||||||| |||| | | ||||||||| |||||||||||||| ||||||  |||||||    
T  29359071 cgtaccaaaataatgatcgaaatatttaaaatcaataaatattaataatgataatttatagtttttg 29359005  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 32629650 - 32629613
Alignment:
Q  18 ctcagcctattttgttttttatgcatatgcaacgttat 55  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  32629650 ctcagcctattttgttgtttatgcctatgcaacgttat 32629613  T

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Target: scaffold0016 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 69009 - 69105
Alignment:
Q  143 ataagtataatactgcaattgtttgaaacgtactaaaataatgattgaaacaatcaaaatcaatgaatattaataatgacaatttaaggtttttgtc 239  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||||||| ||| |||||||||  |||||||||    
T  69009 ataagtataatactgcaattgtttaaaacgtaccaaaataatgattgaaacatttaaaatcaataaatattattaaagacaatttatagtttttgtc 69105  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 232672 - 232634
Alignment:
Q  200 aatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  232672 aatcaataaatattaataatgacaatataaggtttttgt 232634  T

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Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 232759 - 232797
Alignment:
Q  200 aatcaatgaatattaataatgacaatttaaggtttttgt 238  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  232759 aatcaataaatattaataatgacaatataaggtttttgt 232797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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