View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8233_low_3 (Length: 596)

Name: NF8233_low_3
Description: NF8233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8233_low_3
NF8233_low_3
[»] chr4 (101 HSPs)
chr4 (5-302)||(16934422-16934719)
chr4 (5-297)||(16932068-16932360)
chr4 (32-299)||(22783052-22783319)
chr4 (32-297)||(22780687-22780952)
chr4 (1-297)||(9176749-9177035)
chr4 (1-297)||(18846923-18847211)
chr4 (104-297)||(9174491-9174684)
chr4 (108-297)||(11006590-11006781)
chr4 (152-295)||(51015042-51015185)
chr4 (33-240)||(11008877-11009075)
chr4 (112-289)||(37089727-37089906)
chr4 (180-297)||(7941133-7941251)
chr4 (112-297)||(36919940-36920125)
chr4 (180-297)||(11434769-11434887)
chr4 (112-297)||(3824926-3825112)
chr4 (112-297)||(5637822-5638006)
chr4 (112-297)||(38408993-38409179)
chr4 (1-89)||(9174421-9174509)
chr4 (152-295)||(22803127-22803270)
chr4 (112-297)||(31849952-31850138)
chr4 (156-299)||(36921893-36922035)
chr4 (112-289)||(24888598-24888776)
chr4 (152-297)||(22044783-22044930)
chr4 (1-89)||(5198390-5198478)
chr4 (1-89)||(24888766-24888854)
chr4 (1-89)||(11434925-11435013)
chr4 (1-89)||(22801137-22801225)
chr4 (1-89)||(22803009-22803097)
chr4 (1-85)||(40091690-40091774)
chr4 (1-89)||(47274697-47274785)
chr4 (1-89)||(48486289-48486377)
chr4 (1-62)||(44600113-44600174)
chr4 (1-89)||(22044665-22044753)
chr4 (112-297)||(48486113-48486299)
chr4 (1-89)||(51015216-51015304)
chr4 (1-62)||(619722-619783)
chr4 (33-89)||(11006548-11006604)
chr4 (1-89)||(22046960-22047048)
chr4 (1-62)||(6764836-6764897)
chr4 (1-62)||(40637071-40637132)
chr4 (4-89)||(9148221-9148308)
chr4 (1-89)||(5637740-5637832)
chr4 (180-274)||(22801262-22801356)
chr4 (2-85)||(24878963-24879046)
chr4 (1-89)||(36919860-36919950)
chr4 (18-89)||(38409169-38409240)
chr4 (8-89)||(24880421-24880502)
chr4 (112-211)||(5198300-5198400)
chr4 (159-297)||(9148054-9148192)
chr4 (1-62)||(17662509-17662574)
chr4 (1-89)||(31849874-31849962)
chr4 (159-289)||(52942869-52942999)
chr4 (3-62)||(8756527-8756586)
chr4 (3-62)||(47868398-47868457)
chr4 (3-61)||(18537748-18537806)
chr4 (1-89)||(37089646-37089737)
chr4 (33-89)||(3824880-3824936)
chr4 (1-62)||(8631694-8631759)
chr4 (1-62)||(14787706-14787769)
chr4 (1-61)||(19095880-19095940)
chr4 (1-61)||(24446854-24446914)
chr4 (1-89)||(7941289-7941379)
chr4 (18-89)||(36921787-36921858)
chr4 (1-60)||(37313341-37313400)
chr4 (1-62)||(2485147-2485209)
chr4 (152-210)||(22047078-22047135)
chr4 (1-62)||(5100994-5101055)
chr4 (1-62)||(14633317-14633377)
chr4 (13-62)||(25357634-25357683)
chr4 (1-62)||(36378289-36378350)
chr4 (1-61)||(12396120-12396180)
chr4 (1-61)||(12401082-12401142)
chr4 (213-297)||(22048491-22048575)
chr4 (1-62)||(24348211-24348276)
chr4 (1-61)||(38928453-38928513)
chr4 (1-57)||(41997494-41997550)
chr4 (7-62)||(16186118-16186173)
chr4 (1-60)||(33415762-33415821)
chr4 (1-89)||(52942721-52942810)
chr4 (1-60)||(56030443-56030502)
chr4 (1-55)||(19322701-19322755)
chr4 (1-62)||(15032811-15032872)
chr4 (1-62)||(16453306-16453367)
chr4 (13-62)||(22134917-22134966)
chr4 (127-204)||(47868288-47868365)
chr4 (1-61)||(3937484-3937543)
chr4 (9-61)||(12102088-12102140)
chr4 (1-61)||(38270261-38270321)
chr4 (3-61)||(18535106-18535164)
chr4 (152-193)||(619841-619882)
chr4 (1-61)||(2891314-2891375)
chr4 (4-61)||(6132871-6132928)
chr4 (252-297)||(8528918-8528963)
chr4 (127-204)||(16689303-16689380)
chr4 (33-62)||(22132706-22132735)
chr4 (33-62)||(47211053-47211082)
chr4 (33-62)||(53405124-53405153)
chr4 (128-200)||(4556422-4556494)
chr4 (252-300)||(47868192-47868240)
chr4 (33-61)||(52043737-52043765)
chr4 (152-192)||(52942841-52942881)
[»] chr7 (70 HSPs)
chr7 (32-297)||(1047238-1047503)
chr7 (19-297)||(2935070-2935349)
chr7 (18-297)||(9027396-9027687)
chr7 (18-297)||(22136878-22137169)
chr7 (18-297)||(40551905-40552196)
chr7 (18-297)||(22107867-22108158)
chr7 (18-297)||(40549627-40549918)
chr7 (180-297)||(40837144-40837261)
chr7 (152-297)||(3878322-3878467)
chr7 (112-298)||(27306582-27306768)
chr7 (180-297)||(26804345-26804462)
chr7 (152-298)||(25542280-25542425)
chr7 (1-89)||(35555-35643)
chr7 (1-89)||(44490-44578)
chr7 (1-89)||(1049570-1049658)
chr7 (1-89)||(27306504-27306592)
chr7 (112-297)||(35379-35565)
chr7 (1-89)||(22392399-22392487)
chr7 (1-62)||(31156186-31156247)
chr7 (152-297)||(44314-44459)
chr7 (1-87)||(25542459-25542544)
chr7 (13-62)||(1606423-1606472)
chr7 (183-300)||(1049699-1049816)
chr7 (152-297)||(18567363-18567508)
chr7 (152-297)||(31435441-31435586)
chr7 (1-83)||(18567545-18567627)
chr7 (1-83)||(31435322-31435404)
chr7 (3-89)||(40837019-40837105)
chr7 (1-62)||(7188496-7188557)
chr7 (1-62)||(13099751-13099812)
chr7 (1-62)||(42331274-42331335)
chr7 (1-89)||(26804499-26804583)
chr7 (1-89)||(3878497-3878591)
chr7 (1-62)||(22251817-22251878)
chr7 (1-61)||(21678020-21678080)
chr7 (1-61)||(25276095-25276155)
chr7 (3-62)||(20091818-20091877)
chr7 (13-62)||(1849918-1849967)
chr7 (18-59)||(7092471-7092512)
chr7 (1-59)||(7094697-7094759)
chr7 (1-62)||(22828908-22828969)
chr7 (1-61)||(11355212-11355272)
chr7 (1-61)||(20137384-20137444)
chr7 (1-61)||(21679981-21680041)
chr7 (3-62)||(30906327-30906386)
chr7 (1-60)||(37412403-37412462)
chr7 (1-62)||(443548-443609)
chr7 (1-61)||(4296210-4296271)
chr7 (1-59)||(7470297-7470359)
chr7 (1-59)||(7472255-7472317)
chr7 (1-62)||(3035670-3035735)
chr7 (1-62)||(11757177-11757242)
chr7 (1-62)||(20299407-20299472)
chr7 (1-60)||(24465503-24465563)
chr7 (1-61)||(24748548-24748608)
chr7 (1-62)||(38393935-38394000)
chr7 (1-61)||(39146262-39146322)
chr7 (1-61)||(44724533-44724593)
chr7 (1-60)||(3677235-3677293)
chr7 (1-60)||(21990106-21990164)
chr7 (1-55)||(24258423-24258477)
chr7 (33-62)||(7349586-7349615)
chr7 (33-62)||(18345490-18345519)
chr7 (33-62)||(28485515-28485544)
chr7 (33-62)||(38396239-38396268)
chr7 (127-204)||(40946167-40946244)
chr7 (33-62)||(43253831-43253860)
chr7 (33-61)||(9680768-9680796)
chr7 (18-62)||(40946277-40946321)
chr7 (1-62)||(48457602-48457667)
[»] chr3 (120 HSPs)
chr3 (1-298)||(50493675-50493983)
chr3 (7-297)||(53896475-53896754)
chr3 (33-297)||(38210067-38210320)
chr3 (1-297)||(6063719-6064006)
chr3 (33-240)||(25388654-25388850)
chr3 (28-285)||(5899471-5899717)
chr3 (28-297)||(5885983-5886242)
chr3 (112-297)||(22114656-22114842)
chr3 (112-297)||(18099521-18099707)
chr3 (180-297)||(35777163-35777280)
chr3 (112-296)||(5191374-5191559)
chr3 (1-89)||(35777317-35777405)
chr3 (1-90)||(6066069-6066159)
chr3 (13-106)||(6719396-6719489)
chr3 (166-297)||(18097291-18097422)
chr3 (180-298)||(38889756-38889875)
chr3 (112-302)||(10956378-10956568)
chr3 (212-297)||(7606878-7606963)
chr3 (180-297)||(11162891-11163008)
chr3 (1-89)||(11170300-11170388)
chr3 (3-89)||(26720444-26720530)
chr3 (168-289)||(10192401-10192521)
chr3 (112-298)||(32264394-32264581)
chr3 (1-89)||(1321337-1321425)
chr3 (1-89)||(3859424-3859512)
chr3 (1-89)||(5522888-5522976)
chr3 (1-89)||(11163046-11163134)
chr3 (152-297)||(26720268-26720413)
chr3 (108-174)||(6066144-6066210)
chr3 (1-106)||(38889918-38890024)
chr3 (168-289)||(10085481-10085601)
chr3 (112-297)||(1321161-1321347)
chr3 (1-89)||(5191549-5191637)
chr3 (182-297)||(11170145-11170260)
chr3 (1-89)||(15780756-15780844)
chr3 (1-89)||(22114578-22114666)
chr3 (1-89)||(48361943-48362031)
chr3 (180-239)||(6066195-6066254)
chr3 (180-297)||(6719532-6719651)
chr3 (1-62)||(4308554-4308615)
chr3 (112-195)||(3859350-3859434)
chr3 (112-297)||(5522966-5523152)
chr3 (1-89)||(24979603-24979691)
chr3 (1-89)||(45882835-45882923)
chr3 (112-204)||(10958674-10958767)
chr3 (1-89)||(18097173-18097262)
chr3 (1-62)||(35918222-35918283)
chr3 (1-62)||(51727279-51727340)
chr3 (1-85)||(12268239-12268323)
chr3 (1-62)||(1313333-1313394)
chr3 (1-89)||(18099443-18099531)
chr3 (1-62)||(43226009-43226070)
chr3 (1-62)||(43228214-43228275)
chr3 (1-89)||(10956300-10956388)
chr3 (1-89)||(10958596-10958684)
chr3 (1-89)||(32218991-32219079)
chr3 (1-89)||(32264312-32264404)
chr3 (1-60)||(51675028-51675087)
chr3 (1-55)||(6561740-6561794)
chr3 (3-89)||(24177175-24177261)
chr3 (252-297)||(25388618-25388663)
chr3 (1-62)||(53915769-53915830)
chr3 (1-61)||(1626956-1627016)
chr3 (252-300)||(3859314-3859362)
chr3 (10-62)||(53597164-53597216)
chr3 (18-89)||(10084683-10084754)
chr3 (18-85)||(10191603-10191670)
chr3 (11-89)||(18162560-18162639)
chr3 (3-61)||(28180948-28181006)
chr3 (252-297)||(6066246-6066291)
chr3 (1-62)||(13420445-13420506)
chr3 (1-62)||(23633383-23633444)
chr3 (1-62)||(28761701-28761762)
chr3 (222-297)||(32218836-32218912)
chr3 (1-62)||(51943294-51943355)
chr3 (1-62)||(53917937-53917998)
chr3 (1-61)||(880725-880785)
chr3 (1-61)||(28137568-28137628)
chr3 (1-61)||(43423736-43423796)
chr3 (1-61)||(47701868-47701928)
chr3 (230-297)||(48362119-48362186)
chr3 (1-60)||(27635900-27635959)
chr3 (3-61)||(3314608-3314666)
chr3 (150-204)||(45882752-45882806)
chr3 (127-204)||(4308648-4308725)
chr3 (1-62)||(4560538-4560599)
chr3 (1-62)||(6484308-6484369)
chr3 (1-62)||(4104168-4104233)
chr3 (1-61)||(5927037-5927097)
chr3 (1-61)||(28100314-28100374)
chr3 (1-61)||(36011751-36011811)
chr3 (1-61)||(53468728-53468788)
chr3 (1-61)||(53591119-53591179)
chr3 (1-60)||(3306724-3306783)
chr3 (1-60)||(6231374-6231433)
chr3 (23-62)||(25690651-25690690)
chr3 (3-61)||(31151271-31151330)
chr3 (1-60)||(43421688-43421747)
chr3 (533-575)||(1076815-1076857)
chr3 (533-575)||(1300163-1300205)
chr3 (31-89)||(13893289-13893347)
chr3 (13-62)||(27101472-27101519)
chr3 (33-62)||(455826-455855)
chr3 (33-62)||(458203-458232)
chr3 (33-62)||(746674-746703)
chr3 (33-62)||(10621847-10621876)
chr3 (33-62)||(25533357-25533386)
chr3 (127-204)||(27101627-27101704)
chr3 (13-62)||(29956587-29956636)
chr3 (13-62)||(30005742-30005791)
chr3 (31-60)||(31021450-31021479)
chr3 (127-204)||(35918316-35918393)
chr3 (33-62)||(42990205-42990234)
chr3 (127-200)||(43228108-43228181)
chr3 (1-61)||(890044-890104)
chr3 (26-62)||(27101558-27101594)
chr3 (1-61)||(28102275-28102335)
chr3 (10-62)||(39715393-39715445)
chr3 (33-61)||(47149205-47149233)
chr3 (9-61)||(54691854-54691906)
[»] chr5 (87 HSPs)
chr5 (1-297)||(31542442-31542739)
chr5 (21-297)||(15354777-15355065)
chr5 (21-297)||(15357053-15357341)
chr5 (1-297)||(31544798-31545084)
chr5 (24-297)||(10756960-10757245)
chr5 (25-297)||(10749505-10749767)
chr5 (18-298)||(23664833-23665125)
chr5 (18-298)||(23793462-23793754)
chr5 (18-297)||(23667109-23667400)
chr5 (1-240)||(31179646-31179897)
chr5 (33-297)||(34477379-34477632)
chr5 (18-297)||(38960334-38960604)
chr5 (33-297)||(34479740-34479972)
chr5 (112-297)||(38881845-38882031)
chr5 (180-297)||(2174680-2174797)
chr5 (180-307)||(25921874-25922002)
chr5 (152-289)||(4236378-4236515)
chr5 (180-305)||(39797841-39797966)
chr5 (18-117)||(23742057-23742157)
chr5 (1-89)||(25921748-25921836)
chr5 (152-297)||(16775897-16776042)
chr5 (1-89)||(2818611-2818699)
chr5 (215-300)||(18186504-18186590)
chr5 (180-297)||(659713-659829)
chr5 (1-89)||(4236545-4236633)
chr5 (233-297)||(21684905-21684969)
chr5 (109-206)||(21684811-21684909)
chr5 (3-88)||(12556200-12556285)
chr5 (1-89)||(38882021-38882110)
chr5 (1-87)||(16776075-16776162)
chr5 (1-62)||(20507737-20507798)
chr5 (1-89)||(2174835-2174923)
chr5 (215-297)||(20504369-20504452)
chr5 (1-89)||(21947943-21948030)
chr5 (1-89)||(31466253-31466341)
chr5 (1-89)||(36402603-36402690)
chr5 (3-62)||(26097676-26097735)
chr5 (3-61)||(36208524-36208582)
chr5 (17-62)||(3373332-3373377)
chr5 (1-62)||(10529374-10529435)
chr5 (1-62)||(39854427-39854487)
chr5 (1-61)||(20042994-20043054)
chr5 (33-89)||(21684768-21684824)
chr5 (215-297)||(36402762-36402845)
chr5 (1-62)||(18596590-18596651)
chr5 (252-297)||(31179888-31179933)
chr5 (1-62)||(4410000-4410065)
chr5 (1-61)||(17072827-17072887)
chr5 (1-61)||(20044954-20045014)
chr5 (215-297)||(20507918-20508001)
chr5 (215-297)||(21947770-21947853)
chr5 (1-61)||(25904047-25904107)
chr5 (3-62)||(26098528-26098587)
chr5 (180-297)||(31466379-31466496)
chr5 (35-89)||(39798004-39798058)
chr5 (127-204)||(4409890-4409967)
chr5 (1-62)||(6756437-6756498)
chr5 (1-62)||(40221465-40221526)
chr5 (1-61)||(34530941-34531001)
chr5 (1-56)||(6661457-6661512)
chr5 (3-62)||(37706057-37706116)
chr5 (162-242)||(659850-659929)
chr5 (1-58)||(10474598-10474655)
chr5 (1-59)||(18511487-18511547)
chr5 (127-204)||(39854317-39854394)
chr5 (1-62)||(41585981-41586042)
chr5 (215-297)||(12556358-12556441)
chr5 (1-62)||(18468950-18469015)
chr5 (1-61)||(24126800-24126860)
chr5 (1-59)||(18509593-18509652)
chr5 (11-61)||(2723911-2723961)
chr5 (215-287)||(2818763-2818836)
chr5 (1-60)||(18466625-18466688)
chr5 (33-62)||(2144899-2144928)
chr5 (127-204)||(6744894-6744971)
chr5 (127-204)||(6747137-6747214)
chr5 (33-62)||(10586782-10586811)
chr5 (33-62)||(15552178-15552207)
chr5 (33-62)||(25803959-25803988)
chr5 (33-62)||(27910388-27910417)
chr5 (33-62)||(27912473-27912502)
chr5 (33-61)||(1189921-1189949)
chr5 (26-62)||(6745004-6745040)
chr5 (26-62)||(6747247-6747283)
chr5 (33-61)||(29748285-29748313)
chr5 (1-61)||(31472888-31472948)
chr5 (128-204)||(42238047-42238123)
[»] chr8 (56 HSPs)
chr8 (33-297)||(43081722-43081986)
chr8 (33-297)||(43079347-43079614)
chr8 (308-578)||(23285864-23286134)
chr8 (327-578)||(23392453-23392704)
chr8 (1-297)||(18812668-18812953)
chr8 (1-297)||(18810483-18810768)
chr8 (1-297)||(44720617-44720903)
chr8 (112-297)||(27826782-27826968)
chr8 (112-297)||(27829093-27829279)
chr8 (152-289)||(14807556-14807693)
chr8 (152-298)||(12517420-12517566)
chr8 (1-89)||(14807723-14807811)
chr8 (180-276)||(3886322-3886419)
chr8 (1-89)||(4423990-4424078)
chr8 (1-89)||(2468373-2468461)
chr8 (1-85)||(3886193-3886277)
chr8 (112-289)||(15067785-15067963)
chr8 (1-89)||(27826958-27827046)
chr8 (1-89)||(27829269-27829357)
chr8 (490-580)||(23342025-23342115)
chr8 (490-580)||(23385019-23385109)
chr8 (112-297)||(15072506-15072692)
chr8 (1-85)||(15072686-15072770)
chr8 (1-89)||(28251842-28251930)
chr8 (159-289)||(28251988-28252118)
chr8 (180-298)||(4423834-4423952)
chr8 (1-89)||(15067953-15068041)
chr8 (1-62)||(181536-181597)
chr8 (1-62)||(26775200-26775261)
chr8 (1-62)||(43530123-43530188)
chr8 (1-85)||(12517299-12517385)
chr8 (1-62)||(13858759-13858820)
chr8 (1-62)||(14419466-14419527)
chr8 (1-61)||(14477276-14477336)
chr8 (1-61)||(33541663-33541723)
chr8 (1-61)||(35872653-35872713)
chr8 (7-62)||(31162212-31162267)
chr8 (1-62)||(1225165-1225226)
chr8 (13-62)||(22684953-22685002)
chr8 (1-62)||(27911014-27911075)
chr8 (1-62)||(27957433-27957494)
chr8 (1-62)||(41382672-41382733)
chr8 (1-62)||(41384744-41384804)
chr8 (1-61)||(21482322-21482382)
chr8 (1-61)||(25952521-25952581)
chr8 (1-61)||(27107172-27107232)
chr8 (1-61)||(5623013-5623073)
chr8 (18-62)||(6375988-6376032)
chr8 (1-62)||(32339304-32339369)
chr8 (1-60)||(36865538-36865598)
chr8 (1-62)||(15185985-15186046)
chr8 (33-62)||(15809214-15809243)
chr8 (33-62)||(17847527-17847556)
chr8 (33-62)||(24873494-24873523)
chr8 (33-62)||(28283532-28283561)
chr8 (1-61)||(30480778-30480838)
[»] chr1 (89 HSPs)
chr1 (1-297)||(47179428-47179717)
chr1 (1-297)||(47177078-47177366)
chr1 (1-289)||(16225895-16226171)
chr1 (23-297)||(23783238-23783533)
chr1 (1-270)||(16231368-16231605)
chr1 (112-297)||(51752104-51752291)
chr1 (112-297)||(13761577-13761763)
chr1 (112-297)||(51749778-51749965)
chr1 (112-277)||(6823643-6823810)
chr1 (112-297)||(20302198-20302385)
chr1 (180-297)||(6822775-6822893)
chr1 (112-297)||(10400183-10400369)
chr1 (153-298)||(15823285-15823430)
chr1 (192-298)||(20291279-20291386)
chr1 (112-289)||(28840426-28840604)
chr1 (1-89)||(51749955-51750043)
chr1 (1-89)||(51752281-51752369)
chr1 (157-289)||(28842241-28842373)
chr1 (3-89)||(41646836-41646922)
chr1 (1-89)||(6822931-6823019)
chr1 (1-89)||(13214997-13215085)
chr1 (1-89)||(13761753-13761841)
chr1 (1-89)||(15823462-15823550)
chr1 (1-89)||(28207343-28207431)
chr1 (1-89)||(38925755-38925843)
chr1 (1-62)||(20302402-20302463)
chr1 (1-89)||(10400105-10400193)
chr1 (1-89)||(47451564-47451652)
chr1 (1-89)||(6823800-6823889)
chr1 (1-61)||(2617460-2617520)
chr1 (1-89)||(39462435-39462523)
chr1 (18-89)||(28840594-28840665)
chr1 (1-85)||(28842413-28842499)
chr1 (1-83)||(14098247-14098329)
chr1 (3-89)||(30790673-30790759)
chr1 (1-62)||(49495476-49495537)
chr1 (1-60)||(25251552-25251611)
chr1 (1-62)||(18800846-18800907)
chr1 (1-62)||(20291400-20291461)
chr1 (13-62)||(24325599-24325648)
chr1 (1-62)||(28998530-28998591)
chr1 (1-62)||(29004246-29004307)
chr1 (1-61)||(11457752-11457812)
chr1 (1-61)||(14183863-14183923)
chr1 (13-59)||(15295137-15295183)
chr1 (3-61)||(17186407-17186465)
chr1 (215-295)||(38925915-38925996)
chr1 (127-204)||(13449919-13449996)
chr1 (9-85)||(3579903-3579979)
chr1 (215-297)||(47451405-47451488)
chr1 (1-61)||(50079098-50079158)
chr1 (1-61)||(50248849-50248909)
chr1 (1-60)||(17318838-17318897)
chr1 (1-60)||(18307054-18307113)
chr1 (1-60)||(25248791-25248850)
chr1 (112-190)||(28207421-28207500)
chr1 (112-210)||(30790749-30790848)
chr1 (153-298)||(39462257-39462402)
chr1 (112-264)||(13214854-13215007)
chr1 (228-297)||(14098441-14098510)
chr1 (1-62)||(6995977-6996038)
chr1 (1-59)||(21948464-21948526)
chr1 (1-62)||(31423151-31423212)
chr1 (1-59)||(39932017-39932077)
chr1 (9-62)||(48665114-48665167)
chr1 (1-62)||(2510601-2510666)
chr1 (10-62)||(16431044-16431096)
chr1 (1-61)||(18839531-18839591)
chr1 (1-61)||(31489859-31489919)
chr1 (215-297)||(49687301-49687384)
chr1 (1-61)||(50076949-50077009)
chr1 (3-62)||(42922177-42922236)
chr1 (1-62)||(8347546-8347607)
chr1 (1-62)||(9241362-9241424)
chr1 (9-55)||(26520403-26520449)
chr1 (3-61)||(50307826-50307884)
chr1 (1-62)||(2949508-2949569)
chr1 (33-62)||(9459732-9459761)
chr1 (33-62)||(9463559-9463588)
chr1 (33-62)||(12302819-12302848)
chr1 (1-62)||(16428596-16428657)
chr1 (3-61)||(26613517-26613577)
chr1 (33-62)||(31735834-31735863)
chr1 (33-62)||(43104102-43104131)
chr1 (33-62)||(46432037-46432066)
chr1 (33-62)||(47906207-47906236)
chr1 (1-60)||(8349325-8349385)
chr1 (3-62)||(15669669-15669729)
chr1 (1-61)||(17324009-17324069)
[»] chr6 (53 HSPs)
chr6 (17-297)||(26068590-26068882)
chr6 (17-297)||(26066319-26066611)
chr6 (28-297)||(33310954-33311235)
chr6 (13-297)||(29754983-29755279)
chr6 (28-297)||(33308685-33308966)
chr6 (152-297)||(14507569-14507716)
chr6 (150-298)||(8995254-8995402)
chr6 (150-298)||(9019701-9019849)
chr6 (152-297)||(19227803-19227948)
chr6 (33-240)||(4816552-4816749)
chr6 (112-289)||(11983382-11983558)
chr6 (33-104)||(20915665-20915736)
chr6 (1-62)||(12195790-12195851)
chr6 (1-89)||(11983304-11983392)
chr6 (1-89)||(30729103-30729191)
chr6 (1-87)||(14507450-14507536)
chr6 (1-89)||(1072152-1072240)
chr6 (1-89)||(15532956-15533044)
chr6 (1-89)||(15541415-15541503)
chr6 (152-299)||(15530516-15530663)
chr6 (1-62)||(28241596-28241657)
chr6 (1-89)||(19227683-19227771)
chr6 (3-54)||(14459042-14459093)
chr6 (1-62)||(1230524-1230585)
chr6 (4-89)||(15530400-15530485)
chr6 (1-89)||(8995430-8995518)
chr6 (1-89)||(9019877-9019965)
chr6 (215-298)||(1072312-1072396)
chr6 (1-62)||(17852520-17852581)
chr6 (1-61)||(3630139-3630199)
chr6 (1-61)||(13057173-13057233)
chr6 (1-61)||(24338723-24338783)
chr6 (1-89)||(32279948-32280035)
chr6 (1-61)||(32447591-32447651)
chr6 (3-62)||(3028127-3028186)
chr6 (4-62)||(15346369-15346427)
chr6 (127-204)||(26084818-26084895)
chr6 (1-61)||(25477253-25477313)
chr6 (112-211)||(30729181-30729281)
chr6 (252-298)||(4816740-4816787)
chr6 (13-56)||(19704862-19704905)
chr6 (1-62)||(3390357-3390418)
chr6 (13-62)||(26932857-26932906)
chr6 (1-61)||(3234006-3234065)
chr6 (3-62)||(12186345-12186405)
chr6 (18-62)||(18318004-18318048)
chr6 (4-55)||(17012029-17012080)
chr6 (1-59)||(3632213-3632271)
chr6 (33-62)||(2629197-2629226)
chr6 (33-62)||(30034914-30034943)
chr6 (1-61)||(13039733-13039793)
chr6 (10-54)||(13870705-13870749)
chr6 (1-61)||(22490618-22490678)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-297)||(5927-6212)
[»] chr2 (58 HSPs)
chr2 (18-297)||(36559067-36559358)
chr2 (18-297)||(45332384-45332675)
chr2 (18-194)||(36561344-36561532)
chr2 (152-289)||(19502405-19502542)
chr2 (112-297)||(24162565-24162752)
chr2 (159-297)||(36561539-36561677)
chr2 (152-298)||(19504739-19504885)
chr2 (112-289)||(27104523-27104701)
chr2 (112-297)||(21521048-21521234)
chr2 (180-289)||(43623968-43624077)
chr2 (1-89)||(24162487-24162575)
chr2 (1-89)||(27104691-27104779)
chr2 (152-297)||(42064231-42064376)
chr2 (112-294)||(6259168-6259351)
chr2 (1-89)||(13910319-13910407)
chr2 (1-89)||(19504620-19504708)
chr2 (1-89)||(40032333-40032421)
chr2 (1-89)||(42064407-42064495)
chr2 (1-89)||(6264420-6264508)
chr2 (1-85)||(22287611-22287695)
chr2 (1-62)||(45280260-45280321)
chr2 (1-89)||(22407684-22407772)
chr2 (215-297)||(40032503-40032586)
chr2 (1-89)||(43623843-43623931)
chr2 (1-60)||(19502286-19502345)
chr2 (112-205)||(13910397-13910491)
chr2 (1-62)||(42452702-42452763)
chr2 (1-61)||(22163222-22163282)
chr2 (1-62)||(12342685-12342746)
chr2 (1-62)||(37963202-37963263)
chr2 (1-89)||(6259090-6259178)
chr2 (1-89)||(18800577-18800665)
chr2 (1-61)||(19007560-19007620)
chr2 (1-61)||(31733040-31733100)
chr2 (180-289)||(6264546-6264655)
chr2 (1-61)||(17849037-17849097)
chr2 (112-297)||(22407762-22407948)
chr2 (1-61)||(28196557-28196617)
chr2 (1-89)||(21520968-21521058)
chr2 (18-60)||(20147040-20147082)
chr2 (1-58)||(3022086-3022143)
chr2 (1-62)||(22874061-22874122)
chr2 (18-62)||(5377725-5377769)
chr2 (1-61)||(11578379-11578439)
chr2 (1-61)||(11739835-11739895)
chr2 (1-61)||(14837193-14837253)
chr2 (13-89)||(35107192-35107268)
chr2 (1-62)||(42923784-42923847)
chr2 (1-60)||(15539750-15539809)
chr2 (25-60)||(20146906-20146941)
chr2 (33-62)||(17897549-17897578)
chr2 (33-62)||(23452548-23452577)
chr2 (33-62)||(35215903-35215932)
chr2 (13-62)||(40699229-40699278)
chr2 (33-61)||(20589581-20589609)
chr2 (33-89)||(28462593-28462649)
chr2 (1-53)||(34979854-34979906)
chr2 (1-61)||(44289343-44289403)
[»] scaffold0140 (2 HSPs)
scaffold0140 (18-297)||(21915-22206)
scaffold0140 (18-297)||(24190-24481)
[»] scaffold0127 (1 HSPs)
scaffold0127 (111-297)||(12868-13054)
[»] scaffold0250 (2 HSPs)
scaffold0250 (112-297)||(2629-2815)
scaffold0250 (1-89)||(2805-2893)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-89)||(14944-15032)
scaffold0131 (112-296)||(14768-14954)
[»] scaffold0025 (4 HSPs)
scaffold0025 (152-289)||(69688-69825)
scaffold0025 (180-289)||(73427-73536)
scaffold0025 (1-89)||(69566-69658)
scaffold0025 (1-89)||(73298-73390)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-89)||(3922-4010)
[»] scaffold0068 (3 HSPs)
scaffold0068 (233-297)||(28941-29005)
scaffold0068 (109-206)||(29001-29099)
scaffold0068 (33-89)||(29086-29142)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-62)||(1106-1167)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-62)||(41758-41819)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-62)||(11748-11809)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-62)||(51961-52024)
scaffold0005 (1-62)||(183915-183975)
[»] scaffold0133 (1 HSPs)
scaffold0133 (3-55)||(4773-4825)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-59)||(79140-79198)
[»] scaffold0057 (1 HSPs)
scaffold0057 (3-60)||(16924-16981)
[»] scaffold0511 (1 HSPs)
scaffold0511 (18-62)||(1988-2032)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-61)||(79812-79872)
[»] scaffold0224 (1 HSPs)
scaffold0224 (3-62)||(16095-16154)
[»] scaffold0045 (1 HSPs)
scaffold0045 (14-61)||(85184-85231)


Alignment Details
Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 5 - 302
Target Start/End: Original strand, 16934422 - 16934719
Alignment:
Q  5 tcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16934422 tcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaaca 16934521  T
Q  105 aaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16934522 aaactgtaacaaatctgctcccaaaaatacgttttatttttatccgacagcgcaccatcgtgccaggatgagaccccatcgtgccacgatttttccagtg 16934621  T
Q  205 ccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacatttat 302  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16934622 ccttgcccaaaaaactaaaacctccatcgtgccatgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcacatttat 16934719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 5 - 297
Target Start/End: Original strand, 16932068 - 16932360
Alignment:
Q  5 tcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaaca 104  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16932068 tcagccccctctatctcaaagtttgctttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaaca 16932167  T
Q  105 aaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16932168 aaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 16932267  T
Q  205 ccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16932268 ccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 16932360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 32 - 299
Target Start/End: Original strand, 22783052 - 22783319
Alignment:
Q  32 ttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaa 131  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22783052 ttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaa 22783151  T
Q  132 tacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22783152 tacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacctccat 22783251  T
Q  232 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacatt 299  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||    
T  22783252 cgtgccacgttgcccagctatcgtaccacgattctgcagaaacctgattttaagttaactctcacatt 22783319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 32 - 297
Target Start/End: Original strand, 22780687 - 22780952
Alignment:
Q  32 ttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaa 131  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22780687 ttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaa 22780786  T
Q  132 tacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 231  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22780787 tacgttttatttttatccgccagcgcaccatcgtgccacaatgagaccccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacctccat 22780886  T
Q  232 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||    
T  22780887 cgtgccacgttgcccagctatcgtaccacgattctgcagaaacctgattttaagttaactctcaca 22780952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 9176749 - 9177035
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| |||| | |    
T  9176749 tgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaatgtcttgcttaaaaactgtaacaaatctgctttaaatttat 9176848  T
Q  101 aacaaaactgtaacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttc 199  Q
    ||||||           ||||| |||||||||| |||| | |||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9176849 aacaaa-----------tctgcacccaaaaatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttc 9176937  T
Q  200 cagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9176938 cagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcctaaccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 9177035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 18847211 - 18846923
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||        
T  18847211 tgtttcaaccccctctatctcaaagtttgttttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgctttaaat---- 18847116  T
Q  101 aacaaaactgtaacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttc 199  Q
            |||||||||||||| |||||||||| |||| | |||||  |||  |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  18847115 -------ttgtaacaaatctgcacccaaaaatatgtttctgtttttccccgcgagcgcaccatcgtgccacgatgcgaccccatcgtaccacgatttttc 18847023  T
Q  200 cagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcag--aaacctgattttaagttaattctcac 296  Q
    |||| ||||| ||  |||||| |||||||| ||||||||||| | |||| |  |||||||||||||||||||  ||| ||||||||||||||| ||||||    
T  18847022 cagtaccttg-cctcaaaactgaaacctccaatcgtgccacgattcccaacaatcgtgccacgattctgcagaaaaatctgattttaagttaactctcac 18846924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 104 - 297
Target Start/End: Original strand, 9174491 - 9174684
Alignment:
Q  104 aaaactgtaacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccag 202  Q
    ||||||||||||||||||| |||||||||| |||| | |||||  | | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9174491 aaaactgtaacaaatctgcacccaaaaatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccag 9174590  T
Q  203 tgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  9174591 tgccttgcctaataaactaaaacctccatcgtgctacgttgcctagccgtcgtgccacgattctgcag-aacctgattttaagttaactctcaca 9174684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 108 - 297
Target Start/End: Original strand, 11006590 - 11006781
Alignment:
Q  108 ctgtaacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 206  Q
    ||||||||||||||| |||||||||| |||| | |||||  | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11006590 ctgtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 11006689  T
Q  207 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgca-gaaacctgattttaagttaattctcaca 297  Q
    ||||| |||||| | ||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||| |||||||    
T  11006690 ttgcctaaaaaattgaaacctccatcgtgccacgttgcccagcgatcgtgccacgattctgcataaaacctgattttaagttaactctcaca 11006781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 152 - 295
Target Start/End: Complemental strand, 51015185 - 51015042
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccg 251  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||     
T  51015185 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgcca 51015086  T
Q  252 tcgtgccacgattctgcagaaacctgattttaagttaattctca 295  Q
    || ||||||||||||||||||| ||||||||||||||| |||||    
T  51015085 tcatgccacgattctgcagaaatctgattttaagttaactctca 51015042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 33 - 240
Target Start/End: Original strand, 11008877 - 11009075
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaat 132  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||           ||||||||||||||| |||||||||    
T  11008877 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaat-----------ctgtaacaaatctgcacccaaaaat 11008965  T
Q  133 acgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctcca 230  Q
    | |||| | |||||  | | ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||| | |||||||||    
T  11008966 atgtttctgttttttgctgccagtgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaaattgaaacctcca 11009065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 112 - 289
Target Start/End: Original strand, 37089727 - 37089906
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| || |||||||||||| | || ||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |    
T  37089727 aacaaatctgcacctaaaaatacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcctcac 37089826  T
Q  211 ccaaaaaactaaaacctc-catcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 289  Q
    | ||||||||||||| || |||||||||||||||||  ||| |||||||||||||||||||||| |||||||||||||||    
T  37089827 ctaaaaaactaaaacatctcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaa 37089906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 7941251 - 7941133
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 278  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7941251 ccatcgtgccaccatttttccagtgccttgcctcaaaaaactgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctga 7941152  T
Q  279 ttttaagttaattctcaca 297  Q
    ||||||||||| |||||||    
T  7941151 ttttaagttaactctcaca 7941133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 36919940 - 36920125
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| || | ||  | | ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     
T  36919940 aacaaatctgcacccaaaaatacgtttctactattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgacttg- 36920038  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||  |||| | |||||||| ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| |||||||    
T  36920039 cctcaaaattgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgcag-aacctgattttaagttaactctcaca 36920125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 11434887 - 11434769
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 278  Q
    ||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  11434887 ccatcgtgccacgatttttccagtgtcttgcctcaaaaaactgaaacctccatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacctga 11434788  T
Q  279 ttttaagttaattctcaca 297  Q
    ||||||||||| |||||||    
T  11434787 ttttaagttaactctcaca 11434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 3824926 - 3825112
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||   || || |||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||    
T  3824926 aacaaatctgcacccaaaaatacgtttctgttattcgtcgccaacgcaccatcgtgccacgatgcgaccccattgtgccatgatttttccagtgctttgc 3825025  T
Q  211 ccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |  |||| || ||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||    
T  3825026 ctcaaaa-ctgaaacctccaatcgtgccatgttgcccagccatcgtgtcacgattctgcagaaacctgattttaagttaactctcaca 3825112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 5637822 - 5638006
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||| ||||||| | |||||  | | |||| ||||||| |||||||||| || ||||||||| || |||||||||||||||||||    
T  5637822 aacaaatctgcacccaaaa-tacgtttctgtttttcgctgccagctcaccatcatgccacgatgcgatcccatcgtgacatgatttttccagtgccttgc 5637920  T
Q  211 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |  |||| || ||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| |||||||    
T  5637921 ctcaaaa-ctgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctcaca 5638006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 38409179 - 38408993
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||| | |||||  ||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| |||     
T  38409179 aacaaatctgcactcaaaaatatgtttctgtttttcgccgccaacgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 38409081  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||  |||  | |||||||| ||||||||||| ||||||||  |||||||||||||||||||||| || |||||||||||| |||||||    
T  38409080 cctcaaacttgaaacctccaatcgtgccacgatgcccagcaatcgtgccacgattctgcagaaatctaattttaagttaactctcaca 38408993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9174421 - 9174509
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9174421 tgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaaactgtaacaaatctgc 9174509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 152 - 295
Target Start/End: Original strand, 22803127 - 22803270
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagcc 250  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||  |||||| |||||||| |||||||||||||||||||||    
T  22803127 cagcgcaccatcgtgccacgatgcgaccccatcgagccacgatttttccagtgcctt-tcctcaaaactgaaacctccaatcgtgccacgttgcccagcc 22803225  T
Q  251 gtcgtgccacgattctgcagaaacctgattttaagttaattctca 295  Q
     |||| ||||||||||  |||||  |||||||||||||| |||||    
T  22803226 atcgtaccacgattctatagaaatttgattttaagttaactctca 22803270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 31849952 - 31850138
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||| | |||||  | | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  31849952 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccaagatttttccagtgccttgc 31850051  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    ||  |||||| |||||||| ||||||||||||||||||||  ||||||||| ||| |||||| | | |||||||||||||| |||||||    
T  31850052 cc-caaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacaattcctgcag-atcttgattttaagttaactctcaca 31850138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 156 - 299
Target Start/End: Original strand, 36921893 - 36922035
Alignment:
Q  156 gcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcg 254  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||| |||| ||  |||||| |||||||| ||||||||| ||||||||||| |||    
T  36921893 gcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgacttg-cctcaaaactgaaacctccaatcgtgccatgttgcccagccatcg 36921991  T
Q  255 tgccacgattctgcagaaacctgattttaagttaattctcacatt 299  Q
    | |||||||| ||||| |||||||||||||||||| |||||||||    
T  36921992 taccacgattttgcag-aacctgattttaagttaactctcacatt 36922035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 112 - 289
Target Start/End: Complemental strand, 24888776 - 24888598
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||| | |||||  | | |||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  24888776 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgc 24888677  T
Q  211 ccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 289  Q
    |  |||   | ||||||||| ||||||||||||||| |||| ||||||||| |||||||||||| |||||||||||||||    
T  24888676 ctcaaact-tgaaacctccaatcgtgccacgttgcctagccatcgtgccacaattctgcagaaatctgattttaagttaa 24888598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 152 - 297
Target Start/End: Original strand, 22044783 - 22044930
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc--ccaaaaaactaaaacctccatcgtgccacgttgcccagc 249  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||  | |||||| | |||||||||||||||||||||||||  |    
T  22044783 cagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaaaaatgaaacctccatcgtgccacgttgcccttc 22044882  T
Q  250 cgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
      ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  22044883 aatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 22044930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5198478 - 5198390
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  5198478 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 5198390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24888854 - 24888766
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  24888854 tgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgc 24888766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11435013 - 11434925
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  11435013 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 11434925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22801137 - 22801225
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  22801137 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgc 22801225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22803009 - 22803097
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  22803009 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 22803097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 40091690 - 40091774
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 85  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||   ||||||||| || |||||||    
T  40091690 tgtttcagccccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaat 40091774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47274785 - 47274697
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  47274785 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgc 47274697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48486377 - 48486289
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  48486377 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 48486289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44600113 - 44600174
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44600113 tgtttcagccccctctatctcaaagtttgctttaatacaaggtctatatttatagtaaaagt 44600174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22044665 - 22044753
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||   ||||||||| || |||||||||||    
T  22044665 tgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 22044753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 48486299 - 48486113
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  | | ||||||||||| |||||||  || ||||||||||||||||||    ||||||| |||||    
T  48486299 aacaaatctgcacccaaaaatacgtttctgttattcgctgccagcgcaccattgtgccacattgtgaccccatcgtgccacgaaaaatccagtgacttgc 48486200  T
Q  211 ccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
    |  |||| || ||||||||| |||||||||||||| ||||| ||||||||||| ||||||||  ||||||||||||||||| |||||||    
T  48486199 ctcaaaa-ctgaaacctccaatcgtgccacgttgctcagccatcgtgccacgatttctgcag-gacctgattttaagttaactctcaca 48486113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51015304 - 51015216
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||   ||||||||| || |||||||||||    
T  51015304 tgtttcagccccctctatctccaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 51015216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 619722 - 619783
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  619722 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagt 619783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 11006548 - 11006604
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11006548 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 11006604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22046960 - 22047048
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |||||||||||||||||||   ||||||||| || |||||||||||    
T  22046960 tgtttcagccccctctatctccaagtttgctccgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 22047048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6764897 - 6764836
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  6764897 tgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 6764836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40637132 - 40637071
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  40637132 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtgaaagt 40637071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 9148308 - 9148221
Alignment:
Q  4 ttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||   ||||||||| || |||||||||||    
T  9148308 ttcagccccctctatctctcaaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 9148221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5637740 - 5637832
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||    |||||||||| | ||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  5637740 tgtttcagccccctctatctctctcaaagtttgctcttatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 5637832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 22801262 - 22801356
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaac 274  Q
    |||||||||||||||||||||||| |||||||  |||| || ||||||||| ||||| ||||||||||| || |||||||||||||||| ||||||    
T  22801262 ccatcgtgccacgatttttccagttccttgcctcaaaa-ctgaaacctccaatcgtgtcacgttgcccaaccatcgtgccacgattctgtagaaac 22801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 24879046 - 24878963
Alignment:
Q  2 gtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 85  Q
    |||||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||   ||||||||| || |||||||    
T  24879046 gtttcagccccctctatctccaagtttactcggatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaat 24878963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36919860 - 36919950
Alignment:
Q  1 tgtttcagccccctctatct--caaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||| |||||  |||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  36919860 tgtttcagccccctatatctatcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 36919950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 38409240 - 38409169
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  38409240 tctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 38409169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 24880502 - 24880421
Alignment:
Q  8 gccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||| |||||| ||  |||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  24880502 gccccctctatctccaagtttactccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 24880421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 5198400 - 5198300
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||| | |||||  | | ||||||||||||||||||||||| || |||||||||||||||||||||||| || ||||    
T  5198400 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagagctttgc 5198301  T
Q  211 c 211  Q
    |    
T  5198300 c 5198300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 297
Target Start/End: Complemental strand, 9148192 - 9148054
Alignment:
Q  159 ccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgc 257  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||  |||  | |||||||| |||| |||||||||||||||  |||| |    
T  9148192 ccatcgtgccacgatgcaaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgcgccacgttgcccagcaatcgtac 9148094  T
Q  258 cacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||| ||| || | | |||||||||||||| |||||||    
T  9148093 cacgattcctgaag-atcttgattttaagttaactctcaca 9148054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17662509 - 17662574
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||||    
T  17662509 tgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 17662574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31849874 - 31849962
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||  |||||||| |||||||||  |||||||| ||||||||||   ||||||||| || |||||||||||    
T  31849874 tgtttcagccccctctatctcctagtttgctctgatacaagacctatatttctagtaaaagtatcgcttaaaatttggaacaaatctgc 31849962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 289
Target Start/End: Original strand, 52942869 - 52942999
Alignment:
Q  159 ccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgc 257  Q
    ||||||||||||| || ||||||||||||||||||  | | ||||| ||||||  |||  || ||||||||| ||||||||||||||||| || ||||||    
T  52942869 ccatcgtgccacgttgtgaccccatcgtgccacgaaatattcagtgacttgcctcaaag-ctgaaacctccaatcgtgccacgttgcccaaccatcgtgc 52942967  T
Q  258 cacga-ttctgcagaaacctgattttaagttaa 289  Q
    ||||| || |||| |||||||||||||||||||    
T  52942968 cacgatttttgca-aaacctgattttaagttaa 52942999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 8756527 - 8756586
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||||    
T  8756527 tttcagccccttctatctcaaggtttactctgatacaaggtctatatttatagtaaaagt 8756586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 47868457 - 47868398
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  47868457 tttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtgaaagt 47868398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 18537748 - 18537806
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| |||| || ||||||||| |||||||||||||||||||    
T  18537748 tttcagccccctctatctcaatgtttactctgatacaagatctatatttatagtaaaag 18537806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37089646 - 37089737
Alignment:
Q  1 tgtttcagccccctctatctca---aagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||    ||||||    ||||||||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  37089646 tgtttcagccccctctatctctctcaagtttagcctgatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgc 37089737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 3824880 - 3824936
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  3824880 tgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgc 3824936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8631694 - 8631759
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    ||||||||||||||||||| ||||||||||||||| |||||    
T  8631694 tgtttcagccccctctatctctctcaaagtttgctttgatacaaagtctatatttatagtgaaagt 8631759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14787706 - 14787769
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||  |||||||  | ||||||||||||||||||||||||||||||    
T  14787706 tgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaagt 14787769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19095940 - 19095880
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  19095940 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 19095880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24446854 - 24446914
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  24446854 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 24446914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7941379 - 7941289
Alignment:
Q  1 tgtttcagccccctctatctcaaa--gtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||     ||||||| |||||||| |||||||||||||||||||||   ||||||||| || |||||||||||    
T  7941379 tgtttcagccccctctatctctcccggtttgctctgatacaacgtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 7941289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 36921787 - 36921858
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||   ||||||||| || |||||||||||    
T  36921787 tctcaaagtttactctgatacaaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgc 36921858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37313341 - 37313400
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| |||||||||||   |||||||||||||||||    
T  37313341 tgtttcagccccctctatctcaaggtttactttgatacaaaacctatatttatagtaaaa 37313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2485147 - 2485209
Alignment:
Q  1 tgtttcagccccct-ctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  2485147 tgttttagcccccttctagctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 2485209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 22047078 - 22047135
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    |||| |||||||||||||||||| || |||||||||||| |||||||||||||||||||    
T  22047078 cagcacaccatcgtgccacgatgcgatcccatcgtgcca-gatttttccagtgccttgc 22047135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5101055 - 5100994
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||| |||||||||||||| |||| |  |||| |||||||||||||||||||||||||    
T  5101055 tgtttcagtcccctctatctcaaggtttaccctgattcaaggtctatatttatagtaaaagt 5100994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14633377 - 14633317
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||  ||||||||||||||| || |||||||||||||||||||||||| |||||    
T  14633377 tgtttcagccct-tctatctcaaagtttactctgatacaaggtctatatttatagtgaaagt 14633317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 25357683 - 25357634
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  25357683 ctctctctcaaggtttactttgatacaaggtctatatttatagtaaaagt 25357634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36378350 - 36378289
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||||| ||||  | |||||||| |||||||||||||||||||||    
T  36378350 tgtttcagccccgtctatctcaaggtttattctgatacaaagtctatatttatagtaaaagt 36378289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12396120 - 12396180
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||| |||||||||| |||| | || |||||| ||||||||||||||||||||    
T  12396120 tgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaag 12396180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12401082 - 12401142
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||| |||||||||| |||| | || |||||| ||||||||||||||||||||    
T  12401082 tgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaag 12401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 22048491 - 22048575
Alignment:
Q  213 aaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||| |||||||||||||||||||||||||  |  |||||||||||||||   | | | |||||||||||||| |||||||    
T  22048491 aaaaaactgaaacctccatcgtgccacgttgcccttcaatcgtgccacgattcttgcggatcttgattttaagttaactctcaca 22048575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24348276 - 24348211
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||   |||||||||||||||||||||||||||||||    
T  24348276 tgtttcagccccctctatctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagt 24348211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38928453 - 38928513
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || | |||||| | ||||||||||||||||||    
T  38928453 tgtttcagccccctctatctcaaggtttactctaatacaaagcctatatttatagtaaaag 38928513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41997550 - 41997494
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagta 57  Q
    |||||||||||||| |||||||| |||| || |||||||| ||||||||||||||||    
T  41997550 tgtttcagccccctttatctcaaggtttactctgatacaaagtctatatttatagta 41997494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 16186118 - 16186173
Alignment:
Q  7 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| |||||| |||| || ||||||||||| ||||||||||||||||||    
T  16186118 agccccctctctctcaaggtttactctgatacaaggtttatatttatagtaaaagt 16186173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33415762 - 33415821
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| || |||||||| | |||||||| ||||||||    
T  33415762 tgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttgtagtaaaa 33415821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 52942721 - 52942810
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgata--caaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||| |||||||||||||||  | |||||  ||||||||||||||||||| |||||  | |||||||| || |||||||||||    
T  52942721 tgtttcagcccc-tctatctcaaagtttagtctgatatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgc 52942810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 56030502 - 56030443
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||| |||||||||| |||| || |||||||| | |||||||||||||||||    
T  56030502 tgtttcagccccttctatctcaaggtttactctgatacaaagcctatatttatagtaaaa 56030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19322755 - 19322701
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    ||||||| ||||||||||||||| |||| || ||||||||| |||||||||||||    
T  19322755 tgtttcatccccctctatctcaaggtttactctgatacaagatctatatttatag 19322701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15032811 - 15032872
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| |||||||| |||| || || ||| | |||||||||||||||||||||    
T  15032811 tgtttcagccccctttatctcaaggtttactctggtaccaagtctatatttatagtaaaagt 15032872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16453367 - 16453306
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||   ||||||| |||||||| | |||||||||||| ||||||    
T  16453367 tgtttcagccccctctatctctcggtttgctctgatacaaagcctatatttatagcaaaagt 16453306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 22134917 - 22134966
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||   |||||||||||||||||||||||||||||||    
T  22134917 ctctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagt 22134966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 47868365 - 47868288
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||||||||||||||    | ||||| |||||| |||||| ||| || |||||| ||||||||||||||||    
T  47868365 aaaaatacgttttatttttatcttcaatcgcactatcgtggcacgattagatccaatcgtggcacgatttttccagtg 47868288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3937484 - 3937543
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||| ||||||||||||| |||| || ||||| || ||||||||||||||||||||    
T  3937484 tgtttcagctccctctatctcaaggtttactctgata-aaagtctatatttatagtaaaag 3937543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 12102140 - 12102088
Alignment:
Q  9 ccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||| ||||  | ||||||||| |||||||||||||||||||    
T  12102140 ccccctctatctcaaggttttatctgatacaagatctatatttatagtaaaag 12102088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38270261 - 38270321
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| | |||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  38270261 tgtttcagcctcttctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 38270321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 18535106 - 18535164
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| |||| || |||  | |||||||||||||| |||||||    
T  18535106 tttcagccccctctatctcaaggtttactctgaatcgaggtctatatttattgtaaaag 18535164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 619841 - 619882
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacga 193  Q
    ||||||||||| |||||||| || ||||||||||||||||||    
T  619841 cagcgcaccattgtgccacgttgcgaccccatcgtgccacga 619882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2891375 - 2891314
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgat-acaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||| || |||| |  |||| |||| ||||||||||||||||||||    
T  2891375 tgtttcagccccctctatcttaaggtttacactgattacaatgtctatatttatagtaaaag 2891314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 6132928 - 6132871
Alignment:
Q  4 ttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||| |||||||||||| |||| |   ||||||| ||||||||||||||||||||    
T  6132928 ttcagcctcctctatctcaatgtttacaccgatacaatgtctatatttatagtaaaag 6132871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 8528963 - 8528918
Alignment:
Q  252 tcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||| ||||||||| |||||| ||||||||||||||| |||||||    
T  8528963 tcgtgacacgattctccagaaatctgattttaagttaactctcaca 8528918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 16689303 - 16689380
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    |||||||||||||  ||||||||   | ||||||||||||||||| || ||   ||||||| ||||||||||||||||    
T  16689303 aaaaatacgtttttattttatcctcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 16689380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 22132706 - 22132735
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  22132706 tgatacaaggtctatatttatagtaaaagt 22132735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 47211053 - 47211082
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  47211053 tgatacaaggtctatatttatagtaaaagt 47211082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 53405153 - 53405124
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  53405153 tgatacaaggtctatatttatagtaaaagt 53405124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 4556422 - 4556494
Alignment:
Q  128 aaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 200  Q
    |||||||||||||||||||||    | ||||||||||||||||| || ||   ||||||| ||||||||||||    
T  4556422 aaaatacgttttatttttatcttcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttcc 4556494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 47868240 - 47868192
Alignment:
Q  252 tcgtgccacgattctgcagaaacctgattttaagttaattctcacattt 300  Q
    ||||| ||||||||| |||||  ||||||||||||||| ||||||||||    
T  47868240 tcgtggcacgattctccagaattctgattttaagttaactctcacattt 47868192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 52043737 - 52043765
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  52043737 tgatacaaggtctatatttatagtaaaag 52043765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 52942841 - 52942881
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacg 192  Q
    ||||||| |||||||||||| || |||||||||||||||||    
T  52942841 cagcgcatcatcgtgccacgttgtgaccccatcgtgccacg 52942881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 32 - 297
Target Start/End: Original strand, 1047238 - 1047503
Alignment:
Q  32 ttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaa 131  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1047238 ttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaa 1047337  T
Q  132 tacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1047338 tacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 1047437  T
Q  232 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1047438 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 1047503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 19 - 297
Target Start/End: Complemental strand, 2935349 - 2935070
Alignment:
Q  19 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaa-ctgtaacaaa 117  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||    
T  2935349 ctcagagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatctgtaacaaaaactgtaacaaa 2935250  T
Q  118 tctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaa 217  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2935249 tctgctctcaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaa 2935150  T
Q  218 actaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  2935149 actaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 2935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 9027396 - 9027687
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  9027396 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 9027495  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9027496 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc 9027595  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  9027596 cttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 9027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 22137169 - 22136878
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  22137169 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 22137070  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22137069 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc 22136970  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  22136969 cttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 22136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 40552196 - 40551905
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  40552196 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 40552097  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40552096 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc 40551997  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  40551996 cttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 40551905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 22108158 - 22107867
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  22108158 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 22108059  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22108058 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc 22107959  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||| ||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  22107958 cttgcccaaaaaactaaaacctgcatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 22107867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 40549918 - 40549627
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  40549918 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 40549819  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40549818 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc 40549719  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||| ||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  40549718 cttgcccaaaaaactaaaacctgcatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 40549627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 180 - 297
Target Start/End: Original strand, 40837144 - 40837261
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgat 279  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||    
T  40837144 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctccatcgtgccacgttgtccgaccatcgtgccacgattctgcagaaacctgat 40837243  T
Q  280 tttaagttaattctcaca 297  Q
    |||||||||| |||||||    
T  40837244 tttaagttaactctcaca 40837261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 152 - 297
Target Start/End: Complemental strand, 3878467 - 3878322
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagcc 250  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||  |||   | ||||||||| ||||||||||||||||||||    
T  3878467 cagcgtaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaact-tgaaacctccaatcgtgccacgttgcccagcc 3878369  T
Q  251 gtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
     |||||||||||||||||||||| ||||||||||||||| |||||||    
T  3878368 atcgtgccacgattctgcagaaatctgattttaagttaactctcaca 3878322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 112 - 298
Target Start/End: Original strand, 27306582 - 27306768
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  | |  |||||||||||||||||||| | |||||||||||||||||||||||||| || ||||     
T  27306582 aacaaatctgcacccaaaaatacgtttctgttattcgctgctagcgcaccatcgtgccacgaagcgaccccatcgtgccacgatttttccaatgacttg- 27306680  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacat 298  Q
    ||  |||||| |||||||| |||||||||||||| |||||| ||||||||||||| |||| |||||| |||||||||||| ||||||||    
T  27306681 cctcaaaactgaaacctccaatcgtgccacgttgtccagccatcgtgccacgattttgca-aaaccttattttaagttaactctcacat 27306768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 26804462 - 26804345
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 278  Q
    |||||||||||||||||||||| |||||||||  |||| || ||||||||| |||| ||||||||||||||| |||||||||||||||| ||||||||||    
T  26804462 ccatcgtgccacgatttttccactgccttgcctcaaaa-ctgaaacctccaatcgtaccacgttgcccagccatcgtgccacgattctgtagaaacctga 26804364  T
Q  279 ttttaagttaattctcaca 297  Q
    ||||||||||| |||||||    
T  26804363 ttttaagttaactctcaca 26804345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 152 - 298
Target Start/End: Complemental strand, 25542425 - 25542280
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagcc 250  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| ||  |||||| |||||||| ||||||||||||||||||||     
T  25542425 cagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaatcgtgccacgttgcccagca 25542327  T
Q  251 gtcgtgccacgattctgcagaaacctgattttaagttaattctcacat 298  Q
     |||||||||  | |||||| | | |||||||||||||| ||||||||    
T  25542326 atcgtgccacattcctgcag-atcttgattttaagttaactctcacat 25542280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35643 - 35555
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  35643 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 35555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44578 - 44490
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| ||  ||||||||||    
T  44578 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggtacaaatctgc 44490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1049570 - 1049658
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  1049570 tgtttcagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 1049658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 27306504 - 27306592
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  27306504 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 27306592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 35565 - 35379
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| |  | ||  | | |||||||| |||| ||||||||| |||||||||||||||||||||||||||||| |||     
T  35565 aacaaatctgcacccaaaaatacgtttctgctatttgctgccagcgcacgatcgggccacgatgcgaccccatcgtgccacgatttttccagtgctttg- 35467  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    ||  |||  | |||||||| |||||||||||||||| |||  ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  35466 cctcaaacttgaaacctccaatcgtgccacgttgcctagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 35379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 22392487 - 22392399
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||| ||| || |||||||||||    
T  22392487 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttacaatttggaacaaatctgc 22392399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31156186 - 31156247
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  31156186 tgtttcagccccctctatctcaaagtttgccttgatacaagctctatatttatagtaaaagt 31156247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 152 - 297
Target Start/End: Complemental strand, 44459 - 44314
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagcc 250  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |   |||  | |||||||| |||||||||| ||||||||      
T  44459 cagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttttccagtgctttg-cgtcaaacttgaaacctccaatcgtgccacattgcccagaa 44361  T
Q  251 gtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
     ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  44360 atcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 44314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 25542544 - 25542459
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 87  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || || ||||||    
T  25542544 tgtttcagcccc-tctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatct 25542459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 1606472 - 1606423
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1606472 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 1606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 1049699 - 1049816
Alignment:
Q  183 tcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgatt 280  Q
    ||||||||||||||||||||| ||||||   |||| || ||||||||| |||||||||||||||||||  ||||||||||||| |||||| | | |||||    
T  1049699 tcgtgccacgatttttccagtaccttgcttcaaaa-ctgaaacctccaatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgatt 1049796  T
Q  281 ttaagttaattctcacattt 300  Q
    ||||||||| ||||||||||    
T  1049797 ttaagttaactctcacattt 1049816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 152 - 297
Target Start/End: Complemental strand, 18567508 - 18567363
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagcc 250  Q
    |||||||||||||||||| | || ||||||||||||||||||    ||||||| |||| ||  |||||| |||||||| |||||||||| |||||||||     
T  18567508 cagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttg-cctcaaaactgaaacctccaatcgtgccactttgcccagct 18567410  T
Q  251 gtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
     ||||||||||| ||||| || ||||||||||||||| || |||||||    
T  18567409 atcgtgccacgatttctgtag-aacctgattttaagtcaactctcaca 18567363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 152 - 297
Target Start/End: Original strand, 31435441 - 31435586
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagcc 250  Q
    |||||||||||||||||| | || ||||||||||||||||||    ||||||| |||| ||  |||||| |||||||| |||||||||| |||||||||     
T  31435441 cagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttg-cctcaaaactgaaacctccaatcgtgccactttgcccagct 31435539  T
Q  251 gtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
     ||||||||||| ||||| || ||||||||||||||| || |||||||    
T  31435540 atcgtgccacgatttctgtag-aacctgattttaagtcaactctcaca 31435586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18567627 - 18567545
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaa 83  Q
    |||||||||||| ||||||||||||||| || ||||||||| ||||||||||||||||||||   ||||||||| || |||||    
T  18567627 tgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaa 18567545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31435322 - 31435404
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaa 83  Q
    |||||||||||| ||||||||||||||| || ||||||||| ||||||||||||||||||||   ||||||||| || |||||    
T  31435322 tgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaa 31435404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 40837019 - 40837105
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||    |||||||| || |||||||||||    
T  40837019 tttcagccccctcaatctccaaatttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgc 40837105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7188557 - 7188496
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||    
T  7188557 tgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 7188496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13099751 - 13099812
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  13099751 tgtttcaaccccctctatctcaaggtttactttgattcaaggtctatatttatagtaaaagt 13099812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42331274 - 42331335
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||||    
T  42331274 tgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagt 42331335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26804583 - 26804499
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| ||     ||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  26804583 tgtttcagccccctctatctcaaagtttactc----acaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 26804499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3878591 - 3878497
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctat----atttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||||    |||||||||||||||   ||||||||| || |||||||||||    
T  3878591 tgtttcagccccctctatctctcaaagtttgctctgatacaaggtctatattaatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 3878497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22251817 - 22251878
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||||    
T  22251817 tgtttcagcctcctctatctcaaagtttactctgattcaaggtttatatttatagtaaaagt 22251878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21678080 - 21678020
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| | |||||||||  |||||||||||||||||||    
T  21678080 tgtttcagccccctctatctcaaggtttacattgatacaatatctatatttatagtaaaag 21678020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25276155 - 25276095
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||| ||||||||||||||||||||||||| |||||||| |  |||||||||||||||||    
T  25276155 tgttttagccccctctatctcaaagtttgctctgatacaaagcatatatttatagtaaaag 25276095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 20091818 - 20091877
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| |||| || ||||| || |||||||||||||||||||||    
T  20091818 tttcagccccctctatctcaaggtttactctgataaaaagtctatatttatagtaaaagt 20091877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 1849967 - 1849918
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  1849967 ctctctctcaaagtttgctatgaaacaaggtctatatttatagtaaaagt 1849918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 7092471 - 7092512
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  7092471 tctcaaagtttgctctgatacaaggtctatatttatagtaaa 7092512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7094697 - 7094759
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||    |||||||||| |||||||||||||||||||||| ||||    
T  7094697 tgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttataataaa 7094759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22828908 - 22828969
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| ||  ||||||| | |||||||||||||||||||    
T  22828908 tgtttcagccccctctatctcaaggtttactcggatacaaagcctatatttatagtaaaagt 22828969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11355272 - 11355212
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| | ||||||||||||||||||    
T  11355272 tgtttcagccccctctatctcaaggtttacactgatacaaagcctatatttatagtaaaag 11355212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20137384 - 20137444
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| | | ||||||||||||||||    
T  20137384 tgtttcagccccctctatctcaaggtttactctgatacaaagccaatatttatagtaaaag 20137444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21680041 - 21679981
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  21680041 tgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 21679981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 30906327 - 30906386
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||  ||| || | ||||||||||||||||||||| ||||||    
T  30906327 tttcagccccctctatctcaagatttactcttatacaaggtctatatttatagcaaaagt 30906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37412403 - 37412462
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||||| |||||| | |||| || |||| |||||||||||||||||||||||    
T  37412403 tgtttcagccccctatatctccaggtttactctgattcaaggtctatatttatagtaaaa 37412462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 443609 - 443548
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| ||| ||||||||||||| |||| || |||| ||| |||||||||||||||||||||    
T  443609 tgttttagctccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaagt 443548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4296210 - 4296271
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatac-aaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||| || ||||||||||||||||||||    
T  4296210 tgtttcagccccctctatctcaaggtttacactgatacaaatgtctatatttatagtaaaag 4296271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7470297 - 7470359
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||    |||||||  | |||||||||||||||||||||||||||    
T  7470297 tgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7470359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7472255 - 7472317
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||    |||||||  | |||||||||||||||||||||||||||    
T  7472255 tgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3035735 - 3035670
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  3035735 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 3035670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11757242 - 11757177
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  11757242 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 11757177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20299472 - 20299407
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  20299472 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 20299407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24465563 - 24465503
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgc-tttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| | | |||||||| |||||||| ||||||||||    
T  24465563 tgtttcagccccctctatctcaaggtttacatctgatacaaagtctatatctatagtaaaa 24465503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24748608 - 24748548
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||  ||||||||| |  |||||||| ||||||||||||| ||||||    
T  24748608 tgtttcagccccctctaagtcaaagtttacactgatacaatgtctatatttataataaaag 24748548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38394000 - 38393935
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  38394000 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 38393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39146262 - 39146322
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||| ||||||| |||| |  |||||||  ||||||||||||||||||||    
T  39146262 tgtttcagccccctccatctcaaggtttacactgatacagtgtctatatttatagtaaaag 39146322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44724593 - 44724533
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||| |||||| | |||| |  |||||||| ||||||||||||||||||||    
T  44724593 tgtttcagccccctatatctccaggtttacactgatacaatgtctatatttatagtaaaag 44724533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3677293 - 3677235
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||| |||||||| |||||| || |||| |||| ||||||||||||||||||    
T  3677293 tgtttcagcccc-tctatctccaagtttactctgattcaagatctatatttatagtaaaa 3677235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21990164 - 21990106
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||| |||||||| | |||| || |||| |||||||||||||||||||||||    
T  21990164 tgtttcagcccc-tctatctccaggtttactctgattcaaggtctatatttatagtaaaa 21990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24258477 - 24258423
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    ||||||||||||||||||||||| |||| || ||||||||   ||||||||||||    
T  24258477 tgtttcagccccctctatctcaatgtttactctgatacaaaacctatatttatag 24258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 7349586 - 7349615
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  7349586 tgatacaaggtctatatttatagtaaaagt 7349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 18345519 - 18345490
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  18345519 tgatacaaggtctatatttatagtaaaagt 18345490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 28485544 - 28485515
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  28485544 tgatacaaggtctatatttatagtaaaagt 28485515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 38396268 - 38396239
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  38396268 tgatacaaggtctatatttatagtaaaagt 38396239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 40946244 - 40946167
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||| ||||||||||||||    | |||||||||||| ||||||  || || |||||| ||||||||||||||||    
T  40946244 aaaaatatgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtgacacgatttttccagtg 40946167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 43253831 - 43253860
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  43253831 tgatacaaggtctatatttatagtaaaagt 43253860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 9680796 - 9680768
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  9680796 tgatacaaggtctatatttatagtaaaag 9680768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 40946321 - 40946277
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| ||| ||||||| |||||||||||| |||||    
T  40946321 tctcaaagtttgctatgaaacaaggtttatatttatagtgaaagt 40946277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48457667 - 48457602
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    |||||||||||||||||||||||| |||||    
T  48457667 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtgaaagt 48457602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 120)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 50493983 - 50493675
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50493983 tgtttcagccccctctatctctcagtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 50493884  T
Q  101 aacaaa-----------actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgcc 189  Q
    ||||||           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  50493883 aacaaatttgtaacaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgagactccatcgtgcc 50493784  T
Q  190 acgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  50493783 acgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtgccacgattctgcagaaacctgattttaagttaa 50493684  T
Q  290 ttctcacat 298  Q
     ||||||||    
T  50493683 ctctcacat 50493675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 7 - 297
Target Start/End: Original strand, 53896475 - 53896754
Alignment:
Q  7 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||          
T  53896475 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt------ 53896568  T
Q  107 actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 206  Q
         |||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  53896569 -----aacaaatctgctcccaaaaatacgttttatttttatccgcaagagcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtacc 53896663  T
Q  207 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  53896664 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagcaatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 53896754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 33 - 297
Target Start/End: Complemental strand, 38210320 - 38210067
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaat 132  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  38210320 tgatacaaggcctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctg-----------taacaaaactgtaacaaatctgctcccaaaaat 38210232  T
Q  133 acgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatc 232  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38210231 acgttttatttttatccgccagcgcactatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatc 38210132  T
Q  233 gtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38210131 gtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 38210067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 6063719 - 6064006
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatct 98  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6063719 tgtttcagccccctctatctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatct 6063818  T
Q  99 gtaacaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgattttt 198  Q
    ||           ||||||||||| |||||||||| |||||||||||||||| |||  |||||||||||||||||| |||||||||||||||||||||||    
T  6063819 gt-----------aacaaatctgcacccaaaaatatgttttatttttatccgccagtccaccatcgtgccacgatgcgaccccatcgtgccacgattttt 6063907  T
Q  199 ccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
     |||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  6063908 tcagtgccttgcccaaaaaactaaaacctccattgtgccacgttgccttgccatcgtgccacgattctgcataaacctgattttaagttaattctcaca 6064006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 33 - 240
Target Start/End: Complemental strand, 25388850 - 25388654
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaat 132  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||    
T  25388850 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa-----------tctgctcccaaaaat 25388762  T
Q  133 acgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatc 232  Q
    | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25388761 atgttttatttttatctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatc 25388662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 28 - 285
Target Start/End: Complemental strand, 5899717 - 5899471
Alignment:
Q  28 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctccca 127  Q
    |||| ||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||           ||||    
T  5899717 tgctctgataaaaggtctatatttatagtaaaagtctcgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaatctgta-----------ccca 5899629  T
Q  128 aaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacct 227  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||| |    
T  5899628 aaaatacgttttatttttatctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttttccagtgccttgcctaaaaaactaaaacat 5899529  T
Q  228 ccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaag 285  Q
    |||||||||||||||||||  |  |||||||| |||| ||||||||||||||| ||||    
T  5899528 ccatcgtgccacgttgcccttcaatcgtgccatgattatgcagaaacctgattataag 5899471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 5886242 - 5885983
Alignment:
Q  28 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctccca 127  Q
    |||| ||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||           | ||| ||||    
T  5886242 tgctctgataaaaggtctatatttatagtaaaagtttcgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa-----------tttgcaccca 5886154  T
Q  128 aaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacct 227  Q
    ||||||||||||||||||||| | |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||| |    
T  5886153 aaaatacgttttatttttatctgccagcgcaccatcgtaccacgatgcgaccccatcgtgccacgatttttccagtaccttgcctaaaaaactaaaacat 5886054  T
Q  228 ccatcgtgccacg-ttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||| |||| |  |  |||||||||||||||| | |||||| |||||||||||| |||||||    
T  5886053 ccatcgtgccacgtttgcgcttcaatcgtgccacgattctgtaaaaacctaattttaagttaactctcaca 5885983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 22114656 - 22114842
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  ||| || |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  22114656 aacaaatctgcacccaaaaatacgtttctgttattcgccgccatcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgc 22114755  T
Q  211 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |  ||||||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| |||||||    
T  22114756 ctcaaaaactgaaacctccatcgtgccacgttgcccaaccatcgtgccacgattctacagaaacctgattttaagttaactctcaca 22114842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 18099521 - 18099707
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| |||| ||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  18099521 aacaaatctgcacccaaaaatacgtttctattgttcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgtcttgc 18099620  T
Q  211 ccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |  |||| || ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  18099621 ctcaaaa-ctgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 18099707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 35777280 - 35777163
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgat 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  35777280 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctgtcgtgccacgattctgcagaaatctaat 35777181  T
Q  280 tttaagttaattctcaca 297  Q
    |||||||||| |||||||    
T  35777180 tttaagttaactctcaca 35777163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 112 - 296
Target Start/End: Complemental strand, 5191559 - 5191374
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||| | |||||  | | |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||     
T  5191559 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgagatcccatcgtgccacgatttttccagtaccttg- 5191461  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcac 296  Q
    ||  |||||| |||||||| ||||||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||| ||||||    
T  5191460 cctcaaaactgaaacctccaatcgtgccacgatgcccagcaatcgtgccacgattctgcagaaatctgattttaagttaactctcac 5191374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35777405 - 35777317
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  35777405 tgtttcagccccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 35777317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 6066069 - 6066159
Alignment:
Q  1 tgtttcagcccc-ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgct 90  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6066069 tgtttcagcccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaatctgtaacaaatctgct 6066159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 6719396 - 6719489
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa 106  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  6719396 ctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtatcaaa 6719489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 166 - 297
Target Start/End: Original strand, 18097291 - 18097422
Alignment:
Q  166 gccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgatt 264  Q
    ||||| ||| |||||||||||||||||||||||||  |||||||||  |||| || ||||||||| |||||||||||||||||||| |||||||||||||    
T  18097291 gccactatgcgaccccatcgtgccacgatttttcctatgccttgcctcaaaa-ctgaaacctccaatcgtgccacgttgcccagccatcgtgccacgatt 18097389  T
Q  265 ctgcagaaacctgattttaagttaattctcaca 297  Q
     |||||||||||||||||||||||| |||||||    
T  18097390 ttgcagaaacctgattttaagttaactctcaca 18097422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 38889875 - 38889756
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcag-aaacctga 278  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||  ||| |||| |||||||||||||| |||||| |    
T  38889875 ccatcgtgccacgatttttccaatgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgccatcgtaccacgattctgcagaaaacctaa 38889776  T
Q  279 ttttaagttaattctcacat 298  Q
    ||||||||||| ||||||||    
T  38889775 ttttaagttaactctcacat 38889756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 112 - 302
Target Start/End: Original strand, 10956378 - 10956568
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| || |||||||||||| | || ||  | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10956378 aacaaatctgcacctaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 10956477  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacatttat 302  Q
    ||  |||||| |||||||| ||||||||| | || |||||| | ||||||||||| |||||| | |||||||||||||||| ||||||| ||||    
T  10956478 cc-caaaactgaaacctccaatcgtgccatgatgtccagccat-gtgccacgattcctgcag-atcctgattttaagttaactctcacaattat 10956568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 212 - 297
Target Start/End: Original strand, 7606878 - 7606963
Alignment:
Q  212 caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||    
T  7606878 caaaaaactgaaacctccatcgtgccacgttgcccagccatcgtgtcacgattctgcagaaacctgattttaagttaactctcaca 7606963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 11163008 - 11162891
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctga 278  Q
    |||||||||||| |||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||  ||||||||||||| |||||| | | |||    
T  11163008 ccatcgtgccacaatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttga 11162910  T
Q  279 ttttaagttaattctcaca 297  Q
    ||||||||||| |||||||    
T  11162909 ttttaagttaactctcaca 11162891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11170388 - 11170300
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  11170388 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 11170300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 26720530 - 26720444
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  26720530 tttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgc 26720444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 10192401 - 10192521
Alignment:
Q  168 cacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctg 267  Q
    ||||||| || |||||||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||||||  ||  |||||||||||||| |    
T  10192401 cacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaa-ctgaaacctccatcgtgccacgttgccttgcgatcgtgccacgattccg 10192499  T
Q  268 cagaaacctgattttaagttaa 289  Q
    || ||| |||||||| ||||||    
T  10192500 cataaatctgattttcagttaa 10192521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 112 - 298
Target Start/End: Original strand, 32264394 - 32264581
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| |||||||||| |||| | || ||  | | |||||||||||||||||||| ||  | |||||||||||||||    ||||||| |||||    
T  32264394 aacaaatctgcacccaaaaatatgtttctgttattcgctgccagcgcaccatcgtgccacgttgcaagcccatcgtgccacgaaaaatccagtgacttgc 32264493  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcacat 298  Q
    |  ||||||| |||||||| ||||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  32264494 ctcaaaaactgaaacctccaatcgtgccacgtt-cccagccatcgtgccacgatttctgca-aaacctgattttaagttaactctcacat 32264581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1321425 - 1321337
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||   ||||||||| || |||||||||||    
T  1321425 tgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 1321337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3859512 - 3859424
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  3859512 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgc 3859424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5522888 - 5522976
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  5522888 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgc 5522976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11163134 - 11163046
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||   ||||||||| || |||||||||||    
T  11163134 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatcgtaaaagtttcgcttaaaatttggaacaaatctgc 11163046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 152 - 297
Target Start/End: Complemental strand, 26720413 - 26720268
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagcc 250  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||  |||  | |||||||| ||| ||||||||||| |||||    
T  26720413 cagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcctgccacgttgctcagcc 26720315  T
Q  251 gtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
     ||||||||||||| |||||| | |||||||||||||||| |||||||    
T  26720314 atcgtgccacgattcctgcag-atcctgattttaagttaactctcaca 26720268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 6066144 - 6066210
Alignment:
Q  108 ctgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatg 174  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  6066144 ctgtaacaaatctgctcccaaaaatacattttatttttatccgccagcgcaccatcgtgccacgatg 6066210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 38890024 - 38889918
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaat 96  Q
    |||||||||||||||||||||    ||||||||||   ||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||||||    
T  38890024 tgtttcagccccctctatctctctcaaagtttgct---atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcttaaaat 38889928  T
Q  97 ctgtaacaaa 106  Q
    ||||||||||    
T  38889927 ctgtaacaaa 38889918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 10085481 - 10085601
Alignment:
Q  168 cacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctg 267  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||  ||  || ||||||||||| |    
T  10085481 cacgatgtgatcccatcgtgccacgatttttccagtgccttg-cctcaaaactgaaacctccatcgtgccacgttgccttgcgatcatgccacgattccg 10085579  T
Q  268 cagaaacctgattttaagttaa 289  Q
    || ||| |||||||| ||||||    
T  10085580 cataaatctgattttcagttaa 10085601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 1321347 - 1321161
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||| | |||||  | | |||| |||||||||||||||||| ||||||||||||||||||||||| |||||| |||     
T  1321347 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttg- 1321249  T
Q  211 ccaaaaaactaaaacctc-catcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    ||  |||  | |||||||  ||||||||||||||||||||  ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  1321248 cctcaaacttgaaacctctaatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 1321161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5191637 - 5191549
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    |||||||| || |||||||||||    
T  5191637 tgtttcagccccctctatctccaagtttgcttagatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgc 5191549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 11170260 - 11170145
Alignment:
Q  182 atcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgatt 280  Q
    |||| |||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||   |||||||||||| |||||| | | |||||    
T  11170260 atcgagccacgatttttccagtgccttgcctcaaaaaccgaaacctccatcgtgccacgttgcccagcaaccgtgccacgattcctgcag-atcttgatt 11170162  T
Q  281 ttaagttaattctcaca 297  Q
    ||||||||| |||||||    
T  11170161 ttaagttaactctcaca 11170145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15780844 - 15780756
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  15780844 tgtttcagccccctctatctccaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 15780756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22114578 - 22114666
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  22114578 tgtttcagccccttctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 22114666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48361943 - 48362031
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  48361943 tgtttcagccccctgtatctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 48362031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 6066195 - 6066254
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccac 239  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6066195 ccatcgtgccacgatgtttccagtgccttgcccaaaaaactaaaacctccatcgtgccac 6066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 180 - 297
Target Start/End: Original strand, 6719532 - 6719651
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc---atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacct 276  Q
    |||||||||||||||||||||||||| ||||| ||||| || |||||||    ||||||||||| |||||  |  |||||||||||||  ||||||||||    
T  6719532 ccatcgtgccacgatttttccagtgcattgcctaaaaa-ctgaaacctctccaatcgtgccacgatgcccttcaatcgtgccacgattaagcagaaacct 6719630  T
Q  277 gattttaagttaattctcaca 297  Q
    |||||||||||||||||||||    
T  6719631 gattttaagttaattctcaca 6719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4308554 - 4308615
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  4308554 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 4308615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 195
Target Start/End: Complemental strand, 3859434 - 3859350
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatt 195  Q
    ||||||||||| ||||||||||||||| |||| ||  ||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  3859434 aacaaatctgcacccaaaaatacgtttatattattcgccgccagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatt 3859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 5522966 - 5523152
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||| | |||||  | | ||||||||||||||||||||||| || ||||| ||||||||||||||||||| |||||     
T  5522966 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtaccttg- 5523064  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    ||  |||||| ||||| || ||||||||| ||||||||||  || |||||||||| || ||| | | |||||||||||||| |||||||    
T  5523065 cctcaaaactgaaaccaccaatcgtgccatgttgcccagcaatcttgccacgattcctccag-atcttgattttaagttaactctcaca 5523152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24979691 - 24979603
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| || ||||||||||| |||||||||||| |||||  | |||||||| || |||||||||||    
T  24979691 tgtttcagccccctctatctcaaagtttactctgatacaaggtatatatttatagtgaaagtattacttaaaatttggaacaaatctgc 24979603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 45882923 - 45882835
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  45882923 tgtttcagccccctctatctcatagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaattttcaacaaatctgc 45882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 10958674 - 10958767
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||| || |||||||||||| | || ||  | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10958674 aacaaatctgcacctaaaaatacgtttctgttattggctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 10958767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18097173 - 18097262
Alignment:
Q  1 tgtttcagccccctctatctca-aagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||| |||||||||||||||  |||||| || |||||||||||||||||||||||||||||||  ||||||||| || |||||||||||    
T  18097173 tgtttgagccccctctatctctcaagtttactatgatacaaggtctatatttatagtaaaagtctcgcttaaaatttgaaacaaatctgc 18097262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35918222 - 35918283
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  35918222 tgtttcagccccctctatctcaaaatttgctatgatacaaggtctatatttatagtgaaagt 35918283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 51727279 - 51727340
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  51727279 tgtttcagccccctttatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 51727340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12268239 - 12268323
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 85  Q
    ||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||||   ||||||||| || |||||||    
T  12268239 tgtttcagctccctctatctcaaagtttactctgatacaagttctatatttatagtaaaagtatcgcttaaaatttggaacaaat 12268323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1313394 - 1313333
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||    
T  1313394 tgtttcagccccctctatctcaaggtttactctgattcaaggtctatatttatagtaaaagt 1313333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18099443 - 18099531
Alignment:
Q  1 tgtttcagccccctctatctca-aagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||  |||||| || |||||||||||||||||| ||||||||||||  ||||||||| || |||||||||||    
T  18099443 tgtttcagccccctctatctctcaagtttactctgatacaaggtctatatt-atagtaaaagtctcgcttaaaatttggaacaaatctgc 18099531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43226070 - 43226009
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||||    
T  43226070 tgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaagt 43226009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43228275 - 43228214
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||||    
T  43228275 tgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaagt 43228214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10956300 - 10956388
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||  | |||| || ||||||||||||||||||||||||||||    |||||||||| || |||||||||||    
T  10956300 tgtttcagccccctctatcttcatgtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgc 10956388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10958596 - 10958684
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||  | |||| || ||||||||||||||||||||||||||||    |||||||||| || |||||||||||    
T  10958596 tgtttcagccccctctatctttatgtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgc 10958684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32219079 - 32218991
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||  |  ||||||||||||||||||||| | |||||  | |||||||| || |||||||||||    
T  32219079 tgtttcagccccctctatctcaaagtttagtcagatacaaggtctatatttatactgaaagtattacttaaaatttggaacaaatctgc 32218991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32264312 - 32264404
Alignment:
Q  1 tgtttcagccccctctatctcaaagtt----tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||| |||||||||||||||||||||    | || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  32264312 tgtttgagccccctctatctcaaagttaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgc 32264404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 51675028 - 51675087
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||||||    
T  51675028 tgtttcagccccctctatctcaacgtttacattgatacaacgtctatatttatagtaaaa 51675087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6561794 - 6561740
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    ||||||||||||||||||||||| |||| || |||||||||||||||||||||||    
T  6561794 tgtttcagccccctctatctcaaggtttactctgatacaaggtctatatttatag 6561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 24177261 - 24177175
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||| ||||| |||| || |||||||||||||||||||||| |||||||    |||||||| || |||||||||||    
T  24177261 tttcagccccctctagctcaatgtttactatgatacaaggtctatatttataataaaagtatcccttaaaatttggaacaaatctgc 24177175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 25388663 - 25388618
Alignment:
Q  252 tcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  25388663 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 25388618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53915769 - 53915830
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||| || |||| || |||| |||||||||||||||||||||||||    
T  53915769 tgtttcagccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagt 53915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1626956 - 1627016
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  1626956 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 1627016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 3859362 - 3859314
Alignment:
Q  252 tcgtgccacgattctgcagaaacctgattttaagttaattctcacattt 300  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  3859362 tcgtgccacgattatgcagaaacctgattttaagttaactctcacattt 3859314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 53597216 - 53597164
Alignment:
Q  10 cccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  53597216 cccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagt 53597164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 10084683 - 10084754
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    ||||||||| || |||||||||||    
T  10084683 tctcaaagtttgctccgatacaaggtctatatttatagtaaaagcatcgcttaaaatttggaacaaatctgc 10084754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 10191603 - 10191670
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 85  Q
    ||||||||||||||  |||||||||||||||||||||||||||||   ||||||||| || |||||||    
T  10191603 tctcaaagtttgctccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaat 10191670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 18162639 - 18162560
Alignment:
Q  11 ccctctatctcaaagtttgctt-tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||| |||||| ||  ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  18162639 ccctctatctccaagtttactcatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 18162560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 28181006 - 28180948
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  28181006 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 28180948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 6066246 - 6066291
Alignment:
Q  252 tcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||    
T  6066246 tcgtgccacaattctgcagaaacctgattttaagttaactctcaca 6066291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13420445 - 13420506
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| ||| |||||||| ||||||||||||||||   |||||||||||||||||||    
T  13420445 tgtttcagcctcctatatctcaaggtttgctttgatacaaaacctatatttatagtaaaagt 13420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23633444 - 23633383
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| ||||| ||||||||||| |||| || |||||||| |||||||||||||||||||||    
T  23633444 tgttttagccctctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 23633383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28761701 - 28761762
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||||||||||||||| |||| || |||| ||| |||||||||||||||||||||    
T  28761701 tgtttcaaccccctctatctcaaggtttactctgatgcaaagtctatatttatagtaaaagt 28761762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 32218912 - 32218836
Alignment:
Q  222 aaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||| |||||||||||||||||  | ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  32218912 aaacctccaatcgtgccacgttgcccaatcatcgtgccacgatttctgcag-aacctgattttaagttaactctcaca 32218836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51943355 - 51943294
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||| ||||||||||| | |||| || |||| |||||||||||||||||||||||||    
T  51943355 tgtttcagcaccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagt 51943294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53917937 - 53917998
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||| ||||||| ||||  | |||| |||||||||||||||||||||||||    
T  53917937 tgtttcagccccctccatctcaaggtttaatctgattcaaggtctatatttatagtaaaagt 53917998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 880725 - 880785
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||| |||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  880725 tgtttcagacccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 880785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28137568 - 28137628
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| |  |||||||||||||||||    
T  28137568 tgtttcagccccctctatctcaaggtttactctgatacaacgcatatatttatagtaaaag 28137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43423736 - 43423796
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||| |||||| |||| |  |||||||| ||||||||||||||||||||    
T  43423736 tgtttcagccccctctttctcaaggtttacagtgatacaatgtctatatttatagtaaaag 43423796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47701868 - 47701928
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||| |||||||| |||| |  |||||||| ||||||||||||||||||||    
T  47701868 tgtttcagccccctttatctcaaggtttacactgatacaatgtctatatttatagtaaaag 47701928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 48362119 - 48362186
Alignment:
Q  230 atcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||| || ||||||||||| |||| ||| |||||||||||||||||| |||||||    
T  48362119 atcgtgccacgttgcccaaccatcgtgccacgatttctacag-aacctgattttaagttaactctcaca 48362186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27635900 - 27635959
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| || | || |||||||||||||| ||||||||    
T  27635900 tgtttcagccccctctatctcaaggtttactctaattcaaggtctatatttgtagtaaaa 27635959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 3314666 - 3314608
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| |||| |  ||||||||  |||||||||||||||||||    
T  3314666 tttcagccccctctatctcaaggtttacactgatacaatatctatatttatagtaaaag 3314608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 45882806 - 45882752
Alignment:
Q  150 gtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    |||||||||||||||||||||| ||  | ||||||||| ||||||||||||||||    
T  45882806 gtcagcgcaccatcgtgccacgttgcaatcccatcgtggcacgatttttccagtg 45882752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 4308648 - 4308725
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||||||||||||||    | |||||||||||| ||||||  || || |||||| ||||||||||||||||    
T  4308648 aaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtg 4308725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4560538 - 4560599
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||||||  ||||||| ||||||| |||||    
T  4560538 tgtttcagccccctctatctcaatgtttactatgatacatagtctatacttatagtgaaagt 4560599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6484369 - 6484308
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| |  |||||||| | |||||||||||| ||||||    
T  6484369 tgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagcaaaagt 6484308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4104168 - 4104233
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  4104168 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 4104233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5927037 - 5927097
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||| ||||||||||| |||| |   ||||||| ||||||||||||||||||||    
T  5927037 tgtttcagccctctctatctcaaggtttacaccgatacaatgtctatatttatagtaaaag 5927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28100314 - 28100374
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| | || || |||||||| |  |||||||||||||||||    
T  28100314 tgtttcagccccctctatctcaagggttactctgatacaacgcttatatttatagtaaaag 28100374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36011811 - 36011751
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||| |||||||| |||| |  | |||||| ||||||||||||||||||||    
T  36011811 tgtttcagccccctttatctcaaggtttacactaatacaatgtctatatttatagtaaaag 36011751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53468728 - 53468788
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||| ||||| || |||| |  |||||||| ||||||||||||||||||||    
T  53468728 tgtttcagccccctttatctaaaggtttacactgatacaatgtctatatttatagtaaaag 53468788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 53591179 - 53591119
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| |||||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  53591179 tgtttcagcctcctctatctcaaggtttacacttatacaatgtctatatttatagtaaaag 53591119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3306783 - 3306724
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||||| |||||| | |||| |  |||||||| |||||||||||||||||||    
T  3306783 tgtttcagccccctatatctctaggtttacactgatacaatgtctatatttatagtaaaa 3306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6231433 - 6231374
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||| |||||||||||  ||| |  |||||||| |||||||||||||||||||    
T  6231433 tgtttcagcccgctctatctcaagatttacactgatacaatgtctatatttatagtaaaa 6231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 25690651 - 25690690
Alignment:
Q  23 aagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  25690651 aagtttgctctgatacaaggtctatatttatagtgaaagt 25690690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 31151330 - 31151271
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctt-tgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||| | |||| | | |||||||| ||||||||||||||||||||    
T  31151330 tttcagccccctctatctcgaggtttacatctgatacaaagtctatatttatagtaaaag 31151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43421688 - 43421747
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||| |||| |||||||||| |||| |  |||||||| |||||||||||||||||||    
T  43421688 tgtttcaaccccttctatctcaaggtttacactgatacaatgtctatatttatagtaaaa 43421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 533 - 575
Target Start/End: Original strand, 1076815 - 1076857
Alignment:
Q  533 aataaacttggggaaggtggatttggaccagtgtataaggtaa 575  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||    
T  1076815 aataaacttggagaaggtggctttggaccagtatataaggtaa 1076857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 533 - 575
Target Start/End: Complemental strand, 1300205 - 1300163
Alignment:
Q  533 aataaacttggggaaggtggatttggaccagtgtataaggtaa 575  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||    
T  1300205 aataaacttggagaaggtggctttggaccagtatataaggtaa 1300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 13893347 - 13893289
Alignment:
Q  31 tttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||| |||||||||||||||||||||    |||||||| || |||||||||||    
T  13893347 tttgatacaatgtctatatttatagtaaaagtaacccttaaaatttggaacaaatctgc 13893289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 27101472 - 27101519
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||  |||||| |||||||||||||||||||||||| |||||    
T  27101472 ctctatctcaa--tttgctctgatacaaggtctatatttatagtgaaagt 27101519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 455855 - 455826
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  455855 tgatacaaggtctatatttatagtaaaagt 455826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 458232 - 458203
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  458232 tgatacaaggtctatatttatagtaaaagt 458203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 746703 - 746674
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  746703 tgatacaaggtctatatttatagtaaaagt 746674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 10621847 - 10621876
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  10621847 tgatacaaggtctatatttatagtaaaagt 10621876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 25533386 - 25533357
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  25533386 tgatacaaggtctatatttatagtaaaagt 25533357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 27101627 - 27101704
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||||||||||||||    | ||||||||| || ||||||  || || |||||| ||||||||||||||||    
T  27101627 aaaaatacgttttatttttatcttcaatcgcaccatcttggcacgattcgatccaatcgtggcacgatttttccagtg 27101704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 29956636 - 29956587
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| | |||||| ||||||||||||||| |||||    
T  29956636 ctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaagt 29956587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 30005791 - 30005742
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| | |||||| ||||||||||||||| |||||    
T  30005791 ctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaagt 30005742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 31021450 - 31021479
Alignment:
Q  31 tttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||||||||||    
T  31021450 tttgatacaaggtctatatttatagtaaaa 31021479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 35918316 - 35918393
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||||||||||||||    | |||||||||||| ||| ||  || || ||||||| |||||||||||||||    
T  35918316 aaaaatacgttttatttttatcttcaatcgcaccatcgtggcactattcgatccaatcgtgctacgatttttccagtg 35918393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 42990234 - 42990205
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  42990234 tgatacaaggtctatatttatagtaaaagt 42990205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 43228181 - 43228108
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 200  Q
    ||||||||||||||||||||||    | |||||||||||| ||||||  || || |||||| ||||||||||||    
T  43228181 aaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttcc 43228108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 890044 - 890104
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||  |||||||||||| |||| |  ||||||||  |||||||||||||||||||    
T  890044 tgtttcagcttcctctatctcaaggtttacactgatacaatatctatatttatagtaaaag 890104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 27101558 - 27101594
Alignment:
Q  26 tttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||| |||||||||||||||||||||||| |||||    
T  27101558 tttgctctgatacaaggtctatatttatagtgaaagt 27101594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28102275 - 28102335
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| | || || | |||||| |  |||||||||||||||||    
T  28102275 tgtttcagccccctctatctcaagggttactctaatacaacgcttatatttatagtaaaag 28102335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 39715445 - 39715393
Alignment:
Q  10 cccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| |||| |  |||||||| |||||||||||||| ||||||    
T  39715445 cccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaagt 39715393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 47149205 - 47149233
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  47149205 tgatacaaggtctatatttatagtaaaag 47149233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 54691854 - 54691906
Alignment:
Q  9 ccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||| || |||| || |||||||| | ||||||||||||||||||    
T  54691854 ccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaag 54691906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 238; Significance: 1e-131; HSPs: 87)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 31542739 - 31542442
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31542739 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgt 31542640  T
Q  101 aacaaaactgtaacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttc 199  Q
    |||||| ||||||||||||||| |||||||||| |||| | |||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  31542639 aacaaatctgtaacaaatctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttc 31542540  T
Q  200 cagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||| |||||||||||||||||||||||| |||||||    
T  31542539 cagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtgtcacgattttgcagaaacctgattttaagttaactctcaca 31542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 21 - 297
Target Start/End: Original strand, 15354777 - 15355065
Alignment:
Q  21 caaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa------------ac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||            ||    
T  15354777 caaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaac 15354876  T
Q  109 tgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcctt 208  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15354877 tgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcctt 15354976  T
Q  209 gcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  15354977 gcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 15355065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 21 - 297
Target Start/End: Original strand, 15357053 - 15357341
Alignment:
Q  21 caaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa------------ac 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||            ||    
T  15357053 caaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaac 15357152  T
Q  109 tgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcctt 208  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15357153 tgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcctt 15357252  T
Q  209 gcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  15357253 gcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 15357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 31545084 - 31544798
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31545084 tgtttcagccccctttatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgt 31544985  T
Q  101 aacaaaactgtaacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttc 199  Q
    || |||           ||||| |||||||||| |||| | |||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  31544984 aataaa-----------tctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttc 31544896  T
Q  200 cagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||||    
T  31544895 cagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 31544798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 24 - 297
Target Start/End: Complemental strand, 10757245 - 10756960
Alignment:
Q  24 agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa------------actgt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||            |||||    
T  10757245 agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatttgtaacaaaaactgt 10757146  T
Q  112 aacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc 211  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10757145 aacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc 10757046  T
Q  212 caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  10757045 caaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgctacgattgtgcagaaacctgattttaagttaactctcaca 10756960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 25 - 297
Target Start/End: Complemental strand, 10749767 - 10749505
Alignment:
Q  25 gtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctc 124  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||| |        |||||||||||||||||||||    
T  10749767 gtttgctttgatacaaggtctatatttatactaaaagtcctgcttaaaatctataacaaatctg--taaca--------aaaactgtaacaaatctgctc 10749678  T
Q  125 ccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaa 224  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10749677 ccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaa 10749578  T
Q  225 cctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  10749577 cctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 10749505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 18 - 298
Target Start/End: Complemental strand, 23665125 - 23664833
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  23665125 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 23665026  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  23665025 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgc 23664926  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacat 298  Q
    ||| ||||||||| ||||| |||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  23664925 ctttcccaaaaaaataaaaactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacat 23664833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 18 - 298
Target Start/End: Original strand, 23793462 - 23793754
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  23793462 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 23793561  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  23793562 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgc 23793661  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacat 298  Q
    ||| ||||||||| ||||| |||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  23793662 ctttcccaaaaaaataaaaactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacat 23793754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 23667400 - 23667109
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||| |||||| |||||||||               
T  23667400 tctcaaagtttgctttgatacaaggtctatatttatagttaaagtcatgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 23667301  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  23667300 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgc 23667201  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||| ||||||||| ||||| |||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  23667200 ctttcccaaaaaaataaaaactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23667109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 31179646 - 31179897
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||    
T  31179646 tgtttcagctccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgctttaaatttgt 31179745  T
Q  101 aacaaa------------actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgc 188  Q
    ||||||            |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  31179746 aacaaatctgtaacaaaaactgtaacaaatctgctcccaaaaatacgttttatttttacccgccagcgcaccatcgtgccacgatgagaccccatcgtgc 31179845  T
Q  189 cacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacg 240  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31179846 cacgatttttccagtgtcttgcccaaaaaactaaaacctccatcgtgccacg 31179897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 33 - 297
Target Start/End: Original strand, 34477379 - 34477632
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaat 132  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| |||||||||           ||||||||||| |||||||||    
T  34477379 tgatacaaggtctatttttatagtaaaagtctcgcttaaaatctgtaacaaatctgctcaaaatctgt-----------aacaaatctgcacccaaaaat 34477467  T
Q  133 acgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatc 232  Q
    | |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34477468 atgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctccatc 34477567  T
Q  233 gtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||    
T  34477568 gtgccacgttgcccagccatcgtgccacgattctgcagaaacttgattttaagttaactctcaca 34477632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 38960334 - 38960604
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  38960334 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 38960433  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| || |||||||                     |||||||||||||||||||||||    
T  38960434 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccaacgcacca---------------------tcgtgccacgatttttccagtgc 38960512  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||| |   |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  38960513 cttgcccaaaaaactaaaacctccatcgtgccgcaaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 38960604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 33 - 297
Target Start/End: Original strand, 34479740 - 34479972
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaat 132  Q
    ||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||| |||||||||||||||           ||||| |||||||||    
T  34479740 tgatacaaggtctatttttatagtaaaggtctcgcttaaaatctgtaacaaatctgctcaaaatctgtaacaaa-----------tctgcacccaaaaat 34479828  T
Q  133 acgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatc 232  Q
    | |||||||||||||||| ||||||||||                     ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34479829 atgttttatttttatccgccagcgcacca---------------------tcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctccatc 34479907  T
Q  233 gtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  34479908 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 34479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 38882031 - 38881845
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38882031 aacaaatctgcacccaaaaatacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 38881932  T
Q  211 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    |  ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  38881931 ctcaaaaactaaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 38881845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 2174797 - 2174680
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgat 279  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  2174797 ccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgat 2174698  T
Q  280 tttaagttaattctcaca 297  Q
    |||||||||| |||||||    
T  2174697 tttaagttaactctcaca 2174680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 25921874 - 25922002
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 278  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  25921874 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctccatcgtgccacgttgtccaaccatcgtgccacgattctgcagaaacctga 25921973  T
Q  279 ttttaagttaattctcacatttatgttgg 307  Q
    ||||||||||| |||||||| | ||||||    
T  25921974 ttttaagttaactctcacatatttgttgg 25922002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 152 - 289
Target Start/End: Complemental strand, 4236515 - 4236378
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagcc 250  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||  |||| || ||||||||| ||||||||||||||||||||    
T  4236515 cagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtgccttgccttaaaa-ctgaaacctccaatcgtgccacgttgcccagcc 4236417  T
Q  251 gtcgtgccacgattctgcagaaacctgattttaagttaa 289  Q
     ||||||||| |||||||||||| |||||||||||||||    
T  4236416 atcgtgccacaattctgcagaaatctgattttaagttaa 4236378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 180 - 305
Target Start/End: Complemental strand, 39797966 - 39797841
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgat 279  Q
    ||||||||||| ||||||||| ||||||||||  ||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  39797966 ccatcgtgccatgatttttccggtgccttgcctcaaaaactgaaacctccatcatgccacgttgcccagccatcgtgccacgattatgcagaaacctgat 39797867  T
Q  280 tttaagttaattctcacatttatgtt 305  Q
    |||||||||| ||||||| |||||||    
T  39797866 tttaagttaactctcacagttatgtt 39797841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 23742057 - 23742157
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc-ttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaa 116  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||||||| |||||| ||||||||| |||||||||    
T  23742057 tctcaaagtttgctttgacacaaggtctatatttatagtaaaagtcctgctttaaaacctataacaaatctgcctaaaatttgtaacaaatctgtaacaa 23742156  T
Q  117 a 117  Q
    |    
T  23742157 a 23742157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25921748 - 25921836
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  25921748 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 25921836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 152 - 297
Target Start/End: Complemental strand, 16776042 - 16775897
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagcc 250  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||  |||  | |||||||| |||||| |||||||||  |||    
T  16776042 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttg-cctcaaacttgaaacctccaatcgtgtcacgttgccttgcc 16775944  T
Q  251 gtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
     ||||||||||||| |||||| | ||||||||||||||||||||||||    
T  16775943 atcgtgccacgattcctgcag-atcctgattttaagttaattctcaca 16775897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2818611 - 2818699
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  2818611 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 2818699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 18186504 - 18186590
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacattt 300  Q
    |||||| ||||||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  18186504 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacttgattttaagttaactctcacattt 18186590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 659829 - 659713
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctg 277  Q
    ||||||||||||||||||||||||| ||||||    ||||| |||||||| |||||||||||||||| |||| ||||||||||| |||||||| ||||||    
T  659829 ccatcgtgccacgatttttccagtgacttgcc--tcaaactgaaacctccaatcgtgccacgttgcctagccatcgtgccacgatttctgcag-aacctg 659733  T
Q  278 attttaagttaattctcaca 297  Q
    |||||||||||| |||||||    
T  659732 attttaagttaactctcaca 659713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4236633 - 4236545
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  4236633 tgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 4236545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 21684905 - 21684969
Alignment:
Q  233 gtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  21684905 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 21684969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 109 - 206
Target Start/End: Original strand, 21684811 - 21684909
Alignment:
Q  109 tgtaacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 206  Q
    |||||||||||||| | |||||||| |||| | |||||  | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21684811 tgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 21684909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 12556200 - 12556285
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctg 88  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||| | || ||||||||||    
T  12556200 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaattttgaaacaaatctg 12556285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38882110 - 38882021
Alignment:
Q  1 tgtttcagccccc-tctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  38882110 tgtttcagcccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 38882021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16776162 - 16776075
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctata-tttatagtaaaagtcctgcttaaaatctgtaacaaatct 87  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||   ||||||||| || |||||||||    
T  16776162 tgtttcagccccctctatctcaaagtttgctcagatacaaggtctatattttatagtaaaagtatcgcttaaaatttggaacaaatct 16776075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20507737 - 20507798
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  20507737 tgtttcagccccctctatctcaaagtttactctgatacaagatctatatttatagtaaaagt 20507798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2174923 - 2174835
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||    ||||||||| || |||||||||||    
T  2174923 tgtttcagccccctctatctccaagtttgctctgatacaaggcctgtatttatagtaaaagcatcgcttaaaatttggaacaaatctgc 2174835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 20504369 - 20504452
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  20504369 aaaactaaaacctccaatcgtgccacgttgcccagctatcgtgccacgatttctgcag-aacctgattttaagttaactctcaca 20504452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21948030 - 21947943
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  21948030 tgtttcagcccc-tctatctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 21947943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31466253 - 31466341
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||| | |||||||||||||  | ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  31466253 tgtttcagccccttttatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtgtcgcttaaaatttggaacaaatctgc 31466341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36402603 - 36402690
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  36402603 tgtttcagccccctctatctcaacgtttactctgatataaggtctatatttatagtaaaagtatcgcttaaaatttg-aacaaatctgc 36402690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 26097735 - 26097676
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||    
T  26097735 tttcagccccctctatctcaaagtttactctgattcaaggtctatatttatagtaaaagt 26097676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 36208582 - 36208524
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  36208582 tttcagccccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaag 36208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 3373332 - 3373377
Alignment:
Q  17 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3373332 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 3373377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10529374 - 10529435
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  10529374 tgtttcaacccactctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 10529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39854487 - 39854427
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  39854487 tgtttcagcccc-tctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 39854427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20043054 - 20042994
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||    
T  20043054 tgtttcagccccctctatctcaaggtttgctatgatacaaagcctatatttatagtaaaag 20042994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 21684768 - 21684824
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  21684768 tgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgc 21684824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 36402762 - 36402845
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||| ||||||||| |||||| | ||||||||||| |||||||  |||||||||||||||| |||||||||||| |||||||    
T  36402762 aaaactgaaacctccaatcgtgctatgttgcccagccatcgtgcctagattctgcagaaacctaattttaagttaactctcaca 36402845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18596651 - 18596590
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||| ||| |||| || |||| |||||||||||||||||||||||||    
T  18596651 tgtttcagccccctctatcccaaggtttactctgattcaaggtctatatttatagtaaaagt 18596590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 31179888 - 31179933
Alignment:
Q  252 tcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  31179888 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 31179933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4410065 - 4410000
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||||| |||||||||||||||||||||||| |||||    
T  4410065 tgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 4410000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17072887 - 17072827
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  17072887 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 17072827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20045014 - 20044954
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||| |||||| ||||||| |||||||| | ||||||||||||||||||    
T  20045014 tgtttcagccccctctgtctcaaggtttgctctgatacaaagcctatatttatagtaaaag 20044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 20507918 - 20508001
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||| |||||| |||||||||| |  ||||||||||||| |||||||| |||||||||||||||| |||||||    
T  20507918 aaaactaaaacctccaatcgtgctacgttgcccaactatcgtgccacgatttctgcagaa-cctgattttaagttaactctcaca 20508001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 21947853 - 21947770
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||| ||||||||| ||||| ||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  21947853 aaaactgaaacctccaatcgtgtcacgttgcctagccatcgtgccacgatttctgcag-aacctgattttaagttaactctcaca 21947770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25904107 - 25904047
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  25904107 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 25904047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 26098528 - 26098587
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||| | |||| || |||| |||||||||||||||||||||||||    
T  26098528 tttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagt 26098587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 297
Target Start/End: Original strand, 31466379 - 31466496
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctc-catcgtgccacgttgcccagccgtcgtgccacgattc-tgcagaaacctg 277  Q
    ||||||||||| ||||||||||||| ||||||  | || || |||| || ||||||||||||||||||  |  |||||||||||||| |||| |||||||    
T  31466379 ccatcgtgccaagatttttccagtgacttgcctcataa-ctgaaacatctcatcgtgccacgttgcccttcaatcgtgccacgattcctgca-aaacctg 31466476  T
Q  278 attttaagttaattctcaca 297  Q
    |||||||||||| |||||||    
T  31466477 attttaagttaactctcaca 31466496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 35 - 89
Target Start/End: Complemental strand, 39798058 - 39798004
Alignment:
Q  35 atacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  39798058 atacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgc 39798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 4409967 - 4409890
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    |||||||||||||||||||||| | || |||||||||||| ||||||  || || || ||| ||||||||||||||||    
T  4409967 aaaaatacgttttatttttatctgccatcgcaccatcgtggcacgattcgatccaattgtggcacgatttttccagtg 4409890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6756498 - 6756437
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||| ||||||||||||||||||  | ||||||||| |||||||| |||||||||||    
T  6756498 tgtttcagctccctctatctcaaagtttaatatgatacaagatctatattaatagtaaaagt 6756437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40221526 - 40221465
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||  ||| |||||||||||||||||||||    
T  40221526 tgtttcagccccctctatctcaaggtttactctgagtcaatgtctatatttatagtaaaagt 40221465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34530941 - 34531001
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||| ||| ||||||||||| ||||||||    
T  34530941 tgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttacagtaaaag 34531001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6661457 - 6661512
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagt 56  Q
    ||||||| ||| ||||||||||| |||| || ||||||||||||||||||||||||    
T  6661457 tgtttcaaccctctctatctcaaggtttactctgatacaaggtctatatttatagt 6661512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 37706057 - 37706116
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| |||| |  |||||||| |||||||||||||| ||||||    
T  37706057 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaagt 37706116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 659850 - 659929
Alignment:
Q  162 tcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgtt 242  Q
    ||||||||| ||| |||| |||||||||||||||||||||||| ||||||    ||||| |||||||| |||||||||||||    
T  659850 tcgtgccacaatgcgacctcatcgtgccacgatttttccagtgacttgcc--tcaaactgaaacctccaatcgtgccacgtt 659929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10474598 - 10474655
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaa 58  Q
    |||||||||||||||||| |||| |||| |  |||||||| |||||||||||||||||    
T  10474598 tgtttcagccccctctatttcaaggtttacactgatacaatgtctatatttatagtaa 10474655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18511487 - 18511547
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||  |||||||  | |||||||||||||||||||||| ||||    
T  18511487 tgtttcagccccctctatctctcaaagtttagtctgatacaaggtctatatttatattaaa 18511547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 39854394 - 39854317
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||||||||||||||    | |||||||||||||||||||| ||  | | |||| ||||||||||||||||    
T  39854394 aaaaatacgttttatttttatcttcaatcgcaccatcgtgccacgatgcgattcaaccgtgacacgatttttccagtg 39854317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41585981 - 41586042
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| |||||||| |||| || ||||||||   |||||||||||||||||||    
T  41585981 tgtttcagccccctttatctcaaggtttactctgatacaaaacctatatttatagtaaaagt 41586042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 12556358 - 12556441
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||| ||||||||| | |||||||||||||||||| |  |||||||| |||||||| ||||||||||||| |||| |||||||    
T  12556358 aaaactgaaacctccaattgtgccacgttgcccagccattatgccacgatttctgcag-aacctgattttaaattaactctcaca 12556441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18469015 - 18468950
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  18469015 tgtttcagccccctctatctctctcaaagtttatcatgatacaaggtctatatttatagtaaaagt 18468950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24126860 - 24126800
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||| |||||||||| |||| |  ||||| || ||||||||||||||||||||    
T  24126860 tgtttcagccccatctatctcaaggtttacactgatataatgtctatatttatagtaaaag 24126800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18509593 - 18509652
Alignment:
Q  1 tgtttcagcccc-ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||| || | |||||||||||  | |||||||||||||||||||||||||||    
T  18509593 tgtttcagcccctctatctctcaaagtttagtctgatacaaggtctatatttatagtaaa 18509652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 2723961 - 2723911
Alignment:
Q  11 ccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  2723961 ccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 2723911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 2818763 - 2818836
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagtt 287  Q
    |||||| ||||||||| |||||||| |||||| |||| ||||||||||| |||||||| ||||| ||||||||||    
T  2818763 aaaactgaaacctccaatcgtgccatgttgcctagccatcgtgccacgatttctgcag-aacctaattttaagtt 2818836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18466688 - 18466625
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||    
T  18466688 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 18466625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 2144899 - 2144928
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  2144899 tgatacaaggtctatatttatagtaaaagt 2144928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 6744971 - 6744894
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||||||||||||||    | |||||||||||  ||||||  || || |||||| ||||||||||||||||    
T  6744971 aaaaatacgttttatttttatcttcaatcgcaccatcgtagcacgattcgatccaatcgtggcacgatttttccagtg 6744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 6747214 - 6747137
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||||||||||||||    | |||||||||||| ||||||  || || |||||| ||||| ||||||||||    
T  6747214 aaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgacttttccagtg 6747137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 10586811 - 10586782
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  10586811 tgatacaaggtctatatttatagtaaaagt 10586782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 15552207 - 15552178
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  15552207 tgatacaaggtctatatttatagtaaaagt 15552178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 25803988 - 25803959
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  25803988 tgatacaaggtctatatttatagtaaaagt 25803959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 27910417 - 27910388
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  27910417 tgatacaaggtctatatttatagtaaaagt 27910388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 27912502 - 27912473
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  27912502 tgatacaaggtctatatttatagtaaaagt 27912473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 1189921 - 1189949
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  1189921 tgatacaaggtctatatttatagtaaaag 1189949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 6745040 - 6745004
Alignment:
Q  26 tttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||| |||||||||||||||||||||||| |||||    
T  6745040 tttgctctgatacaaggtctatatttatagtgaaagt 6745004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 6747283 - 6747247
Alignment:
Q  26 tttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||| |||||||||||||||||||||||| |||||    
T  6747283 tttgctctgatacaaggtctatatttatagtgaaagt 6747247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 29748313 - 29748285
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  29748313 tgatacaaggtctatatttatagtaaaag 29748285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31472888 - 31472948
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||| ||||||||||||||||| |||| |  | |||||| ||| ||||||||||||||||    
T  31472888 tgttttagccccctctatctcaaggtttacactaatacaatgtccatatttatagtaaaag 31472948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 42238123 - 42238047
Alignment:
Q  128 aaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||||  ||||||||   | ||||||||||||||||| || ||   ||||||| ||||||||||||||||    
T  42238123 aaaatacgtttttgttttatcctcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 42238047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 33 - 297
Target Start/End: Complemental strand, 43081986 - 43081722
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaat 132  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  43081986 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcttaaaatctgtaacaaaactataacaaatctgctcccaaagat 43081887  T
Q  133 acgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatc 232  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43081886 acgttttatttttatccgccagcgtaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatc 43081787  T
Q  233 gtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43081786 gtgccactttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 43081722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 33 - 297
Target Start/End: Complemental strand, 43079614 - 43079347
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaa---ctgtaacaaatctgctcccaaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||   || |||||||||||||||||||    
T  43079614 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcttaaaatctgtaaaaaaaaaactataacaaatctgctcccaaa 43079515  T
Q  130 aatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc 229  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43079514 gatacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtaccacgatttttccagtgccttgcccaaaaaactaaaacctcc 43079415  T
Q  230 atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43079414 atcgtgccacgttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 43079347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 308 - 578
Target Start/End: Complemental strand, 23286134 - 23285864
Alignment:
Q  308 gcaagcatccatatttaaatttacattctaaagcctaaacttgtttgttgtagtaactaatttcttgatgttgtcatgttgcacatttcagaggcacgaa 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||| ||    
T  23286134 gcaagcatccatatttaaatttacattctaaagcctaaacttgtttgttgtagtaactaaatacttgatgttgttatgttgcacatttcagtggcaccaa 23286035  T
Q  408 ggctatatcgtcttgcaccatttcagaaacggcaagtatattctagattgataaaggaagatatgggtctaccgatatttgatttttcaatccttgttaa 507  Q
    || ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  23286034 ggttatatcgtcgtgcaccatttcagaaaaggcaagtatattcgagattgataaaggaagacatggatctaccgatatttgatttttcaatccttgttaa 23285935  T
Q  508 agccactaataacttttctagcagcaataaacttggggaaggtggatttggaccagtgtataaggtaatat 578  Q
    ||||||| ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  23285934 agccacttataacttctctagcacaaataaacttggggaaggtggatttggaccagtgtataaggtaatat 23285864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 327 - 578
Target Start/End: Original strand, 23392453 - 23392704
Alignment:
Q  327 tttacattctaaagcctaaacttgtttgttgtagtaactaatttcttgatgttgtcatgttgcacatttcagaggcacgaaggctatatcgtcttgcacc 426  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||    
T  23392453 tttacattcaaaagcctaaacttgtttgttgtagtaatgaatttcttgatgttgtcatgttgcacatttcagtggcaccaaggttatatcgtcgtgcacc 23392552  T
Q  427 atttcagaaacggcaagtatattctagattgataaaggaagatatgggtctaccgatatttgatttttcaatccttgttaaagccactaataacttttct 526  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23392553 atttcagaaacggcaagtatattctagattaataaaggaagacatggatctaccgatatttgctttttcaatccttgttaaagccactaataacttttct 23392652  T
Q  527 agcagcaataaacttggggaaggtggatttggaccagtgtataaggtaatat 578  Q
    ||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  23392653 agcacaagtaaacttggggaaggtggatttggaccagtgtataaggtaatat 23392704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 18812953 - 18812668
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    |||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||||||||    |||||||| ||||||||||||||| |||||||||    
T  18812953 tgtttcagcctcctctatctccaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgctcaaaatctgt 18812854  T
Q  101 aacaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 200  Q
    ||||||           ||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18812853 aacaaa-----------tctgcacccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcc 18812765  T
Q  201 agtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  18812764 agtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattcttcagaaacctgattttaagttaactctcaca 18812668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 18810768 - 18810483
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    |||||||| ||||||||||||||| |||||||||    
T  18810768 tgtttcagccccctctatctccaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgctcaaaatctgt 18810669  T
Q  101 aacaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 200  Q
    ||||||           ||||| |||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  18810668 aacaaa-----------tctgcacccaaaaatgtgttttatttttatccgccagcgcaccatcgtgccacgatgtgaccccatcgtgccgcaatttttcc 18810580  T
Q  201 agtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18810579 agtgccttgcctaaaaaaataaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 18810483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 44720903 - 44720617
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44720903 tgtttcagccccctctatctcaaagtttgctttgatataaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgt 44720804  T
Q  101 aacaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 200  Q
    ||           ||||||||| |||||||||| ||||   ||||  | | ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44720803 aa-----------caaatctgcacccaaaaatatgtttctgtttttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcc 44720715  T
Q  201 agtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcag-aaacctgattttaagttaattctcaca 297  Q
    ||| ||||| ||  |||||| |||||||| | ||||||||  ||||||||  || |||||||||||||||| ||||||||||||||||||| |||||||    
T  44720714 agtaccttg-cctcaaaactgaaacctccaaacgtgccacaatgcccagcaatcatgccacgattctgcagaaaacctgattttaagttaactctcaca 44720617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 27826968 - 27826782
Alignment:
Q  112 aacaaatctgctcccaaaaatacgtttta-tttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||||  |||||  | | ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  27826968 aacaaatctgcactcaaaaatatgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgc 27826869  T
Q  211 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
       ||||| | ||||||||||||||||||||||||||||  ||||||||||||| |||||| | |||||||||||||||| |||||||    
T  27826868 ttcaaaaaatgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcctgattttaagttaactctcaca 27826782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 27829279 - 27829093
Alignment:
Q  112 aacaaatctgctcccaaaaatacgtttta-tttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||||  |||||  | | ||||||||||||||||||||||| || ||||||||||||||||||||||||||  ||||    
T  27829279 aacaaatctgcactcaaaaatatgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgttttgc 27829180  T
Q  211 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    |  ||||| | ||||||||||||||||||||||||||||  ||||||||||||| |||||| | |||||||||||||||| |||||||    
T  27829179 ctcaaaaaatgaaacctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcctgattttaagttaactctcaca 27829093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 152 - 289
Target Start/End: Complemental strand, 14807693 - 14807556
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagcc 250  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||  |||  | |||||||| |||||| ||||||||||| ||    
T  14807693 cagcgcaccaccgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtgtcacgttgcccaacc 14807595  T
Q  251 gtcgtgccacgattctgcagaaacctgattttaagttaa 289  Q
     || |||||||||||||||||||||||||||||||||||    
T  14807594 atcatgccacgattctgcagaaacctgattttaagttaa 14807556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 152 - 298
Target Start/End: Original strand, 12517420 - 12517566
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagcc 250  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||| | ||| ||  |||||| |||||||| ||||||||||||||||  |||    
T  12517420 cagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtacattg-cctcaaaactgaaacctccaatcgtgccacgttgccttgcc 12517518  T
Q  251 gtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacat 298  Q
     ||||||||||||| |||||| | |||||||||||||||| ||||||||    
T  12517519 atcgtgccacgattcctgcag-atcctgattttaagttaactctcacat 12517566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14807811 - 14807723
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  14807811 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 14807723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 276
Target Start/End: Original strand, 3886322 - 3886419
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacct 276  Q
    ||||||| ||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| |||||| || || |||||||||||||||||||    
T  3886322 ccatcgtaccacgatttttccagtgtcttgcctcaaaaaactgaaacctccatcgtgccacgttgtccagccatcatgtcacgattctgcagaaacct 3886419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4424078 - 4423990
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||   ||||||||| || |||||||||||    
T  4424078 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctgtatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 4423990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2468373 - 2468461
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||   |||||| || || |||||||||||    
T  2468373 tgtttcagctccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaacatttggaacaaatctgc 2468461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3886193 - 3886277
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 85  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||   ||||||||| || |||||||    
T  3886193 tgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaat 3886277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 112 - 289
Target Start/End: Complemental strand, 15067963 - 15067785
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttttattt-ttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||||  || ||  | | |||||||||||||||||||| || || ||||||||| || ||||||||||||| ||||     
T  15067963 aacaaatctgcacccaaaaatacgtttttgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcatgatttttccagtggcttg- 15067865  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaa 289  Q
    |   |||||| |||||||| ||||||||| ||||||||||| || |||||||||| ||||| ||| |||||||||||||||    
T  15067864 cttcaaaactgaaacctccaatcgtgccatgttgcccagccatcttgccacgattcctgca-aaatctgattttaagttaa 15067785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27827046 - 27826958
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||   ||||||||| || |||||||||||    
T  27827046 tgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 27826958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27829357 - 27829269
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||   ||||||||| || |||||||||||    
T  27829357 tgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 27829269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 490 - 580
Target Start/End: Complemental strand, 23342115 - 23342025
Alignment:
Q  490 tttttcaatccttgttaaagccactaataacttttctagcagcaataaacttggggaaggtggatttggaccagtgtataaggtaatattg 580  Q
    |||| ||||| |||||||||| ||   ||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  23342115 ttttccaatcattgttaaagcaaccggtaatttttctagcagaaataaacttggggaaggtggatttggaccagtttataaggtaatattg 23342025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 490 - 580
Target Start/End: Original strand, 23385019 - 23385109
Alignment:
Q  490 tttttcaatccttgttaaagccactaataacttttctagcagcaataaacttggggaaggtggatttggaccagtgtataaggtaatattg 580  Q
    |||| ||||| |||||||||| |||  ||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  23385019 ttttccaatcattgttaaagcaactggtaatttttctagcagaaataaacttggggaaggtggatttggaccggtttataaggtaatattg 23385109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 15072692 - 15072506
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||| ||| ||||||||||||||| | || ||  | | |||||||||||| ||||||| || || ||||||||| ||||||||||| |||| ||||     
T  15072692 aacaaatttgcacccaaaaatacgtttctgttattcgctgccagcgcaccatcatgccacgttgcgatcccatcgtgacacgatttttctagtggcttg- 15072594  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    |   |||||| |||||||| |||||| |||||||||||||| ||||| ||||||| |||||| || ||||||||||||||| |||||||    
T  15072593 cttcaaaactgaaacctccaatcgtgtcacgttgcccagccatcgtgtcacgattcctgcag-aatctgattttaagttaactctcaca 15072506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15072770 - 15072686
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 85  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||   ||||||||| || |||||||    
T  15072770 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaat 15072686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28251842 - 28251930
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  28251842 tgtttcaacccactctatctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 28251930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 159 - 289
Target Start/End: Original strand, 28251988 - 28252118
Alignment:
Q  159 ccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgc 257  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| ||| ||  |||  | |||||||| ||||| |||||||||| |||| ||||||    
T  28251988 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtaccacgttgcctagccatcgtgc 28252086  T
Q  258 cacgatt-ctgcagaaacctgattttaagttaa 289  Q
    ||||||| |||||| | ||||||||||||||||    
T  28252087 cacgattcctgcag-atcctgattttaagttaa 28252118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 4423952 - 4423834
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctg 277  Q
    |||||||||||||||||||||||||||||| ||  |||||| |||||||| || |||||||||||||||||  | ||||||||||| |||||| | | ||    
T  4423952 ccatcgtgccacgatttttccagtgccttg-ccttaaaactgaaacctccaattgtgccacgttgcccagcaattgtgccacgattcctgcag-atcttg 4423855  T
Q  278 attttaagttaattctcacat 298  Q
    |||||||||||| ||||||||    
T  4423854 attttaagttaactctcacat 4423834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15068041 - 15067953
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||| |||||||||||||||   |||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||    
T  15068041 tgtttcagccccttctatctcaaagtttaggttgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 15067953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 181597 - 181536
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||||    
T  181597 tgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagt 181536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26775261 - 26775200
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||||    
T  26775261 tgtttcagccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagt 26775200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43530188 - 43530123
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||||    
T  43530188 tgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 43530123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12517299 - 12517385
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 85  Q
    |||||||||||||||||||||  |||||||||| ||||||||||| ||||| ||||||||||||   ||||||||| || |||||||    
T  12517299 tgtttcagccccctctatctctcaaagtttgctctgatacaaggtatatatatatagtaaaagtatcgcttaaaatttggaacaaat 12517385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13858759 - 13858820
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||||||||||||||| |||| || |||||||| |||||||||||||||||||||    
T  13858759 tgtttcatccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 13858820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14419466 - 14419527
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| |  |||||||| |||||||||||||||||||||    
T  14419466 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagt 14419527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14477336 - 14477276
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||| ||||||||||||||| ||||||| |||||||| | ||||||||||||||||||    
T  14477336 tgtttcaaccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaag 14477276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33541663 - 33541723
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  33541663 tgtttcagccccctctatctcaatgtttacactgatacaatgtctatatttatagtaaaag 33541723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35872653 - 35872713
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  35872653 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 35872713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 31162267 - 31162212
Alignment:
Q  7 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| |||||| |||| || ||||||||||||||||||||||||||||||    
T  31162267 agccccctctttctcaaggtttactatgatacaaggtctatatttatagtaaaagt 31162212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1225226 - 1225165
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| |  |||||||| | |||||||||||||||||||    
T  1225226 tgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagtaaaagt 1225165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 22684953 - 22685002
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  22684953 ctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 22685002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27911075 - 27911014
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| | ||||||||| ||| |||||||| ||||||||    
T  27911075 tgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagt 27911014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27957494 - 27957433
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| | ||||||||| ||| |||||||| ||||||||    
T  27957494 tgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagt 27957433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41382733 - 41382672
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| |||||| |||||||||| |||| || |||| |||||||||||||||||||||||||    
T  41382733 tgttttagccccatctatctcaaggtttactctgattcaaggtctatatttatagtaaaagt 41382672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41384804 - 41384744
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| ||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  41384804 tgtttcagcccc-tctatctcaatttttactttgattcaaggtctatatttatagtaaaagt 41384744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21482382 - 21482322
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||| || |||||||||||||||| || ||||||||  |||||||||||||||||||    
T  21482382 tgtttcagtccactctatctcaaagtttactctgatacaaattctatatttatagtaaaag 21482322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25952581 - 25952521
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| |  |||||||||||||||||    
T  25952581 tgtttcagccccctctatctcaaggtttcctctgatacaaagcttatatttatagtaaaag 25952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27107172 - 27107232
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| ||||    |||||||| ||||||||||||||||||||    
T  27107172 tgtttcagccccctctatctcaaggtttatactgatacaatgtctatatttatagtaaaag 27107232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5623013 - 5623073
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| ||||  | ||||||||   ||||||||||||||||||    
T  5623013 tgtttcagccccctctatctcaaggtttattctgatacaaaacctatatttatagtaaaag 5623073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 6376032 - 6375988
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||| |||| || ||||||||||||||||||||||||||||||    
T  6376032 tctcaatgtttactctgatacaaggtctatatttatagtaaaagt 6375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32339369 - 32339304
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  32339369 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 32339304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36865598 - 36865538
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctt-tgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||||||||||| || |||| | | |||||||| |||||||||||||||||||    
T  36865598 tgtttcagccccctctatcttaaggtttacatctgatacaatgtctatatttatagtaaaa 36865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15185985 - 15186046
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||| | ||| |||||||| |||| || |||||||| || ||||||||||||||||||    
T  15185985 tgtttcagtcacctttatctcaaggtttactctgatacaaagtttatatttatagtaaaagt 15186046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 15809243 - 15809214
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  15809243 tgatacaaggtctatatttatagtaaaagt 15809214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 17847556 - 17847527
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  17847556 tgatacaaggtctatatttatagtaaaagt 17847527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 24873494 - 24873523
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  24873494 tgatacaaggtctatatttatagtaaaagt 24873523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 28283532 - 28283561
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  28283532 tgatacaaggtctatatttatagtaaaagt 28283561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30480778 - 30480838
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||| |||| |||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  30480778 tgtttcaaccccttctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 30480838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 47179717 - 47179428
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaat 96  Q
    |||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47179717 tgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctacttaaaat 47179618  T
Q  97 ctgtaacaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgattt 196  Q
    ||||||||||           |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  47179617 ctgtaacaaa-----------tctgctcccaaaaatacgttttatttttatccgcaagcgcaccatcgtgccacgatgagaccccatcgtgccacgattt 47179529  T
Q  197 ttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcac 296  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47179528 tttcagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcac 47179429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 47177366 - 47177078
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaat 96  Q
    |||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47177366 tgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctacttaaaat 47177267  T
Q  97 ctgtaacaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgattt 196  Q
    ||||||||||           |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47177266 ctgtaacaaa-----------tctgctcccaaaaataggttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgattt 47177178  T
Q  197 ttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcac 296  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  47177177 ttccagtgtcttgccca-aaaactaaaacctccatcgtgccacgttgcccagtcgtcgtgccacgattctgcagaaacctgattttaagttaactctcac 47177079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 16226171 - 16225895
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  16226171 tgttttagacccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctacttaaaatctgt 16226072  T
Q  101 aacaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 200  Q
    ||||||           ||||| ||||||| || |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16226071 aacaaa-----------tctgcacccaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcc 16225984  T
Q  201 agtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16225983 agtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccaaccgtcgtgccacgattctgcagaaacctgattttaagttaa 16225895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 23783533 - 23783238
Alignment:
Q  23 aagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgc 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||||    
T  23783533 aagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaatctgc 23783434  T
Q  123 tcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgcca---------------------cgatttttcca 201  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||                     |||||||||||    
T  23783433 tcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 23783334  T
Q  202 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  23783333 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23783238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 16231605 - 16231368
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16231605 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgt 16231506  T
Q  101 aacaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 200  Q
    ||           ||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||                     |||||||||    
T  16231505 aa-----------caaatctgcacccaaaaatatgttttatttttatccgccagcgcaccatcgtgccac---------------------gatttttcc 16231438  T
Q  201 agtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcag 270  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16231437 agtgtcttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcag 16231368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 51752291 - 51752104
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  51752291 aacaaatctgcacccaaaaatacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcggccccatcgtgccacgatttttccagtgccttgc 51752192  T
Q  211 c-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    | ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||    
T  51752191 ctcaaaaaactgaaacctccatcgtgccacgttgcccaaccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 51752104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 13761763 - 13761577
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  ||| |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  13761763 aacaaatctgcacccaaaaatacgtttctgttattcgccgccagcacaccatcgtgccgcgatgcgaccccatcgtgccacgatttttccagtgccttgc 13761664  T
Q  211 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |  ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  13761663 ctcaaaaactgaaacctccatcatgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 13761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 51749965 - 51749778
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  51749965 aacaaatctgcacccaaaaatacgtttctgttattcgccgccagcgcactatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 51749866  T
Q  211 c-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    | ||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||    
T  51749865 ctcaaaaaactgaaacctccatcgtaccacgttgcccaaccatcgtgccacgattctgcagaaacttgattttaagttaactctcaca 51749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 112 - 277
Target Start/End: Complemental strand, 6823810 - 6823643
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  ||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  6823810 aacaaatctgcacccaaaaatacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcatgccacgatttttccagtgccttgc 6823711  T
Q  211 c-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctg 277  Q
    | ||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||| |||||||    
T  6823710 ctcaaaaaactgaaacctccatcgtgccacgttgcccaaccatcgtgccatgattctgcaaaaacctg 6823643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 20302385 - 20302198
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||| ||| |||||||||| |||| | || ||  ||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  20302385 aacaaatatgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgc 20302286  T
Q  211 c-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    | ||||||||| ||||||||||||||||||||||||  ||| || |||| |||||||||||||| ||||||||||||||| |||||||    
T  20302285 ctcaaaaaactgaaacctccatcgtgccacgttgccttgccatcatgccgcgattctgcagaaatctgattttaagttaactctcaca 20302198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 6822893 - 6822775
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 278  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6822893 ccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctga 6822794  T
Q  279 ttttaagttaattctcaca 297  Q
    ||||||||||| |||||||    
T  6822793 ttttaagttaactctcaca 6822775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 10400183 - 10400369
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  | | ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  10400183 aacaaatctgcacccaaaaatacgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatatttccagtgctttgc 10400282  T
Q  211 ccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |  |||   | ||||||||| |||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| |||||||    
T  10400283 ctcaaact-tgaaacctccaatcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctcaca 10400369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 153 - 298
Target Start/End: Complemental strand, 15823430 - 15823285
Alignment:
Q  153 agcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccg 251  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||| ||  |||  | |||||||| |||||||||||||||||||||     
T  15823430 agcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttctagtgctttg-cctcaaacttgaaacctccaatcgtgccacgttgcccagcca 15823332  T
Q  252 tcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacat 298  Q
    ||||||||||||| |||||| | |||||||||||||||| ||||||||    
T  15823331 tcgtgccacgattcctgcag-atcctgattttaagttaactctcacat 15823285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 192 - 298
Target Start/End: Complemental strand, 20291386 - 20291279
Alignment:
Q  192 gatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaat 290  Q
    ||||||||||||||| |||| ||||||||| ||||||||| ||||||||||||||  ||| |||||||||||||||||||||| |||||||||||||||     
T  20291386 gatttttccagtgccatgcctcaaaaaactgaaacctccaccgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaac 20291287  T
Q  291 tctcacat 298  Q
    ||||||||    
T  20291286 tctcacat 20291279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 112 - 289
Target Start/End: Complemental strand, 28840604 - 28840426
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||| | |||||  | | |||| |||||||||||||||||| || ||||||||||||| ||||||||||| |||||     
T  28840604 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacaatttttccagtaccttg- 28840506  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaa 289  Q
    || ||||||| |||||||| ||||||||||||||||  ||| ||||||||||||| |||||| | ||||||||||||||||    
T  28840505 cctaaaaactgaaacctccaatcgtgccacgttgccttgccatcgtgccacgattcctgcag-atcctgattttaagttaa 28840426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51750043 - 51749955
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  51750043 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 51749955  T

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Target: chr1; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51752369 - 51752281
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  51752369 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 51752281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 157 - 289
Target Start/End: Complemental strand, 28842373 - 28842241
Alignment:
Q  157 caccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgt 255  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||||| |||||||| |||||||||||| |||  ||| ||||    
T  28842373 caccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttg-cctaaaaactgaaacctccaatcgtgccacgtagccttgccatcgt 28842275  T
Q  256 gccacgatt-ctgcagaaacctgattttaagttaa 289  Q
    ||||||||| || ||| | ||||||||||||||||    
T  28842274 gccacgattcctacag-atcctgattttaagttaa 28842241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 41646922 - 41646836
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  41646922 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 41646836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6823019 - 6822931
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||   ||||||||| || |||||||||||    
T  6823019 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgc 6822931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13215085 - 13214997
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  13215085 tgtttcagccccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 13214997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13761841 - 13761753
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  13761841 tgtttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 13761753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15823550 - 15823462
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  15823550 tgtttcagccccctttatctctaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 15823462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28207343 - 28207431
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  28207343 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 28207431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38925755 - 38925843
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || || ||||||||    
T  38925755 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaataaatctgc 38925843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20302463 - 20302402
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  20302463 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttataataaaagt 20302402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10400105 - 10400193
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||   ||||||||| || |||||||||||    
T  10400105 tgtttcagccccctctatctcccagtttgctctgatacaaggtctatatttatagaaaaagtttcgcttaaaatttggaacaaatctgc 10400193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47451652 - 47451564
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||   |||||| || || |||||||||||    
T  47451652 tgtttaagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaatatttggaacaaatctgc 47451564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6823889 - 6823800
Alignment:
Q  1 tgtttcagccccc-tctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||   ||||||||| || |||||||||||    
T  6823889 tgtttcagcccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgc 6823800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2617520 - 2617460
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  2617520 tgtttcagcctcctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 2617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39462523 - 39462435
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||  |||||||||||||||| || |||||||||||||||||||||||| |||||  | |||||||| || |||||||||||    
T  39462523 tgtttcagccttctctatctcaaagtttactctgatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgc 39462435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 28840665 - 28840594
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  28840665 tctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 28840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 28842499 - 28842413
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 85  Q
    |||||||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||   ||||||||| || |||||||    
T  28842499 tgtttcagccccctctatctctcaaagtttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaat 28842413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14098247 - 14098329
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaa 83  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||  | |||||||| || |||||    
T  14098247 tgtttcagtcccctctatctcaaagtttagtttgatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaa 14098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 30790673 - 30790759
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||| ||||||||||||| |||| || |||||||| |||||||||||||||||||||   ||||||||| || |||||||||||    
T  30790673 tttcagctccctctatctcaaggtttactctgatacaatgtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 30790759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 49495476 - 49495537
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||    
T  49495476 tgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 49495537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25251552 - 25251611
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||    
T  25251552 tgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaa 25251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18800846 - 18800907
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||    
T  18800846 tgtttcagccccttgtatctcaaggtttactctgatacaaggtctatatttatagtaaaagt 18800907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20291461 - 20291400
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| | |||||||||||||| |||||| | ||||||||||||||||||||||||||||    
T  20291461 tgtttcatctccctctatctcaaaatttgctctaatacaaggtctatatttatagtaaaagt 20291400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 24325648 - 24325599
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  24325648 ctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 24325599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28998530 - 28998591
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| ||||||||||||||||| || |||| ||| |||||||||||||||||||||    
T  28998530 tgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaagt 28998591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29004246 - 29004307
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| ||||||||||||||||| || |||| ||| |||||||||||||||||||||    
T  29004246 tgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaagt 29004307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11457752 - 11457812
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  11457752 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 11457812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14183863 - 14183923
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||| ||||||||||| |||| || ||||||| |||||||||||||||||||||    
T  14183863 tgtttcagccctctctatctcaaggtttactctgatacatggtctatatttatagtaaaag 14183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 15295137 - 15295183
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||    
T  15295137 ctctctctcaaagtttgctctgatacaaggtctatatttatagtaaa 15295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 17186407 - 17186465
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| ||||||| ||||||||  |||||||||||| ||||||    
T  17186407 tttcagccccctctatctcaaggtttgctctgatacaaaatctatatttatattaaaag 17186465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 38925915 - 38925996
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctca 295  Q
    |||||| ||||||||| |||||||||||||||||||| |||| |||||| |||||| | |||||||||||||||||| |||||    
T  38925915 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgatttctgc-ggaacctgattttaagttaactctca 38925996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 13449919 - 13449996
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||||||||||||||   || |||||||||||| ||||||  || || |||||| ||||||||||||||||    
T  13449919 aaaaatacgttttatttttatctaccatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtg 13449996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 3579903 - 3579979
Alignment:
Q  9 ccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 85  Q
    |||||||||||||||| ||| |  |||||||||||||||||||| |||||||||   ||||||||| || |||||||    
T  3579903 ccccctctatctcaaattttacgctgatacaaggtctatatttaaagtaaaagtatcgcttaaaatttggaacaaat 3579979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 47451488 - 47451405
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||| ||||||||| ||||||||| |||||||||| ||||||||||| ||||||| ||| ||||||| ||||||| |||||||    
T  47451488 aaaactgaaacctccaatcgtgccacattgcccagccatcgtgccacgatttctgca-aaatctgatttgaagttaactctcaca 47451405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50079098 - 50079158
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  50079098 tgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 50079158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50248849 - 50248909
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||| ||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  50248849 tgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 50248909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17318897 - 17318838
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| || ||||||||   |||||||||||||||||    
T  17318897 tgtttcagccccctctatctcaaggtttactatgatacaaaacctatatttatagtaaaa 17318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18307113 - 18307054
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| |  |||||||| |||||||||||||| ||||    
T  18307113 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaa 18307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25248791 - 25248850
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| || |||||||| |||||||||| ||| ||||    
T  25248791 tgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttctagaaaaa 25248850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 28207421 - 28207500
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgcca 190  Q
    ||||||||||| |||||||| |||||| | || ||  ||| |||||||||||||||||||| || |||||||||||||||    
T  28207421 aacaaatctgcacccaaaaaaacgtttatgttattcgccgccagcgcaccatcgtgccacgttgtgaccccatcgtgcca 28207500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 30790749 - 30790848
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| |  |||||||||||| | |||||  ||  |||||||||||||||||||  || || |||||||||||||| ||||||||||| |||||    
T  30790749 aacaaatctgcactgaaaaatacgtttatgtttttcccctccagcgcaccatcgtgccacattgcgatcccatcgtgccacgttttttccagtgacttgc 30790848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 153 - 298
Target Start/End: Complemental strand, 39462402 - 39462257
Alignment:
Q  153 agcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccg 251  Q
    ||||||||||||||||||  ||  | |||||||||||||||    |||| || ||||||  |||| || ||||||| | ||||||||||||||||| ||     
T  39462402 agcgcaccatcgtgccacattgcaatcccatcgtgccacgaaaaatccactgacttgcctcaaaa-ctgaaacctctaatcgtgccacgttgcccaacca 39462304  T
Q  252 tcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacat 298  Q
    | ||| ||||||| |||||||| |||||||||||||||| ||||||||    
T  39462303 ttgtgtcacgatttctgcagaa-cctgattttaagttaactctcacat 39462257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 264
Target Start/End: Complemental strand, 13215007 - 13214854
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttttatttttatcc-gtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||||  || | | | | || | ||||||||||||||| ||  | |||||| ||||||||    ||||||| |||||    
T  13215007 aacaaatctgcacccaaaaatacgtttttgttatttgctgccaacacaccatcgtgccacgttgcaatcccatcatgccacgaaaaatccagtgacttgc 13214908  T
Q  211 ccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgatt 264  Q
    |  |||| || ||||||||| ||||||||||||||||| || |||||||||||||    
T  13214907 ctcaaaa-ctgaaacctccaatcgtgccacgttgcccaaccatcgtgccacgatt 13214854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 14098441 - 14098510
Alignment:
Q  228 ccatcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||| ||| ||||| ||||||||||| |||||||| || ||||||||||||||| |||||||    
T  14098441 ccatcgtgccacggtgctcagccatcgtgccacgatttctgcag-aatctgattttaagttaactctcaca 14098510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6995977 - 6996038
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||| ||||||||||||||||  ||| || |||| ||||||||||||||||| |||||||    
T  6995977 tgtttcggccccctctatctcaagatttactctgattcaaggtctatatttataataaaagt 6996038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21948464 - 21948526
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||    |||||||  | |||||||||||||||||||||||||||    
T  21948464 tgtttcagccccctctatctctctcaaagtttagtatgatacaaggtctatatttatagtaaa 21948526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31423151 - 31423212
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| |  |||||||| |  ||||||||||||||||||    
T  31423151 tgtttcagccccctctatctcaaggtttacactgatacaatgcttatatttatagtaaaagt 31423212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39932077 - 39932017
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||  |||||||  | | |||||||||||||||||||||||||    
T  39932077 tgtttcagccccctctatctctcaaagttttgtctcatacaaggtctatatttatagtaaa 39932017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 48665167 - 48665114
Alignment:
Q  9 ccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| || |||| || |||| |||||||||||||||||||||||||    
T  48665167 ccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagt 48665114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2510601 - 2510666
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  2510601 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 2510666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 16431096 - 16431044
Alignment:
Q  10 cccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| ||||||| ||||||||   |||||||||||||||||||    
T  16431096 cccctctatctcaaggtttgctctgatacaaaacctatatttatagtaaaagt 16431044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18839591 - 18839531
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||  |||| |  | |||||| ||||||||||||||||||||    
T  18839591 tgtttcagccccctctatctcatggtttacaataatacaatgtctatatttatagtaaaag 18839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31489919 - 31489859
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||| ||||||||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  31489919 tgtttcaaccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 31489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 49687384 - 49687301
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||| ||||||||| | |||||||||||||||||| || |||||||| |||| ||  |||||||||||||||||| |||||||    
T  49687384 aaaactgaaacctccaattgtgccacgttgcccagccatcatgccacgatttctaca-taacctgattttaagttaactctcaca 49687301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50076949 - 50077009
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||  |||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  50076949 tgtttcagccctttctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 50077009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 42922236 - 42922177
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| |||||||||||| || |||| || ||||||||  ||||||||||||||||||||    
T  42922236 tttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagt 42922177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8347546 - 8347607
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgc-tttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||||||||||||||| |||| | | ||||||||||||||| ||||||||||||||    
T  8347546 tgtttcaaccccctctatctcaaggtttacatctgatacaaggtctat-tttatagtaaaagt 8347607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9241362 - 9241424
Alignment:
Q  1 tgtttcagcccc-ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||| || |||| || |||||||| | |||||||||||||||||||    
T  9241362 tgtttcagcccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagt 9241424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 26520403 - 26520449
Alignment:
Q  9 ccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    ||||||||||||||| |||| || |||||||| ||||||||||||||    
T  26520403 ccccctctatctcaaggtttactctgatacaaagtctatatttatag 26520449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 50307826 - 50307884
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| | |||||||| |||| ||||||||||| |  |||||||||||||||||    
T  50307826 tttcagccccatatatctcaaggtttactttgatacaaagcttatatttatagtaaaag 50307884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2949508 - 2949569
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| ||  ||| |||  ||||||||||| ||||||||    
T  2949508 tgtttcagccccctctatctcaaggttttctcggattcaatatctatatttattgtaaaagt 2949569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 9459732 - 9459761
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  9459732 tgatacaaggtctatatttatagtaaaagt 9459761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 9463559 - 9463588
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  9463559 tgatacaaggtctatatttatagtaaaagt 9463588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 12302819 - 12302848
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  12302819 tgatacaaggtctatatttatagtaaaagt 12302848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16428657 - 16428596
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||| |  ||||||| ||||| ||   |||||||||||||||||||    
T  16428657 tgtttcagccccctctatctaatggtttgctctgatataaaacctatatttatagtaaaagt 16428596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 26613517 - 26613577
Alignment:
Q  3 tttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||  || ||||  | ||||||||||||||||||||||| |||||    
T  26613517 tttcagccccctctatctctcaaggtttcatctgatacaaggtctatatttatagcaaaag 26613577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 31735834 - 31735863
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  31735834 tgatacaaggtctatatttatagtaaaagt 31735863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 43104131 - 43104102
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  43104131 tgatacaaggtctatatttatagtaaaagt 43104102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 46432037 - 46432066
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  46432037 tgatacaaggtctatatttatagtaaaagt 46432066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 47906236 - 47906207
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  47906236 tgatacaaggtctatatttatagtaaaagt 47906207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8349325 - 8349385
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgc-tttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||| ||||||||||| |||||| | | ||||||| |||||||||||| |||||    
T  8349325 tgtttcagccctctctatctcaaggtttgcatctaatacaagatctatatttataataaaa 8349385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 15669669 - 15669729
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctt-tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||| ||| |||| | | || |||||||||| ||||||||||||||||    
T  15669669 tttcagccccctctatcccaatgtttacatctgctacaaggtctgtatttatagtaaaagt 15669729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17324069 - 17324009
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||| ||||| ||||||||||| |||| || | |||||| ||||||||||||| ||||||    
T  17324069 tgttttagccctctctatctcaaggtttactctaatacaaagtctatatttataataaaag 17324009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 26068590 - 26068882
Alignment:
Q  17 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaa--- 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||       
T  26068590 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgctttaaatttgtaacaaatctgtaacaa 26068689  T
Q  114 ---------caaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
             ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26068690 aaacggtaacaaatctgctcccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 26068789  T
Q  205 ccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26068790 ccttgcccaaaaaactaaaacctccatcatgccacgttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 26068882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 26066319 - 26066611
Alignment:
Q  17 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa---------- 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||              
T  26066319 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctactttaaatttgtaacaaatctgtaacaa 26066418  T
Q  107 --actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
      |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26066419 aaactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcgcaccattgtgccacgatgagaccccatcgtgccacgatttttccagtg 26066518  T
Q  205 ccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  26066519 ccttgcccaaataactaaaacctccatcgtgccacgttgccttgccgtcgtgccacgattctacagaaacctgattttaagttaactctcaca 26066611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 33311235 - 33310954
Alignment:
Q  28 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa------------actgtaaca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||            |||||||||    
T  33311235 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaactgtaaca 33311136  T
Q  116 aatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaa 215  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33311135 aatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaa 33311036  T
Q  216 aaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33311035 aaactaaaacctccatcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 33310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 297
Target Start/End: Original strand, 29754983 - 29755279
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc-ttaaa----------atctgta 101  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||          |||||||    
T  29754983 ctctctctcagagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgccttaaatttgtaacaaatctgta 29755082  T
Q  102 acaaaa-ctgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 200  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29755083 acaaaaactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcc 29755182  T
Q  201 agtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  29755183 agtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 29755279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 28 - 297
Target Start/End: Complemental strand, 33308966 - 33308685
Alignment:
Q  28 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaa---------- 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||||              
T  33308966 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaaaaatgtaaca 33308867  T
Q  118 --tctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaa 215  Q
      |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33308866 aatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaa 33308767  T
Q  216 aaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33308766 aaactaaaacctccatcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 33308685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 152 - 297
Target Start/End: Original strand, 14507569 - 14507716
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc--ccaaaaaactaaaacctccatcgtgccacgttgcccagc 249  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||   | |||||||| ||||||||||||||||||||||||||||    
T  14507569 cagcgcaccatcgtgccacgatgcgaccccatcgtgccaccatttttccagtgccttgtatcaaaaaaactgaaacctccatcgtgccacgttgcccagc 14507668  T
Q  250 cgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    | |||||||||||||||||||||| ||||||||||||||| |||||||    
T  14507669 catcgtgccacgattctgcagaaatctgattttaagttaactctcaca 14507716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 150 - 298
Target Start/End: Complemental strand, 8995402 - 8995254
Alignment:
Q  150 gtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccag 248  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  8995402 gtcagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgccca-aaaactgaaacctccaatcgtgccacgttgcccag 8995304  T
Q  249 ccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacat 298  Q
    || ||||||||||||| || ||| | |||||||||||||||| ||||||||    
T  8995303 ccatcgtgccacgattcctacag-atcctgattttaagttaactctcacat 8995254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 150 - 298
Target Start/End: Complemental strand, 9019849 - 9019701
Alignment:
Q  150 gtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccag 248  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  9019849 gtcagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgccca-aaaactgaaacctccaatcgtgccacgttgcccag 9019751  T
Q  249 ccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacat 298  Q
    || ||||||||||||| || ||| | |||||||||||||||| ||||||||    
T  9019750 ccatcgtgccacgattcctacag-atcctgattttaagttaactctcacat 9019701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 152 - 297
Target Start/End: Original strand, 19227803 - 19227948
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccg 251  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| | ||||||||||| |||||||||||||| ||     
T  19227803 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaattgaaacctccatcatgccacgttgcccaacca 19227902  T
Q  252 tcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||||| |||||| | | | |||||||||||| |||||||    
T  19227903 tcgtgccacgattcctgcag-atcttaattttaagttaactctcaca 19227948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 33 - 240
Target Start/End: Original strand, 4816552 - 4816749
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaaactgtaacaaatctgctcccaaaaat 132  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||          ||| ||||||||||||||| || ||||||    
T  4816552 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaa----------aaatctgtaacaaatctgcaccaaaaaat 4816641  T
Q  133 acgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-at 231  Q
    | ||||   ||||  |   |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||  |||||| |||||||| ||    
T  4816642 atgtttctgtttttgctaccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtaccttg-cctcaaaactgaaacctccaat 4816740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 112 - 289
Target Start/End: Original strand, 11983382 - 11983558
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||| | |||||  | | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |      
T  11983382 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc--tta 11983479  T
Q  211 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 289  Q
    ||  | |||| ||||||||||||| ||| |||||||| || |||| |||||||||||||||||||||||||||||||||    
T  11983480 cctcacaactgaaacctccatcgtaccatgttgcccaaccatcgtaccacgattctgcagaaacctgattttaagttaa 11983558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 20915665 - 20915736
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaaca 104  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20915665 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgtaaca 20915736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12195790 - 12195851
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12195790 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 12195851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11983304 - 11983392
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   | ||||||| || |||||||||||    
T  11983304 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgtttaaaatttgaaacaaatctgc 11983392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30729103 - 30729191
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||| |||| || ||||||||| |||||||||||||||||||| | ||||||||| || |||||||||||    
T  30729103 tgtttcagccccctctatctcaaggtttactctgatacaagatctatatttatagtaaaagtaccgcttaaaatttggaacaaatctgc 30729191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14507450 - 14507536
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 87  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||   ||||||||| || |||||||||    
T  14507450 tgttttagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatct 14507536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1072152 - 1072240
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||| || ||||||||||||||| || |||||||| |||||||||||||||||||||  |||||||||| || |||||||||||    
T  1072152 tgtttcagctccttctatctcaaagtttactctgatacaatgtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgc 1072240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15532956 - 15533044
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||    |||||||| || |||||||||||    
T  15532956 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtataacttaaaatttggaacaaatctgc 15533044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15541415 - 15541503
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||    |||||||| || |||||||||||    
T  15541415 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtgtaacttaaaatttggaacaaatctgc 15541503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 299
Target Start/End: Original strand, 15530516 - 15530663
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagcc 250  Q
    |||| |||||||||||||||||| | ||||||||| |||||| ||||| ||||| |||||  |||   | ||||||||| | |||||||||| |||||||    
T  15530516 cagcacaccatcgtgccacgatgcggccccatcgtaccacgaattttcgagtgctttgcctcaaact-tgaaacctccaattgtgccacgttacccagcc 15530614  T
Q  251 gtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacatt 299  Q
     ||||||||||||| |||||| | |||||||||||||||| |||||||||    
T  15530615 atcgtgccacgattcctgcag-atcctgattttaagttaactctcacatt 15530663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28241596 - 28241657
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  28241596 tgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaagt 28241657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19227683 - 19227771
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||    |||||||| || |||||||||||    
T  19227683 tgtttgagccccctttatctcaaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttggaacaaatctgc 19227771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 14459042 - 14459093
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttata 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14459042 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1230524 - 1230585
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  1230524 tgtttcaaccctctctatctcaaagtttgctatgatacaaggtctatatttatagtgaaagt 1230585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 15530400 - 15530485
Alignment:
Q  4 ttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||  ||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||| ||||    
T  15530400 ttcagccccctctatctcccagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaacctgc 15530485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8995518 - 8995430
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||| |||||||||||||||  ||||| || ||||||||| ||||||||||||||||||||   ||||||||| || |||||||||||    
T  8995518 tgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 8995430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9019965 - 9019877
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||| |||||||||||||||  ||||| || ||||||||| ||||||||||||||||||||   ||||||||| || |||||||||||    
T  9019965 tgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 9019877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 298
Target Start/End: Original strand, 1072312 - 1072396
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcacat 298  Q
    |||||| ||||||||| ||||||||||||||||| || |||| |||||| |||||||| |||||||||||||||||| ||||||||    
T  1072312 aaaacttaaacctccaatcgtgccacgttgcccaaccatcgtaccacgatttctgcag-aacctgattttaagttaactctcacat 1072396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17852581 - 17852520
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||| ||| |||||||||||||||||||||    
T  17852581 tgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaagt 17852520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3630139 - 3630199
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||  ||| | ||||||||| ||||||||||||||||||||    
T  3630139 tgtttcagccccctctatctcaagttttacattgatacaatgtctatatttatagtaaaag 3630199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13057233 - 13057173
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  13057233 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 13057173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24338723 - 24338783
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  24338723 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 24338783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32280035 - 32279948
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||| |||||||| |||||| || ||||||||||||||||| ||||| ||||||   ||||||||| || |||||||||||    
T  32280035 tgtttcagcccc-tctatctccaagtttactatgatacaaggtctatatatataggaaaagtatcgcttaaaatttggaacaaatctgc 32279948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32447591 - 32447651
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| | ||||||||||||||||||    
T  32447591 tgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttatagtaaaag 32447651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 3028127 - 3028186
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| | |||||||  |||| |||||||||||||||||||||||||||||||||    
T  3028127 tttcagccccttttatctcatggtttactttgatacaaggtctatatttatagtaaaagt 3028186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15346427 - 15346369
Alignment:
Q  4 ttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||| |||| |  |||||||| |||||||||||||||||||||    
T  15346427 ttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagt 15346369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 26084895 - 26084818
Alignment:
Q  127 aaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 204  Q
    ||||||||||||||||||||||    | |||||||||||||||||||| ||  | |||||| ||||||||||||||||    
T  26084895 aaaaatacgttttatttttatcttcaatcgcaccatcgtgccacgatgcgattcaatcgtggcacgatttttccagtg 26084818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25477313 - 25477253
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||| ||||||||    
T  25477313 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaag 25477253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 30729181 - 30729281
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  | | |||||||| ||||||||||| || |||||||||||| |||||  ||||||||| |||||    
T  30729181 aacaaatctgcacccaaaaatacgtttctgttattcgctgccagcgcactatcgtgccacgttgtgaccccatcgtggcacgaaatttccagtgacttgc 30729280  T
Q  211 c 211  Q
    |    
T  30729281 c 30729281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 4816740 - 4816787
Alignment:
Q  252 tcgtgccacgattctgcagaaa-cctgattttaagttaattctcacat 298  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  4816740 tcgtgccacgattctgcagaaaacctgattttaagttaactctcacat 4816787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19704862 - 19704905
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagt 56  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  19704862 ctctctctcaaagtttgctctgatacaaggtctatatttatagt 19704905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3390418 - 3390357
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||||| ||||    |||||||| |||||||||||||||||||||    
T  3390418 tgtttcagccccgtctatctcaaggtttatactgatacaatgtctatatttatagtaaaagt 3390357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 26932857 - 26932906
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| ||| |||||||||||||||||||| |||||    
T  26932857 ctctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 26932906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3234006 - 3234065
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||| || |||| |  |||||||| ||||||||||||||||||||    
T  3234006 tgtttcagccccctctatcttaaggtttacactgatacaa-gtctatatttatagtaaaag 3234065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 12186345 - 12186405
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctt-tgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| |||||||||| |||| | | ||||||||||| ||||||||||||||||||    
T  12186345 tttcagccccttctatctcaaggtttacatgtgatacaaggtttatatttatagtaaaagt 12186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 18318048 - 18318004
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||    
T  18318048 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 18318004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 17012080 - 17012029
Alignment:
Q  4 ttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    ||||| |||||||||||||| |||| ||  ||||||||||||||||||||||    
T  17012080 ttcagacccctctatctcaaggtttactccgatacaaggtctatatttatag 17012029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3632213 - 3632271
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    ||||||| | ||||||||||||| |||| |  |||||||| ||||||||||||||||||    
T  3632213 tgtttcaactccctctatctcaaggtttacactgatacaatgtctatatttatagtaaa 3632271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 2629197 - 2629226
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  2629197 tgatacaaggtctatatttatagtaaaagt 2629226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 30034914 - 30034943
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  30034914 tgatacaaggtctatatttatagtaaaagt 30034943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13039793 - 13039733
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| ||| |||||||| |||| |  ||||||||  |||||||||||||||||||    
T  13039793 tgtttcagcctcctatatctcaaggtttacactgatacaatatctatatttatagtaaaag 13039733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 13870705 - 13870749
Alignment:
Q  10 cccctctatctcaaagtttgctttgatacaaggtctatatttata 54  Q
    |||||||||||||| ||||||| |||||||| | |||||||||||    
T  13870705 cccctctatctcaaggtttgctctgatacaaagcctatatttata 13870749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22490678 - 22490618
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  | || ||| |||||||||||| |||||||    
T  22490678 tgtttcagccccctctatctcaaggtttacactaattcaatgtctatatttatggtaaaag 22490618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 203; Significance: 1e-110; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 6212 - 5927
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||    
T  6212 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaaactgtaacaaatctgctttaaatttgt 6113  T
Q  101 aacaaaactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 200  Q
    ||||||           ||||| |||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  6112 aacaaa-----------tctgcacccaaaaatatgttttatttttatccgccagcgcaccatcgtgccatgatgagaccccatcatgccacgatttttcc 6024  T
Q  201 agtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    ||||||||||| ||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  6023 agtgccttgcctaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 5927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 203; Significance: 1e-110; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 36559067 - 36559358
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  36559067 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 36559166  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36559167 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc 36559266  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  36559267 cttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 36559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 18 - 297
Target Start/End: Original strand, 45332384 - 45332675
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa-tctgtaacaaatctgcttaaaat-----------ctgtaacaa 105  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||           |||||||||    
T  45332384 tctccaagtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaaatctataacaaatctgcctaaaatctgtaacaaatctgtaacaa 45332483  T
Q  106 aactgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| |    
T  45332484 aactgtaacaaatctgctcccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgtgaccccatcgttccacgatttttccagttc 45332583  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45332584 cttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 45332675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 36561344 - 36561532
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  36561344 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 36561443  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgat 194  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  36561444 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgat 36561532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 152 - 289
Target Start/End: Original strand, 19502405 - 19502542
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccg 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||     
T  19502405 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgcca 19502504  T
Q  252 tcgtgccacgattctgcagaaacctgattttaagttaa 289  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19502505 tcgtgccacgattctgcagaaacctgattttaagttaa 19502542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 24162565 - 24162752
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| || | ||  | | |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24162565 aacaaatctgcacccaaaaatacgtttctaatattcgcagccagcgcacaatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 24162664  T
Q  211 c-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    | ||||||||| |||||||||||||||||||||||||| || | ||||||||||||||||||||| |||||||||||||| |||||||    
T  24162665 ctcaaaaaactgaaacctccatcgtgccacgttgcccaaccattgtgccacgattctgcagaaacttgattttaagttaactctcaca 24162752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 159 - 297
Target Start/End: Original strand, 36561539 - 36561677
Alignment:
Q  159 ccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgcc 258  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||    
T  36561539 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgtgaagcccagccgtcgtgcc 36561638  T
Q  259 acgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  36561639 acgattgtgcagaaacctgattttaagttaactctcaca 36561677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 152 - 298
Target Start/End: Original strand, 19504739 - 19504885
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccg 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  |||     
T  19504739 cagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaattaaaacctccatcgtgccacgttgccttgcca 19504838  T
Q  252 tcgtgccacgattctgcagaaacctgattttaagttaattctcacat 298  Q
    |||||||| |||||||| |||||||||||||||||||| | ||||||    
T  19504839 tcgtgccatgattctgctgaaacctgattttaagttaactttcacat 19504885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 112 - 289
Target Start/End: Complemental strand, 27104701 - 27104523
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| | |||||||| |||| | |||||  | | ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  27104701 aacaaatctgcactcaaaaatatgtttatgtttttccctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgc 27104602  T
Q  211 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 289  Q
    |  ||||||| |||||||||||||||||||||||||  |  |||||||||||||||||||||| |||||||||||||||    
T  27104601 ctcaaaaactgaaacctccatcgtgccacgttgcccttcaatcgtgccacgattctgcagaaatctgattttaagttaa 27104523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 21521048 - 21521234
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  | | |||||||||||||||||||| || || ||||||||| |||||||||||||||| ||||     
T  21521048 aacaaatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcacgatttttccagtggcttg- 21521146  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    |   |||||| |||||||| ||||||||||||||||||||| ||||||||||||| ||| || |||||||||||||||||| |||||||    
T  21521147 cttcaaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattcctgtag-aacctgattttaagttaactctcaca 21521234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 43623968 - 43624077
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 278  Q
    ||||||||||||||||||| ||||||||||||  |||| || ||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  43623968 ccatcgtgccacgattttttcagtgccttgcctcaaaa-ctgaaacctccaatcgtgccatgttgcccagccatcgtgccatgattctgcagaaacctga 43624066  T
Q  279 ttttaagttaa 289  Q
    |||||||||||    
T  43624067 ttttaagttaa 43624077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24162487 - 24162575
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  24162487 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgc 24162575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27104779 - 27104691
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  27104779 tgtttcagccccctctatctcaaagttttctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 27104691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 152 - 297
Target Start/End: Complemental strand, 42064376 - 42064231
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagcc 250  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||  |||  | ||||||||| |||| ||||||||||||||     
T  42064376 cagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccagtcgtaccacgttgcccagca 42064278  T
Q  251 gtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
     ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  42064277 atcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 42064231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 112 - 294
Target Start/End: Original strand, 6259168 - 6259351
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||| ||||| |||||||||| |||| | || ||  ||| ||||||||||||||| |||| || || |||||||||||||||||||||||||| |||      
T  6259168 aacaagtctgcacccaaaaatatgtttctgttattcaccgccagcgcaccatcgtgtcacgttgcgatcccatcgtgccacgatttttccagtgactt-t 6259266  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctc 294  Q
    ||  |||||| |||| ||| || |||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||| ||||    
T  6259267 cctcaaaactgaaacatccaatagtgccacgttgcacagccatcgtgccacgatttctgcag-aacctgattttaagttaactctc 6259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13910319 - 13910407
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    |||||||| || |||||||||||    
T  13910319 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgc 13910407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19504620 - 19504708
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    |||||||| || |||||||||||    
T  19504620 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgc 19504708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40032333 - 40032421
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||  || |||||||||||    
T  40032333 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaacttggaacaaatctgc 40032421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42064495 - 42064407
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  42064495 tgtttcagctccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 42064407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6264420 - 6264508
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||| |   ||||||||| || |||||||||||    
T  6264420 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaaatatcgcttaaaatttggaacaaatctgc 6264508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22287611 - 22287695
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 85  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||   ||||||||| || |||||||    
T  22287611 tgtttcagccccctatatctcaaagtttactttaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaat 22287695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45280260 - 45280321
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  45280260 tgtttcagccccctctatctcaaagtttgctctgatacaaggtatatatttatagtgaaagt 45280321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22407684 - 22407772
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||| |||| ||||||| ||||| || ||||||||||||||||||||||||||||||  |||||||||| |  |||||||||||    
T  22407684 tgtttcagcaccctatatctcacagtttactctgatacaaggtctatatttatagtaaaagtattgcttaaaattttgaacaaatctgc 22407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 40032503 - 40032586
Alignment:
Q  215 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  40032503 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgatttctgcag-aacctgattttaagttaactctcaca 40032586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43623843 - 43623931
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||| |||||||||||||  ||||| || ||||||||||||||| ||||||||||||||  |||||||||| || |||||||||||    
T  43623843 tgtttcacccccctctatctcccagtttactctgatacaaggtctatttttatagtaaaagtattgcttaaaatttggaacaaatctgc 43623931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 19502286 - 19502345
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  19502286 tgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaa 19502345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 13910397 - 13910491
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
    ||||||||||| | |||||||| |||| | |||||  | | ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  13910397 aacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgc 13910491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42452763 - 42452702
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| |||||||    
T  42452763 tgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttataataaaagt 42452702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22163222 - 22163282
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||| |  |||||||| ||||||||||||||||||||    
T  22163222 tgtttcagccccctctatctcaaagtttacactgatacaatgtctatatttatagtaaaag 22163282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12342685 - 12342746
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||||||| || ||||||||||||||||||    
T  12342685 tgtttcagccccctctatctcaaggtttactctgatacaatgtgtatatttatagtaaaagt 12342746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37963202 - 37963263
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || | |||||| |||||||||||||||||||||    
T  37963202 tgtttcagccccctctatctcaaggtttactcttatacaaagtctatatttatagtaaaagt 37963263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6259090 - 6259178
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||| || |||||||||||||||||  | | ||||||||||||||||||||||||||||   ||||||||| || ||||| |||||    
T  6259090 tgtttcatcctcctctatctcaaagtttagtctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaagtctgc 6259178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18800577 - 18800665
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||| |||||| | |||| |  ||||||||||||||||||||||||||||||   | ||||||| || |||||||||||    
T  18800577 tgtttcagccccctatatctccatgtttaccctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaacaaatctgc 18800665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19007620 - 19007560
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| | ||||||||||||||||||    
T  19007620 tgtttcagccccctctatctcaaggtttactatgatacaaagcctatatttatagtaaaag 19007560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31733040 - 31733100
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || || ||||| ||||||||||||||||||||    
T  31733040 tgtttcagccccctctatctcaatgtttactctgttacaaagtctatatttatagtaaaag 31733100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 6264546 - 6264655
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctg 277  Q
    ||||||||||||||||||||||||| |||| ||  |||||| |||| ||| ||| |||||||||||||| || |||||| || | |||||||| ||||||    
T  6264546 ccatcgtgccacgatttttccagtgacttg-cctcaaaactgaaacatccaatcatgccacgttgcccaaccatcgtgcaacaatttctgcag-aacctg 6264643  T
Q  278 attttaagttaa 289  Q
    ||||||||||||    
T  6264644 attttaagttaa 6264655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17849097 - 17849037
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| || |||||||||||||||||    
T  17849097 tgtttcagccccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaag 17849037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 297
Target Start/End: Original strand, 22407762 - 22407948
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  | | || ||||||||||||||||| || || ||||||||||||| |||||| || || ||||     
T  22407762 aacaaatctgcacccaaaaatacgtttctgttattcgctgccaacgcaccatcgtgccacgttgtgatcccatcgtgccacaattttttcactgacttg- 22407860  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    ||  |||||| |||| ||| ||||||||| ||| |||  |  ||||||||||||| |||||| ||||| ||||||| |||| |||||||    
T  22407861 cctcaaaactgaaacatccaatcgtgccatgttacccttcaatcgtgccacgattcctgcag-aacctaattttaaattaactctcaca 22407948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28196617 - 28196557
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| |  |||||||||||||||||    
T  28196617 tgtttcagccccctctatctcaatgtttactctgatacaaagcatatatttatagtaaaag 28196557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21520968 - 21521058
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||| ||||||||  |||||||  | ||||||||||| ||||||||||||||||||   ||||||| | || |||||||||||    
T  21520968 tgtttcagccccatctatctctcaaagtttagtctgatacaaggtttatatttatagtaaaagtatcgcttaaattttggaacaaatctgc 21521058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 20147040 - 20147082
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  20147040 tctcaaggtttactttgatacaaggtctatatttatagtaaaa 20147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3022143 - 3022086
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaa 58  Q
    |||||||||| ||| |||||||| |||| || |||||||| |||||||||||||||||    
T  3022143 tgtttcagcctcctatatctcaaggtttactctgatacaaagtctatatttatagtaa 3022086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22874122 - 22874061
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| | ||||||| |||||||| | || ||||||||| ||||||    
T  22874122 tgtttcagccccctctatctccaggtttgctctgatacaaagcctgtatttatagcaaaagt 22874061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 5377725 - 5377769
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||    
T  5377725 tctcaaagtttgctctgaaacaaggtctatatttatagtgaaagt 5377769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11578379 - 11578439
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||| |||||||||||  ||| |  ||||| |||||||||||||||||||||||    
T  11578379 tgtttcagcccactctatctcaagatttaccctgatataaggtctatatttatagtaaaag 11578439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11739835 - 11739895
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||| |||||||||||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  11739835 tgttccagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 11739895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14837253 - 14837193
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||| ||||||||||||| |||| |  |||||||| ||||||||||| ||||||||    
T  14837253 tgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaag 14837193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 35107268 - 35107192
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||| ||||| |||| || |||||||| |||||||||||||||||||||    |||||||| || |||||||||||    
T  35107268 ctctacctcaaggtttactatgatacaatgtctatatttatagtaaaagtatcccttaaaatttggaacaaatctgc 35107192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42923784 - 42923847
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| ||||||||||  || |||| || |||| |||||||||||||||||||||||||    
T  42923784 tgtttcagcctcctctatctctcaaggtttactatgattcaaggtctatatttatagtaaaagt 42923847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15539750 - 15539809
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||| |||||| |||||||| |||| |  |||||||| |||||||||||||||||||    
T  15539750 tgtttcaaccccctatatctcaaggtttacactgatacaatgtctatatttatagtaaaa 15539809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 20146906 - 20146941
Alignment:
Q  25 gtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||| |||||||||||||||||||||||||||||||    
T  20146906 gtttactttgatacaaggtctatatttatagtaaaa 20146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 17897549 - 17897578
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  17897549 tgatacaaggtctatatttatagtaaaagt 17897578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 23452548 - 23452577
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  23452548 tgatacaaggtctatatttatagtaaaagt 23452577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 35215903 - 35215932
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  35215903 tgatacaaggtctatatttatagtaaaagt 35215932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 40699278 - 40699229
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||| |||| || |||| |||||||||||||||||||||||||    
T  40699278 ctctctctcaaggtttactctgatgcaaggtctatatttatagtaaaagt 40699229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 20589609 - 20589581
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  20589609 tgatacaaggtctatatttatagtaaaag 20589581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 28462593 - 28462649
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||| ||||||||||||||||||    |||||||| || |||||||||||    
T  28462593 tgatacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgc 28462649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34979854 - 34979906
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttat 53  Q
    ||||||||||||||||||||||| |||| |  | |||||| ||||||||||||    
T  34979854 tgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttat 34979906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44289343 - 44289403
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||| || ||||||||| |||| ||||||| ||||||||   ||||||||||||||||||    
T  44289343 tgttttagtcccctctatatcaaggtttgctatgatacaaaacctatatttatagtaaaag 44289403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 22206 - 21915
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  22206 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 22107  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22106 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc 22007  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  22006 cttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 21915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 24481 - 24190
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa----------- 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||               
T  24481 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgcctaaaatttgtaacaaatctgtaacaaa 24382  T
Q  107 -actgtaacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 205  Q
     ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24381 aactgtaacaaatctgctcccaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc 24282  T
Q  206 cttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  24281 cttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 24190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 163; Significance: 9e-87; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 111 - 297
Target Start/End: Original strand, 12868 - 13054
Alignment:
Q  111 taacaaatctgctcccaaaaatacgttttatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12868 taacaaatctgctcccaaaaatacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 12967  T
Q  211 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||||||||||| |||||||    
T  12968 ccaaaaaactaaaacctccatcgtgccacgttgccttgacatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 13054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 2815 - 2629
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| ||||||||||||||| | || ||  | | ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||     
T  2815 aacaaatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttg- 2717  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 297  Q
    ||  |||||| |||||||| |||||||||||||||| |||  ||||| ||| ||| |||||| | | |||||||||||||| |||||||    
T  2716 cctcaaaactgaaacctccaatcgtgccacgttgcctagcaatcgtgtcacaattcctgcag-atcttgattttaagttaactctcaca 2629  T

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Target: scaffold0250; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2893 - 2805
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||   ||||||||| || |||||||||||    
T  2893 tgtttcagccccctctatctcaaagtttgctctgatacaagttctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 2805  T

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Target: scaffold0131 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15032 - 14944
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  15032 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgc 14944  T

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Target: scaffold0131; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 296
Target Start/End: Complemental strand, 14954 - 14768
Alignment:
Q  112 aacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 210  Q
    ||||||||||| |||||||||| |||| | || ||  | | ||||||||||||||| |||| || || |||||||||||||||  ||||||||| |||||    
T  14954 aacaaatctgcacccaaaaatatgtttctgttattcgctgccagcgcaccatcgtgtcacgttgtgatcccatcgtgccacgaaatttccagtgacttgc 14855  T
Q  211 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattc-tgcagaaacctgattttaagttaattctcac 296  Q
    |  | || || |||| ||| ||||| |||||||||||  |  |||||||||||||| ||||||| |||||||||||||||| ||||||    
T  14854 ctcataa-ctgaaacttcccatcgttccacgttgcccttcaatcgtgccacgattcctgcagaatcctgattttaagttaactctcac 14768  T

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Target: scaffold0025 (Bit Score: 63; Significance: 4e-27; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 152 - 289
Target Start/End: Original strand, 69688 - 69825
Alignment:
Q  152 cagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagcc 250  Q
    |||| ||||||||||| |||||| || ||||| |||| |||||||||||||||| |||||  |||   | ||||||||| ||||||||||||||| ||||    
T  69688 cagcacaccatcgtgcaacgatgcgatcccattgtgctacgatttttccagtgctttgcctcaaact-tgaaacctccaatcgtgccacgttgcctagcc 69786  T
Q  251 gtcgtgccacgattctgcagaaacctgattttaagttaa 289  Q
     |||||||||||||||||||||| |||||||||||||||    
T  69787 atcgtgccacgattctgcagaaatctgattttaagttaa 69825  T

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Target: scaffold0025; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 289
Target Start/End: Original strand, 73427 - 73536
Alignment:
Q  180 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 278  Q
    |||||||||||| ||||||||||||| |||||  |||   | ||||||||| ||||||||||||||| |||| |||||||||||||||||| ||| ||||    
T  73427 ccatcgtgccacaatttttccagtgctttgcctcaaact-tgaaacctccaatcgtgccacgttgcctagccatcgtgccacgattctgcataaatctga 73525  T
Q  279 ttttaagttaa 289  Q
    |||||||||||    
T  73526 ttttaagttaa 73536  T

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Target: scaffold0025; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 69566 - 69658
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||    |||||||||| ||||| ||||||||||||||| ||||||||   ||||||||| || |||||||||||    
T  69566 tgtttcagccccctctatctctctcaaagtttgctctgatataaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgc 69658  T

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Target: scaffold0025; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 73298 - 73390
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||    ||||||| |||||||||| ||||||||||||||||||||||    |||||||| || |||||||||||    
T  73298 tgtttcagccccctctatctctctcaaagtttcctttgatacacggtctatatttatagtaaaagtatctcttaaaatttggaacaaatctgc 73390  T

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Target: scaffold0339 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4010 - 3922
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  4010 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgc 3922  T

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Target: scaffold0068 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 29005 - 28941
Alignment:
Q  233 gtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 297  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  29005 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 28941  T

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Target: scaffold0068; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 109 - 206
Target Start/End: Complemental strand, 29099 - 29001
Alignment:
Q  109 tgtaacaaatctgctcccaaaaatacgttt-tatttttatccgtcagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 206  Q
    |||||||||||||| | |||||||| |||| | |||||  | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29099 tgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 29001  T

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Target: scaffold0068; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 29142 - 29086
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  29142 tgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgc 29086  T

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Target: scaffold0552 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1106 - 1167
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  1106 tgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 1167  T

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Target: scaffold0038 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41758 - 41819
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  41758 tgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaagt 41819  T

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Target: scaffold0154 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11748 - 11809
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| | |||| || |||| |||||||||||||||||||||||||    
T  11748 tgtttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagt 11809  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52024 - 51961
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||  |||||||  | ||||||||||||||||||||||||||||||    
T  52024 tgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaagt 51961  T

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Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 183915 - 183975
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||  ||||||||||||||| || |||||||||||||||||||||||| |||||    
T  183915 tgtttcagccct-tctatctcaaagtttactctgatacaaggtctatatttatagtgaaagt 183975  T

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Target: scaffold0133 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 4825 - 4773
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    |||||| |||||||||||||| |||| || |||||||||||||||||||||||    
T  4825 tttcagacccctctatctcaaggtttactctgatacaaggtctatatttatag 4773  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 79198 - 79140
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    ||||| |||||||||||||||||  ||| || |||| ||||||||||||||||||||||    
T  79198 tgttttagccccctctatctcaagttttactctgattcaaggtctatatttatagtaaa 79140  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 16924 - 16981
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||    
T  16924 tttcagcctcctctatctcaaggtttactctgatacaaggtttatatttatattaaaa 16981  T

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Target: scaffold0511 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 2032 - 1988
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||    
T  2032 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 1988  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 79872 - 79812
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  ||||||||   ||||||||||||||||||    
T  79872 tgtttcagccccctctatctcaaggtttacactgatacaaaaactatatttatagtaaaag 79812  T

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Target: scaffold0224 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 16095 - 16154
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| |||||||||||| || |||| || ||||||||  ||||||||||||||||||||    
T  16095 tttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagt 16154  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 85231 - 85184
Alignment:
Q  14 tctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| |||| ||||||||||| | ||||||||||||||||||    
T  85231 tctatctcaaggtttactttgatacaaagcctatatttatagtaaaag 85184  T

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