View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8233_low_4 (Length: 564)

Name: NF8233_low_4
Description: NF8233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8233_low_4
NF8233_low_4
[»] chr8 (53 HSPs)
chr8 (276-546)||(23285864-23286134)
chr8 (295-546)||(23392453-23392704)
chr8 (64-265)||(18812668-18812868)
chr8 (64-265)||(18810483-18810683)
chr8 (78-265)||(43079347-43079533)
chr8 (78-265)||(43081722-43081908)
chr8 (1-265)||(27826782-27827046)
chr8 (1-265)||(27829093-27829357)
chr8 (1-257)||(14807556-14807811)
chr8 (1-265)||(44720617-44720903)
chr8 (1-266)||(12517299-12517566)
chr8 (1-265)||(15072506-15072770)
chr8 (1-257)||(15067785-15068041)
chr8 (1-141)||(4423938-4424078)
chr8 (1-244)||(3886193-3886419)
chr8 (1-162)||(28251842-28252002)
chr8 (1-139)||(2468373-2468511)
chr8 (458-548)||(23342025-23342115)
chr8 (458-548)||(23385019-23385109)
chr8 (127-257)||(28251988-28252118)
chr8 (33-89)||(43079558-43079614)
chr8 (33-89)||(43081930-43081986)
chr8 (1-62)||(18810707-18810768)
chr8 (148-266)||(4423834-4423952)
chr8 (1-62)||(181536-181597)
chr8 (1-62)||(18812892-18812953)
chr8 (1-62)||(26775200-26775261)
chr8 (1-62)||(43530123-43530188)
chr8 (1-62)||(13858759-13858820)
chr8 (1-62)||(14419466-14419527)
chr8 (1-61)||(14477276-14477336)
chr8 (1-61)||(33541663-33541723)
chr8 (1-61)||(35872653-35872713)
chr8 (13-172)||(22684953-22685112)
chr8 (7-62)||(31162212-31162267)
chr8 (1-62)||(1225165-1225226)
chr8 (1-62)||(27911014-27911075)
chr8 (1-62)||(27957433-27957494)
chr8 (1-62)||(41382672-41382733)
chr8 (1-62)||(41384744-41384804)
chr8 (1-61)||(21482322-21482382)
chr8 (1-61)||(25952521-25952581)
chr8 (1-61)||(27107172-27107232)
chr8 (1-61)||(5623013-5623073)
chr8 (18-62)||(6375988-6376032)
chr8 (1-62)||(32339304-32339369)
chr8 (1-60)||(36865538-36865598)
chr8 (1-62)||(15185985-15186046)
chr8 (33-62)||(15809214-15809243)
chr8 (33-62)||(17847527-17847556)
chr8 (33-62)||(24873494-24873523)
chr8 (33-62)||(28283532-28283561)
chr8 (1-61)||(30480778-30480838)
[»] chr4 (85 HSPs)
chr4 (1-265)||(9174421-9174684)
chr4 (75-265)||(16932171-16932360)
chr4 (75-270)||(16934525-16934719)
chr4 (33-265)||(11006548-11006781)
chr4 (75-267)||(22783128-22783319)
chr4 (1-265)||(9176749-9177035)
chr4 (75-265)||(22780763-22780952)
chr4 (1-263)||(51015042-51015304)
chr4 (1-257)||(24888598-24888854)
chr4 (1-257)||(37089646-37089906)
chr4 (1-265)||(5637740-5638006)
chr4 (1-265)||(36919860-36920125)
chr4 (1-263)||(22803009-22803270)
chr4 (18-265)||(38408993-38409240)
chr4 (1-265)||(22044665-22044930)
chr4 (1-265)||(31849874-31850138)
chr4 (33-265)||(3824880-3825112)
chr4 (1-265)||(11434769-11435013)
chr4 (1-179)||(5198300-5198478)
chr4 (1-265)||(48486113-48486377)
chr4 (18-267)||(36921787-36922035)
chr4 (1-265)||(18846923-18847211)
chr4 (148-265)||(7941133-7941251)
chr4 (5-89)||(16934422-16934506)
chr4 (1-178)||(22046960-22047135)
chr4 (64-208)||(11008930-11009075)
chr4 (5-89)||(16932068-16932152)
chr4 (1-161)||(619722-619882)
chr4 (1-263)||(40091690-40091952)
chr4 (1-98)||(47274688-47274785)
chr4 (1-97)||(22801137-22801233)
chr4 (4-265)||(9148054-9148308)
chr4 (1-160)||(52942721-52942881)
chr4 (8-211)||(24880299-24880502)
chr4 (1-62)||(44600113-44600174)
chr4 (2-98)||(24878950-24879046)
chr4 (32-89)||(22780687-22780744)
chr4 (32-89)||(22783052-22783109)
chr4 (3-172)||(47868288-47868457)
chr4 (1-62)||(6764836-6764897)
chr4 (1-62)||(40637071-40637132)
chr4 (1-98)||(7941280-7941379)
chr4 (148-242)||(22801262-22801356)
chr4 (3-92)||(8756527-8756616)
chr4 (1-62)||(17662509-17662574)
chr4 (127-257)||(52942869-52942999)
chr4 (3-61)||(18537748-18537806)
chr4 (1-62)||(8631694-8631759)
chr4 (1-62)||(14787706-14787769)
chr4 (1-61)||(19095880-19095940)
chr4 (1-61)||(24446854-24446914)
chr4 (1-60)||(37313341-37313400)
chr4 (1-62)||(2485147-2485209)
chr4 (1-62)||(5100994-5101055)
chr4 (1-62)||(14633317-14633377)
chr4 (13-62)||(25357634-25357683)
chr4 (1-62)||(36378289-36378350)
chr4 (1-61)||(12396120-12396180)
chr4 (1-61)||(12401082-12401142)
chr4 (181-265)||(22048491-22048575)
chr4 (1-62)||(24348211-24348276)
chr4 (1-61)||(38928453-38928513)
chr4 (1-57)||(41997494-41997550)
chr4 (7-62)||(16186118-16186173)
chr4 (1-60)||(33415762-33415821)
chr4 (1-60)||(56030443-56030502)
chr4 (1-55)||(19322701-19322755)
chr4 (1-62)||(15032811-15032872)
chr4 (1-62)||(16453306-16453367)
chr4 (13-62)||(22134917-22134966)
chr4 (1-61)||(3937484-3937543)
chr4 (9-61)||(12102088-12102140)
chr4 (1-61)||(38270261-38270321)
chr4 (33-63)||(11008877-11008907)
chr4 (3-61)||(18535106-18535164)
chr4 (1-61)||(2891314-2891375)
chr4 (4-61)||(6132871-6132928)
chr4 (220-265)||(8528918-8528963)
chr4 (95-172)||(16689303-16689380)
chr4 (33-62)||(22132706-22132735)
chr4 (33-62)||(47211053-47211082)
chr4 (33-62)||(53405124-53405153)
chr4 (96-168)||(4556422-4556494)
chr4 (220-268)||(47868192-47868240)
chr4 (33-61)||(52043737-52043765)
[»] chr1 (78 HSPs)
chr1 (1-257)||(16225895-16226171)
chr1 (1-265)||(47179428-47179717)
chr1 (1-265)||(51752104-51752369)
chr1 (1-265)||(47177078-47177366)
chr1 (1-265)||(51749778-51750043)
chr1 (1-265)||(13761577-13761841)
chr1 (1-265)||(20302198-20302463)
chr1 (1-245)||(6823643-6823889)
chr1 (1-265)||(10400105-10400369)
chr1 (1-266)||(15823285-15823550)
chr1 (1-265)||(6822775-6823019)
chr1 (127-265)||(23783238-23783376)
chr1 (1-238)||(16231368-16231605)
chr1 (18-257)||(28840426-28840665)
chr1 (1-257)||(28842241-28842499)
chr1 (1-158)||(28207343-28207500)
chr1 (1-266)||(39462257-39462523)
chr1 (1-232)||(13214854-13215085)
chr1 (3-178)||(30790673-30790848)
chr1 (160-266)||(20291279-20291386)
chr1 (3-161)||(41646764-41646922)
chr1 (1-98)||(38925755-38925852)
chr1 (23-89)||(23783467-23783533)
chr1 (1-142)||(47451511-47451652)
chr1 (71-142)||(23783382-23783452)
chr1 (1-98)||(14098247-14098343)
chr1 (9-257)||(3579903-3580151)
chr1 (1-141)||(2617382-2617520)
chr1 (1-62)||(49495476-49495537)
chr1 (1-60)||(25251552-25251611)
chr1 (1-62)||(18800846-18800907)
chr1 (1-62)||(20291400-20291461)
chr1 (13-62)||(24325599-24325648)
chr1 (1-62)||(28998530-28998591)
chr1 (1-62)||(29004246-29004307)
chr1 (1-61)||(11457752-11457812)
chr1 (1-61)||(14183863-14183923)
chr1 (33-172)||(13449857-13449996)
chr1 (13-59)||(15295137-15295183)
chr1 (3-61)||(17186407-17186465)
chr1 (183-263)||(38925915-38925996)
chr1 (183-265)||(47451405-47451488)
chr1 (1-61)||(50079098-50079158)
chr1 (1-61)||(50248849-50248909)
chr1 (1-60)||(17318838-17318897)
chr1 (1-60)||(18307054-18307113)
chr1 (1-60)||(25248791-25248850)
chr1 (196-265)||(14098441-14098510)
chr1 (1-62)||(6995977-6996038)
chr1 (1-59)||(21948464-21948526)
chr1 (1-62)||(31423151-31423212)
chr1 (1-59)||(39932017-39932077)
chr1 (9-62)||(48665114-48665167)
chr1 (1-62)||(2510601-2510666)
chr1 (10-62)||(16431044-16431096)
chr1 (1-61)||(18839531-18839591)
chr1 (1-61)||(31489859-31489919)
chr1 (183-265)||(49687301-49687384)
chr1 (1-61)||(50076949-50077009)
chr1 (1-115)||(8347546-8347661)
chr1 (3-62)||(42922177-42922236)
chr1 (1-62)||(9241362-9241424)
chr1 (9-55)||(26520403-26520449)
chr1 (3-61)||(50307826-50307884)
chr1 (1-62)||(2949508-2949569)
chr1 (33-62)||(9459732-9459761)
chr1 (33-62)||(9463559-9463588)
chr1 (33-62)||(12302819-12302848)
chr1 (1-62)||(16428596-16428657)
chr1 (3-61)||(26613517-26613577)
chr1 (33-62)||(31735834-31735863)
chr1 (33-62)||(43104102-43104131)
chr1 (33-62)||(46432037-46432066)
chr1 (33-62)||(47906207-47906236)
chr1 (49-98)||(49687447-49687496)
chr1 (1-60)||(8349325-8349385)
chr1 (3-62)||(15669669-15669729)
chr1 (1-61)||(17324009-17324069)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-265)||(5927-6212)
[»] chr7 (69 HSPs)
chr7 (75-265)||(1047314-1047503)
chr7 (70-265)||(9027493-9027687)
chr7 (70-265)||(2935070-2935264)
chr7 (70-265)||(22136878-22137072)
chr7 (70-265)||(40551905-40552099)
chr7 (70-265)||(22107867-22108061)
chr7 (70-265)||(40549627-40549821)
chr7 (1-266)||(27306504-27306768)
chr7 (1-266)||(25542280-25542544)
chr7 (1-265)||(3878322-3878591)
chr7 (1-265)||(35379-35643)
chr7 (1-265)||(44314-44578)
chr7 (3-265)||(40837019-40837261)
chr7 (1-265)||(18567363-18567627)
chr7 (1-265)||(31435322-31435586)
chr7 (1-141)||(1049570-1049710)
chr7 (148-265)||(26804345-26804462)
chr7 (18-89)||(22108087-22108158)
chr7 (18-89)||(22137098-22137169)
chr7 (18-89)||(40549847-40549918)
chr7 (18-89)||(40552125-40552196)
chr7 (1-169)||(22392319-22392487)
chr7 (18-89)||(9027396-9027467)
chr7 (19-89)||(2935279-2935349)
chr7 (32-89)||(1047238-1047295)
chr7 (1-62)||(31156186-31156247)
chr7 (1-97)||(26804491-26804583)
chr7 (13-62)||(1606423-1606472)
chr7 (151-268)||(1049699-1049816)
chr7 (1-62)||(7188496-7188557)
chr7 (1-62)||(13099751-13099812)
chr7 (1-62)||(42331274-42331335)
chr7 (1-172)||(40946167-40946342)
chr7 (1-62)||(22251817-22251878)
chr7 (1-61)||(21678020-21678080)
chr7 (1-61)||(25276095-25276155)
chr7 (3-62)||(20091818-20091877)
chr7 (13-62)||(1849918-1849967)
chr7 (18-59)||(7092471-7092512)
chr7 (1-59)||(7094697-7094759)
chr7 (1-62)||(22828908-22828969)
chr7 (1-61)||(11355212-11355272)
chr7 (1-61)||(20137384-20137444)
chr7 (1-61)||(21679981-21680041)
chr7 (3-62)||(30906327-30906386)
chr7 (1-60)||(37412403-37412462)
chr7 (1-62)||(443548-443609)
chr7 (1-61)||(4296210-4296271)
chr7 (1-59)||(7470297-7470359)
chr7 (1-59)||(7472255-7472317)
chr7 (1-62)||(3035670-3035735)
chr7 (1-62)||(11757177-11757242)
chr7 (1-62)||(20299407-20299472)
chr7 (1-60)||(24465503-24465563)
chr7 (1-61)||(24748548-24748608)
chr7 (1-62)||(38393935-38394000)
chr7 (1-61)||(39146262-39146322)
chr7 (1-61)||(44724533-44724593)
chr7 (1-60)||(3677235-3677293)
chr7 (1-60)||(21990106-21990164)
chr7 (1-55)||(24258423-24258477)
chr7 (33-62)||(7349586-7349615)
chr7 (33-62)||(18345490-18345519)
chr7 (33-62)||(28485515-28485544)
chr7 (33-62)||(38396239-38396268)
chr7 (33-62)||(43253831-43253860)
chr7 (33-61)||(9680768-9680796)
chr7 (35-91)||(45366470-45366526)
chr7 (1-62)||(48457602-48457667)
[»] chr5 (88 HSPs)
chr5 (64-265)||(34477432-34477632)
chr5 (1-265)||(31544798-31545084)
chr5 (70-265)||(10749505-10749699)
chr5 (70-265)||(10756960-10757154)
chr5 (70-265)||(15354871-15355065)
chr5 (70-265)||(15357147-15357341)
chr5 (71-265)||(31542442-31542636)
chr5 (1-265)||(38881845-38882110)
chr5 (70-266)||(23664833-23665028)
chr5 (70-266)||(23793559-23793754)
chr5 (70-265)||(23667109-23667303)
chr5 (1-257)||(4236378-4236633)
chr5 (70-208)||(31179760-31179897)
chr5 (64-265)||(34479793-34479972)
chr5 (1-265)||(16775897-16776162)
chr5 (1-275)||(25921748-25922002)
chr5 (1-265)||(2174680-2174923)
chr5 (148-265)||(38960487-38960604)
chr5 (33-174)||(21684768-21684909)
chr5 (148-273)||(39797841-39797966)
chr5 (1-89)||(31542651-31542739)
chr5 (1-89)||(31179646-31179734)
chr5 (1-265)||(20507737-20508001)
chr5 (1-265)||(21947770-21948030)
chr5 (18-89)||(23665054-23665125)
chr5 (18-89)||(23793462-23793533)
chr5 (1-98)||(2818611-2818708)
chr5 (21-89)||(15354777-15354845)
chr5 (21-89)||(15357053-15357121)
chr5 (18-89)||(38960334-38960405)
chr5 (24-89)||(10757180-10757245)
chr5 (18-89)||(23667329-23667400)
chr5 (183-268)||(18186504-18186590)
chr5 (1-98)||(31466253-31466350)
chr5 (1-98)||(36402603-36402699)
chr5 (148-265)||(659713-659829)
chr5 (201-265)||(21684905-21684969)
chr5 (25-88)||(10749704-10749767)
chr5 (3-98)||(12556200-12556295)
chr5 (1-172)||(39854317-39854487)
chr5 (1-172)||(4409890-4410065)
chr5 (18-89)||(23742057-23742129)
chr5 (70-141)||(38960431-38960501)
chr5 (1-140)||(6756359-6756498)
chr5 (183-265)||(20504369-20504452)
chr5 (3-62)||(26097676-26097735)
chr5 (35-106)||(39797988-39798058)
chr5 (3-61)||(36208524-36208582)
chr5 (17-62)||(3373332-3373377)
chr5 (1-62)||(10529374-10529435)
chr5 (70-170)||(23742155-23742256)
chr5 (1-61)||(20042994-20043054)
chr5 (183-265)||(36402762-36402845)
chr5 (1-62)||(18596590-18596651)
chr5 (220-265)||(31179888-31179933)
chr5 (1-61)||(17072827-17072887)
chr5 (1-61)||(20044954-20045014)
chr5 (1-61)||(25904047-25904107)
chr5 (3-62)||(26098528-26098587)
chr5 (148-265)||(31466379-31466496)
chr5 (1-62)||(40221465-40221526)
chr5 (1-61)||(34530941-34531001)
chr5 (1-56)||(6661457-6661512)
chr5 (3-62)||(37706057-37706116)
chr5 (130-210)||(659850-659929)
chr5 (26-172)||(6747137-6747283)
chr5 (1-58)||(10474598-10474655)
chr5 (1-59)||(18511487-18511547)
chr5 (1-62)||(41585981-41586042)
chr5 (183-265)||(12556358-12556441)
chr5 (1-62)||(18468950-18469015)
chr5 (1-61)||(24126800-24126860)
chr5 (1-59)||(18509593-18509652)
chr5 (11-61)||(2723911-2723961)
chr5 (183-255)||(2818763-2818836)
chr5 (26-172)||(6744894-6745040)
chr5 (1-60)||(18466625-18466688)
chr5 (95-172)||(1240171-1240248)
chr5 (33-62)||(2144899-2144928)
chr5 (33-62)||(10586782-10586811)
chr5 (33-62)||(15552178-15552207)
chr5 (33-62)||(25803959-25803988)
chr5 (33-62)||(27910388-27910417)
chr5 (33-62)||(27912473-27912502)
chr5 (33-61)||(1189921-1189949)
chr5 (33-61)||(29748285-29748313)
chr5 (1-61)||(31472888-31472948)
chr5 (96-172)||(42238047-42238123)
[»] chr3 (105 HSPs)
chr3 (75-265)||(38210067-38210256)
chr3 (7-265)||(53896475-53896754)
chr3 (1-265)||(6063719-6064006)
chr3 (75-266)||(50493675-50493865)
chr3 (1-265)||(22114578-22114842)
chr3 (1-265)||(18099443-18099707)
chr3 (1-264)||(5191374-5191637)
chr3 (1-265)||(35777163-35777405)
chr3 (64-208)||(25388654-25388797)
chr3 (64-253)||(5899471-5899659)
chr3 (64-265)||(5885983-5886184)
chr3 (3-265)||(26720268-26720530)
chr3 (1-265)||(1321161-1321425)
chr3 (1-142)||(6066069-6066210)
chr3 (1-265)||(5522888-5523152)
chr3 (1-270)||(10956300-10956568)
chr3 (1-163)||(3859350-3859512)
chr3 (1-266)||(32264312-32264581)
chr3 (1-265)||(18097173-18097422)
chr3 (1-265)||(11162891-11163134)
chr3 (1-172)||(10958596-10958767)
chr3 (1-265)||(11170145-11170388)
chr3 (1-89)||(50493895-50493983)
chr3 (148-266)||(38889756-38889875)
chr3 (180-265)||(7606878-7606963)
chr3 (1-172)||(45882752-45882923)
chr3 (1-100)||(15780745-15780844)
chr3 (13-89)||(6719396-6719472)
chr3 (1-172)||(4308554-4308725)
chr3 (136-257)||(10192401-10192521)
chr3 (1-106)||(24979587-24979691)
chr3 (1-98)||(48361943-48362040)
chr3 (18-145)||(10084683-10084810)
chr3 (18-144)||(10191603-10191729)
chr3 (136-257)||(10085481-10085601)
chr3 (3-265)||(24176999-24177261)
chr3 (1-139)||(32218941-32219079)
chr3 (1-172)||(35918222-35918393)
chr3 (148-265)||(6719532-6719651)
chr3 (33-89)||(25388794-25388850)
chr3 (1-168)||(43228108-43228275)
chr3 (1-172)||(51727279-51727450)
chr3 (1-91)||(12268239-12268329)
chr3 (11-98)||(18162551-18162639)
chr3 (33-88)||(38210265-38210320)
chr3 (1-62)||(1313333-1313394)
chr3 (1-62)||(43226009-43226070)
chr3 (164-207)||(6066211-6066254)
chr3 (1-60)||(51675028-51675087)
chr3 (1-55)||(6561740-6561794)
chr3 (64-141)||(6719469-6719546)
chr3 (220-265)||(25388618-25388663)
chr3 (1-89)||(38889935-38890024)
chr3 (1-62)||(53915769-53915830)
chr3 (1-61)||(1626956-1627016)
chr3 (220-268)||(3859314-3859362)
chr3 (10-62)||(53597164-53597216)
chr3 (3-61)||(28180948-28181006)
chr3 (1-62)||(13420445-13420506)
chr3 (1-62)||(23633383-23633444)
chr3 (1-62)||(28761701-28761762)
chr3 (190-265)||(32218836-32218912)
chr3 (1-62)||(51943294-51943355)
chr3 (1-62)||(53917937-53917998)
chr3 (1-61)||(880725-880785)
chr3 (1-61)||(28137568-28137628)
chr3 (1-61)||(43423736-43423796)
chr3 (1-61)||(47701868-47701928)
chr3 (198-265)||(48362119-48362186)
chr3 (1-60)||(27635900-27635959)
chr3 (3-61)||(3314608-3314666)
chr3 (26-172)||(27101558-27101704)
chr3 (64-106)||(38889897-38889938)
chr3 (1-62)||(4560538-4560599)
chr3 (1-62)||(6484308-6484369)
chr3 (23-172)||(25690651-25690800)
chr3 (1-62)||(4104168-4104233)
chr3 (1-61)||(5927037-5927097)
chr3 (31-91)||(13893287-13893347)
chr3 (1-61)||(28100314-28100374)
chr3 (1-61)||(36011751-36011811)
chr3 (1-61)||(53468728-53468788)
chr3 (1-61)||(53591119-53591179)
chr3 (1-60)||(3306724-3306783)
chr3 (1-60)||(6231374-6231433)
chr3 (95-142)||(9604979-9605026)
chr3 (3-61)||(31151271-31151330)
chr3 (1-60)||(43421688-43421747)
chr3 (501-543)||(1076815-1076857)
chr3 (501-543)||(1300163-1300205)
chr3 (13-62)||(27101472-27101519)
chr3 (33-62)||(455826-455855)
chr3 (33-62)||(458203-458232)
chr3 (33-62)||(746674-746703)
chr3 (33-62)||(10621847-10621876)
chr3 (33-62)||(25533357-25533386)
chr3 (13-62)||(29956587-29956636)
chr3 (13-62)||(30005742-30005791)
chr3 (31-60)||(31021450-31021479)
chr3 (33-62)||(42990205-42990234)
chr3 (1-61)||(890044-890104)
chr3 (1-61)||(28102275-28102335)
chr3 (10-62)||(39715393-39715445)
chr3 (33-61)||(47149205-47149233)
chr3 (9-61)||(54691854-54691906)
[»] chr6 (52 HSPs)
chr6 (70-265)||(33310954-33311148)
chr6 (76-265)||(33308685-33308873)
chr6 (77-265)||(26068695-26068882)
chr6 (70-265)||(29755085-29755279)
chr6 (70-265)||(26066417-26066611)
chr6 (1-265)||(14507450-14507716)
chr6 (1-265)||(19227683-19227948)
chr6 (1-257)||(11983304-11983558)
chr6 (1-266)||(8995254-8995518)
chr6 (1-266)||(9019701-9019965)
chr6 (4-267)||(15530400-15530663)
chr6 (1-179)||(30729103-30729281)
chr6 (17-89)||(26068590-26068662)
chr6 (17-87)||(26066319-26066389)
chr6 (13-89)||(29754983-29755059)
chr6 (70-208)||(4816612-4816749)
chr6 (1-98)||(1072152-1072249)
chr6 (1-62)||(12195790-12195851)
chr6 (1-98)||(15532956-15533053)
chr6 (1-98)||(15541415-15541512)
chr6 (28-89)||(33308905-33308966)
chr6 (28-89)||(33311174-33311235)
chr6 (33-89)||(4816552-4816608)
chr6 (33-89)||(20915665-20915721)
chr6 (1-62)||(28241596-28241657)
chr6 (1-140)||(32279897-32280035)
chr6 (3-54)||(14459042-14459093)
chr6 (1-62)||(1230524-1230585)
chr6 (183-266)||(1072312-1072396)
chr6 (1-62)||(17852520-17852581)
chr6 (1-61)||(3630139-3630199)
chr6 (1-61)||(13057173-13057233)
chr6 (1-61)||(24338723-24338783)
chr6 (1-61)||(32447591-32447651)
chr6 (3-62)||(3028127-3028186)
chr6 (33-172)||(26084818-26084957)
chr6 (4-62)||(15346369-15346427)
chr6 (1-61)||(25477253-25477313)
chr6 (220-266)||(4816740-4816787)
chr6 (13-56)||(19704862-19704905)
chr6 (1-62)||(3390357-3390418)
chr6 (13-62)||(26932857-26932906)
chr6 (1-61)||(3234006-3234065)
chr6 (3-62)||(12186345-12186405)
chr6 (18-62)||(18318004-18318048)
chr6 (4-55)||(17012029-17012080)
chr6 (1-59)||(3632213-3632271)
chr6 (33-62)||(2629197-2629226)
chr6 (33-62)||(30034914-30034943)
chr6 (1-61)||(13039733-13039793)
chr6 (10-54)||(13870705-13870749)
chr6 (1-61)||(22490618-22490678)
[»] chr2 (51 HSPs)
chr2 (1-265)||(24162487-24162752)
chr2 (70-265)||(36559164-36559358)
chr2 (1-257)||(27104523-27104779)
chr2 (1-266)||(19504620-19504885)
chr2 (1-257)||(19502286-19502542)
chr2 (75-265)||(45332486-45332675)
chr2 (1-265)||(42064231-42064495)
chr2 (127-265)||(36561539-36561677)
chr2 (1-173)||(13910319-13910491)
chr2 (1-262)||(6259090-6259351)
chr2 (1-265)||(21520968-21521234)
chr2 (1-265)||(40032333-40032586)
chr2 (70-162)||(36561441-36561532)
chr2 (1-265)||(22407684-22407948)
chr2 (148-257)||(43623968-43624077)
chr2 (18-89)||(36559067-36559138)
chr2 (18-89)||(36561344-36561415)
chr2 (1-98)||(6264420-6264517)
chr2 (1-96)||(22287611-22287706)
chr2 (1-141)||(43623843-43623982)
chr2 (1-166)||(45280260-45280425)
chr2 (18-89)||(45332384-45332456)
chr2 (1-138)||(18800577-18800713)
chr2 (1-62)||(42452702-42452763)
chr2 (1-61)||(22163222-22163282)
chr2 (1-62)||(12342685-12342746)
chr2 (1-62)||(37963202-37963263)
chr2 (1-61)||(19007560-19007620)
chr2 (1-61)||(31733040-31733100)
chr2 (148-257)||(6264546-6264655)
chr2 (1-61)||(17849037-17849097)
chr2 (1-61)||(28196557-28196617)
chr2 (18-60)||(20147040-20147082)
chr2 (1-58)||(3022086-3022143)
chr2 (1-62)||(22874061-22874122)
chr2 (13-90)||(35107191-35107268)
chr2 (18-62)||(5377725-5377769)
chr2 (1-61)||(11578379-11578439)
chr2 (1-61)||(11739835-11739895)
chr2 (1-61)||(14837193-14837253)
chr2 (1-62)||(42923784-42923847)
chr2 (1-60)||(15539750-15539809)
chr2 (25-60)||(20146906-20146941)
chr2 (33-91)||(28462593-28462651)
chr2 (33-62)||(17897549-17897578)
chr2 (33-62)||(23452548-23452577)
chr2 (33-62)||(35215903-35215932)
chr2 (13-62)||(40699229-40699278)
chr2 (33-61)||(20589581-20589609)
chr2 (1-53)||(34979854-34979906)
chr2 (1-61)||(44289343-44289403)
[»] scaffold0140 (4 HSPs)
scaffold0140 (70-265)||(21915-22109)
scaffold0140 (70-265)||(24190-24384)
scaffold0140 (18-89)||(22135-22206)
scaffold0140 (18-89)||(24410-24481)
[»] scaffold0127 (1 HSPs)
scaffold0127 (78-265)||(12868-13054)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-265)||(2629-2893)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-264)||(14768-15032)
[»] scaffold0025 (3 HSPs)
scaffold0025 (1-257)||(69566-69825)
scaffold0025 (1-138)||(73298-73438)
scaffold0025 (148-257)||(73427-73536)
[»] scaffold0068 (2 HSPs)
scaffold0068 (33-174)||(29001-29142)
scaffold0068 (201-265)||(28941-29005)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-98)||(3913-4010)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-62)||(1106-1167)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-62)||(41758-41819)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-62)||(11748-11809)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-62)||(51961-52024)
scaffold0005 (1-62)||(183915-183975)
[»] scaffold0133 (1 HSPs)
scaffold0133 (3-55)||(4773-4825)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-59)||(79140-79198)
[»] scaffold0057 (1 HSPs)
scaffold0057 (3-60)||(16924-16981)
[»] scaffold0511 (1 HSPs)
scaffold0511 (18-62)||(1988-2032)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-61)||(79812-79872)
[»] scaffold0224 (1 HSPs)
scaffold0224 (3-62)||(16095-16154)
[»] scaffold0045 (1 HSPs)
scaffold0045 (14-61)||(85184-85231)


Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 276 - 546
Target Start/End: Complemental strand, 23286134 - 23285864
Alignment:
Q  276 gcaagcatccatatttaaatttacattctaaagcctaaacttgtttgttgtagtaactaatttcttgatgttgtcatgttgcacatttcagaggcacgaa 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||| ||    
T  23286134 gcaagcatccatatttaaatttacattctaaagcctaaacttgtttgttgtagtaactaaatacttgatgttgttatgttgcacatttcagtggcaccaa 23286035  T
Q  376 ggctatatcgtcttgcaccatttcagaaacggcaagtatattctagattgataaaggaagatatgggtctaccgatatttgatttttcaatccttgttaa 475  Q
    || ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  23286034 ggttatatcgtcgtgcaccatttcagaaaaggcaagtatattcgagattgataaaggaagacatggatctaccgatatttgatttttcaatccttgttaa 23285935  T
Q  476 agccactaataacttttctagcagcaataaacttggggaaggtggatttggaccagtgtataaggtaatat 546  Q
    ||||||| ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  23285934 agccacttataacttctctagcacaaataaacttggggaaggtggatttggaccagtgtataaggtaatat 23285864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 295 - 546
Target Start/End: Original strand, 23392453 - 23392704
Alignment:
Q  295 tttacattctaaagcctaaacttgtttgttgtagtaactaatttcttgatgttgtcatgttgcacatttcagaggcacgaaggctatatcgtcttgcacc 394  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||    
T  23392453 tttacattcaaaagcctaaacttgtttgttgtagtaatgaatttcttgatgttgtcatgttgcacatttcagtggcaccaaggttatatcgtcgtgcacc 23392552  T
Q  395 atttcagaaacggcaagtatattctagattgataaaggaagatatgggtctaccgatatttgatttttcaatccttgttaaagccactaataacttttct 494  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23392553 atttcagaaacggcaagtatattctagattaataaaggaagacatggatctaccgatatttgctttttcaatccttgttaaagccactaataacttttct 23392652  T
Q  495 agcagcaataaacttggggaaggtggatttggaccagtgtataaggtaatat 546  Q
    ||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  23392653 agcacaagtaaacttggggaaggtggatttggaccagtgtataaggtaatat 23392704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 64 - 265
Target Start/End: Complemental strand, 18812868 - 18812668
Alignment:
Q  64 ctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatt 163  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18812868 ctgctcaaaatctgtaacaaatctgcacccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatt 18812770  T
Q  164 tttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctca 263  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  18812769 tttccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattcttcagaaacctgattttaagttaactctca 18812670  T
Q  264 ca 265  Q
    ||    
T  18812669 ca 18812668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 64 - 265
Target Start/End: Complemental strand, 18810683 - 18810483
Alignment:
Q  64 ctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatt 163  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||    
T  18810683 ctgctcaaaatctgtaacaaatctgcacccaaaaa-tgtgttttatttttatccgccagcgcaccatcgtgccacgatgtgaccccatcgtgccgcaatt 18810585  T
Q  164 tttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctca 263  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18810584 tttccagtgccttgcctaaaaaaataaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctca 18810485  T
Q  264 ca 265  Q
    ||    
T  18810484 ca 18810483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 78 - 265
Target Start/End: Complemental strand, 43079533 - 43079347
Alignment:
Q  78 taacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttg 177  Q
    |||||||||||| |||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43079533 taacaaatctgctcccaaaga-tacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtaccacgatttttccagtgccttg 43079435  T
Q  178 cccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43079434 cccaaaaaactaaaacctccatcgtgccacgttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 43079347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 78 - 265
Target Start/End: Complemental strand, 43081908 - 43081722
Alignment:
Q  78 taacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttg 177  Q
    |||||||||||| |||||| | || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43081908 taacaaatctgctcccaaaga-tacgttttatttttatccgccagcgtaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttg 43081810  T
Q  178 cccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43081809 cccaaaaaactaaaacctccatcgtgccactttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 43081722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 27827046 - 27826782
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||   ||||||||| || ||||||||||||| |||||| |    
T  27827046 tgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaa-t 27826948  T
Q  101 atgtttta-tttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    |||||||  |||||  | ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||   ||||| | ||||||||||    
T  27826947 atgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcttcaaaaaatgaaacctccat 27826848  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||  ||||||||||||| |||||| | |||||||||||||||| |||||||    
T  27826847 cgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcctgattttaagttaactctcaca 27826782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 27829357 - 27829093
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||   ||||||||| || ||||||||||||| |||||| |    
T  27829357 tgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaa-t 27829259  T
Q  101 atgtttta-tttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    |||||||  |||||  | ||||||||||||||||||||||||| || ||||||||||||||||||||||||||  |||||  ||||| | ||||||||||    
T  27829258 atgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgttttgcctcaaaaaatgaaacctccat 27829159  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||  ||||||||||||| |||||| | |||||||||||||||| |||||||    
T  27829158 cgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcctgattttaagttaactctcaca 27829093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 14807811 - 14807556
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| |  |||||    
T  14807811 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc--aaaat 14807714  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | |||||  | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||  |||  | |||||||| |    
T  14807713 acgtttatgtttttcgctgccagcgcaccaccgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaa 14807615  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 257  Q
    ||||| ||||||||||| || || |||||||||||||||||||||||||||||||||||    
T  14807614 tcgtgtcacgttgcccaaccatcatgccacgattctgcagaaacctgattttaagttaa 14807556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 44720903 - 44720617
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtc----------------------ctgcttaaaatctgt 78  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||                      |||||||||||||||    
T  44720903 tgtttcagccccctctatctcaaagtttgctttgatataaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgt 44720804  T
Q  79 aacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 178  Q
    |||||||||||||||||||| |||||||   ||||  | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||     
T  44720803 aacaaatctgcacccaaaaa-tatgtttctgtttttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtaccttg- 44720706  T
Q  179 ccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcag-aaacctgattttaagttaattctcaca 265  Q
    ||  |||||| |||||||| | ||||||||  ||||||||  || |||||||||||||||| ||||||||||||||||||| |||||||    
T  44720705 cctcaaaactgaaacctccaaacgtgccacaatgcccagcaatcatgccacgattctgcagaaaacctgattttaagttaactctcaca 44720617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 12517299 - 12517566
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||||||||||  |||||||||| ||||||||||| ||||| ||||||||||||   ||||||||| || ||||||| ||||| ||||||    
T  12517299 tgtttcagccccctctatctctcaaagtttgctctgatacaaggtatatatatatagtaaaagtatcgcttaaaatttggaacaaatttgcactcaaaaa 12517398  T
Q  99 atatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc 197  Q
     ||||||| | |||||  | |||||| |||||||||||||||||| || ||||||||||||||||||||||||| | ||| ||  |||||| ||||||||    
T  12517399 -tatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtacattg-cctcaaaactgaaacctcc 12517496  T
Q  198 -atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacat 266  Q
     ||||||||||||||||  ||| ||||||||||||| |||||| | |||||||||||||||| ||||||||    
T  12517497 aatcgtgccacgttgccttgccatcgtgccacgattcctgcag-atcctgattttaagttaactctcacat 12517566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 15072770 - 15072506
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||   ||||||||| || ||||||| |||||||| |||||    
T  15072770 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcaccca-aaaat 15072672  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||  | |||||||||||||| ||||||| || || ||||||||| ||||||||||| |||| |||| |   |||||| |||||||| |    
T  15072671 acgtttctgttattcgctgccagcgcaccatcatgccacgttgcgatcccatcgtgacacgatttttctagtggcttg-cttcaaaactgaaacctccaa 15072573  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||| |||||||||||||| ||||| ||||||| |||||| || ||||||||||||||| |||||||    
T  15072572 tcgtgtcacgttgcccagccatcgtgtcacgattcctgcag-aatctgattttaagttaactctcaca 15072506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 15068041 - 15067785
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||| |||||||||||||||   |||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||||||||||| |    
T  15068041 tgtttcagccccttctatctcaaagtttaggttgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaa-t 15067943  T
Q  101 atgttttattt-ttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||||  || ||  | |||||||||||||||||||||| || || ||||||||| || ||||||||||||| |||| |   |||||| |||||||| |    
T  15067942 acgtttttgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcatgatttttccagtggcttg-cttcaaaactgaaacctccaa 15067844  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaa 257  Q
    |||||||| ||||||||||| || |||||||||| ||||| ||| |||||||||||||||    
T  15067843 tcgtgccatgttgcccagccatcttgccacgattcctgca-aaatctgattttaagttaa 15067785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 4424078 - 4423938
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||   ||||||||| || ||||||||||||| | ||||||    
T  4424078 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctgtatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aaaaat 4423980  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgat 141  Q
    |||||| |||||||  | ||||||||||||||||||||||||    
T  4423979 atgtttctatttttcgctgccagcgcaccatcgtgccacgat 4423938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 3886193 - 3886419
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcaccc--aaaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||   ||||||||| || ||||||| |||||||  |||||    
T  3886193 tgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaaaaaa 3886292  T
Q  99 atatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctc 196  Q
    |||||||| | || ||  | |||||| ||||||||| ||||||                     ||||||||||| |||||| ||||||||| |||||||    
T  3886293 atatgtttctgttattcgctgccagcacaccatcgtaccacga---------------------tttttccagtgtcttgcctcaaaaaactgaaacctc 3886371  T
Q  197 catcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacct 244  Q
    ||||||||||||||| |||||| || || |||||||||||||||||||    
T  3886372 catcgtgccacgttgtccagccatcatgtcacgattctgcagaaacct 3886419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28251842 - 28252002
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| |  |||||    
T  28251842 tgtttcaacccactctatctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc--aaaat 28251939  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgat 162  Q
    | |||| | |||||  | |||| ||||||||||| |||||||| || ||||||||||||||||    
T  28251940 acgtttctgtttttcgctgccaacgcaccatcgtaccacgatgcgatcccatcgtgccacgat 28252002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 2468373 - 2468511
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||   |||||| || || |||||||||||| | |||||||    
T  2468373 tgtttcagctccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaacatttggaacaaatctgca-ctaaaaaat 2468471  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacg 139  Q
    | |||| | || ||  |  |||||||||||||||||||||    
T  2468472 acgtttctgttattcgcatccagcgcaccatcgtgccacg 2468511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 458 - 548
Target Start/End: Complemental strand, 23342115 - 23342025
Alignment:
Q  458 tttttcaatccttgttaaagccactaataacttttctagcagcaataaacttggggaaggtggatttggaccagtgtataaggtaatattg 548  Q
    |||| ||||| |||||||||| ||   ||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  23342115 ttttccaatcattgttaaagcaaccggtaatttttctagcagaaataaacttggggaaggtggatttggaccagtttataaggtaatattg 23342025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 458 - 548
Target Start/End: Original strand, 23385019 - 23385109
Alignment:
Q  458 tttttcaatccttgttaaagccactaataacttttctagcagcaataaacttggggaaggtggatttggaccagtgtataaggtaatattg 548  Q
    |||| ||||| |||||||||| |||  ||| ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  23385019 ttttccaatcattgttaaagcaactggtaatttttctagcagaaataaacttggggaaggtggatttggaccggtttataaggtaatattg 23385109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 28251988 - 28252118
Alignment:
Q  127 ccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgc 225  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| ||| ||  |||  | |||||||| ||||| |||||||||| |||| ||||||    
T  28251988 ccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtaccacgttgcctagccatcgtgc 28252086  T
Q  226 cacgatt-ctgcagaaacctgattttaagttaa 257  Q
    ||||||| |||||| | ||||||||||||||||    
T  28252087 cacgattcctgcag-atcctgattttaagttaa 28252118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 43079614 - 43079558
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43079614 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 43079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 43081986 - 43081930
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43081986 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 43081930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18810768 - 18810707
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  18810768 tgtttcagccccctctatctccaagtttgctctgatacaagatctatatttatagtaaaagt 18810707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 148 - 266
Target Start/End: Complemental strand, 4423952 - 4423834
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctg 245  Q
    |||||||||||||||||||||||||||||| ||  |||||| |||||||| || |||||||||||||||||  | ||||||||||| |||||| | | ||    
T  4423952 ccatcgtgccacgatttttccagtgccttg-ccttaaaactgaaacctccaattgtgccacgttgcccagcaattgtgccacgattcctgcag-atcttg 4423855  T
Q  246 attttaagttaattctcacat 266  Q
    |||||||||||| ||||||||    
T  4423854 attttaagttaactctcacat 4423834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 181597 - 181536
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||||    
T  181597 tgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagt 181536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18812953 - 18812892
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  18812953 tgtttcagcctcctctatctccaagtttgctctgatacaagatctatatttatagtaaaagt 18812892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26775261 - 26775200
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||||    
T  26775261 tgtttcagccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagt 26775200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43530188 - 43530123
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||||    
T  43530188 tgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 43530123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13858759 - 13858820
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||||||||||||||| |||| || |||||||| |||||||||||||||||||||    
T  13858759 tgtttcatccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 13858820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14419466 - 14419527
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| |  |||||||| |||||||||||||||||||||    
T  14419466 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagt 14419527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14477336 - 14477276
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||| ||||||||||||||| ||||||| |||||||| | ||||||||||||||||||    
T  14477336 tgtttcaaccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaag 14477276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33541663 - 33541723
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  33541663 tgtttcagccccctctatctcaatgtttacactgatacaatgtctatatttatagtaaaag 33541723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35872653 - 35872713
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  35872653 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 35872713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 22684953 - 22685112
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcacccaaaaaatatgttttatt 110  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||||  | |  | |||| ||| ||||||||| ||    ||||||| ||||||||    
T  22684953 ctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttca--ataaaaatacgttttatt 22685050  T
Q  111 tttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||||||  | | |||||||||||| ||||||  ||  | |||||| ||| ||||||||||||    
T  22685051 tttatcttcaatcgcaccatcgtggcacgattcgattcgatcgtggcacaatttttccagtg 22685112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 31162267 - 31162212
Alignment:
Q  7 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| |||||| |||| || ||||||||||||||||||||||||||||||    
T  31162267 agccccctctttctcaaggtttactatgatacaaggtctatatttatagtaaaagt 31162212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1225226 - 1225165
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| |  |||||||| | |||||||||||||||||||    
T  1225226 tgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagtaaaagt 1225165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27911075 - 27911014
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| | ||||||||| ||| |||||||| ||||||||    
T  27911075 tgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagt 27911014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27957494 - 27957433
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| | ||||||||| ||| |||||||| ||||||||    
T  27957494 tgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagt 27957433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41382733 - 41382672
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| |||||| |||||||||| |||| || |||| |||||||||||||||||||||||||    
T  41382733 tgttttagccccatctatctcaaggtttactctgattcaaggtctatatttatagtaaaagt 41382672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41384804 - 41384744
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| ||||||||||  ||| ||||||| |||||||||||||||||||||||||    
T  41384804 tgtttcagcccc-tctatctcaatttttactttgattcaaggtctatatttatagtaaaagt 41384744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21482382 - 21482322
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||| || |||||||||||||||| || ||||||||  |||||||||||||||||||    
T  21482382 tgtttcagtccactctatctcaaagtttactctgatacaaattctatatttatagtaaaag 21482322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25952581 - 25952521
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| |  |||||||||||||||||    
T  25952581 tgtttcagccccctctatctcaaggtttcctctgatacaaagcttatatttatagtaaaag 25952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27107172 - 27107232
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| ||||    |||||||| ||||||||||||||||||||    
T  27107172 tgtttcagccccctctatctcaaggtttatactgatacaatgtctatatttatagtaaaag 27107232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5623013 - 5623073
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| ||||  | ||||||||   ||||||||||||||||||    
T  5623013 tgtttcagccccctctatctcaaggtttattctgatacaaaacctatatttatagtaaaag 5623073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 6376032 - 6375988
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||| |||| || ||||||||||||||||||||||||||||||    
T  6376032 tctcaatgtttactctgatacaaggtctatatttatagtaaaagt 6375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32339369 - 32339304
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  32339369 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 32339304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36865598 - 36865538
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctt-tgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||||||||||| || |||| | | |||||||| |||||||||||||||||||    
T  36865598 tgtttcagccccctctatcttaaggtttacatctgatacaatgtctatatttatagtaaaa 36865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15185985 - 15186046
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||| | ||| |||||||| |||| || |||||||| || ||||||||||||||||||    
T  15185985 tgtttcagtcacctttatctcaaggtttactctgatacaaagtttatatttatagtaaaagt 15186046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 15809243 - 15809214
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  15809243 tgatacaaggtctatatttatagtaaaagt 15809214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 17847556 - 17847527
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  17847556 tgatacaaggtctatatttatagtaaaagt 17847527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 24873494 - 24873523
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  24873494 tgatacaaggtctatatttatagtaaaagt 24873523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 28283532 - 28283561
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  28283532 tgatacaaggtctatatttatagtaaaagt 28283561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30480778 - 30480838
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||| |||| |||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  30480778 tgtttcaaccccttctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 30480838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 9174421 - 9174684
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |    
T  9174421 tgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaaactgtaacaaatctgcacccaaaaa-t 9174519  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    |||||| | |||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||    
T  9174520 atgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcctaataaactaaaacctccat 9174619  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  9174620 cgtgctacgttgcctagccgtcgtgccacgattctgcag-aacctgattttaagttaactctcaca 9174684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 75 - 265
Target Start/End: Original strand, 16932171 - 16932360
Alignment:
Q  75 ctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
    ||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16932171 ctgtaacaaatctgctcccaaaaa-tacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 16932269  T
Q  175 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16932270 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 16932360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 75 - 270
Target Start/End: Original strand, 16934525 - 16934719
Alignment:
Q  75 ctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
    ||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16934525 ctgtaacaaatctgctcccaaaaa-tacgttttatttttatccgacagcgcaccatcgtgccaggatgagaccccatcgtgccacgatttttccagtgcc 16934623  T
Q  175 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacatttat 270  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16934624 ttgcccaaaaaactaaaacctccatcgtgccatgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcacatttat 16934719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 33 - 265
Target Start/End: Original strand, 11006548 - 11006781
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatccgccagcgcaccatc 131  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| | |||||  | ||||||||||||||    
T  11006548 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcacccaaaaa-tatgtttctgttttttgctgccagcgcaccatc 11006646  T
Q  132 gtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgat 231  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||  ||||||||||||    
T  11006647 gtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaattgaaacctccatcgtgccacgttgcccagcgatcgtgccacgat 11006746  T
Q  232 tctgca-gaaacctgattttaagttaattctcaca 265  Q
    ||||||  ||||||||||||||||||| |||||||    
T  11006747 tctgcataaaacctgattttaagttaactctcaca 11006781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 75 - 267
Target Start/End: Original strand, 22783128 - 22783319
Alignment:
Q  75 ctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22783128 ctgtaacaaatctgctcccaaaaa-tacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgcc 22783226  T
Q  175 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacatt 267  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||    
T  22783227 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtaccacgattctgcagaaacctgattttaagttaactctcacatt 22783319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 9176749 - 9177035
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct------------- 87  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||                 
T  9176749 tgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaatgtcttgcttaaaaactgtaacaaatctgctttaaatttat 9176848  T
Q  88 ---------gcacccaaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttg 177  Q
             ||||||||||| ||||||| | |||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9176849 aacaaatctgcacccaaaaa-tatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttg 9176947  T
Q  178 cccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    || ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9176948 cctaaaaaactaaaacctccatcgtgccacgttgcctaaccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 9177035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 75 - 265
Target Start/End: Original strand, 22780763 - 22780952
Alignment:
Q  75 ctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  22780763 ctgtaacaaatctgctcccaaaaa-tacgttttatttttatccgccagcgcaccatcgtgccacaatgagaccccatcgtgccatgatttttccagtgcc 22780861  T
Q  175 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||    
T  22780862 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtaccacgattctgcagaaacctgattttaagttaactctcaca 22780952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 51015304 - 51015042
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||   ||||||||| || |||||||||||||  ||||| |    
T  51015304 tgtttcagccccctctatctccaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactgaaaaa-t 51015206  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    |||||| | || ||  | ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  51015205 atgtttctgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctaaaaaactgaaacctccat 51015106  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctca 263  Q
    ||||||||||||||  ||| || ||||||||||||||||||| ||||||||||||||| |||||    
T  51015105 cgtgccacgttgccttgccatcatgccacgattctgcagaaatctgattttaagttaactctca 51015042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 24888854 - 24888598
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||| | ||||||    
T  24888854 tgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcactc-aaaaat 24888756  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    |||||| | |||||  | |||||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||  |||  | |||||||| |    
T  24888755 atgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaa 24888657  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 257  Q
    ||||||||||||||| |||| ||||||||| |||||||||||| |||||||||||||||    
T  24888656 tcgtgccacgttgcctagccatcgtgccacaattctgcagaaatctgattttaagttaa 24888598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 37089646 - 37089906
Alignment:
Q  1 tgtttcagccccctctatctca---aagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaa 97  Q
    |||||||||||||||||||||    ||||||    ||||||||||||||||||||||||||||||  |||||||||| || |||||||||||||| ||||    
T  37089646 tgtttcagccccctctatctctctcaagtttagcctgatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcacctaaaa 37089745  T
Q  98 aatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctc 196  Q
    | || |||| | || ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || ||||||||||||| ||    
T  37089746 a-tacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcctcacctaaaaaactaaaacatc 37089844  T
Q  197 -catcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 257  Q
     |||||||||||||||||  ||| |||||||||||||||||||||| |||||||||||||||    
T  37089845 tcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaa 37089906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 5637740 - 5638006
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaa 96  Q
    |||||||||||||||||||||    |||||||||| | ||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||||||    
T  5637740 tgtttcagccccctctatctctctcaaagtttgctcttatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 5637839  T
Q  97 aaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacct 195  Q
    |  || |||| | |||||  | |||||| ||||||| |||||||||| || ||||||||| || ||||||||||||||||||||  |||| || ||||||    
T  5637840 a--tacgtttctgtttttcgctgccagctcaccatcatgccacgatgcgatcccatcgtgacatgatttttccagtgccttgcctcaaaa-ctgaaacct 5637936  T
Q  196 ccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| |||||||    
T  5637937 ccatcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctcaca 5638006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 36919860 - 36920125
Alignment:
Q  1 tgtttcagccccctctatct--caaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||| |||||  |||||||| || ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||||||||    
T  36919860 tgtttcagccccctatatctatcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaa 36919959  T
Q  99 atatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc 197  Q
     || |||| || | ||  | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||  |||| | ||||||||    
T  36919960 -tacgtttctactattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgacttg-cctcaaaattgaaacctcc 36920057  T
Q  198 -atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
     ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| |||||||    
T  36920058 aatcgtgccacgttgcccagccatcgtgccacgattttgcag-aacctgattttaagttaactctcaca 36920125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 22803009 - 22803270
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| ||||| |     
T  22803009 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaatac 22803108  T
Q  101 atgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-at 199  Q
     | |||| || ||  | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||  |||||| |||||||| ||    
T  22803109 gt-ttttgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgagccacgatttttccagtgcctt-tcctcaaaactgaaacctccaat 22803206  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctca 263  Q
    ||||||||||||||||||| |||| ||||||||||  |||||  |||||||||||||| |||||    
T  22803207 cgtgccacgttgcccagccatcgtaccacgattctatagaaatttgattttaagttaactctca 22803270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 38409240 - 38408993
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatc 116  Q
    |||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| | |||||||||||| | |||||  |    
T  38409240 tctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aaaaatatgtttctgtttttcgc 38409142  T
Q  117 cgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgccca 215  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||  |||  | |||||||| ||||||||||| ||||||    
T  38409141 cgccaacgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatcgtgccacgatgccca 38409043  T
Q  216 gccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||  |||||||||||||||||||||| || |||||||||||| |||||||    
T  38409042 gcaatcgtgccacgattctgcagaaatctaattttaagttaactctcaca 38408993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 22044665 - 22044930
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||   ||||||||| || ||||||||||||  | ||||||    
T  22044665 tgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgca--ctaaaaat 22044762  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc--ccaaaaaactaaaacctcc 197  Q
    |||||| | |||||  | |||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||  | |||||| | ||||||||    
T  22044763 atgtttctgtttttccctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaaaaatgaaacctcc 22044862  T
Q  198 atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||  |  ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  22044863 atcgtgccacgttgcccttcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 22044930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 31849874 - 31850138
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||  |||||||| |||||||||  |||||||| ||||||||||   ||||||||| || ||||||||||||| |||||| |    
T  31849874 tgtttcagccccctctatctcctagtttgctctgatacaagacctatatttctagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaa-t 31849972  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    |||||| | |||||  | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  |||||| |||||||| |    
T  31849973 atgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccaagatttttccagtgccttgccc-caaaactgaaacctccaa 31850071  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||  ||||||||| ||| |||||| | | |||||||||||||| |||||||    
T  31850072 tcgtgccacgttgcccagcaatcgtgccacaattcctgcag-atcttgattttaagttaactctcaca 31850138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 33 - 265
Target Start/End: Original strand, 3824880 - 3825112
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatccgccagcgcaccatc 131  Q
    ||||||||||||||||||||||||||||||  |||||||||| || |||||||||||||||||||| || |||| | || ||   ||||| |||||||||    
T  3824880 tgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaaa-tacgtttctgttattcgtcgccaacgcaccatc 3824978  T
Q  132 gtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga 230  Q
    ||||||||||| |||||||| |||||| |||||||||||||| |||||  |||| || ||||||||| |||||||| ||||||||||| ||||| |||||    
T  3824979 gtgccacgatgcgaccccattgtgccatgatttttccagtgctttgcctcaaaa-ctgaaacctccaatcgtgccatgttgcccagccatcgtgtcacga 3825077  T
Q  231 ttctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||||||| |||||||    
T  3825078 ttctgcagaaacctgattttaagttaactctcaca 3825112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 11435013 - 11434769
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| |||||| |    
T  11435013 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcactcaaaaa-t 11434915  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctcca 198  Q
    |||||| | |||||  | ||||||||||||                     |||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  11434914 atgtttctgtttttcgctgccagcgcacca---------------------tcgtgccacgatttttccagtgtcttgcctcaaaaaactgaaacctcca 11434836  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||    
T  11434835 tcgtgccacgttgcccagccatcgtaccacgattctgcagaaacctgattttaagttaactctcaca 11434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 5198478 - 5198300
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| | ||||||    
T  5198478 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aaaaat 5198380  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc 179  Q
    |||||| | |||||  | ||||||||||||||||||||||||| || |||||||||||||||||||||||| || |||||    
T  5198379 atgtttctgtttttcgctgccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagagctttgcc 5198300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 48486377 - 48486113
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||| |||||    
T  48486377 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccca-aaaat 48486279  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||  | ||||||||||||| |||||||  || ||||||||||||||||||    ||||||| |||| ||  |||||| |||||||| |    
T  48486278 acgtttctgttattcgctgccagcgcaccattgtgccacattgtgaccccatcgtgccacgaaaaatccagtgacttg-cctcaaaactgaaacctccaa 48486180  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||| ||||| ||||||||||| ||||||||  ||||||||||||||||| |||||||    
T  48486179 tcgtgccacgttgctcagccatcgtgccacgatttctgcag-gacctgattttaagttaactctcaca 48486113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 267
Target Start/End: Original strand, 36921787 - 36922035
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatc 116  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||   ||||||||| || |||||||||||| ||||||| || |||| | || ||  |    
T  36921787 tctcaaagtttactctgatacaaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaa-tacgtttctgttattcgc 36921885  T
Q  117 cgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgccca 215  Q
     ||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||| |||| ||  |||||| |||||||| ||||||||| ||||||||    
T  36921886 tgccaatgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgacttg-cctcaaaactgaaacctccaatcgtgccatgttgccca 36921984  T
Q  216 gccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacatt 267  Q
    ||| |||| |||||||| ||||| |||||||||||||||||| |||||||||    
T  36921985 gccatcgtaccacgattttgcag-aacctgattttaagttaactctcacatt 36922035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 18847211 - 18846923
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct------------- 87  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||                 
T  18847211 tgtttcaaccccctctatctcaaagtttgttttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgctttaaatttgt 18847112  T
Q  88 ---------gcacccaaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttg 177  Q
             ||||||||||| ||||||| | |||||  |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||    
T  18847111 aacaaatctgcacccaaaaa-tatgtttctgtttttccccgcgagcgcaccatcgtgccacgatgcgaccccatcgtaccacgatttttccagtaccttg 18847013  T
Q  178 cccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacgattctgcag--aaacctgattttaagttaattctcaca 265  Q
     ||  |||||| |||||||| ||||||||||| | |||| |  |||||||||||||||||||  ||| ||||||||||||||| |||||||    
T  18847012 -cctcaaaactgaaacctccaatcgtgccacgattcccaacaatcgtgccacgattctgcagaaaaatctgattttaagttaactctcaca 18846923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 7941251 - 7941133
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 246  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7941251 ccatcgtgccaccatttttccagtgccttgcctcaaaaaactgaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctga 7941152  T
Q  247 ttttaagttaattctcaca 265  Q
    ||||||||||| |||||||    
T  7941151 ttttaagttaactctcaca 7941133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 16934422 - 16934506
Alignment:
Q  5 tcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16934422 tcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 16934506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 22046960 - 22047135
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| |||||||||  ||||||||| |||||||||||||||||||   ||||||||| || ||||||||||||  | ||||||    
T  22046960 tgtttcagccccctctatctccaagtttgctccgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgca--ctaaaaat 22047057  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 178  Q
    |||||| | |||||  | |||||| |||||||||||||||||| || |||||||||||| |||||||||||||||||||    
T  22047058 atgtttctgtttttccctgccagcacaccatcgtgccacgatgcgatcccatcgtgcca-gatttttccagtgccttgc 22047135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 11008930 - 11009075
Alignment:
Q  64 ctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgat 162  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | |||||  | ||||| ||||||||||||||||||| |||||||||||||||||||    
T  11008930 ctgcttaaaatctgtaacaaatctgcacccaaaaa-tatgtttctgttttttgctgccagtgcaccatcgtgccacgatgcgaccccatcgtgccacgat 11009028  T
Q  163 ttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccacg 208  Q
    |||||||||||||||||  |||||| | |||||||||| ||||||||    
T  11009029 ttttccagtgccttgcctaaaaaaattgaaacctccattgtgccacg 11009075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 16932068 - 16932152
Alignment:
Q  5 tcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16932068 tcagccccctctatctcaaagtttgctttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 16932152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 619722 - 619882
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   | ||||||| || || ||||||  |||| ||||||    
T  619722 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaaaaaatctctaccc-aaaaat 619820  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacga 161  Q
    |||||| | || ||  ||||||||||||||| |||||||| || ||||||||||||||||||    
T  619821 atgtttctgttattcgccgccagcgcaccattgtgccacgttgcgaccccatcgtgccacga 619882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 40091690 - 40091952
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||   ||||||||| || ||||||| |||| |  ||||||    
T  40091690 tgtttcagccccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgca-ctgaaaaat 40091788  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | ||||   || ||  | | ||| ||||||||||| |||| || ||||||||| || ||||||||||||| || |||  |   |||||| ||| |||| |    
T  40091789 acgtttacgttattcgctgtcagtgcaccatcgtgtcacgttgcgaccccatcatggcacgatttttccaatggctt-acttcaaaactgaaatctccaa 40091887  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctca 263  Q
    |||||||||||| |||| ||  ||||||||||||  ||||| |||||||||||||||||| |||||    
T  40091888 tcgtgccacgttacccaaccaccgtgccacgattattgcag-aacctgattttaagttaactctca 40091952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 47274785 - 47274688
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||||    
T  47274785 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgcacccaaaaa 47274688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 22801137 - 22801233
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaa 97  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| |||||    
T  22801137 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgcactcaaaa 22801233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 265
Target Start/End: Complemental strand, 9148308 - 9148054
Alignment:
Q  4 ttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaata 101  Q
    ||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||   ||||||||| || |||||||||||||||  ||||||    
T  9148308 ttcagccccctctatctctcaaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccc--aaaata 9148211  T
Q  102 tgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atc 200  Q
     ||||   | ||||  ||       ||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||  |||  | |||||||| |||    
T  9148210 cgttt--ctgttatttgc-----tgccatcgtgccacgatgcaaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatc 9148119  T
Q  201 gtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    | |||||||||||||||  |||| |||||||| ||| || | | |||||||||||||| |||||||    
T  9148118 gcgccacgttgcccagcaatcgtaccacgattcctgaag-atcttgattttaagttaactctcaca 9148054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 52942721 - 52942881
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgata--caaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||| |||||||||||||||  | |||||  ||||||||||||||||||| |||||  | |||||||| || |||||||||||| |||||||    
T  52942721 tgtttcagcccc-tctatctcaaagtttagtctgatatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgca-ccaaaaa 52942818  T
Q  99 atatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacg 160  Q
    |||||||| | || ||  | ||||||||| |||||||||||| || |||||||||||||||||    
T  52942819 atatgtttatgttattcgctgccagcgcatcatcgtgccacgttgtgaccccatcgtgccacg 52942881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 24880502 - 24880299
Alignment:
Q  8 gccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt- 106  Q
    |||||||||||||| |||||| ||  |||||||||||||||||||||||||||||   ||||||||| || |||||||||||| || ||||||| ||||     
T  24880502 gccccctctatctccaagtttactccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatcc-aaaaatacgtttc 24880404  T
Q  107 tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgcc 205  Q
    | || ||  | |||||||||||||||||||||| ||  | ||||||||||| |||    ||||||| |||| ||  |||||| ||||||||| |||||||    
T  24880403 tgttattcgctgccagcgcaccatcgtgccacgttgcaatcccatcgtgccgcgaaaaatccagtgacttg-cctcaaaactgaaacctccattcgtgcc 24880305  T
Q  206 acgttg 211  Q
    ||||||    
T  24880304 acgttg 24880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44600113 - 44600174
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44600113 tgtttcagccccctctatctcaaagtttgctttaatacaaggtctatatttatagtaaaagt 44600174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 24879046 - 24878950
Alignment:
Q  2 gtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||||||||| |||||| ||  |||||||||||||||||||||||||||||   ||||||||| || ||||||| ||||||||||||    
T  24879046 gtttcagccccctctatctccaagtttactcggatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaaaa 24878950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 22780687 - 22780744
Alignment:
Q  32 ttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22780687 ttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 22780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 22783052 - 22783109
Alignment:
Q  32 ttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22783052 ttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 22783109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 47868457 - 47868288
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||| |||||  | |  | |||| ||| ||||||||| ||    ||||||    
T  47868457 tttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttca--ataaaaat 47868360  T
Q  101 atgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    | ||||||||||||||  | | ||||| |||||| |||||| ||| || |||||| ||||||||||||||||    
T  47868359 acgttttatttttatcttcaatcgcactatcgtggcacgattagatccaatcgtggcacgatttttccagtg 47868288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6764897 - 6764836
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  6764897 tgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 6764836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40637132 - 40637071
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  40637132 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtgaaagt 40637071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7941379 - 7941280
Alignment:
Q  1 tgtttcagccccctctatctcaaa--gtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||||||||||     ||||||| |||||||| |||||||||||||||||||||   ||||||||| || ||||||||||||||||||||    
T  7941379 tgtttcagccccctctatctctcccggtttgctctgatacaacgtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa 7941280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 22801262 - 22801356
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaac 242  Q
    |||||||||||||||||||||||| |||||||  |||| || ||||||||| ||||| ||||||||||| || |||||||||||||||| ||||||    
T  22801262 ccatcgtgccacgatttttccagttccttgcctcaaaa-ctgaaacctccaatcgtgtcacgttgcccaaccatcgtgccacgattctgtagaaac 22801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 8756527 - 8756616
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacc 92  Q
    |||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||||   | ||| ||| || ||||||||||||||    
T  8756527 tttcagccccttctatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatcgtttataatttggaacaaatctgcacc 8756616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17662509 - 17662574
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||||| ||||||||||||||||||||||||||||||    
T  17662509 tgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 17662574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 257
Target Start/End: Original strand, 52942869 - 52942999
Alignment:
Q  127 ccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgc 225  Q
    ||||||||||||| || ||||||||||||||||||  | | ||||| ||||||  |||  || ||||||||| ||||||||||||||||| || ||||||    
T  52942869 ccatcgtgccacgttgtgaccccatcgtgccacgaaatattcagtgacttgcctcaaag-ctgaaacctccaatcgtgccacgttgcccaaccatcgtgc 52942967  T
Q  226 cacga-ttctgcagaaacctgattttaagttaa 257  Q
    ||||| || |||| |||||||||||||||||||    
T  52942968 cacgatttttgca-aaacctgattttaagttaa 52942999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 18537748 - 18537806
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| |||| || ||||||||| |||||||||||||||||||    
T  18537748 tttcagccccctctatctcaatgtttactctgatacaagatctatatttatagtaaaag 18537806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8631694 - 8631759
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    ||||||||||||||||||| ||||||||||||||| |||||    
T  8631694 tgtttcagccccctctatctctctcaaagtttgctttgatacaaagtctatatttatagtgaaagt 8631759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14787706 - 14787769
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||  |||||||  | ||||||||||||||||||||||||||||||    
T  14787706 tgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaagt 14787769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19095940 - 19095880
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  19095940 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 19095880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24446854 - 24446914
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  24446854 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 24446914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37313341 - 37313400
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| |||||||||||   |||||||||||||||||    
T  37313341 tgtttcagccccctctatctcaaggtttactttgatacaaaacctatatttatagtaaaa 37313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2485147 - 2485209
Alignment:
Q  1 tgtttcagccccct-ctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  2485147 tgttttagcccccttctagctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 2485209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5101055 - 5100994
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||| |||||||||||||| |||| |  |||| |||||||||||||||||||||||||    
T  5101055 tgtttcagtcccctctatctcaaggtttaccctgattcaaggtctatatttatagtaaaagt 5100994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14633377 - 14633317
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||  ||||||||||||||| || |||||||||||||||||||||||| |||||    
T  14633377 tgtttcagccct-tctatctcaaagtttactctgatacaaggtctatatttatagtgaaagt 14633317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 25357683 - 25357634
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  25357683 ctctctctcaaggtttactttgatacaaggtctatatttatagtaaaagt 25357634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36378350 - 36378289
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||||| ||||  | |||||||| |||||||||||||||||||||    
T  36378350 tgtttcagccccgtctatctcaaggtttattctgatacaaagtctatatttatagtaaaagt 36378289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12396120 - 12396180
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||| |||||||||| |||| | || |||||| ||||||||||||||||||||    
T  12396120 tgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaag 12396180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12401082 - 12401142
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||| |||||||||| |||| | || |||||| ||||||||||||||||||||    
T  12401082 tgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaag 12401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 22048491 - 22048575
Alignment:
Q  181 aaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||| |||||||||||||||||||||||||  |  |||||||||||||||   | | | |||||||||||||| |||||||    
T  22048491 aaaaaactgaaacctccatcgtgccacgttgcccttcaatcgtgccacgattcttgcggatcttgattttaagttaactctcaca 22048575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24348276 - 24348211
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||   |||||||||||||||||||||||||||||||    
T  24348276 tgtttcagccccctctatctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagt 24348211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38928453 - 38928513
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || | |||||| | ||||||||||||||||||    
T  38928453 tgtttcagccccctctatctcaaggtttactctaatacaaagcctatatttatagtaaaag 38928513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41997550 - 41997494
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagta 57  Q
    |||||||||||||| |||||||| |||| || |||||||| ||||||||||||||||    
T  41997550 tgtttcagccccctttatctcaaggtttactctgatacaaagtctatatttatagta 41997494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 16186118 - 16186173
Alignment:
Q  7 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| |||||| |||| || ||||||||||| ||||||||||||||||||    
T  16186118 agccccctctctctcaaggtttactctgatacaaggtttatatttatagtaaaagt 16186173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33415762 - 33415821
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| || |||||||| | |||||||| ||||||||    
T  33415762 tgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttgtagtaaaa 33415821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 56030502 - 56030443
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||| |||||||||| |||| || |||||||| | |||||||||||||||||    
T  56030502 tgtttcagccccttctatctcaaggtttactctgatacaaagcctatatttatagtaaaa 56030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19322755 - 19322701
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    ||||||| ||||||||||||||| |||| || ||||||||| |||||||||||||    
T  19322755 tgtttcatccccctctatctcaaggtttactctgatacaagatctatatttatag 19322701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15032811 - 15032872
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| |||||||| |||| || || ||| | |||||||||||||||||||||    
T  15032811 tgtttcagccccctttatctcaaggtttactctggtaccaagtctatatttatagtaaaagt 15032872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16453367 - 16453306
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||   ||||||| |||||||| | |||||||||||| ||||||    
T  16453367 tgtttcagccccctctatctctcggtttgctctgatacaaagcctatatttatagcaaaagt 16453306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 22134917 - 22134966
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||   |||||||||||||||||||||||||||||||    
T  22134917 ctctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagt 22134966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3937484 - 3937543
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||| ||||||||||||| |||| || ||||| || ||||||||||||||||||||    
T  3937484 tgtttcagctccctctatctcaaggtttactctgata-aaagtctatatttatagtaaaag 3937543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 12102140 - 12102088
Alignment:
Q  9 ccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||| ||||  | ||||||||| |||||||||||||||||||    
T  12102140 ccccctctatctcaaggttttatctgatacaagatctatatttatagtaaaag 12102088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38270261 - 38270321
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| | |||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  38270261 tgtttcagcctcttctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 38270321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 11008877 - 11008907
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtc 63  Q
    |||||||||||||||||||||||||||||||    
T  11008877 tgatacaaggtctatatttatagtaaaagtc 11008907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 18535106 - 18535164
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| |||| || |||  | |||||||||||||| |||||||    
T  18535106 tttcagccccctctatctcaaggtttactctgaatcgaggtctatatttattgtaaaag 18535164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2891375 - 2891314
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgat-acaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||| || |||| |  |||| |||| ||||||||||||||||||||    
T  2891375 tgtttcagccccctctatcttaaggtttacactgattacaatgtctatatttatagtaaaag 2891314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 6132928 - 6132871
Alignment:
Q  4 ttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||| |||||||||||| |||| |   ||||||| ||||||||||||||||||||    
T  6132928 ttcagcctcctctatctcaatgtttacaccgatacaatgtctatatttatagtaaaag 6132871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 8528963 - 8528918
Alignment:
Q  220 tcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||| ||||||||| |||||| ||||||||||||||| |||||||    
T  8528963 tcgtgacacgattctccagaaatctgattttaagttaactctcaca 8528918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 16689303 - 16689380
Alignment:
Q  95 aaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||||||| |||||  |||||||| | | ||||||||||||||||| || ||   ||||||| ||||||||||||||||    
T  16689303 aaaaatacgtttttattttatcctcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 16689380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 22132706 - 22132735
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  22132706 tgatacaaggtctatatttatagtaaaagt 22132735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 47211053 - 47211082
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  47211053 tgatacaaggtctatatttatagtaaaagt 47211082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 53405153 - 53405124
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  53405153 tgatacaaggtctatatttatagtaaaagt 53405124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 4556422 - 4556494
Alignment:
Q  96 aaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 168  Q
    |||||| ||||||||||||||  | | ||||||||||||||||| || ||   ||||||| ||||||||||||    
T  4556422 aaaatacgttttatttttatcttcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttcc 4556494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 47868240 - 47868192
Alignment:
Q  220 tcgtgccacgattctgcagaaacctgattttaagttaattctcacattt 268  Q
    ||||| ||||||||| |||||  ||||||||||||||| ||||||||||    
T  47868240 tcgtggcacgattctccagaattctgattttaagttaactctcacattt 47868192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 52043737 - 52043765
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  52043737 tgatacaaggtctatatttatagtaaaag 52043765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 4e-95; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 16226171 - 16225895
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat--------------- 85  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||                   
T  16226171 tgttttagacccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctacttaaaatctgt 16226072  T
Q  86 -------ctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 178  Q
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16226071 aacaaatctgcacccaaaa--tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 16225974  T
Q  179 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16225973 ccaaaaaactaaaacctccatcgtgccacgttgcccaaccgtcgtgccacgattctgcagaaacctgattttaagttaa 16225895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 47179717 - 47179428
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaa------------- 83  Q
    |||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
T  47179717 tgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctacttaaaat 47179618  T
Q  84 ---------atctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
             |||||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47179617 ctgtaacaaatctgctcccaaaaa-tacgttttatttttatccgcaagcgcaccatcgtgccacgatgagaccccatcgtgccacgattttttcagtgcc 47179519  T
Q  175 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47179518 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 47179428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 51752369 - 51752104
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||||||| |    
T  51752369 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa-t 51752271  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctcca 198  Q
    | |||| | || ||  ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  51752270 acgtttatgttattcgccgccagcgcaccatcgtgccacgatgcggccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcca 51752171  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||    
T  51752170 tcgtgccacgttgcccaaccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 51752104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 47177366 - 47177078
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaa------------- 83  Q
    |||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
T  47177366 tgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctacttaaaat 47177267  T
Q  84 ---------atctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
             |||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  47177266 ctgtaacaaatctgctcccaaaaa-taggttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgtc 47177168  T
Q  175 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  47177167 ttgccca-aaaactaaaacctccatcgtgccacgttgcccagtcgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 47177078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 51750043 - 51749778
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||||||| |    
T  51750043 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa-t 51749945  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctcca 198  Q
    | |||| | || ||  |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  51749944 acgtttctgttattcgccgccagcgcactatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcca 51749845  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||| |||||||||||| || ||||||||||||||||||||||| |||||||||||||| |||||||    
T  51749844 tcgtaccacgttgcccaaccatcgtgccacgattctgcagaaacttgattttaagttaactctcaca 51749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 13761841 - 13761577
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||||||| |    
T  13761841 tgtttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa-t 13761743  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    | |||| | || ||  |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  13761742 acgtttctgttattcgccgccagcacaccatcgtgccgcgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccat 13761643  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  13761642 catgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 13761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 20302463 - 20302198
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    |||||||| || ||||||| |||||||||||| |    
T  20302463 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttataataaaagtttcacttaaaatttggaacaaatatgcacccaaaaa-t 20302365  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctcca 198  Q
    |||||| | || ||  ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  20302364 atgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaaaaaactgaaacctcca 20302265  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||  ||| || |||| |||||||||||||| ||||||||||||||| |||||||    
T  20302264 tcgtgccacgttgccttgccatcatgccgcgattctgcagaaatctgattttaagttaactctcaca 20302198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 6823889 - 6823643
Alignment:
Q  1 tgtttcagccccc-tctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaa 99  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||   ||||||||| || ||||||||||||||||||||     
T  6823889 tgtttcagcccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa- 6823791  T
Q  100 tatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctcc 197  Q
    || |||| | || ||  ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  6823790 tacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcatgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc 6823691  T
Q  198 atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctg 245  Q
    |||||||||||||||||| || |||||||| ||||||||| |||||||    
T  6823690 atcgtgccacgttgcccaaccatcgtgccatgattctgcaaaaacctg 6823643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 10400105 - 10400369
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||   ||||||||| || ||||||||||||||| ||||||    
T  10400105 tgtttcagccccctctatctcccagtttgctctgatacaaggtctatatttatagaaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaaat 10400203  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||  | ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||  |||  | |||||||| |    
T  10400204 acgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatatttccagtgctttg-cctcaaacttgaaacctccaa 10400302  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| |||||||    
T  10400303 tcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctcaca 10400369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 15823550 - 15823285
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||   ||||||||| || |||||||||||| || ||||||    
T  15823550 tgtttcagccccctttatctctaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatcc-aaaaat 15823452  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    |||||| | || ||  | || |||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||| ||  |||  | |||||||| |    
T  15823451 atgtttctgttatttgctgctagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttctagtgctttg-cctcaaacttgaaacctccaa 15823353  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacat 266  Q
    |||||||||||||||||||| ||||||||||||| |||||| | |||||||||||||||| ||||||||    
T  15823352 tcgtgccacgttgcccagccatcgtgccacgattcctgcag-atcctgattttaagttaactctcacat 15823285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 6823019 - 6822775
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||   ||||||||| || |||||||||||||||| |||||    
T  6823019 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgcaccca-aaaat 6822921  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctcca 198  Q
    |  ||| |||| ||  ||||||||||||||                     ||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  6822920 acatttctattattcgccgccagcgcacca---------------------tcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcca 6822842  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  6822841 tcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 6822775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 127 - 265
Target Start/End: Complemental strand, 23783376 - 23783238
Alignment:
Q  127 ccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgcc 226  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||    
T  23783376 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgcc 23783277  T
Q  227 acgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  23783276 acgattgtgcagaaacctgattttaagttaactctcaca 23783238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 16231605 - 16231368
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtc----------------------ctgcttaaaatctgt 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      |||||||||||||||    
T  16231605 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgt 16231506  T
Q  79 aacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 178  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||                     |||||||||||||||||||||| |||||    
T  16231505 aacaaatctgcacccaaaaa-tatgttttatttttatccgccagcgcacca---------------------tcgtgccacgatttttccagtgtcttgc 16231428  T
Q  179 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcag 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16231427 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcag 16231368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 28840665 - 28840426
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatc 116  Q
    |||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| | |||||||||||| | |||||  |    
T  28840665 tctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aaaaatatgtttctgtttttcgc 28840567  T
Q  117 cgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgccca 215  Q
     |||||| |||||||||||||||||| || ||||||||||||| ||||||||||| ||||| || ||||||| |||||||| ||||||||||||||||      
T  28840566 tgccagcacaccatcgtgccacgatgcgatcccatcgtgccacaatttttccagtaccttg-cctaaaaactgaaacctccaatcgtgccacgttgcctt 28840468  T
Q  216 gccgtcgtgccacgatt-ctgcagaaacctgattttaagttaa 257  Q
    ||| ||||||||||||| |||||| | ||||||||||||||||    
T  28840467 gccatcgtgccacgattcctgcag-atcctgattttaagttaa 28840426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 28842499 - 28842241
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||   ||||||||| || ||||||| ||||| ||||||    
T  28842499 tgtttcagccccctctatctctcaaagtttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactcaaaaa 28842400  T
Q  99 atatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc 197  Q
     ||||||| | |||||  | |||||  |||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||||| ||||||||    
T  28842399 -tatgtttctgtttttcgctgccaggacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttg-cctaaaaactgaaacctcc 28842302  T
Q  198 -atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaa 257  Q
     |||||||||||| |||  ||| ||||||||||||| || ||| | ||||||||||||||||    
T  28842301 aatcgtgccacgtagccttgccatcgtgccacgattcctacag-atcctgattttaagttaa 28842241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 28207343 - 28207500
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||||||||     
T  28207343 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaaa- 28207441  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgcca 158  Q
    | |||| | || ||  |||||||||||||||||||||||| || |||||||||||||||    
T  28207442 acgtttatgttattcgccgccagcgcaccatcgtgccacgttgtgaccccatcgtgcca 28207500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 39462523 - 39462257
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||  |||||||||||||||| || |||||||||||||||||||||||| |||||  | |||||||| || ||||||||||||||||||||||    
T  39462523 tgtttcagccttctctatctcaaagtttactctgatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgcacccaaaaaat 39462424  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctc-ca 198  Q
    | |||| | || ||  | || ||||||||||||||||||  ||  | |||||||||||||||    |||| || |||| ||  |||||| |||||||  |    
T  39462423 acgtttctgttattcactgcaagcgcaccatcgtgccacattgcaatcccatcgtgccacgaaaaatccactgacttg-cctcaaaactgaaacctctaa 39462325  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcacat 266  Q
    ||||||||||||||||| || | ||| ||||| |||||||| |||||||||||||||||| ||||||||    
T  39462324 tcgtgccacgttgcccaaccattgtgtcacgatttctgcag-aacctgattttaagttaactctcacat 39462257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 13215085 - 13214854
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||| |||||    
T  13215085 tgtttcagccccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccca-aaaat 13214987  T
Q  101 atg-ttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | | |||| || ||  | |||| | ||||||||||||||| ||  | |||||| ||||||||    ||||||| |||| ||  |||||| |||||||| |    
T  13214986 acgtttttgttatttgctgccaacacaccatcgtgccacgttgcaatcccatcatgccacgaaaaatccagtgacttg-cctcaaaactgaaacctccaa 13214888  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt 232  Q
    ||||||||||||||||| || |||||||||||||    
T  13214887 tcgtgccacgttgcccaaccatcgtgccacgatt 13214854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 178
Target Start/End: Original strand, 30790673 - 30790848
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatat 102  Q
    ||||||| ||||||||||||| |||| || |||||||| |||||||||||||||||||||   ||||||||| || |||||||||||||  ||||| ||     
T  30790673 tttcagctccctctatctcaaggtttactctgatacaatgtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactgaaaaa-tac 30790771  T
Q  103 gttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 178  Q
    |||| | |||||  || ||||||||||||||||||||  || || |||||||||||||| ||||||||||| |||||    
T  30790772 gtttatgtttttcccctccagcgcaccatcgtgccacattgcgatcccatcgtgccacgttttttccagtgacttgc 30790848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 20291386 - 20291279
Alignment:
Q  160 gatttttccagtgccttgcc-caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaat 258  Q
    ||||||||||||||| |||| ||||||||| ||||||||| ||||||||||||||  ||| |||||||||||||||||||||| |||||||||||||||     
T  20291386 gatttttccagtgccatgcctcaaaaaactgaaacctccaccgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaac 20291287  T
Q  259 tctcacat 266  Q
    ||||||||    
T  20291286 tctcacat 20291279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 41646922 - 41646764
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatat 102  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||| || ||||||||    
T  41646922 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatcc-aaaaatat 41646824  T
Q  103 gttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacga 161  Q
    |||| | || ||  | ||||| |||||||||||||||| ||  | |||| ||||||||||    
T  41646823 gtttctgttattcgctgccagtgcaccatcgtgccacgttgcaatcccaccgtgccacga 41646764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38925755 - 38925852
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || || |||||||||||||||||    
T  38925755 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaataaatctgcacccaaaaa 38925852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 23783533 - 23783467
Alignment:
Q  23 aagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23783533 aagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 23783467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 47451652 - 47451511
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||   |||||| || || |||||||||||| |||||||||    
T  47451652 tgtttaagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaatatttggaacaaatctgca-ccaaaaaat 47451554  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatg 142  Q
    | |||| | || ||  | | |||||||||||||||||||||||    
T  47451553 acgtttctgttattcgctgtcagcgcaccatcgtgccacgatg 47451511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 23783452 - 23783382
Alignment:
Q  71 aaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatg 142  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23783452 aaatctgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatg 23783382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 14098247 - 14098343
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||  | |||||||| || ||| ||||||||||||||||    
T  14098247 tgtttcagtcccctctatctcaaagtttagtttgatacaaggtctatatttatagtgaaagtattacttaaaatttggaac-aatctgcacccaaaaa 14098343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 257
Target Start/End: Original strand, 3579903 - 3580151
Alignment:
Q  9 ccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-t 107  Q
    |||||||||||||||| ||| |  |||||||||||||||||||| |||||||||   ||||||||| || ||||||| ||||| |  |||||| |||| |    
T  3579903 ccccctctatctcaaattttacgctgatacaaggtctatatttaaagtaaaagtatcgcttaaaatttggaacaaatttgcactc-taaaatacgtttat 3580001  T
Q  108 atttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgcca 206  Q
      | ||  |||||||||||||||||||||||| ||  | |||| ||| |||||||||||||| || |||| ||  | |||| |||| ||| || ||| ||    
T  3580002 gatattcgccgccagcgcaccatcgtgccacgttgcaatcccaccgtaccacgatttttccaatgacttg-cctcataactgaaacatccaattgtgtca 3580100  T
Q  207 cgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaa 257  Q
    |||||||| ||  ||||||||||||| |||||  ||||||||||||||||||    
T  3580101 cgttgccctgcaatcgtgccacgattcctgca-taacctgattttaagttaa 3580151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 2617520 - 2617382
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||  |   | |||| ||| ||||||||| ||    ||||||    
T  2617520 tgtttcagcctcctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagatcccttaaaaaactgaaacaaatcttca--ataaaaat 2617423  T
Q  101 atgttttatttttatccgccagcgcaccatcgtgccacgat 141  Q
    | ||||||||||||||  | | |||||||||||| ||||||    
T  2617422 acgttttatttttatcttcaatcgcaccatcgtggcacgat 2617382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 49495476 - 49495537
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||    
T  49495476 tgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 49495537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25251552 - 25251611
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||    
T  25251552 tgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaa 25251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18800846 - 18800907
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||    
T  18800846 tgtttcagccccttgtatctcaaggtttactctgatacaaggtctatatttatagtaaaagt 18800907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20291461 - 20291400
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| | |||||||||||||| |||||| | ||||||||||||||||||||||||||||    
T  20291461 tgtttcatctccctctatctcaaaatttgctctaatacaaggtctatatttatagtaaaagt 20291400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 24325648 - 24325599
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  24325648 ctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 24325599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28998530 - 28998591
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| ||||||||||||||||| || |||| ||| |||||||||||||||||||||    
T  28998530 tgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaagt 28998591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29004246 - 29004307
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| ||||||||||||||||| || |||| ||| |||||||||||||||||||||    
T  29004246 tgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaagt 29004307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11457752 - 11457812
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  11457752 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 11457812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14183863 - 14183923
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||| ||||||||||| |||| || ||||||| |||||||||||||||||||||    
T  14183863 tgtttcagccctctctatctcaaggtttactctgatacatggtctatatttatagtaaaag 14183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 13449857 - 13449996
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgctt--aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccat 130  Q
    |||||||||||||||||||||||| |||||  | | |  |||| ||| ||||||||| ||    ||||||| ||||||||||||||  ||| ||||||||    
T  13449857 tgatacaaggtctatatttatagtgaaagttatcccttaaaaaactgaaacaaatcttcaat--aaaaatacgttttatttttatctaccatcgcaccat 13449954  T
Q  131 cgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    |||| ||||||  || || |||||| ||||||||||||||||    
T  13449955 cgtggcacgattcgatccaatcgtggcacgatttttccagtg 13449996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 15295137 - 15295183
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||    
T  15295137 ctctctctcaaagtttgctctgatacaaggtctatatttatagtaaa 15295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 17186407 - 17186465
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| ||||||| ||||||||  |||||||||||| ||||||    
T  17186407 tttcagccccctctatctcaaggtttgctctgatacaaaatctatatttatattaaaag 17186465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 38925915 - 38925996
Alignment:
Q  183 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctca 263  Q
    |||||| ||||||||| |||||||||||||||||||| |||| |||||| |||||| | |||||||||||||||||| |||||    
T  38925915 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgatttctgc-ggaacctgattttaagttaactctca 38925996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 47451488 - 47451405
Alignment:
Q  183 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||| ||||||||| ||||||||| |||||||||| ||||||||||| ||||||| ||| ||||||| ||||||| |||||||    
T  47451488 aaaactgaaacctccaatcgtgccacattgcccagccatcgtgccacgatttctgca-aaatctgatttgaagttaactctcaca 47451405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50079098 - 50079158
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  50079098 tgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 50079158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50248849 - 50248909
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||| ||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  50248849 tgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 50248909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17318897 - 17318838
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| || ||||||||   |||||||||||||||||    
T  17318897 tgtttcagccccctctatctcaaggtttactatgatacaaaacctatatttatagtaaaa 17318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18307113 - 18307054
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| |  |||||||| |||||||||||||| ||||    
T  18307113 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaa 18307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25248791 - 25248850
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| || |||||||| |||||||||| ||| ||||    
T  25248791 tgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttctagaaaaa 25248850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 265
Target Start/End: Original strand, 14098441 - 14098510
Alignment:
Q  196 ccatcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||| ||| ||||| ||||||||||| |||||||| || ||||||||||||||| |||||||    
T  14098441 ccatcgtgccacggtgctcagccatcgtgccacgatttctgcag-aatctgattttaagttaactctcaca 14098510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6995977 - 6996038
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||| ||||||||||||||||  ||| || |||| ||||||||||||||||| |||||||    
T  6995977 tgtttcggccccctctatctcaagatttactctgattcaaggtctatatttataataaaagt 6996038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21948464 - 21948526
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||    |||||||  | |||||||||||||||||||||||||||    
T  21948464 tgtttcagccccctctatctctctcaaagtttagtatgatacaaggtctatatttatagtaaa 21948526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31423151 - 31423212
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| |  |||||||| |  ||||||||||||||||||    
T  31423151 tgtttcagccccctctatctcaaggtttacactgatacaatgcttatatttatagtaaaagt 31423212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39932077 - 39932017
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||  |||||||  | | |||||||||||||||||||||||||    
T  39932077 tgtttcagccccctctatctctcaaagttttgtctcatacaaggtctatatttatagtaaa 39932017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 48665167 - 48665114
Alignment:
Q  9 ccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| || |||| || |||| |||||||||||||||||||||||||    
T  48665167 ccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagt 48665114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2510601 - 2510666
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  2510601 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 2510666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 16431096 - 16431044
Alignment:
Q  10 cccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| ||||||| ||||||||   |||||||||||||||||||    
T  16431096 cccctctatctcaaggtttgctctgatacaaaacctatatttatagtaaaagt 16431044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18839591 - 18839531
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||  |||| |  | |||||| ||||||||||||||||||||    
T  18839591 tgtttcagccccctctatctcatggtttacaataatacaatgtctatatttatagtaaaag 18839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31489919 - 31489859
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||| ||||||||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  31489919 tgtttcaaccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 31489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 49687384 - 49687301
Alignment:
Q  183 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||| ||||||||| | |||||||||||||||||| || |||||||| |||| ||  |||||||||||||||||| |||||||    
T  49687384 aaaactgaaacctccaattgtgccacgttgcccagccatcatgccacgatttctaca-taacctgattttaagttaactctcaca 49687301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50076949 - 50077009
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||  |||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  50076949 tgtttcagccctttctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 50077009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8347546 - 8347661
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgc-tttgatacaaggtctatatttatagtaaaagt--cctgcttaaaatctgtaacaaatctgcaccca-aa 96  Q
    ||||||| ||||||||||||||| |||| | | ||||||||||||||| ||||||||||||||  ||  | |||||| || |||||||||| ||||| ||    
T  8347546 tgtttcaaccccctctatctcaaggtttacatctgatacaaggtctat-tttatagtaaaagtacccctcataaaat-tggaacaaatctg-acccataa 8347642  T
Q  97 aaatatgttttatttttat 115  Q
    ||||| |||||||||||||    
T  8347643 aaatacgttttatttttat 8347661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 42922236 - 42922177
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| |||||||||||| || |||| || ||||||||  ||||||||||||||||||||    
T  42922236 tttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagt 42922177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9241362 - 9241424
Alignment:
Q  1 tgtttcagcccc-ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||| || |||| || |||||||| | |||||||||||||||||||    
T  9241362 tgtttcagcccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagt 9241424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 26520403 - 26520449
Alignment:
Q  9 ccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    ||||||||||||||| |||| || |||||||| ||||||||||||||    
T  26520403 ccccctctatctcaaggtttactctgatacaaagtctatatttatag 26520449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 50307826 - 50307884
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| | |||||||| |||| ||||||||||| |  |||||||||||||||||    
T  50307826 tttcagccccatatatctcaaggtttactttgatacaaagcttatatttatagtaaaag 50307884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2949508 - 2949569
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| ||  ||| |||  ||||||||||| ||||||||    
T  2949508 tgtttcagccccctctatctcaaggttttctcggattcaatatctatatttattgtaaaagt 2949569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 9459732 - 9459761
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  9459732 tgatacaaggtctatatttatagtaaaagt 9459761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 9463559 - 9463588
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  9463559 tgatacaaggtctatatttatagtaaaagt 9463588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 12302819 - 12302848
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  12302819 tgatacaaggtctatatttatagtaaaagt 12302848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16428657 - 16428596
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||| |  ||||||| ||||| ||   |||||||||||||||||||    
T  16428657 tgtttcagccccctctatctaatggtttgctctgatataaaacctatatttatagtaaaagt 16428596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 26613517 - 26613577
Alignment:
Q  3 tttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||  || ||||  | ||||||||||||||||||||||| |||||    
T  26613517 tttcagccccctctatctctcaaggtttcatctgatacaaggtctatatttatagcaaaag 26613577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 31735834 - 31735863
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  31735834 tgatacaaggtctatatttatagtaaaagt 31735863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 43104131 - 43104102
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  43104131 tgatacaaggtctatatttatagtaaaagt 43104102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 46432037 - 46432066
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  46432037 tgatacaaggtctatatttatagtaaaagt 46432066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 47906236 - 47906207
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  47906236 tgatacaaggtctatatttatagtaaaagt 47906207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 49687496 - 49687447
Alignment:
Q  49 tttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||||||   ||||||||| || ||||||||||||||||||||    
T  49687496 tttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaa 49687447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8349325 - 8349385
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgc-tttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||| ||||||||||| |||||| | | ||||||| |||||||||||| |||||    
T  8349325 tgtttcagccctctctatctcaaggtttgcatctaatacaagatctatatttataataaaa 8349385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 15669669 - 15669729
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctt-tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||| ||| |||| | | || |||||||||| ||||||||||||||||    
T  15669669 tttcagccccctctatcccaatgtttacatctgctacaaggtctgtatttatagtaaaagt 15669729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17324069 - 17324009
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||| ||||| ||||||||||| |||| || | |||||| ||||||||||||| ||||||    
T  17324069 tgttttagccctctctatctcaaggtttactctaatacaaagtctatatttataataaaag 17324009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 172; Significance: 4e-92; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 6212 - 5927
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaa----------------------atctgt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      || |||    
T  6212 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaaactgtaacaaatctgctttaaatttgt 6113  T
Q  79 aacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc 178  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  6112 aacaaatctgcacccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccatgatgagaccccatcatgccacgatttttccagtgccttgc 6014  T
Q  179 ccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    | ||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  6013 ctaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 5927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 1e-91; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 75 - 265
Target Start/End: Original strand, 1047314 - 1047503
Alignment:
Q  75 ctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
    ||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1047314 ctgtaacaaatctgctcccaaaaa-tacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 1047412  T
Q  175 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1047413 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 1047503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 70 - 265
Target Start/End: Original strand, 9027493 - 9027687
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9027493 aaaaactgtaacaaatctgctcccaaaa-atatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 9027591  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  9027592 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 9027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 2935264 - 2935070
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2935264 aaaaactgtaacaaatctgctctcaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 2935166  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  2935165 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 2935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 22137072 - 22136878
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22137072 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 22136974  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  22136973 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 22136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 40552099 - 40551905
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40552099 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 40552001  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  40552000 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 40551905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 22108061 - 22107867
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22108061 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 22107963  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||| ||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  22107962 gtgccttgcccaaaaaactaaaacctgcatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 22107867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 40549821 - 40549627
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40549821 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 40549723  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||| ||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  40549722 gtgccttgcccaaaaaactaaaacctgcatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 40549627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 27306504 - 27306768
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||||||| |    
T  27306504 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaa-t 27306602  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||  | || |||||||||||||||||||| | |||||||||||||||||||||||||| || |||| ||  |||||| |||||||| |    
T  27306603 acgtttctgttattcgctgctagcgcaccatcgtgccacgaagcgaccccatcgtgccacgatttttccaatgacttg-cctcaaaactgaaacctccaa 27306701  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacat 266  Q
    ||||||||||||| |||||| ||||||||||||| |||| |||||| |||||||||||| ||||||||    
T  27306702 tcgtgccacgttgtccagccatcgtgccacgattttgca-aaaccttattttaagttaactctcacat 27306768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 25542544 - 25542280
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || || |||||| ||| ||||||||    
T  25542544 tgtttcagcccc-tctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctacactcaaaaaat 25542446  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    |||||| | |||||  | ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| ||  |||||| |||||||| |    
T  25542445 atgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttcaagtgccttg-ccttaaaactgaaacctccaa 25542347  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacat 266  Q
    |||||||||||||||||||  |||||||||  | |||||| | | |||||||||||||| ||||||||    
T  25542346 tcgtgccacgttgcccagcaatcgtgccacattcctgcag-atcttgattttaagttaactctcacat 25542280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 3878591 - 3878322
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatt----tatagtaaaagtcctgcttaaaatctgtaacaaatctgcaccca 94  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||||||    ||||||||||||   ||||||||| || ||||||||||||||||    
T  3878591 tgtttcagccccctctatctctcaaagtttgctctgatacaaggtctatattaatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccca 3878492  T
Q  95 aaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaac 193  Q
    |||  || |||| | || ||  | ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||  |||   | ||||    
T  3878491 aaa--tacgtttctgttattcgctgccagcgtaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctcaaact-tgaaac 3878395  T
Q  194 ctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||    
T  3878394 ctccaatcgtgccacgttgcccagccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 3878322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 35643 - 35379
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||| |||||    
T  35643 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccca-aaaat 35545  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| |  | ||  | |||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| ||| ||  |||  | |||||||| |    
T  35544 acgtttctgctatttgctgccagcgcacgatcgggccacgatgcgaccccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaa 35446  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||| |||  ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  35445 tcgtgccacgttgcctagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 35379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 44578 - 44314
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| ||  ||||||||||||||| |||||    
T  44578 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggtacaaatctgcaccca-aaaat 44480  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    |||||| | || ||  | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |   |||  | |||||||| |    
T  44479 atgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttttccagtgctttg-cgtcaaacttgaaacctccaa 44381  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||| ||||||||   ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  44380 tcgtgccacattgcccagaaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 44314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 3 - 265
Target Start/End: Original strand, 40837019 - 40837261
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatat 102  Q
    ||||||||||||| ||||| || |||||| ||||||||||||||||||||||||||||||    |||||||| || ||||||||||||| ||||||||||    
T  40837019 tttcagccccctcaatctccaaatttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaaaaatat 40837118  T
Q  103 gttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcg 201  Q
    |||| |||||||  | |||||| |||||                     ||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  40837119 gtttctatttttcgctgccagcacacca---------------------tcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctccatcg 40837197  T
Q  202 tgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||| ||  || |||||||||||||||||||||||||||||||||||||| |||||||    
T  40837198 tgccacgttgtccgaccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 40837261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 18567627 - 18567363
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||| ||||||||||||||| || ||||||||| ||||||||||||||||||||   ||||||||| || ||||| | |||||| |||||||    
T  18567627 tgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaatt-tgcaccaaaaaaat 18567529  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||    |||||||||||||||||||| | || ||||||||||||||||||    ||||||| |||| ||  |||||| |||||||| |    
T  18567528 acgtttctgttattcgttgccagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttg-cctcaaaactgaaacctccaa 18567430  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||| |||||||||  ||||||||||| ||||| || ||||||||||||||| || |||||||    
T  18567429 tcgtgccactttgcccagctatcgtgccacgatttctgtag-aacctgattttaagtcaactctcaca 18567363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 31435322 - 31435586
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||| ||||||||||||||| || ||||||||| ||||||||||||||||||||   ||||||||| || ||| ||| |||||| |||||||    
T  31435322 tgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaac-aatttgcaccaaaaaaat 31435420  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||    |||||||||||||||||||| | || ||||||||||||||||||    ||||||| |||| ||  |||||| |||||||| |    
T  31435421 acgtttctgttattcgttgccagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttg-cctcaaaactgaaacctccaa 31435519  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||| |||||||||  ||||||||||| ||||| || ||||||||||||||| || |||||||    
T  31435520 tcgtgccactttgcccagctatcgtgccacgatttctgtag-aacctgattttaagtcaactctcaca 31435586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 1049570 - 1049710
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||||||| |    
T  1049570 tgtttcagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa-t 1049668  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgat 141  Q
    | |||| | || ||  ||||||||||||| ||||||||||||    
T  1049669 acgtttctgttattcgccgccagcgcaccttcgtgccacgat 1049710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 26804462 - 26804345
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 246  Q
    |||||||||||||||||||||| |||||||||  |||| || ||||||||| |||| ||||||||||||||| |||||||||||||||| ||||||||||    
T  26804462 ccatcgtgccacgatttttccactgccttgcctcaaaa-ctgaaacctccaatcgtaccacgttgcccagccatcgtgccacgattctgtagaaacctga 26804364  T
Q  247 ttttaagttaattctcaca 265  Q
    ||||||||||| |||||||    
T  26804363 ttttaagttaactctcaca 26804345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 22108158 - 22108087
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22108158 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 22108087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 22137169 - 22137098
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22137169 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 22137098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 40549918 - 40549847
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40549918 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 40549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 40552196 - 40552125
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40552196 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 40552125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 22392487 - 22392319
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa-a 99  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||| ||| || |||||||||||||  ||||| |    
T  22392487 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttacaatttggaacaaatctgcactgaaaaata 22392388  T
Q  100 tatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
     || || | |||||  || ||||||||||||||| ||||| || || ||||||||| |||||||| ||||    
T  22392387 cat-ttctgttttttgcctccagcgcaccatcgtaccacgttgcgatcccatcgtggcacgatttctcca 22392319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 9027396 - 9027467
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9027396 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 9027467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 2935349 - 2935279
Alignment:
Q  19 ctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2935349 ctcagagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 2935279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 1047238 - 1047295
Alignment:
Q  32 ttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1047238 ttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 1047295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31156186 - 31156247
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  31156186 tgtttcagccccctctatctcaaagtttgccttgatacaagctctatatttatagtaaaagt 31156247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26804583 - 26804491
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaa 97  Q
    |||||||||||||||||||||||||||| ||     ||||||||||||||||||||||||||   ||||||||| || |||||||||||||||||||    
T  26804583 tgtttcagccccctctatctcaaagtttactc----acaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa 26804491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 1606472 - 1606423
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1606472 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 1606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 151 - 268
Target Start/End: Original strand, 1049699 - 1049816
Alignment:
Q  151 tcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgatt 248  Q
    ||||||||||||||||||||| ||||||   |||| || ||||||||| |||||||||||||||||||  ||||||||||||| |||||| | | |||||    
T  1049699 tcgtgccacgatttttccagtaccttgcttcaaaa-ctgaaacctccaatcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgatt 1049796  T
Q  249 ttaagttaattctcacattt 268  Q
    ||||||||| ||||||||||    
T  1049797 ttaagttaactctcacattt 1049816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7188557 - 7188496
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||    
T  7188557 tgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 7188496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13099751 - 13099812
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  13099751 tgtttcaaccccctctatctcaaggtttactttgattcaaggtctatatttatagtaaaagt 13099812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42331274 - 42331335
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||||    
T  42331274 tgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagt 42331335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 40946342 - 40946167
Alignment:
Q  1 tgtttcagccccctct----atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcaccca 94  Q
    ||||||||||||||||     |||||||||||||| ||| ||||||| |||||||||||| |||||  | |  | |||| ||| ||||||||| ||        
T  40946342 tgtttcagccccctctgtccctctcaaagtttgctatgaaacaaggtttatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttca--at 40946245  T
Q  95 aaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||||||||||||||||||||||  | | |||||||||||| ||||||  || || |||||| ||||||||||||||||    
T  40946244 aaaaatatgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtgacacgatttttccagtg 40946167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22251817 - 22251878
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| ||||||||||||||||| || |||| |||||| ||||||||||||||||||    
T  22251817 tgtttcagcctcctctatctcaaagtttactctgattcaaggtttatatttatagtaaaagt 22251878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21678080 - 21678020
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| | |||||||||  |||||||||||||||||||    
T  21678080 tgtttcagccccctctatctcaaggtttacattgatacaatatctatatttatagtaaaag 21678020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25276155 - 25276095
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||| ||||||||||||||||||||||||| |||||||| |  |||||||||||||||||    
T  25276155 tgttttagccccctctatctcaaagtttgctctgatacaaagcatatatttatagtaaaag 25276095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 20091818 - 20091877
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| |||| || ||||| || |||||||||||||||||||||    
T  20091818 tttcagccccctctatctcaaggtttactctgataaaaagtctatatttatagtaaaagt 20091877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 1849967 - 1849918
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  1849967 ctctctctcaaagtttgctatgaaacaaggtctatatttatagtaaaagt 1849918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 7092471 - 7092512
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  7092471 tctcaaagtttgctctgatacaaggtctatatttatagtaaa 7092512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7094697 - 7094759
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||    |||||||||| |||||||||||||||||||||| ||||    
T  7094697 tgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttataataaa 7094759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22828908 - 22828969
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| ||  ||||||| | |||||||||||||||||||    
T  22828908 tgtttcagccccctctatctcaaggtttactcggatacaaagcctatatttatagtaaaagt 22828969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11355272 - 11355212
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| | ||||||||||||||||||    
T  11355272 tgtttcagccccctctatctcaaggtttacactgatacaaagcctatatttatagtaaaag 11355212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 20137384 - 20137444
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| | | ||||||||||||||||    
T  20137384 tgtttcagccccctctatctcaaggtttactctgatacaaagccaatatttatagtaaaag 20137444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21680041 - 21679981
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  21680041 tgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 21679981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 30906327 - 30906386
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||  ||| || | ||||||||||||||||||||| ||||||    
T  30906327 tttcagccccctctatctcaagatttactcttatacaaggtctatatttatagcaaaagt 30906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 37412403 - 37412462
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||||| |||||| | |||| || |||| |||||||||||||||||||||||    
T  37412403 tgtttcagccccctatatctccaggtttactctgattcaaggtctatatttatagtaaaa 37412462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 443609 - 443548
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| ||| ||||||||||||| |||| || |||| ||| |||||||||||||||||||||    
T  443609 tgttttagctccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaagt 443548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4296210 - 4296271
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatac-aaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||| || ||||||||||||||||||||    
T  4296210 tgtttcagccccctctatctcaaggtttacactgatacaaatgtctatatttatagtaaaag 4296271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7470297 - 7470359
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||    |||||||  | |||||||||||||||||||||||||||    
T  7470297 tgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7470359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7472255 - 7472317
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||    |||||||  | |||||||||||||||||||||||||||    
T  7472255 tgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3035735 - 3035670
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  3035735 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 3035670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11757242 - 11757177
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  11757242 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 11757177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20299472 - 20299407
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  20299472 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 20299407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24465563 - 24465503
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgc-tttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| | | |||||||| |||||||| ||||||||||    
T  24465563 tgtttcagccccctctatctcaaggtttacatctgatacaaagtctatatctatagtaaaa 24465503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24748608 - 24748548
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||  ||||||||| |  |||||||| ||||||||||||| ||||||    
T  24748608 tgtttcagccccctctaagtcaaagtttacactgatacaatgtctatatttataataaaag 24748548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38394000 - 38393935
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  38394000 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 38393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39146262 - 39146322
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||| ||||||| |||| |  |||||||  ||||||||||||||||||||    
T  39146262 tgtttcagccccctccatctcaaggtttacactgatacagtgtctatatttatagtaaaag 39146322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44724593 - 44724533
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||| |||||| | |||| |  |||||||| ||||||||||||||||||||    
T  44724593 tgtttcagccccctatatctccaggtttacactgatacaatgtctatatttatagtaaaag 44724533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3677293 - 3677235
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||| |||||||| |||||| || |||| |||| ||||||||||||||||||    
T  3677293 tgtttcagcccc-tctatctccaagtttactctgattcaagatctatatttatagtaaaa 3677235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21990164 - 21990106
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||| |||||||| | |||| || |||| |||||||||||||||||||||||    
T  21990164 tgtttcagcccc-tctatctccaggtttactctgattcaaggtctatatttatagtaaaa 21990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24258477 - 24258423
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    ||||||||||||||||||||||| |||| || ||||||||   ||||||||||||    
T  24258477 tgtttcagccccctctatctcaatgtttactctgatacaaaacctatatttatag 24258423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 7349586 - 7349615
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  7349586 tgatacaaggtctatatttatagtaaaagt 7349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 18345519 - 18345490
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  18345519 tgatacaaggtctatatttatagtaaaagt 18345490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 28485544 - 28485515
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  28485544 tgatacaaggtctatatttatagtaaaagt 28485515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 38396268 - 38396239
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  38396268 tgatacaaggtctatatttatagtaaaagt 38396239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 43253831 - 43253860
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  43253831 tgatacaaggtctatatttatagtaaaagt 43253860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 9680796 - 9680768
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  9680796 tgatacaaggtctatatttatagtaaaag 9680768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 45366526 - 45366470
Alignment:
Q  35 atacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcac 91  Q
    ||||||||| ||||||||||||||||||    |||||||| || |||||||||||||    
T  45366526 atacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcac 45366470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48457667 - 48457602
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    |||||||||||||||||||||||| |||||    
T  48457667 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtgaaagt 48457602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 6e-91; HSPs: 88)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 64 - 265
Target Start/End: Original strand, 34477432 - 34477632
Alignment:
Q  64 ctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatt 163  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34477432 ctgctcaaaatctgtaacaaatctgcacccaaaa-atatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatt 34477530  T
Q  164 tttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctca 263  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  34477531 tttccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacttgattttaagttaactctca 34477630  T
Q  264 ca 265  Q
    ||    
T  34477631 ca 34477632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 31545084 - 31544798
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct------------- 87  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||                 
T  31545084 tgtttcagccccctttatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatctgt 31544985  T
Q  88 ---------gcacccaaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttg 177  Q
             ||||||||||| ||||||| | |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  31544984 aataaatctgcacccaaaaa-tatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttccagtgccttg 31544886  T
Q  178 cccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||||    
T  31544885 cccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 31544798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 10749699 - 10749505
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10749699 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 10749601  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  10749600 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 10749505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 10757154 - 10756960
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10757154 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 10757056  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  10757055 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgctacgattgtgcagaaacctgattttaagttaactctcaca 10756960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 70 - 265
Target Start/End: Original strand, 15354871 - 15355065
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15354871 aaaaactgtaacaaatctgctcccaaaa-atatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 15354969  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  15354970 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 15355065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 70 - 265
Target Start/End: Original strand, 15357147 - 15357341
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15357147 aaaaactgtaacaaatctgctcccaaaa-atatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 15357245  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  15357246 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 15357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 71 - 265
Target Start/End: Complemental strand, 31542636 - 31542442
Alignment:
Q  71 aaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  31542636 aaatctgtaacaaatctgcacccaaaaa-tatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttcca 31542538  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||| |||||||||||||||||||||||| |||||||    
T  31542537 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtgtcacgattttgcagaaacctgattttaagttaactctcaca 31542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 38882110 - 38881845
Alignment:
Q  1 tgtttcagccccc-tctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaa 99  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||||||||     
T  38882110 tgtttcagcccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa- 38882012  T
Q  100 tatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca 198  Q
    || |||| | || ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  38882011 tacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactaaaacctcca 38881912  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||  ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  38881911 tcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 38881845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 70 - 266
Target Start/End: Complemental strand, 23665028 - 23664833
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  23665028 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttcca 23664930  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacat 266  Q
    ||||||| ||||||||| ||||| |||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  23664929 gtgcctttcccaaaaaaataaaaactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacat 23664833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 70 - 266
Target Start/End: Original strand, 23793559 - 23793754
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  23793559 aaaaactgtaacaaatctgctcccaaaa-atatgttttatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttcca 23793657  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacat 266  Q
    ||||||| ||||||||| ||||| |||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  23793658 gtgcctttcccaaaaaaataaaaactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacat 23793754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 23667303 - 23667109
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  23667303 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttcca 23667205  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||| ||||||||| ||||| |||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  23667204 gtgcctttcccaaaaaaataaaaactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23667109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 4236633 - 4236378
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| |||||  |    
T  4236633 tgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaa--t 4236536  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | |||||  | ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| ||  |||||| |||||||| |    
T  4236535 acgtttctgtttttccctgccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtgccttg-ccttaaaactgaaacctccaa 4236437  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 257  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  4236436 tcgtgccacgttgcccagccatcgtgccacaattctgcagaaatctgattttaagttaa 4236378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 31179760 - 31179897
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31179760 aaaaactgtaacaaatctgctcccaaaaa-tacgttttatttttacccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 31179858  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacg 208  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  31179859 gtgtcttgcccaaaaaactaaaacctccatcgtgccacg 31179897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 64 - 265
Target Start/End: Original strand, 34479793 - 34479972
Alignment:
Q  64 ctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatt 163  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||                     |||||||||||||    
T  34479793 ctgctcaaaatctgtaacaaatctgcacccaaaaa-tatgttttatttttatccgccagcgcacca---------------------tcgtgccacgatt 34479870  T
Q  164 tttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctca 263  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  34479871 tttccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctca 34479970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 16776162 - 16775897
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctata-tttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaa 99  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||   ||||||||| || ||||||||| ||| | |||||    
T  16776162 tgtttcagccccctctatctcaaagtttgctcagatacaaggtctatattttatagtaaaagtatcgcttaaaatttggaacaaatcttcactc-aaaaa 16776064  T
Q  100 tatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc- 197  Q
    ||||||| | |||||    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||  |||  | ||||||||     
T  16776063 tatgtttctgtttttcgatgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttg-cctcaaacttgaaacctcca 16775965  T
Q  198 atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||| |||||||||  ||| ||||||||||||| |||||| | ||||||||||||||||||||||||    
T  16775964 atcgtgtcacgttgccttgccatcgtgccacgattcctgcag-atcctgattttaagttaattctcaca 16775897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 25921748 - 25922002
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||| ||||||    
T  25921748 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccc-aaaaat 25921846  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctcca 198  Q
    | |||| | || ||  | | |||||||||||||||||||                     |||||||||||||||||||| ||||||||| |||||||||    
T  25921847 acgtttctgttattcgctgtcagcgcaccatcgtgccac---------------------gatttttccagtgccttgcctcaaaaaactgaaacctcca 25921925  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacatttatgttgg 275  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  25921926 tcgtgccacgttgtccaaccatcgtgccacgattctgcagaaacctgattttaagttaactctcacatatttgttgg 25922002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 2174923 - 2174680
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||    ||||||||| || ||||||||||||| | ||||||    
T  2174923 tgtttcagccccctctatctccaagtttgctctgatacaaggcctgtatttatagtaaaagcatcgcttaaaatttggaacaaatctgcactc-aaaaat 2174825  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    |||||| | |||||  | ||||| |||||||||||||||                     |||||||||||||||||||| |||||||| ||||||||||    
T  2174824 atgtttctgtttttcgctgccagtgcaccatcgtgccac---------------------gatttttccagtgccttgcctaaaaaactgaaacctccat 2174746  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  2174745 cgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 2174680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 38960487 - 38960604
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgat 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||| ||||||||||||||    
T  38960487 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcaaagcccagccgtcgtgccacgattgtgcagaaacctgat 38960586  T
Q  248 tttaagttaattctcaca 265  Q
    |||||||||| |||||||    
T  38960587 tttaagttaactctcaca 38960604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 33 - 174
Target Start/End: Original strand, 21684768 - 21684909
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatccgccagcgcaccatc 131  Q
    ||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||| ||||||| | |||||  | ||||||||||||||    
T  21684768 tgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaa-tatgtttctgtttttcgctgccagcgcaccatc 21684866  T
Q  132 gtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  21684867 gtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 21684909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 148 - 273
Target Start/End: Complemental strand, 39797966 - 39797841
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgat 247  Q
    ||||||||||| ||||||||| ||||||||||  ||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  39797966 ccatcgtgccatgatttttccggtgccttgcctcaaaaactgaaacctccatcatgccacgttgcccagccatcgtgccacgattatgcagaaacctgat 39797867  T
Q  248 tttaagttaattctcacatttatgtt 273  Q
    |||||||||| ||||||| |||||||    
T  39797866 tttaagttaactctcacagttatgtt 39797841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31542739 - 31542651
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31542739 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 31542651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31179646 - 31179734
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31179646 tgtttcagctccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 31179734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 20507737 - 20508001
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||   |||||||   || ||||||||||| ||| ||||||    
T  20507737 tgtttcagccccctctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaatcttggaacaaatctgctccc-aaaaat 20507835  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    |||||| | || ||  | || |||||||| |||||||| | ||  | |||||||||||||||    |||| || |||| ||  ||||||||||||||| |    
T  20507836 atgtttctgttattcgctgctagcgcaccttcgtgccatgttgcaatcccatcgtgccacgaaaaatccaatgacttg-cctcaaaactaaaacctccaa 20507934  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||| |||||||||| |  ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  20507935 tcgtgctacgttgcccaactatcgtgccacgatttctgcag-aacctgattttaagttaactctcaca 20508001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 21948030 - 21947770
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||| |||||    
T  21948030 tgtttcagcccc-tctatctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccca-aaaat 21947933  T
Q  101 atgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-at 199  Q
    ||||||   | |||| |||   | ||||||||||||||| ||  | ||||||||||||||     ||||||| |||  ||  |||||| |||||||| ||    
T  21947932 atgttt--ctgttattcgctgccacaccatcgtgccacgttgcaatcccatcgtgccacgtaaagtccagtgactt-acctcaaaactgaaacctccaat 21947836  T
Q  200 cgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    |||| ||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  21947835 cgtgtcacgttgcctagccatcgtgccacgatttctgcag-aacctgattttaagttaactctcaca 21947770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 23665125 - 23665054
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23665125 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 23665054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 23793462 - 23793533
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23793462 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 23793533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2818611 - 2818708
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||| ||||    
T  2818611 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccgaaaa 2818708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 15354777 - 15354845
Alignment:
Q  21 caaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15354777 caaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 15354845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 15357053 - 15357121
Alignment:
Q  21 caaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15357053 caaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 15357121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 38960334 - 38960405
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38960334 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 38960405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 10757245 - 10757180
Alignment:
Q  24 agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10757245 agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 10757180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 23667400 - 23667329
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  23667400 tctcaaagtttgctttgatacaaggtctatatttatagttaaagtcatgcttaaaatctataacaaatctgc 23667329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 18186504 - 18186590
Alignment:
Q  183 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacattt 268  Q
    |||||| ||||||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  18186504 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacttgattttaagttaactctcacattt 18186590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 31466253 - 31466350
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||| | |||||||||||||  | ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||||||||    
T  31466253 tgtttcagccccttttatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtgtcgcttaaaatttggaacaaatctgcacccaaaaa 31466350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36402603 - 36402699
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||||||   ||||||||| || ||||||||||||||||||||    
T  36402603 tgtttcagccccctctatctcaacgtttactctgatataaggtctatatttatagtaaaagtatcgcttaaaatttg-aacaaatctgcacccaaaaa 36402699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 659829 - 659713
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctg 245  Q
    ||||||||||||||||||||||||| ||||||    ||||| |||||||| |||||||||||||||| |||| ||||||||||| |||||||| ||||||    
T  659829 ccatcgtgccacgatttttccagtgacttgcc--tcaaactgaaacctccaatcgtgccacgttgcctagccatcgtgccacgatttctgcag-aacctg 659733  T
Q  246 attttaagttaattctcaca 265  Q
    |||||||||||| |||||||    
T  659732 attttaagttaactctcaca 659713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 21684905 - 21684969
Alignment:
Q  201 gtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  21684905 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 21684969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 10749767 - 10749704
Alignment:
Q  25 gtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctg 88  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  10749767 gtttgctttgatacaaggtctatatttatactaaaagtcctgcttaaaatctataacaaatctg 10749704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 12556200 - 12556295
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||| | || |||||||||| || ||||||    
T  12556200 tttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaattttgaaacaaatctgtacacaaaaa 12556295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 39854487 - 39854317
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||  | |  | |||| ||| ||||||||| ||    ||||    
T  39854487 tgtttcagcccc-tctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttca--ataaaa 39854391  T
Q  99 atatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||| ||||||||||||||  | | |||||||||||||||||||| ||  | | |||| ||||||||||||||||    
T  39854390 atacgttttatttttatcttcaatcgcaccatcgtgccacgatgcgattcaaccgtgacacgatttttccagtg 39854317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 4410065 - 4409890
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcaccca 94  Q
    |||||||||||||||||||||    |||||||||| |||||||||||||||||||||||| |||||  | |  | |||| ||| ||||||||| ||        
T  4410065 tgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttca--at 4409968  T
Q  95 aaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||||||| |||||||||||||| |||| |||||||||||| ||||||  || || || ||| ||||||||||||||||    
T  4409967 aaaaatacgttttatttttatctgccatcgcaccatcgtggcacgattcgatccaattgtggcacgatttttccagtg 4409890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 23742057 - 23742129
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc-ttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||||||||    
T  23742057 tctcaaagtttgctttgacacaaggtctatatttatagtaaaagtcctgctttaaaacctataacaaatctgc 23742129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 38960431 - 38960501
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgat 141  Q
    |||| ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  38960431 aaaaactgtaacaaatctgctcccaaaa-atatgttttatttttatccgccaacgcaccatcgtgccacgat 38960501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 6756498 - 6756359
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||| ||||||||||||||||||  | ||||||||| |||||||| |||||||||||    |||||||| || || ||||||||| |||||||||    
T  6756498 tgtttcagctccctctatctcaaagtttaatatgatacaagatctatattaatagtaaaagtataacttaaaatttggaataaatctgca-ccaaaaaat 6756400  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacga 140  Q
    | |||| | || ||  | |||||||||||||||||||||||    
T  6756399 acgtttctgttattcgctgccagcgcaccatcgtgccacga 6756359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 20504369 - 20504452
Alignment:
Q  183 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  20504369 aaaactaaaacctccaatcgtgccacgttgcccagctatcgtgccacgatttctgcag-aacctgattttaagttaactctcaca 20504452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 26097735 - 26097676
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||    
T  26097735 tttcagccccctctatctcaaagtttactctgattcaaggtctatatttatagtaaaagt 26097676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 39798058 - 39797988
Alignment:
Q  35 atacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt 106  Q
    ||||||||||||||||||||||||||||  |||||||||| || |||||||||||||||| |||||||||||    
T  39798058 atacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcaccca-aaaatatgttt 39797988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 36208582 - 36208524
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||    
T  36208582 tttcagccccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaag 36208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 3373332 - 3373377
Alignment:
Q  17 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3373332 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 3373377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10529374 - 10529435
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  10529374 tgtttcaacccactctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 10529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 23742155 - 23742256
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttat-ccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 168  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||| ||||||    ||||| ||||||||||| || || |||||||||||| ||||||    
T  23742155 aaaatctgtaactaatctgctcccaaaaaatttgttttatttttatcccgccaagataccattgtgccacgatgtgatcctatcgtgccacgaattttcc 23742254  T
Q  169 ag 170  Q
    ||    
T  23742255 ag 23742256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20043054 - 20042994
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||    
T  20043054 tgtttcagccccctctatctcaaggtttgctatgatacaaagcctatatttatagtaaaag 20042994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 36402762 - 36402845
Alignment:
Q  183 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||| ||||||||| |||||| | ||||||||||| |||||||  |||||||||||||||| |||||||||||| |||||||    
T  36402762 aaaactgaaacctccaatcgtgctatgttgcccagccatcgtgcctagattctgcagaaacctaattttaagttaactctcaca 36402845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18596651 - 18596590
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||| ||| |||| || |||| |||||||||||||||||||||||||    
T  18596651 tgtttcagccccctctatcccaaggtttactctgattcaaggtctatatttatagtaaaagt 18596590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 31179888 - 31179933
Alignment:
Q  220 tcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  31179888 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 31179933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17072887 - 17072827
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  17072887 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 17072827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20045014 - 20044954
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||| |||||| ||||||| |||||||| | ||||||||||||||||||    
T  20045014 tgtttcagccccctctgtctcaaggtttgctctgatacaaagcctatatttatagtaaaag 20044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25904107 - 25904047
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  25904107 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 25904047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 26098528 - 26098587
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||| | |||| || |||| |||||||||||||||||||||||||    
T  26098528 tttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagt 26098587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 31466379 - 31466496
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctc-catcgtgccacgttgcccagccgtcgtgccacgattc-tgcagaaacctg 245  Q
    ||||||||||| ||||||||||||| ||||||  | || || |||| || ||||||||||||||||||  |  |||||||||||||| |||| |||||||    
T  31466379 ccatcgtgccaagatttttccagtgacttgcctcataa-ctgaaacatctcatcgtgccacgttgcccttcaatcgtgccacgattcctgca-aaacctg 31466476  T
Q  246 attttaagttaattctcaca 265  Q
    |||||||||||| |||||||    
T  31466477 attttaagttaactctcaca 31466496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40221526 - 40221465
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||  ||| |||||||||||||||||||||    
T  40221526 tgtttcagccccctctatctcaaggtttactctgagtcaatgtctatatttatagtaaaagt 40221465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 34530941 - 34531001
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||| ||| ||||||||||| ||||||||    
T  34530941 tgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttacagtaaaag 34531001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6661457 - 6661512
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagt 56  Q
    ||||||| ||| ||||||||||| |||| || ||||||||||||||||||||||||    
T  6661457 tgtttcaaccctctctatctcaaggtttactctgatacaaggtctatatttatagt 6661512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 37706057 - 37706116
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| |||| |  |||||||| |||||||||||||| ||||||    
T  37706057 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaagt 37706116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 659850 - 659929
Alignment:
Q  130 tcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgtt 210  Q
    ||||||||| ||| |||| |||||||||||||||||||||||| ||||||    ||||| |||||||| |||||||||||||    
T  659850 tcgtgccacaatgcgacctcatcgtgccacgatttttccagtgacttgcc--tcaaactgaaacctccaatcgtgccacgtt 659929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 172
Target Start/End: Complemental strand, 6747283 - 6747137
Alignment:
Q  26 tttgctttgatacaaggtctatatttatagtaaaagtcctgctt--aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagc 123  Q
    |||||| |||||||||||||||||||||||| |||||  | | |  |||| ||| ||||||||| ||    ||||||| ||||||||||||||  | | |    
T  6747283 tttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttcaat--aaaaatacgttttatttttatcttcaatc 6747186  T
Q  124 gcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||||||||||| ||||||  || || |||||| ||||| ||||||||||    
T  6747185 gcaccatcgtggcacgattcgatccaatcgtggcacgacttttccagtg 6747137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10474598 - 10474655
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaa 58  Q
    |||||||||||||||||| |||| |||| |  |||||||| |||||||||||||||||    
T  10474598 tgtttcagccccctctatttcaaggtttacactgatacaatgtctatatttatagtaa 10474655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18511487 - 18511547
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||||||||||||  |||||||  | |||||||||||||||||||||| ||||    
T  18511487 tgtttcagccccctctatctctcaaagtttagtctgatacaaggtctatatttatattaaa 18511547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41585981 - 41586042
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| |||||||| |||| || ||||||||   |||||||||||||||||||    
T  41585981 tgtttcagccccctttatctcaaggtttactctgatacaaaacctatatttatagtaaaagt 41586042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 265
Target Start/End: Original strand, 12556358 - 12556441
Alignment:
Q  183 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||| ||||||||| | |||||||||||||||||| |  |||||||| |||||||| ||||||||||||| |||| |||||||    
T  12556358 aaaactgaaacctccaattgtgccacgttgcccagccattatgccacgatttctgcag-aacctgattttaaattaactctcaca 12556441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18469015 - 18468950
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  18469015 tgtttcagccccctctatctctctcaaagtttatcatgatacaaggtctatatttatagtaaaagt 18468950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24126860 - 24126800
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||| |||||||||| |||| |  ||||| || ||||||||||||||||||||    
T  24126860 tgtttcagccccatctatctcaaggtttacactgatataatgtctatatttatagtaaaag 24126800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18509593 - 18509652
Alignment:
Q  1 tgtttcagcccc-ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    |||||||||||| || | |||||||||||  | |||||||||||||||||||||||||||    
T  18509593 tgtttcagcccctctatctctcaaagtttagtctgatacaaggtctatatttatagtaaa 18509652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 2723961 - 2723911
Alignment:
Q  11 ccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  2723961 ccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 2723911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 2818763 - 2818836
Alignment:
Q  183 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagtt 255  Q
    |||||| ||||||||| |||||||| |||||| |||| ||||||||||| |||||||| ||||| ||||||||||    
T  2818763 aaaactgaaacctccaatcgtgccatgttgcctagccatcgtgccacgatttctgcag-aacctaattttaagtt 2818836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 172
Target Start/End: Complemental strand, 6745040 - 6744894
Alignment:
Q  26 tttgctttgatacaaggtctatatttatagtaaaagtcctgctt--aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagc 123  Q
    |||||| |||||||||||||||||||||||| |||||  | | |  |||| ||| ||||||||| |     ||||||| ||||||||||||||  | | |    
T  6745040 tttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttcgat--aaaaatacgttttatttttatcttcaatc 6744943  T
Q  124 gcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||||||||||  ||||||  || || |||||| ||||||||||||||||    
T  6744942 gcaccatcgtagcacgattcgatccaatcgtggcacgatttttccagtg 6744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18466688 - 18466625
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||    
T  18466688 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 18466625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 1240248 - 1240171
Alignment:
Q  95 aaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||||||| ||||||||||||||  | |  ||||||||||| ||||||  || || |||||| ||||||||||||||||    
T  1240248 aaaaatacgttttatttttatcttcaattgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtg 1240171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 2144899 - 2144928
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  2144899 tgatacaaggtctatatttatagtaaaagt 2144928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 10586811 - 10586782
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  10586811 tgatacaaggtctatatttatagtaaaagt 10586782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 15552207 - 15552178
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  15552207 tgatacaaggtctatatttatagtaaaagt 15552178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 25803988 - 25803959
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  25803988 tgatacaaggtctatatttatagtaaaagt 25803959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 27910417 - 27910388
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  27910417 tgatacaaggtctatatttatagtaaaagt 27910388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 27912502 - 27912473
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  27912502 tgatacaaggtctatatttatagtaaaagt 27912473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 1189921 - 1189949
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  1189921 tgatacaaggtctatatttatagtaaaag 1189949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 29748313 - 29748285
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  29748313 tgatacaaggtctatatttatagtaaaag 29748285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31472888 - 31472948
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||| ||||||||||||||||| |||| |  | |||||| ||| ||||||||||||||||    
T  31472888 tgttttagccccctctatctcaaggtttacactaatacaatgtccatatttatagtaaaag 31472948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 42238123 - 42238047
Alignment:
Q  96 aaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    |||||| |||||  |||||||| | | ||||||||||||||||| || ||   ||||||| ||||||||||||||||    
T  42238123 aaaatacgtttttgttttatcctcaatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 42238047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 4e-89; HSPs: 105)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 75 - 265
Target Start/End: Complemental strand, 38210256 - 38210067
Alignment:
Q  75 ctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
    ||||||||||||||| |||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38210256 ctgtaacaaatctgctcccaaaaa-tacgttttatttttatccgccagcgcactatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 38210158  T
Q  175 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38210157 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 38210067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 7 - 265
Target Start/End: Original strand, 53896475 - 53896754
Alignment:
Q  7 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaa----------------------a 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||                      |    
T  53896475 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgcttaaaatctgtaacaaa 53896574  T
Q  85 tctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaa 184  Q
    ||||| |||||||| || ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  53896575 tctgctcccaaaaa-tacgttttatttttatccgcaagagcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtaccttgcccaaaa 53896673  T
Q  185 aactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  53896674 aactaaaacctccatcgtgccacgttgcccagcaatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 53896754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 6063719 - 6064006
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagtc----------------------ctgcttaaaatct 76  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||                      |||||||||||||    
T  6063719 tgtttcagccccctctatctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaatct 6063818  T
Q  77 gtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcctt 176  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  6063819 gtaacaaatctgcacccaaaa-atatgttttatttttatccgccagtccaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgcctt 6063917  T
Q  177 gcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||| |||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  6063918 gcccaaaaaactaaaacctccattgtgccacgttgccttgccatcgtgccacgattctgcataaacctgattttaagttaattctcaca 6064006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 75 - 266
Target Start/End: Complemental strand, 50493865 - 50493675
Alignment:
Q  75 ctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  50493865 ctgtaacaaatctgctcccaaaaa-tacgttttatttttatccgccagcgcaccatcgtgccacgatgagactccatcgtgccacgatttttccagtgcc 50493767  T
Q  175 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacat 266  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||    
T  50493766 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtgccacgattctgcagaaacctgattttaagttaactctcacat 50493675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 22114578 - 22114842
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||||||| |    
T  22114578 tgtttcagccccttctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa-t 22114676  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    | |||| | || ||  |||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||  ||||||| ||||||||||    
T  22114677 acgtttctgttattcgccgccatcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaaaaactgaaacctccat 22114776  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||||||||||||| |||||||    
T  22114777 cgtgccacgttgcccaaccatcgtgccacgattctacagaaacctgattttaagttaactctcaca 22114842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 18099443 - 18099707
Alignment:
Q  1 tgtttcagccccctctatctca-aagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaa 99  Q
    |||||||||||||||||||||  |||||| || |||||||||||||||||| ||||||||||||  ||||||||| || ||||||||||||||||||||     
T  18099443 tgtttcagccccctctatctctcaagtttactctgatacaaggtctatatt-atagtaaaagtctcgcttaaaatttggaacaaatctgcacccaaaaa- 18099540  T
Q  100 tatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc- 197  Q
    || |||| |||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||  |||||| ||||||||     
T  18099541 tacgtttctattgttcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgtcttg-cctcaaaactgaaacctcca 18099639  T
Q  198 atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  18099640 atcgtgccacgttgcccagccatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 18099707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 5191637 - 5191374
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    |||||||| || ||||||||||||| |||||| |    
T  5191637 tgtttcagccccctctatctccaagtttgcttagatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaaaa-t 5191539  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    |||||| | |||||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||  |||||| |||||||| |    
T  5191538 atgtttctgtttttcgctgccagcgcaccatcgtgccacgatgagatcccatcgtgccacgatttttccagtaccttg-cctcaaaactgaaacctccaa 5191440  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcac 264  Q
    |||||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||| ||||||    
T  5191439 tcgtgccacgatgcccagcaatcgtgccacgattctgcagaaatctgattttaagttaactctcac 5191374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 35777405 - 35777163
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  35777405 tgtttcagccccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcaccca-aaaat 35777307  T
Q  101 atgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatc 200  Q
    ||||||   ||||  | |||||||||||||||||||||                     |||||||||||||||||||||||||||||||||||||||||    
T  35777306 atgtttatgtttttgctgccagcgcaccatcgtgccac---------------------gatttttccagtgccttgcccaaaaaactaaaacctccatc 35777228  T
Q  201 gtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| |||||||    
T  35777227 gtgccacgttgcccagctgtcgtgccacgattctgcagaaatctaattttaagttaactctcaca 35777163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 25388797 - 25388654
Alignment:
Q  64 ctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatt 163  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25388797 ctgcttaaaatctgtaacaaatctgctcccaaaaa-tatgttttatttttatctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatt 25388699  T
Q  164 tttccagtgccttgcccaaaaaactaaaacctccatcgtgccacg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25388698 tttccagtgccttgcccaaaaaactaaaacctccatcgtgccacg 25388654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 64 - 253
Target Start/End: Complemental strand, 5899659 - 5899471
Alignment:
Q  64 ctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatt 163  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  5899659 ctgcttaaaatctgtaacaaatctgtacccaaaaa-tacgttttatttttatctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatt 5899561  T
Q  164 tttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaag 253  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||  |  |||||||| |||| ||||||||||||||| ||||    
T  5899560 tttccagtgccttgcctaaaaaactaaaacatccatcgtgccacgttgcccttcaatcgtgccatgattatgcagaaacctgattataag 5899471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 64 - 265
Target Start/End: Complemental strand, 5886184 - 5885983
Alignment:
Q  64 ctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatt 163  Q
    |||||||||||||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  5886184 ctgcttaaaatctgtaacaaatttgcacccaaaaa-tacgttttatttttatctgccagcgcaccatcgtaccacgatgcgaccccatcgtgccacgatt 5886086  T
Q  164 tttccagtgccttgcccaaaaaactaaaacctccatcgtgccacg-ttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctc 262  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||| |||| |  |  |||||||||||||||| | |||||| |||||||||||| ||||    
T  5886085 tttccagtaccttgcctaaaaaactaaaacatccatcgtgccacgtttgcgcttcaatcgtgccacgattctgtaaaaacctaattttaagttaactctc 5885986  T
Q  263 aca 265  Q
    |||    
T  5885985 aca 5885983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 3 - 265
Target Start/End: Complemental strand, 26720530 - 26720268
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatat 102  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||||| || |||||||||||| | |||||||||    
T  26720530 tttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgca-ctaaaaaatat 26720432  T
Q  103 gttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atc 200  Q
    |||| | |||||  | |||||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||  |||  | |||||||| |||    
T  26720431 gtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccaatc 26720333  T
Q  201 gtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
     ||||||||||| ||||| ||||||||||||| |||||| | |||||||||||||||| |||||||    
T  26720332 ctgccacgttgctcagccatcgtgccacgattcctgcag-atcctgattttaagttaactctcaca 26720268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 1321425 - 1321161
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||   ||||||||| || ||||||||||||| | ||||||    
T  1321425 tgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aaaaat 1321327  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctc-ca 198  Q
    |||||| | |||||  | |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| ||| ||  |||  | |||||||  |    
T  1321326 atgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttg-cctcaaacttgaaacctctaa 1321228  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||  ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  1321227 tcgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 1321161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 6066069 - 6066210
Alignment:
Q  1 tgtttcagcccc-ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  6066069 tgtttcagcccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaatctgtaacaaatctgctccc-aaaaa 6066167  T
Q  100 tatgttttatttttatccgccagcgcaccatcgtgccacgatg 142  Q
    ||  |||||||||||||||||||||||||||||||||||||||    
T  6066168 tacattttatttttatccgccagcgcaccatcgtgccacgatg 6066210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 5522888 - 5523152
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| | ||||||    
T  5522888 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcactc-aaaaat 5522986  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    |||||| | |||||  | ||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||| ||  |||||| ||||| || |    
T  5522987 atgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtaccttg-cctcaaaactgaaaccaccaa 5523085  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||| ||||||||||  || |||||||||| || ||| | | |||||||||||||| |||||||    
T  5523086 tcgtgccatgttgcccagcaatcttgccacgattcctccag-atcttgattttaagttaactctcaca 5523152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 10956300 - 10956568
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||  | |||| || ||||||||||||||||||||||||||||    |||||||||| || |||||||||||||| ||||| |    
T  10956300 tgtttcagccccctctatcttcatgtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgcacctaaaaa-t 10956398  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||  | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||| |    
T  10956399 acgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgccc-caaaactgaaacctccaa 10956497  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacatttat 270  Q
    |||||||| | || |||||| | ||||||||||| |||||| | |||||||||||||||| ||||||| ||||    
T  10956498 tcgtgccatgatgtccagccat-gtgccacgattcctgcag-atcctgattttaagttaactctcacaattat 10956568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 3859512 - 3859350
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||| |||||    
T  3859512 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcaccca-aaaat 3859414  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatt 163  Q
    | |||| |||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3859413 acgtttatattattcgccgccagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatt 3859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 32264312 - 32264581
Alignment:
Q  1 tgtttcagccccctctatctcaaagtt----tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaa 96  Q
    ||||| |||||||||||||||||||||    | || ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||||||    
T  32264312 tgtttgagccccctctatctcaaagttaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgcacccaaa 32264411  T
Q  97 aaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacct 195  Q
    || ||||||| | || ||  | |||||||||||||||||||||| ||  | |||||||||||||||    ||||||| ||||||  ||||||| ||||||    
T  32264412 aa-tatgtttctgttattcgctgccagcgcaccatcgtgccacgttgcaagcccatcgtgccacgaaaaatccagtgacttgcctcaaaaactgaaacct 32264510  T
Q  196 cc-atcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcacat 266  Q
    || ||||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  32264511 ccaatcgtgccacgtt-cccagccatcgtgccacgatttctgca-aaacctgattttaagttaactctcacat 32264581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 18097173 - 18097422
Alignment:
Q  1 tgtttcagccccctctatctca-aagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaa 99  Q
    ||||| |||||||||||||||  |||||| || |||||||||||||||||||||||||||||||  ||||||||| || ||||||||||||||||||||     
T  18097173 tgtttgagccccctctatctctcaagtttactatgatacaaggtctatatttatagtaaaagtctcgcttaaaatttgaaacaaatctgcacccaaaaa- 18097271  T
Q  100 tatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca- 198  Q
    || ||||   | |||| ||||             ||||| ||| |||||||||||||||||||||||||  |||||||||  |||| || |||||||||     
T  18097272 tacgtttc--tgttattcgcc-------------gccactatgcgaccccatcgtgccacgatttttcctatgccttgcctcaaaa-ctgaaacctccaa 18097355  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  18097356 tcgtgccacgttgcccagccatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 18097422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 11163134 - 11162891
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||   ||||||||| || |||||||||||||||||||| |    
T  11163134 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatcgtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa-t 11163036  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    | |||| | || ||  ||||||||||||||||||||                     ||| |||||||||||||||||||  ||||||| ||||||||||    
T  11163035 acgtttctgttattcgccgccagcgcaccatcgtgc---------------------cacaatttttccagtgccttgcctcaaaaactgaaacctccat 11162957  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||  ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  11162956 cgtgccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 11162891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 10958596 - 10958767
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||  | |||| || ||||||||||||||||||||||||||||    |||||||||| || |||||||||||||| ||||| |    
T  10958596 tgtttcagccccctctatctttatgtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgcacctaaaaa-t 10958694  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    | |||| | || ||  | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10958695 acgtttctgttattggctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 10958767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 11170388 - 11170145
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||| |||||    
T  11170388 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccca-aaaat 11170290  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    |||||| | || ||  |||||||||||| |||| |||||                     ||||||||||||||||||||  ||||||  ||||||||||    
T  11170289 atgtttctgttattcgccgccagcgcacaatcgagccac---------------------gatttttccagtgccttgcctcaaaaaccgaaacctccat 11170211  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||   |||||||||||| |||||| | | |||||||||||||| |||||||    
T  11170210 cgtgccacgttgcccagcaaccgtgccacgattcctgcag-atcttgattttaagttaactctcaca 11170145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 50493983 - 50493895
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50493983 tgtttcagccccctctatctctcagtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgc 50493895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 148 - 266
Target Start/End: Complemental strand, 38889875 - 38889756
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcag-aaacctga 246  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||  ||| |||| |||||||||||||| |||||| |    
T  38889875 ccatcgtgccacgatttttccaatgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgccatcgtaccacgattctgcagaaaacctaa 38889776  T
Q  247 ttttaagttaattctcacat 266  Q
    ||||||||||| ||||||||    
T  38889775 ttttaagttaactctcacat 38889756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 7606878 - 7606963
Alignment:
Q  180 caaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||    
T  7606878 caaaaaactgaaacctccatcgtgccacgttgcccagccatcgtgtcacgattctgcagaaacctgattttaagttaactctcaca 7606963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 45882923 - 45882752
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||||||| |||||    
T  45882923 tgtttcagccccctctatctcatagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaattttcaacaaatctgcaccca-aaaat 45882825  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    | |||| | || ||    | |||||||||||||||||||| ||  | ||||||||| ||||||||||||||||    
T  45882824 aggtttctgttattcgttgtcagcgcaccatcgtgccacgttgcaatcccatcgtggcacgatttttccagtg 45882752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 15780844 - 15780745
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||||||||||    
T  15780844 tgtttcagccccctctatctccaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaaat 15780745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 6719396 - 6719472
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6719396 ctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 6719472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 4308554 - 4308725
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  | |  | |||| ||| ||||||||| ||    ||||    
T  4308554 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttca--ataaaa 4308651  T
Q  99 atatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||| ||||||||||||||  | | |||||||||||| ||||||  || || |||||| ||||||||||||||||    
T  4308652 atacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtg 4308725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 136 - 257
Target Start/End: Original strand, 10192401 - 10192521
Alignment:
Q  136 cacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctg 235  Q
    ||||||| || |||||||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||||||  ||  |||||||||||||| |    
T  10192401 cacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaa-ctgaaacctccatcgtgccacgttgccttgcgatcgtgccacgattccg 10192499  T
Q  236 cagaaacctgattttaagttaa 257  Q
    || ||| |||||||| ||||||    
T  10192500 cataaatctgattttcagttaa 10192521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 24979691 - 24979587
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||||||| || ||||||||||| |||||||||||| |||||  | |||||||| || |||||||||||| |||||||||    
T  24979691 tgtttcagccccctctatctcaaagtttactctgatacaaggtatatatttatagtgaaagtattacttaaaatttggaacaaatctgca-ccaaaaaat 24979593  T
Q  101 atgttt 106  Q
    ||||||    
T  24979592 atgttt 24979587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 48361943 - 48362040
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||| |||||||    
T  48361943 tgtttcagccccctgtatctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaa 48362040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 10084683 - 10084810
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatc 116  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    ||||||||| || ||||||||||||| | |||||||||||| | |||||  |    
T  10084683 tctcaaagtttgctccgatacaaggtctatatttatagtaaaagcatcgcttaaaatttggaacaaatctgcactc-aaaaatatgtttctgtttttcgc 10084781  T
Q  117 cgccagcgcaccatcgtgccacgatgaga 145  Q
     ||||||||||||||||||||||||||||    
T  10084782 tgccagcgcaccatcgtgccacgatgaga 10084810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 10191603 - 10191729
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatc 116  Q
    ||||||||||||||  |||||||||||||||||||||||||||||   ||||||||| || ||||||| ||||| | |||||||||||| | |||||  |    
T  10191603 tctcaaagtttgctccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactc-aaaaatatgtttctgtttttcgc 10191701  T
Q  117 cgccagcgcaccatcgtgccacgatgag 144  Q
     |||||||||||||||||||||||||||    
T  10191702 tgccagcgcaccatcgtgccacgatgag 10191729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 136 - 257
Target Start/End: Original strand, 10085481 - 10085601
Alignment:
Q  136 cacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctg 235  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||  ||  || ||||||||||| |    
T  10085481 cacgatgtgatcccatcgtgccacgatttttccagtgccttg-cctcaaaactgaaacctccatcgtgccacgttgccttgcgatcatgccacgattccg 10085579  T
Q  236 cagaaacctgattttaagttaa 257  Q
    || ||| |||||||| ||||||    
T  10085580 cataaatctgattttcagttaa 10085601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 265
Target Start/End: Complemental strand, 24177261 - 24176999
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatat 102  Q
    ||||||||||||||| ||||| |||| || |||||||||||||||||||||| |||||||    |||||||| || |||||||||||||  ||||| ||     
T  24177261 tttcagccccctctagctcaatgtttactatgatacaaggtctatatttataataaaagtatcccttaaaatttggaacaaatctgcacttaaaaa-tac 24177163  T
Q  103 gttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atc 200  Q
    |||| | |||||  || ||| ||||||||||||||||  || || |||||||||||||  ||||||||||| |||| |   | |||| ||||  || |||    
T  24177162 gtttatgtttttcgcctccaacgcaccatcgtgccacattgcgatcccatcgtgccacattttttccagtgacttg-cttcagaactgaaacaaccaatc 24177064  T
Q  201 gtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||| ||   |||||||||| |||| ||| ||| |||||||||||||| |||||||    
T  24177063 gtgccacgttgccctgcaaacgtgccacgatttctccag-aacttgattttaagttaactctcaca 24176999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 32219079 - 32218941
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||  |  ||||||||||||||||||||| | |||||  | |||||||| || |||||||||||||||| |||||    
T  32219079 tgtttcagccccctctatctcaaagtttagtcagatacaaggtctatatttatactgaaagtattacttaaaatttggaacaaatctgcaccca-aaaat 32218981  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacg 139  Q
    | |||| | || ||  | ||||||||||||||||||||||    
T  32218980 acgtttctcttattcgctgccagcgcaccatcgtgccacg 32218941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 35918222 - 35918393
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||  | |  |||||| ||  ||||||||| ||    ||||    
T  35918222 tgtttcagccccctctatctcaaaatttgctatgatacaaggtctatatttatagtgaaagtaatccctttaaaaactaaaacaaatcttca--ataaaa 35918319  T
Q  99 atatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||| ||||||||||||||  | | |||||||||||| ||| ||  || || ||||||| |||||||||||||||    
T  35918320 atacgttttatttttatcttcaatcgcaccatcgtggcactattcgatccaatcgtgctacgatttttccagtg 35918393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 265
Target Start/End: Original strand, 6719532 - 6719651
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc---atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacct 244  Q
    |||||||||||||||||||||||||| ||||| ||||| || |||||||    ||||||||||| |||||  |  |||||||||||||  ||||||||||    
T  6719532 ccatcgtgccacgatttttccagtgcattgcctaaaaa-ctgaaacctctccaatcgtgccacgatgcccttcaatcgtgccacgattaagcagaaacct 6719630  T
Q  245 gattttaagttaattctcaca 265  Q
    |||||||||||||||||||||    
T  6719631 gattttaagttaattctcaca 6719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 25388850 - 25388794
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25388850 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 25388794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 43228275 - 43228108
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||||  | |  | |||| ||| ||||||||| ||    ||||    
T  43228275 tgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttca--ataaaa 43228178  T
Q  99 atatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcc 168  Q
    ||| ||||||||||||||  | | |||||||||||| ||||||  || || |||||| ||||||||||||    
T  43228177 atacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttcc 43228108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 51727279 - 51727450
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||  | |  | |||| ||| ||||||||| ||    ||||    
T  51727279 tgtttcagccccctttatctcaaagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttca--ataaaa 51727376  T
Q  99 atatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    ||| ||||||||||||||  | | | |||||||||| ||||||  || |  |||||| ||||||||||||||||    
T  51727377 atacgttttatttttatcttcaatcacaccatcgtggcacgattcgatcaaatcgtggcacgatttttccagtg 51727450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12268239 - 12268329
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcac 91  Q
    ||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||||   ||||||||| || ||||||| |||||    
T  12268239 tgtttcagctccctctatctcaaagtttactctgatacaagttctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcac 12268329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 18162639 - 18162551
Alignment:
Q  11 ccctctatctcaaagtttgctt-tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||| |||||| ||  ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||||||||||    
T  18162639 ccctctatctccaagtttactcatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaa 18162551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 38210320 - 38210265
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctg 88  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  38210320 tgatacaaggcctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctg 38210265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1313394 - 1313333
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||    
T  1313394 tgtttcagccccctctatctcaaggtttactctgattcaaggtctatatttatagtaaaagt 1313333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43226070 - 43226009
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| |||||    
T  43226070 tgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaagt 43226009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 6066211 - 6066254
Alignment:
Q  164 tttccagtgccttgcccaaaaaactaaaacctccatcgtgccac 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  6066211 tttccagtgccttgcccaaaaaactaaaacctccatcgtgccac 6066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 51675028 - 51675087
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| | ||||||||| |||||||||||||||||||    
T  51675028 tgtttcagccccctctatctcaacgtttacattgatacaacgtctatatttatagtaaaa 51675087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6561794 - 6561740
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    ||||||||||||||||||||||| |||| || |||||||||||||||||||||||    
T  6561794 tgtttcagccccctctatctcaaggtttactctgatacaaggtctatatttatag 6561740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 141
Target Start/End: Original strand, 6719469 - 6719546
Alignment:
Q  64 ctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgat 141  Q
    |||||||||||||||| ||||||||||||| |||||||||||| | || ||  ||||||||||||||||||||||||||    
T  6719469 ctgcttaaaatctgtatcaaatctgcaccc-aaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgat 6719546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 25388663 - 25388618
Alignment:
Q  220 tcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  25388663 tcgtgccacgattctgcagaaacctgattttaagttaactctcaca 25388618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38890024 - 38889935
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||    ||||||||||   ||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  38890024 tgtttcagccccctctatctctctcaaagtttgct---atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 38889935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53915769 - 53915830
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||| || |||| || |||| |||||||||||||||||||||||||    
T  53915769 tgtttcagccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagt 53915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1626956 - 1627016
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  1626956 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 1627016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 3859362 - 3859314
Alignment:
Q  220 tcgtgccacgattctgcagaaacctgattttaagttaattctcacattt 268  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  3859362 tcgtgccacgattatgcagaaacctgattttaagttaactctcacattt 3859314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 53597216 - 53597164
Alignment:
Q  10 cccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  53597216 cccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaagt 53597164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 28181006 - 28180948
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  28181006 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 28180948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13420445 - 13420506
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| ||| |||||||| ||||||||||||||||   |||||||||||||||||||    
T  13420445 tgtttcagcctcctatatctcaaggtttgctttgatacaaaacctatatttatagtaaaagt 13420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23633444 - 23633383
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| ||||| ||||||||||| |||| || |||||||| |||||||||||||||||||||    
T  23633444 tgttttagccctctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 23633383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28761701 - 28761762
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||||||||||||||| |||| || |||| ||| |||||||||||||||||||||    
T  28761701 tgtttcaaccccctctatctcaaggtttactctgatgcaaagtctatatttatagtaaaagt 28761762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 32218912 - 32218836
Alignment:
Q  190 aaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||| |||||||||||||||||  | ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  32218912 aaacctccaatcgtgccacgttgcccaatcatcgtgccacgatttctgcag-aacctgattttaagttaactctcaca 32218836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51943355 - 51943294
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||| ||||||||||| | |||| || |||| |||||||||||||||||||||||||    
T  51943355 tgtttcagcaccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagt 51943294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53917937 - 53917998
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||| ||||||| ||||  | |||| |||||||||||||||||||||||||    
T  53917937 tgtttcagccccctccatctcaaggtttaatctgattcaaggtctatatttatagtaaaagt 53917998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 880725 - 880785
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||| |||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  880725 tgtttcagacccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 880785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28137568 - 28137628
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| |  |||||||||||||||||    
T  28137568 tgtttcagccccctctatctcaaggtttactctgatacaacgcatatatttatagtaaaag 28137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43423736 - 43423796
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||| |||||| |||| |  |||||||| ||||||||||||||||||||    
T  43423736 tgtttcagccccctctttctcaaggtttacagtgatacaatgtctatatttatagtaaaag 43423796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47701868 - 47701928
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||| |||||||| |||| |  |||||||| ||||||||||||||||||||    
T  47701868 tgtttcagccccctttatctcaaggtttacactgatacaatgtctatatttatagtaaaag 47701928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 48362119 - 48362186
Alignment:
Q  198 atcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||| || ||||||||||| |||| ||| |||||||||||||||||| |||||||    
T  48362119 atcgtgccacgttgcccaaccatcgtgccacgatttctacag-aacctgattttaagttaactctcaca 48362186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27635900 - 27635959
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||| |||| || | || |||||||||||||| ||||||||    
T  27635900 tgtttcagccccctctatctcaaggtttactctaattcaaggtctatatttgtagtaaaa 27635959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 3314666 - 3314608
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||| |||| |  ||||||||  |||||||||||||||||||    
T  3314666 tttcagccccctctatctcaaggtttacactgatacaatatctatatttatagtaaaag 3314608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 27101558 - 27101704
Alignment:
Q  26 tttgctttgatacaaggtctatatttatagtaaaagtcctgctt--aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagc 123  Q
    |||||| |||||||||||||||||||||||| |||||  | | |  |||| ||| ||||||||| ||    ||||||| ||||||||||||||  | | |    
T  27101558 tttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttcaat--aaaaatacgttttatttttatcttcaatc 27101655  T
Q  124 gcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    |||||||| || ||||||  || || |||||| ||||||||||||||||    
T  27101656 gcaccatcttggcacgattcgatccaatcgtggcacgatttttccagtg 27101704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 38889938 - 38889897
Alignment:
Q  64 ctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  38889938 ctgcttaaaatctgtaacaaatctgcaccca-aaaatatgttt 38889897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4560538 - 4560599
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||||||  ||||||| ||||||| |||||    
T  4560538 tgtttcagccccctctatctcaatgtttactatgatacatagtctatacttatagtgaaagt 4560599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6484369 - 6484308
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| |  |||||||| | |||||||||||| ||||||    
T  6484369 tgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagcaaaagt 6484308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 23 - 172
Target Start/End: Original strand, 25690651 - 25690800
Alignment:
Q  23 aagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgcc 120  Q
    ||||||||| |||||||||||||||||||||||| |||||  | |  | |||| ||| ||||||||| ||    ||||||| ||||||||||||||  |     
T  25690651 aagtttgctctgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttca--ataaaaatacgttttatttttatcttca 25690748  T
Q  121 agcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    | |||||||||||| ||| ||  || || ||| || ||||||||||||||||    
T  25690749 atcgcaccatcgtggcacaattcgatccaatcatggcacgatttttccagtg 25690800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4104168 - 4104233
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||    |||||||    ||||||||||||||||||||||||||||||    
T  4104168 tgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 4104233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5927037 - 5927097
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||| ||||||||||| |||| |   ||||||| ||||||||||||||||||||    
T  5927037 tgtttcagccctctctatctcaaggtttacaccgatacaatgtctatatttatagtaaaag 5927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 13893347 - 13893287
Alignment:
Q  31 tttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcac 91  Q
    |||||||||| |||||||||||||||||||||    |||||||| || |||||||||||||    
T  13893347 tttgatacaatgtctatatttatagtaaaagtaacccttaaaatttggaacaaatctgcac 13893287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28100314 - 28100374
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| | || || |||||||| |  |||||||||||||||||    
T  28100314 tgtttcagccccctctatctcaagggttactctgatacaacgcttatatttatagtaaaag 28100374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36011811 - 36011751
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||| |||||||| |||| |  | |||||| ||||||||||||||||||||    
T  36011811 tgtttcagccccctttatctcaaggtttacactaatacaatgtctatatttatagtaaaag 36011751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53468728 - 53468788
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||| ||||| || |||| |  |||||||| ||||||||||||||||||||    
T  53468728 tgtttcagccccctttatctaaaggtttacactgatacaatgtctatatttatagtaaaag 53468788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 53591179 - 53591119
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| |||||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  53591179 tgtttcagcctcctctatctcaaggtttacacttatacaatgtctatatttatagtaaaag 53591119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3306783 - 3306724
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||||||||| |||||| | |||| |  |||||||| |||||||||||||||||||    
T  3306783 tgtttcagccccctatatctctaggtttacactgatacaatgtctatatttatagtaaaa 3306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6231433 - 6231374
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||| |||||||||||  ||| |  |||||||| |||||||||||||||||||    
T  6231433 tgtttcagcccgctctatctcaagatttacactgatacaatgtctatatttatagtaaaa 6231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 9604979 - 9605026
Alignment:
Q  95 aaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatg 142  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||||    
T  9604979 aaaaatatgttttatttttatcttcaatcgcaccatcgtgccacgatg 9605026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 31151330 - 31151271
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctt-tgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||| | |||| | | |||||||| ||||||||||||||||||||    
T  31151330 tttcagccccctctatctcgaggtttacatctgatacaaagtctatatttatagtaaaag 31151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43421688 - 43421747
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||| |||| |||||||||| |||| |  |||||||| |||||||||||||||||||    
T  43421688 tgtttcaaccccttctatctcaaggtttacactgatacaatgtctatatttatagtaaaa 43421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 543
Target Start/End: Original strand, 1076815 - 1076857
Alignment:
Q  501 aataaacttggggaaggtggatttggaccagtgtataaggtaa 543  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||    
T  1076815 aataaacttggagaaggtggctttggaccagtatataaggtaa 1076857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 501 - 543
Target Start/End: Complemental strand, 1300205 - 1300163
Alignment:
Q  501 aataaacttggggaaggtggatttggaccagtgtataaggtaa 543  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||    
T  1300205 aataaacttggagaaggtggctttggaccagtatataaggtaa 1300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 27101472 - 27101519
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||  |||||| |||||||||||||||||||||||| |||||    
T  27101472 ctctatctcaa--tttgctctgatacaaggtctatatttatagtgaaagt 27101519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 455855 - 455826
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  455855 tgatacaaggtctatatttatagtaaaagt 455826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 458232 - 458203
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  458232 tgatacaaggtctatatttatagtaaaagt 458203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 746703 - 746674
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  746703 tgatacaaggtctatatttatagtaaaagt 746674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 10621847 - 10621876
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  10621847 tgatacaaggtctatatttatagtaaaagt 10621876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 25533386 - 25533357
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  25533386 tgatacaaggtctatatttatagtaaaagt 25533357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 29956636 - 29956587
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| | |||||| ||||||||||||||| |||||    
T  29956636 ctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaagt 29956587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 30005791 - 30005742
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| | |||||| ||||||||||||||| |||||    
T  30005791 ctctctctcaaagtttgctctaatacaaagtctatatttatagtgaaagt 30005742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 31021450 - 31021479
Alignment:
Q  31 tttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||||||||||||||||||||||||||    
T  31021450 tttgatacaaggtctatatttatagtaaaa 31021479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 42990234 - 42990205
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  42990234 tgatacaaggtctatatttatagtaaaagt 42990205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 890044 - 890104
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||  |||||||||||| |||| |  ||||||||  |||||||||||||||||||    
T  890044 tgtttcagcttcctctatctcaaggtttacactgatacaatatctatatttatagtaaaag 890104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28102275 - 28102335
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| | || || | |||||| |  |||||||||||||||||    
T  28102275 tgtttcagccccctctatctcaagggttactctaatacaacgcttatatttatagtaaaag 28102335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 39715445 - 39715393
Alignment:
Q  10 cccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| |||| |  |||||||| |||||||||||||| ||||||    
T  39715445 cccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaagt 39715393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 47149205 - 47149233
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  47149205 tgatacaaggtctatatttatagtaaaag 47149233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 54691854 - 54691906
Alignment:
Q  9 ccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||| || |||| || |||||||| | ||||||||||||||||||    
T  54691854 ccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaag 54691906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 2e-87; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 33311148 - 33310954
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33311148 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 33311050  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33311049 gtgccttgcccaaaaaactaaaacctccatcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 33310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 76 - 265
Target Start/End: Complemental strand, 33308873 - 33308685
Alignment:
Q  76 tgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcct 175  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33308873 tgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcct 33308775  T
Q  176 tgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33308774 tgcccaaaaaactaaaacctccatcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 33308685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 77 - 265
Target Start/End: Original strand, 26068695 - 26068882
Alignment:
Q  77 gtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcctt 176  Q
    ||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26068695 gtaacaaatctgctcccaaaaa-tacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcctt 26068793  T
Q  177 gcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26068794 gcccaaaaaactaaaacctccatcatgccacgttgccttgccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 26068882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 70 - 265
Target Start/End: Original strand, 29755085 - 29755279
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29755085 aaaaactgtaacaaatctgctcccaaaa-atatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 29755183  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  29755184 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 29755279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 70 - 265
Target Start/End: Original strand, 26066417 - 26066611
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26066417 aaaaactgtaacaaatctgctcccaaaaa-tacgttttatttttatccgccagcgcaccattgtgccacgatgagaccccatcgtgccacgatttttcca 26066515  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  26066516 gtgccttgcccaaataactaaaacctccatcgtgccacgttgccttgccgtcgtgccacgattctacagaaacctgattttaagttaactctcaca 26066611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 14507450 - 14507716
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||   ||||||||| || ||||||||| ||| |||||| |    
T  14507450 tgttttagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctacactcaaaaa-t 14507548  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgc--ccaaaaaactaaaacctcc 197  Q
    |||||| | |||||  | | ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||   | |||||||| ||||||||    
T  14507549 atgtttctgtttttcgctggcagcgcaccatcgtgccacgatgcgaccccatcgtgccaccatttttccagtgccttgtatcaaaaaaactgaaacctcc 14507648  T
Q  198 atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||    
T  14507649 atcgtgccacgttgcccagccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 14507716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 19227683 - 19227948
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||    |||||||| || ||||||||||||||||||||||    
T  19227683 tgtttgagccccctttatctcaaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcacccaaaaaat 19227782  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    |||||| | || ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| | ||||||||||    
T  19227783 atgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaattgaaacctccat 19227882  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    | |||||||||||||| || ||||||||||||| |||||| | | | |||||||||||| |||||||    
T  19227883 catgccacgttgcccaaccatcgtgccacgattcctgcag-atcttaattttaagttaactctcaca 19227948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 11983304 - 11983558
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||   | ||||||| || ||||||||||||| | ||||||    
T  11983304 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgtttaaaatttgaaacaaatctgcactc-aaaaat 11983402  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    |||||| | |||||  | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |  ||  | |||| ||||||||||    
T  11983403 atgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc--ttacctcacaactgaaacctccat 11983500  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 257  Q
    ||| ||| |||||||| || |||| |||||||||||||||||||||||||||||||||    
T  11983501 cgtaccatgttgcccaaccatcgtaccacgattctgcagaaacctgattttaagttaa 11983558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 8995518 - 8995254
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||| |||||||||||||||  ||||| || ||||||||| ||||||||||||||||||||   ||||||||| || |||||||||||||||||||  |    
T  8995518 tgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa--t 8995421  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||  | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |    
T  8995420 acgtttctgttatttgctgtcagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgccca-aaaactgaaacctccaa 8995322  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacat 266  Q
    |||||||||||||||||||| ||||||||||||| || ||| | |||||||||||||||| ||||||||    
T  8995321 tcgtgccacgttgcccagccatcgtgccacgattcctacag-atcctgattttaagttaactctcacat 8995254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 9019965 - 9019701
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||| |||||||||||||||  ||||| || ||||||||| ||||||||||||||||||||   ||||||||| || |||||||||||||||||||  |    
T  9019965 tgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa--t 9019868  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||  | | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |    
T  9019867 acgtttctgttatttgctgtcagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgccca-aaaactgaaacctccaa 9019769  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacat 266  Q
    |||||||||||||||||||| ||||||||||||| || ||| | |||||||||||||||| ||||||||    
T  9019768 tcgtgccacgttgcccagccatcgtgccacgattcctacag-atcctgattttaagttaactctcacat 9019701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 4 - 267
Target Start/End: Original strand, 15530400 - 15530663
Alignment:
Q  4 ttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatg 103  Q
    ||||||||||||||||||  ||||| || ||||||||||||||||||||||||||||||   ||||||||| || |||||| |||||||| |||||||||    
T  15530400 ttcagccccctctatctcccagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaacctgcaccc-aaaaatatg 15530498  T
Q  104 ttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcg 201  Q
    ||| |||  ||  | |||||| |||||||||||||||||| | ||||||||| |||||| ||||| ||||| ||| ||  |||  | |||||||| || |    
T  15530499 tttctataattcactgccagcacaccatcgtgccacgatgcggccccatcgtaccacgaattttcgagtgctttg-cctcaaacttgaaacctccaattg 15530597  T
Q  202 tgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcacatt 267  Q
    ||||||||| ||||||| ||||||||||||| |||||| | |||||||||||||||| |||||||||    
T  15530598 tgccacgttacccagccatcgtgccacgattcctgcag-atcctgattttaagttaactctcacatt 15530663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 30729103 - 30729281
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||| |||| || ||||||||| |||||||||||||||||||| | ||||||||| || ||||||||||||||| ||||||    
T  30729103 tgtttcagccccctctatctcaaggtttactctgatacaagatctatatttatagtaaaagtaccgcttaaaatttggaacaaatctgcaccc-aaaaat 30729201  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc 179  Q
    | |||| | || ||  | |||||||||| ||||||||||| || |||||||||||| |||||  ||||||||| ||||||    
T  30729202 acgtttctgttattcgctgccagcgcactatcgtgccacgttgtgaccccatcgtggcacgaaatttccagtgacttgcc 30729281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 26068590 - 26068662
Alignment:
Q  17 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26068590 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 26068662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 26066319 - 26066389
Alignment:
Q  17 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26066319 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 26066389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 29754983 - 29755059
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29754983 ctctctctcagagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 29755059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 70 - 208
Target Start/End: Original strand, 4816612 - 4816749
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    ||||||||||||||||||||||| |||||||||||||   ||||  |  ||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  4816612 aaaatctgtaacaaatctgcacc-aaaaaatatgtttctgtttttgctaccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 4816710  T
Q  170 gtgccttgcccaaaaaactaaaacctcc-atcgtgccacg 208  Q
    || ||||| ||  |||||| |||||||| |||||||||||    
T  4816711 gtaccttg-cctcaaaactgaaacctccaatcgtgccacg 4816749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1072152 - 1072249
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||| || ||||||||||||||| || |||||||| |||||||||||||||||||||  |||||||||| || ||||||||||||||||||||    
T  1072152 tgtttcagctccttctatctcaaagtttactctgatacaatgtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaaa 1072249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12195790 - 12195851
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12195790 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 12195851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15532956 - 15533053
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||    |||||||| || |||||||||||||| |||||    
T  15532956 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtataacttaaaatttggaacaaatctgcacctaaaaa 15533053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15541415 - 15541512
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||    |||||||| || |||||||||||||| |||||    
T  15541415 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtgtaacttaaaatttggaacaaatctgcacctaaaaa 15541512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 33308966 - 33308905
Alignment:
Q  28 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33308966 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 33308905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 33311235 - 33311174
Alignment:
Q  28 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33311235 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 33311174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 4816552 - 4816608
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4816552 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 4816608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 20915665 - 20915721
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20915665 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 20915721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28241596 - 28241657
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  28241596 tgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaagt 28241657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 32280035 - 32279897
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa-a 99  Q
    |||||||||||| |||||||| |||||| || ||||||||||||||||| ||||| ||||||   ||||||||| || ||||||||||||| |||||| |    
T  32280035 tgtttcagcccc-tctatctccaagtttactatgatacaaggtctatatatataggaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaata 32279937  T
Q  100 tatgttttatttttatccgccagcgcaccatcgtgccacga 140  Q
     || || | || ||  |||||||||||||||||||||||||    
T  32279936 cat-ttatgttattcgccgccagcgcaccatcgtgccacga 32279897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 14459042 - 14459093
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttata 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14459042 tttcagccccctctatctcaaagtttgctctgatacaaggtctatatttata 14459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1230524 - 1230585
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  1230524 tgtttcaaccctctctatctcaaagtttgctatgatacaaggtctatatttatagtgaaagt 1230585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 1072312 - 1072396
Alignment:
Q  183 aaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcacat 266  Q
    |||||| ||||||||| ||||||||||||||||| || |||| |||||| |||||||| |||||||||||||||||| ||||||||    
T  1072312 aaaacttaaacctccaatcgtgccacgttgcccaaccatcgtaccacgatttctgcag-aacctgattttaagttaactctcacat 1072396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17852581 - 17852520
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||| ||| |||||||||||||||||||||    
T  17852581 tgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaagt 17852520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3630139 - 3630199
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||  ||| | ||||||||| ||||||||||||||||||||    
T  3630139 tgtttcagccccctctatctcaagttttacattgatacaatgtctatatttatagtaaaag 3630199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13057233 - 13057173
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  13057233 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 13057173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24338723 - 24338783
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||||||    
T  24338723 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 24338783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32447591 - 32447651
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| | ||||||||||||||||||    
T  32447591 tgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttatagtaaaag 32447651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 3028127 - 3028186
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| | |||||||  |||| |||||||||||||||||||||||||||||||||    
T  3028127 tttcagccccttttatctcatggtttactttgatacaaggtctatatttatagtaaaagt 3028186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 172
Target Start/End: Complemental strand, 26084957 - 26084818
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgctt--aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccat 130  Q
    |||||||||||||||||||||||| |||||  | | |  |||| ||| ||||||||| ||    ||||||| ||||||||||||||  | | ||||||||    
T  26084957 tgatacaaggtctatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttcaat--aaaaatacgttttatttttatcttcaatcgcaccat 26084860  T
Q  131 cgtgccacgatgagaccccatcgtgccacgatttttccagtg 172  Q
    |||||||||||| ||  | |||||| ||||||||||||||||    
T  26084859 cgtgccacgatgcgattcaatcgtggcacgatttttccagtg 26084818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15346427 - 15346369
Alignment:
Q  4 ttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||| |||| |  |||||||| |||||||||||||||||||||    
T  15346427 ttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagt 15346369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25477313 - 25477253
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||||| ||||||||    
T  25477313 tgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaag 25477253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 4816740 - 4816787
Alignment:
Q  220 tcgtgccacgattctgcagaaa-cctgattttaagttaattctcacat 266  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  4816740 tcgtgccacgattctgcagaaaacctgattttaagttaactctcacat 4816787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19704862 - 19704905
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagt 56  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  19704862 ctctctctcaaagtttgctctgatacaaggtctatatttatagt 19704905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3390418 - 3390357
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||||| ||||    |||||||| |||||||||||||||||||||    
T  3390418 tgtttcagccccgtctatctcaaggtttatactgatacaatgtctatatttatagtaaaagt 3390357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 26932857 - 26932906
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||||||||||| ||| |||||||||||||||||||| |||||    
T  26932857 ctctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 26932906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3234006 - 3234065
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||| || |||| |  |||||||| ||||||||||||||||||||    
T  3234006 tgtttcagccccctctatcttaaggtttacactgatacaa-gtctatatttatagtaaaag 3234065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 12186345 - 12186405
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctt-tgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| |||||||||| |||| | | ||||||||||| ||||||||||||||||||    
T  12186345 tttcagccccttctatctcaaggtttacatgtgatacaaggtttatatttatagtaaaagt 12186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 18318048 - 18318004
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||    
T  18318048 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 18318004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 17012080 - 17012029
Alignment:
Q  4 ttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    ||||| |||||||||||||| |||| ||  ||||||||||||||||||||||    
T  17012080 ttcagacccctctatctcaaggtttactccgatacaaggtctatatttatag 17012029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3632213 - 3632271
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    ||||||| | ||||||||||||| |||| |  |||||||| ||||||||||||||||||    
T  3632213 tgtttcaactccctctatctcaaggtttacactgatacaatgtctatatttatagtaaa 3632271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 2629197 - 2629226
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  2629197 tgatacaaggtctatatttatagtaaaagt 2629226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 30034914 - 30034943
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  30034914 tgatacaaggtctatatttatagtaaaagt 30034943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13039793 - 13039733
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| ||| |||||||| |||| |  ||||||||  |||||||||||||||||||    
T  13039793 tgtttcagcctcctatatctcaaggtttacactgatacaatatctatatttatagtaaaag 13039733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 13870705 - 13870749
Alignment:
Q  10 cccctctatctcaaagtttgctttgatacaaggtctatatttata 54  Q
    |||||||||||||| ||||||| |||||||| | |||||||||||    
T  13870705 cccctctatctcaaggtttgctctgatacaaagcctatatttata 13870749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22490678 - 22490618
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  | || ||| |||||||||||| |||||||    
T  22490678 tgtttcagccccctctatctcaaggtttacactaattcaatgtctatatttatggtaaaag 22490618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 163; Significance: 9e-87; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 24162487 - 24162752
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||||||| |    
T  24162487 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcacccaaaaa-t 24162585  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcc-caaaaaactaaaacctcca 198  Q
    | |||| || | ||  | |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  24162586 acgtttctaatattcgcagccagcgcacaatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcca 24162685  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||| || | ||||||||||||||||||||| |||||||||||||| |||||||    
T  24162686 tcgtgccacgttgcccaaccattgtgccacgattctgcagaaacttgattttaagttaactctcaca 24162752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 70 - 265
Target Start/End: Original strand, 36559164 - 36559358
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36559164 aaaaactgtaacaaatctgctcccaaaa-atatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 36559262  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  36559263 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 36559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 27104779 - 27104523
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||| || ||||||||||||| |||||| |    
T  27104779 tgtttcagccccctctatctcaaagttttctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcactcaaaaa-t 27104681  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    |||||| | |||||  | ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  27104680 atgtttatgtttttccctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccat 27104581  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 257  Q
    |||||||||||||||  |  |||||||||||||||||||||| |||||||||||||||    
T  27104580 cgtgccacgttgcccttcaatcgtgccacgattctgcagaaatctgattttaagttaa 27104523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 19504620 - 19504885
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    |||||||| || |||||||||||||| ||||| |    
T  19504620 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcacctaaaaa-t 19504718  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
     ||||| | || ||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  19504719 gtgtttctgttattcgtcgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaattaaaacctccat 19504818  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcacat 266  Q
    ||||||||||||||  ||| |||||||| |||||||| |||||||||||||||||||| | ||||||    
T  19504819 cgtgccacgttgccttgccatcgtgccatgattctgctgaaacctgattttaagttaactttcacat 19504885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 19502286 - 19502542
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |    |||||||| || | |||||||||| ||||||| |    
T  19502286 tgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaattttcccttaaaatttggatcaaatctgcaaccaaaaa-t 19502384  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccat 199  Q
    |||||| | || ||   |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  19502385 atgtttctgttattcgtcgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctccat 19502484  T
Q  200 cgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 257  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||    
T  19502485 cgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaa 19502542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 75 - 265
Target Start/End: Original strand, 45332486 - 45332675
Alignment:
Q  75 ctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||    
T  45332486 ctgtaacaaatctgctcccaaaaa-tacgttttatttttatccgccagcgcaccatcgtgccacgatgtgaccccatcgttccacgatttttccagttcc 45332584  T
Q  175 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45332585 ttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 45332675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 42064495 - 42064231
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||| | |||||||    
T  42064495 tgtttcagctccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgca-ctaaaaaat 42064397  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca- 198  Q
    |||||| | |||||  | ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||  |||  | |||||||||     
T  42064396 atgtttctgtttttcgctgccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagtgctttg-cctcaaacttgaaacctccag 42064298  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    |||| ||||||||||||||  ||||||||||||| |||||| | | |||||||||||||| |||||||    
T  42064297 tcgtaccacgttgcccagcaatcgtgccacgattcctgcag-atcttgattttaagttaactctcaca 42064231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 127 - 265
Target Start/End: Original strand, 36561539 - 36561677
Alignment:
Q  127 ccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgcc 226  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||    
T  36561539 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgtgaagcccagccgtcgtgcc 36561638  T
Q  227 acgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  36561639 acgattgtgcagaaacctgattttaagttaactctcaca 36561677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 13910319 - 13910491
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    |||||||| || ||||||||||||| | ||||||    
T  13910319 tgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactc-aaaaat 13910417  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgc 173  Q
    |||||| | |||||  | ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  13910418 atgtttctgtttttcgctgccagcgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgc 13910491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 6259090 - 6259351
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||| || |||||||||||||||||  | | ||||||||||||||||||||||||||||   ||||||||| || ||||| ||||||||| ||||||    
T  6259090 tgtttcatcctcctctatctcaaagtttagtctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaagtctgcaccc-aaaaat 6259188  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    |||||| | || ||  ||||||||||||||||||| |||| || || |||||||||||||||||||||||||| |||  ||  |||||| |||| ||| |    
T  6259189 atgtttctgttattcaccgccagcgcaccatcgtgtcacgttgcgatcccatcgtgccacgatttttccagtgactt-tcctcaaaactgaaacatccaa 6259287  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctc 262  Q
    | |||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||| ||||    
T  6259288 tagtgccacgttgcacagccatcgtgccacgatttctgcag-aacctgattttaagttaactctc 6259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 21520968 - 21521234
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    |||||||||||| ||||||||  |||||||  | ||||||||||| ||||||||||||||||||   ||||||| | || ||||||||||||||||||||    
T  21520968 tgtttcagccccatctatctctcaaagtttagtctgatacaaggtttatatttatagtaaaagtatcgcttaaattttggaacaaatctgcacccaaaaa 21521067  T
Q  99 atatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc 197  Q
     || |||| | || ||  | |||||||||||||||||||||| || || ||||||||| |||||||||||||||| |||| |   |||||| ||||||||    
T  21521068 -tacgtttatgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcacgatttttccagtggcttg-cttcaaaactgaaacctcc 21521165  T
Q  198 -atcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
     ||||||||||||||||||||| ||||||||||||| ||| || |||||||||||||||||| |||||||    
T  21521166 aatcgtgccacgttgcccagccatcgtgccacgattcctgtag-aacctgattttaagttaactctcaca 21521234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 40032333 - 40032586
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||   ||||||||  || ||||||||||||||| ||||||    
T  40032333 tgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaacttggaacaaatctgcaccc-aaaaat 40032431  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||  | ||||||||||||||||           | |||||||||||||||    ||||||| ||||  |  |||||| |||||||| |    
T  40032432 acgtttctgttattcgctgccagcgcaccatcgt-----------atcccatcgtgccacgaaaaatccagtgacttg-tctcaaaactgaaacctccaa 40032519  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| |||||||    
T  40032520 tcgtgccacgttgcccagccatcgtgccacgatttctgcag-aacctgattttaagttaactctcaca 40032586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 36561441 - 36561532
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgat 162  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36561441 aaaaactgtaacaaatctgctcccaaaa-atatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgat 36561532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 22407684 - 22407948
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||| |||| ||||||| ||||| || ||||||||||||||||||||||||||||||  |||||||||| |  ||||||||||||||| ||||||    
T  22407684 tgtttcagcaccctatatctcacagtttactctgatacaaggtctatatttatagtaaaagtattgcttaaaattttgaacaaatctgcaccc-aaaaat 22407782  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||  | |||| ||||||||||||||||| || || ||||||||||||| |||||| || || |||| ||  |||||| |||| ||| |    
T  22407783 acgtttctgttattcgctgccaacgcaccatcgtgccacgttgtgatcccatcgtgccacaattttttcactgacttg-cctcaaaactgaaacatccaa 22407881  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||| ||| |||  |  ||||||||||||| |||||| ||||| ||||||| |||| |||||||    
T  22407882 tcgtgccatgttacccttcaatcgtgccacgattcctgcag-aacctaattttaaattaactctcaca 22407948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 148 - 257
Target Start/End: Original strand, 43623968 - 43624077
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 246  Q
    ||||||||||||||||||| ||||||||||||  |||| || ||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  43623968 ccatcgtgccacgattttttcagtgccttgcctcaaaa-ctgaaacctccaatcgtgccatgttgcccagccatcgtgccatgattctgcagaaacctga 43624066  T
Q  247 ttttaagttaa 257  Q
    |||||||||||    
T  43624067 ttttaagttaa 43624077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 36559067 - 36559138
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36559067 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 36559138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 36561344 - 36561415
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36561344 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 36561415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 6264420 - 6264517
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||| |   ||||||||| || ||||||||||||||||||||    
T  6264420 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaaatatcgcttaaaatttggaacaaatctgcacccaaaaa 6264517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 22287611 - 22287706
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaa 96  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||   ||||||||| || ||||||| ||||||||||    
T  22287611 tgtttcagccccctatatctcaaagtttactttaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaa 22287706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 43623843 - 43623982
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||| |||||||||||||  ||||| || ||||||||||||||| ||||||||||||||  |||||||||| || |||||||||||||||  |||||    
T  43623843 tgtttcacccccctctatctcccagtttactctgatacaaggtctatttttatagtaaaagtattgcttaaaatttggaacaaatctgcaccc--aaaat 43623940  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgat 141  Q
    | |||| | || ||  | ||||||||||||||||||||||||    
T  43623941 acgtttatgttatttgctgccagcgcaccatcgtgccacgat 43623982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 45280260 - 45280425
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgc--ttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||  | |  | |||| ||| ||||||||| ||    ||||    
T  45280260 tgtttcagccccctctatctcaaagtttgctctgatacaaggtatatatttatagtgaaagtaatcccttaaaaaactgaaacaaatcttca--ataaaa 45280357  T
Q  99 atatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgattttt 166  Q
    ||| ||||||||||||||  | | |||||||||||| ||||||  || || |||||| ||||||||||    
T  45280358 atacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgattttt 45280425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 45332384 - 45332456
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgctt-aaaatctgtaacaaatctgc 89  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  45332384 tctccaagtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaaatctataacaaatctgc 45332456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 18800577 - 18800713
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    |||||||||||||| |||||| | |||| |  ||||||||||||||||||||||||||||||   | ||||||| || |||||||||||| |  ||||||    
T  18800577 tgtttcagccccctatatctccatgtttaccctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaacaaatctgca-cttaaaaat 18800675  T
Q  101 atgttttatttttatccgccagcgcaccatcgtgccac 138  Q
    ||||||   ||||  || | ||||||||||||||||||    
T  18800676 atgtttctgttttcgcctctagcgcaccatcgtgccac 18800713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42452763 - 42452702
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| |||||||    
T  42452763 tgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttataataaaagt 42452702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22163222 - 22163282
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||| |  |||||||| ||||||||||||||||||||    
T  22163222 tgtttcagccccctctatctcaaagtttacactgatacaatgtctatatttatagtaaaag 22163282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12342685 - 12342746
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || |||||||| || ||||||||||||||||||    
T  12342685 tgtttcagccccctctatctcaaggtttactctgatacaatgtgtatatttatagtaaaagt 12342746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37963202 - 37963263
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||| |||| || | |||||| |||||||||||||||||||||    
T  37963202 tgtttcagccccctctatctcaaggtttactcttatacaaagtctatatttatagtaaaagt 37963263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19007620 - 19007560
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| | ||||||||||||||||||    
T  19007620 tgtttcagccccctctatctcaaggtttactatgatacaaagcctatatttatagtaaaag 19007560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31733040 - 31733100
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || || ||||| ||||||||||||||||||||    
T  31733040 tgtttcagccccctctatctcaatgtttactctgttacaaagtctatatttatagtaaaag 31733100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 257
Target Start/End: Original strand, 6264546 - 6264655
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-atcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctg 245  Q
    ||||||||||||||||||||||||| |||| ||  |||||| |||| ||| ||| |||||||||||||| || |||||| || | |||||||| ||||||    
T  6264546 ccatcgtgccacgatttttccagtgacttg-cctcaaaactgaaacatccaatcatgccacgttgcccaaccatcgtgcaacaatttctgcag-aacctg 6264643  T
Q  246 attttaagttaa 257  Q
    ||||||||||||    
T  6264644 attttaagttaa 6264655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17849097 - 17849037
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  |||||||| || |||||||||||||||||    
T  17849097 tgtttcagccccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaag 17849037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28196617 - 28196557
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| || |||||||| |  |||||||||||||||||    
T  28196617 tgtttcagccccctctatctcaatgtttactctgatacaaagcatatatttatagtaaaag 28196557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 20147040 - 20147082
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  20147040 tctcaaggtttactttgatacaaggtctatatttatagtaaaa 20147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3022143 - 3022086
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaa 58  Q
    |||||||||| ||| |||||||| |||| || |||||||| |||||||||||||||||    
T  3022143 tgtttcagcctcctatatctcaaggtttactctgatacaaagtctatatttatagtaa 3022086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22874122 - 22874061
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| | ||||||| |||||||| | || ||||||||| ||||||    
T  22874122 tgtttcagccccctctatctccaggtttgctctgatacaaagcctgtatttatagcaaaagt 22874061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 35107268 - 35107191
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgca 90  Q
    ||||| ||||| |||| || |||||||| |||||||||||||||||||||    |||||||| || ||||||||||||    
T  35107268 ctctacctcaaggtttactatgatacaatgtctatatttatagtaaaagtatcccttaaaatttggaacaaatctgca 35107191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 5377725 - 5377769
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||    
T  5377725 tctcaaagtttgctctgaaacaaggtctatatttatagtgaaagt 5377769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11578379 - 11578439
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||| |||||||||||  ||| |  ||||| |||||||||||||||||||||||    
T  11578379 tgtttcagcccactctatctcaagatttaccctgatataaggtctatatttatagtaaaag 11578439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11739835 - 11739895
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||| |||||||||||||||||| |||| |  | |||||| ||||||||||||||||||||    
T  11739835 tgttccagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 11739895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14837253 - 14837193
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||| ||||||||||||| |||| |  |||||||| ||||||||||| ||||||||    
T  14837253 tgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaag 14837193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42923784 - 42923847
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||| ||||||||||  || |||| || |||| |||||||||||||||||||||||||    
T  42923784 tgtttcagcctcctctatctctcaaggtttactatgattcaaggtctatatttatagtaaaagt 42923847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15539750 - 15539809
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    ||||||| |||||| |||||||| |||| |  |||||||| |||||||||||||||||||    
T  15539750 tgtttcaaccccctatatctcaaggtttacactgatacaatgtctatatttatagtaaaa 15539809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 20146906 - 20146941
Alignment:
Q  25 gtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||| |||||||||||||||||||||||||||||||    
T  20146906 gtttactttgatacaaggtctatatttatagtaaaa 20146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 28462593 - 28462651
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcac 91  Q
    ||||||||||| ||||||||||||||||||    |||||||| || |||||||||||||    
T  28462593 tgatacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcac 28462651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 17897549 - 17897578
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  17897549 tgatacaaggtctatatttatagtaaaagt 17897578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 23452548 - 23452577
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  23452548 tgatacaaggtctatatttatagtaaaagt 23452577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Original strand, 35215903 - 35215932
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||||||||||||    
T  35215903 tgatacaaggtctatatttatagtaaaagt 35215932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 40699278 - 40699229
Alignment:
Q  13 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||| |||||| |||| || |||| |||||||||||||||||||||||||    
T  40699278 ctctctctcaaggtttactctgatgcaaggtctatatttatagtaaaagt 40699229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 20589609 - 20589581
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||||||||||||||||||||||    
T  20589609 tgatacaaggtctatatttatagtaaaag 20589581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34979854 - 34979906
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttat 53  Q
    ||||||||||||||||||||||| |||| |  | |||||| ||||||||||||    
T  34979854 tgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttat 34979906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44289343 - 44289403
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||| || ||||||||| |||| ||||||| ||||||||   ||||||||||||||||||    
T  44289343 tgttttagtcccctctatatcaaggtttgctatgatacaaaacctatatttatagtaaaag 44289403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 152; Significance: 3e-80; HSPs: 4)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 22109 - 21915
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22109 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 22011  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  22010 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 21915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 70 - 265
Target Start/End: Complemental strand, 24384 - 24190
Alignment:
Q  70 aaaatctgtaacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttcca 169  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24384 aaaaactgtaacaaatctgctcccaaaaa-tatgttttatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 24286  T
Q  170 gtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  24285 gtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 24190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 22206 - 22135
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22206 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 22135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 24481 - 24410
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 89  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24481 tctccaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 24410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 152; Significance: 3e-80; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 78 - 265
Target Start/End: Original strand, 12868 - 13054
Alignment:
Q  78 taacaaatctgcacccaaaaaatatgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttg 177  Q
    |||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12868 taacaaatctgctcccaaaaa-tacgttttatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttg 12966  T
Q  178 cccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||||||||||| |||||||    
T  12967 cccaaaaaactaaaacctccatcgtgccacgttgccttgacatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 13054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 2893 - 2629
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||   ||||||||| || |||||||||||||||| |||||    
T  2893 tgtttcagccccctctatctcaaagtttgctctgatacaagttctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccca-aaaat 2795  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcc-a 198  Q
    | |||| | || ||  | ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||  |||||| |||||||| |    
T  2794 acgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttg-cctcaaaactgaaacctccaa 2696  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcaca 265  Q
    ||||||||||||||| |||  ||||| ||| ||| |||||| | | |||||||||||||| |||||||    
T  2695 tcgtgccacgttgcctagcaatcgtgtcacaattcctgcag-atcttgattttaagttaactctcaca 2629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 15032 - 14768
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaat 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||| || |||||||||||||||| |||||    
T  15032 tgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccca-aaaat 14934  T
Q  101 atgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacct-cca 198  Q
    |||||| | || ||  | ||||||||||||||||| |||| || || |||||||||||||||  ||||||||| |||| ||  | |||| |||| | |||    
T  14933 atgtttctgttattcgctgccagcgcaccatcgtgtcacgttgtgatcccatcgtgccacgaaatttccagtgacttg-cctcataactgaaacttccca 14835  T
Q  199 tcgtgccacgttgcccagccgtcgtgccacgatt-ctgcagaaacctgattttaagttaattctcac 264  Q
    |||| |||||||||||  |  ||||||||||||| |||||||| |||||||||||||||| ||||||    
T  14834 tcgttccacgttgcccttcaatcgtgccacgattcctgcagaatcctgattttaagttaactctcac 14768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 103; Significance: 5e-51; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 69566 - 69825
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaa 96  Q
    |||||||||||||||||||||    |||||||||| ||||| ||||||||||||||| ||||||||   ||||||||| || |||||||||||||||  |    
T  69566 tgtttcagccccctctatctctctcaaagtttgctctgatataaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgcaccc--a 69663  T
Q  97 aaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacct 195  Q
    |||||||||| | |||||  | |||||| ||||||||||| |||||| || ||||| |||| |||||||||||||||| ||| ||  |||  | ||||||    
T  69664 aaatatgtttctgtttttcgctgccagcacaccatcgtgcaacgatgcgatcccattgtgctacgatttttccagtgctttg-cctcaaacttgaaacct 69762  T
Q  196 cc-atcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaa 257  Q
    || |||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  69763 ccaatcgtgccacgttgcctagccatcgtgccacgattctgcagaaatctgattttaagttaa 69825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 73298 - 73438
Alignment:
Q  1 tgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaa 96  Q
    |||||||||||||||||||||    ||||||| |||||||||| ||||||||||||||||||||||    |||||||| || |||||||||||||||  |    
T  73298 tgtttcagccccctctatctctctcaaagtttcctttgatacacggtctatatttatagtaaaagtatctcttaaaatttggaacaaatctgcaccc--a 73395  T
Q  97 aaatatgttt-tatttttatccgccagcgcaccatcgtgccac 138  Q
    |||||||||| | |||||  | |||||| ||||||||||||||    
T  73396 aaatatgtttctgtttttcgctgccagcacaccatcgtgccac 73438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 148 - 257
Target Start/End: Original strand, 73427 - 73536
Alignment:
Q  148 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctcca-tcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctga 246  Q
    |||||||||||| ||||||||||||| |||||  |||   | ||||||||| ||||||||||||||| |||| |||||||||||||||||| ||| ||||    
T  73427 ccatcgtgccacaatttttccagtgctttgcctcaaact-tgaaacctccaatcgtgccacgttgcctagccatcgtgccacgattctgcataaatctga 73525  T
Q  247 ttttaagttaa 257  Q
    |||||||||||    
T  73526 ttttaagttaa 73536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 91; Significance: 8e-44; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 33 - 174
Target Start/End: Complemental strand, 29142 - 29001
Alignment:
Q  33 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaaatatgttt-tatttttatccgccagcgcaccatc 131  Q
    ||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| |||||| ||||||| | |||||  | ||||||||||||||    
T  29142 tgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaa-tatgtttctgtttttcgctgccagcgcaccatc 29044  T
Q  132 gtgccacgatgagaccccatcgtgccacgatttttccagtgcc 174  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  29043 gtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 29001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 29005 - 28941
Alignment:
Q  201 gtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaattctcaca 265  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  29005 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 28941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 4010 - 3913
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgcacccaaaaa 98  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||||    
T  4010 tgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgcacccaaaaa 3913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1106 - 1167
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  1106 tgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 1167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41758 - 41819
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  41758 tgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaagt 41819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11748 - 11809
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||||||||||||||||||| | |||| || |||| |||||||||||||||||||||||||    
T  11748 tgtttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagt 11809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52024 - 51961
Alignment:
Q  1 tgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||||||||||  |||||||  | ||||||||||||||||||||||||||||||    
T  52024 tgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaagt 51961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 183915 - 183975
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||  ||||||||||||||| || |||||||||||||||||||||||| |||||    
T  183915 tgtttcagccct-tctatctcaaagtttactctgatacaaggtctatatttatagtgaaagt 183975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 4825 - 4773
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatag 55  Q
    |||||| |||||||||||||| |||| || |||||||||||||||||||||||    
T  4825 tttcagacccctctatctcaaggtttactctgatacaaggtctatatttatag 4773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 79198 - 79140
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaa 59  Q
    ||||| |||||||||||||||||  ||| || |||| ||||||||||||||||||||||    
T  79198 tgttttagccccctctatctcaagttttactctgattcaaggtctatatttatagtaaa 79140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 16924 - 16981
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaa 60  Q
    |||||||| |||||||||||| |||| || ||||||||||| |||||||||| |||||    
T  16924 tttcagcctcctctatctcaaggtttactctgatacaaggtttatatttatattaaaa 16981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 2032 - 1988
Alignment:
Q  18 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||    
T  2032 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 1988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 79872 - 79812
Alignment:
Q  1 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    ||||||||||||||||||||||| |||| |  ||||||||   ||||||||||||||||||    
T  79872 tgtttcagccccctctatctcaaggtttacactgatacaaaaactatatttatagtaaaag 79812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 16095 - 16154
Alignment:
Q  3 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 62  Q
    ||||| |||||||||||| || |||| || ||||||||  ||||||||||||||||||||    
T  16095 tttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagt 16154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 85231 - 85184
Alignment:
Q  14 tctatctcaaagtttgctttgatacaaggtctatatttatagtaaaag 61  Q
    |||||||||| |||| ||||||||||| | ||||||||||||||||||    
T  85231 tctatctcaaggtttactttgatacaaagcctatatttatagtaaaag 85184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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