View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8235_low_4 (Length: 283)
Name: NF8235_low_4
Description: NF8235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8235_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 68 - 266
Target Start/End: Complemental strand, 42227095 - 42226898
Alignment:
| Q |
68 |
cattagcttcctccctgaaccttccgccatatagtatctacataaattaattaacatgagtttatagtttcgatcaaaacaaagattttgtgttaagatt |
167 |
Q |
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| T |
42227095 |
cattagcttcctccctgaaccttccgccatatagtatctacataaattaattaacatgagtttatagtttcgatcaaaacaaagattttgtgttaagatt |
42226996 |
T |
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| Q |
168 |
tcgccacctttgataaatttgtcaggttatgtctcttgatccttgactgatgtgtatggacaaatatttgttcgaatacctctcgttatatgcgtgtgt |
266 |
Q |
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| T |
42226995 |
tcgccacctttgataaatttgtcaggttatgtctcttgatccttgactgatgtgtatggacaaatatttgttcgaatacctct-gttatatgcgtgtgt |
42226898 |
T |
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