View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8236_low_21 (Length: 235)

Name: NF8236_low_21
Description: NF8236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8236_low_21
NF8236_low_21
[»] chr8 (27 HSPs)
chr8 (41-191)||(35866769-35866919)
chr8 (47-163)||(28562583-28562699)
chr8 (47-162)||(28568080-28568195)
chr8 (47-162)||(28575673-28575788)
chr8 (43-163)||(27035153-27035273)
chr8 (47-156)||(26628822-26628931)
chr8 (43-165)||(36068238-36068360)
chr8 (43-163)||(3585609-3585729)
chr8 (43-163)||(11174222-11174342)
chr8 (43-163)||(11646324-11646444)
chr8 (43-162)||(7147071-7147190)
chr8 (43-162)||(40058303-40058422)
chr8 (43-162)||(40918731-40918850)
chr8 (43-163)||(30999523-30999643)
chr8 (43-163)||(43275398-43275518)
chr8 (43-163)||(2539929-2540049)
chr8 (47-151)||(27563878-27563982)
chr8 (43-162)||(37345729-37345848)
chr8 (47-162)||(45400770-45400885)
chr8 (43-145)||(20546310-20546412)
chr8 (47-133)||(13880984-13881070)
chr8 (47-149)||(10180881-10180983)
chr8 (72-127)||(37510457-37510512)
chr8 (57-133)||(167632-167708)
chr8 (74-133)||(13327788-13327847)
chr8 (53-110)||(33751233-33751289)
chr8 (57-133)||(11993902-11993978)
[»] chr5 (34 HSPs)
chr5 (47-162)||(734339-734454)
chr5 (43-162)||(25683229-25683348)
chr5 (55-156)||(39071052-39071153)
chr5 (43-163)||(37900622-37900742)
chr5 (53-164)||(10285056-10285167)
chr5 (43-166)||(30720488-30720611)
chr5 (43-162)||(40886610-40886729)
chr5 (47-155)||(11319718-11319826)
chr5 (43-163)||(12806852-12806972)
chr5 (48-163)||(1056624-1056737)
chr5 (43-162)||(36561099-36561218)
chr5 (47-128)||(11795317-11795398)
chr5 (43-164)||(23097722-23097843)
chr5 (41-160)||(16983413-16983532)
chr5 (43-163)||(25773807-25773927)
chr5 (48-133)||(16054274-16054359)
chr5 (48-133)||(30402991-30403076)
chr5 (53-162)||(26168076-26168185)
chr5 (54-162)||(1055773-1055885)
chr5 (47-119)||(21638931-21639003)
chr5 (59-125)||(15629310-15629376)
chr5 (53-109)||(11797714-11797770)
chr5 (124-164)||(39070881-39070921)
chr5 (74-133)||(42174263-42174322)
chr5 (43-133)||(12723097-12723187)
chr5 (43-133)||(12784580-12784670)
chr5 (117-163)||(21639770-21639816)
chr5 (48-133)||(31802780-31802864)
chr5 (57-133)||(1297890-1297966)
chr5 (57-133)||(4175632-4175708)
chr5 (48-120)||(4985318-4985390)
chr5 (47-115)||(7408340-7408408)
chr5 (57-133)||(9076062-9076138)
chr5 (57-133)||(42911541-42911617)
[»] chr3 (36 HSPs)
chr3 (47-162)||(18355868-18355983)
chr3 (47-151)||(54086714-54086818)
chr3 (54-165)||(6901730-6901840)
chr3 (43-162)||(13365001-13365120)
chr3 (43-162)||(46694110-46694229)
chr3 (55-165)||(29375302-29375412)
chr3 (53-165)||(19241665-19241777)
chr3 (43-163)||(36881438-36881558)
chr3 (43-163)||(23087930-23088050)
chr3 (43-162)||(3383234-3383353)
chr3 (54-153)||(24064389-24064488)
chr3 (77-164)||(26783661-26783748)
chr3 (43-162)||(32834989-32835108)
chr3 (48-151)||(48436387-48436490)
chr3 (53-163)||(48820508-48820618)
chr3 (43-164)||(13703370-13703491)
chr3 (43-162)||(199013-199132)
chr3 (47-133)||(52805057-52805142)
chr3 (47-125)||(53559648-53559726)
chr3 (43-145)||(43750294-43750396)
chr3 (56-127)||(1455186-1455257)
chr3 (54-157)||(19896935-19897038)
chr3 (72-121)||(37293595-37293644)
chr3 (54-155)||(52009051-52009158)
chr3 (68-134)||(31873891-31873957)
chr3 (54-156)||(48963288-48963390)
chr3 (48-133)||(48151994-48152079)
chr3 (48-133)||(48214076-48214161)
chr3 (69-133)||(17755357-17755421)
chr3 (69-133)||(19056677-19056741)
chr3 (43-101)||(37781094-37781152)
chr3 (124-165)||(13364840-13364881)
chr3 (48-133)||(32980649-32980734)
chr3 (43-103)||(2154186-2154246)
chr3 (57-133)||(34266599-34266675)
chr3 (43-103)||(43159907-43159967)
[»] chr2 (33 HSPs)
chr2 (48-162)||(40756911-40757025)
chr2 (43-165)||(22388135-22388257)
chr2 (54-133)||(19976497-19976576)
chr2 (47-156)||(37284525-37284632)
chr2 (43-163)||(23366947-23367067)
chr2 (43-163)||(28110094-28110214)
chr2 (56-163)||(32838928-32839035)
chr2 (43-163)||(3519065-3519185)
chr2 (47-159)||(36447420-36447532)
chr2 (43-162)||(12969740-12969859)
chr2 (47-162)||(39561895-39562005)
chr2 (43-163)||(1102659-1102779)
chr2 (43-163)||(39938328-39938448)
chr2 (43-162)||(37673743-37673862)
chr2 (43-162)||(1646445-1646564)
chr2 (74-133)||(14779964-14780023)
chr2 (54-128)||(34242143-34242217)
chr2 (62-133)||(1002760-1002831)
chr2 (57-155)||(4917933-4918031)
chr2 (47-121)||(27900991-27901065)
chr2 (57-133)||(479131-479207)
chr2 (57-133)||(15677449-15677525)
chr2 (53-101)||(28401396-28401444)
chr2 (74-133)||(14541340-14541399)
chr2 (48-133)||(13753964-13754049)
chr2 (57-133)||(36375580-36375656)
chr2 (48-89)||(36917009-36917050)
chr2 (57-133)||(10812208-10812284)
chr2 (57-133)||(11560205-11560281)
chr2 (49-89)||(32901136-32901176)
chr2 (57-133)||(34357187-34357263)
chr2 (43-103)||(43077331-43077391)
chr2 (57-133)||(44360443-44360519)
[»] chr4 (38 HSPs)
chr4 (47-162)||(19692884-19692999)
chr4 (47-162)||(19703469-19703584)
chr4 (48-155)||(6128956-6129063)
chr4 (43-163)||(22321267-22321387)
chr4 (43-165)||(21310579-21310701)
chr4 (48-166)||(32543642-32543760)
chr4 (43-163)||(14261202-14261322)
chr4 (43-163)||(24706246-24706366)
chr4 (43-163)||(25704809-25704929)
chr4 (43-162)||(12071718-12071837)
chr4 (43-162)||(40122487-40122606)
chr4 (67-162)||(50839031-50839126)
chr4 (43-161)||(21064919-21065037)
chr4 (43-163)||(20249013-20249133)
chr4 (43-163)||(44568995-44569115)
chr4 (43-152)||(50768020-50768129)
chr4 (43-165)||(21661532-21661654)
chr4 (43-165)||(21670296-21670418)
chr4 (47-152)||(18507276-18507381)
chr4 (47-133)||(48652386-48652472)
chr4 (54-145)||(31892401-31892492)
chr4 (52-123)||(51777771-51777841)
chr4 (48-97)||(26676645-26676694)
chr4 (48-134)||(8735400-8735486)
chr4 (88-155)||(26676577-26676645)
chr4 (57-133)||(39683870-39683946)
chr4 (48-120)||(42629342-42629414)
chr4 (57-133)||(53599942-53600018)
chr4 (57-133)||(56576259-56576335)
chr4 (69-160)||(20714322-20714413)
chr4 (48-85)||(20714426-20714463)
chr4 (57-133)||(3436223-3436299)
chr4 (63-103)||(26906551-26906591)
chr4 (57-133)||(38542432-38542508)
chr4 (57-109)||(38617852-38617904)
chr4 (57-133)||(42513182-42513258)
chr4 (57-133)||(44069043-44069119)
chr4 (57-129)||(50623430-50623502)
[»] chr6 (22 HSPs)
chr6 (43-165)||(17942601-17942723)
chr6 (43-163)||(15064694-15064814)
chr6 (43-164)||(8235783-8235904)
chr6 (43-163)||(8626640-8626760)
chr6 (43-163)||(13757365-13757485)
chr6 (43-162)||(29260350-29260469)
chr6 (43-163)||(1605736-1605856)
chr6 (43-162)||(7761458-7761577)
chr6 (47-165)||(20398235-20398353)
chr6 (43-162)||(4129585-4129703)
chr6 (54-165)||(1814762-1814873)
chr6 (47-125)||(3798261-3798339)
chr6 (53-152)||(26860932-26861031)
chr6 (43-162)||(31559738-31559857)
chr6 (43-162)||(30734483-30734602)
chr6 (43-109)||(847829-847895)
chr6 (43-103)||(31244891-31244951)
chr6 (74-133)||(30236987-30237046)
chr6 (48-133)||(3849074-3849159)
chr6 (47-88)||(14287149-14287190)
chr6 (70-159)||(24120645-24120734)
chr6 (57-133)||(22050058-22050134)
[»] chr1 (34 HSPs)
chr1 (47-155)||(24876723-24876831)
chr1 (43-165)||(23526397-23526519)
chr1 (43-163)||(284491-284611)
chr1 (47-163)||(51064753-51064869)
chr1 (43-162)||(34458724-34458843)
chr1 (43-163)||(40783656-40783776)
chr1 (43-154)||(40261293-40261404)
chr1 (43-162)||(321784-321903)
chr1 (43-162)||(23045279-23045398)
chr1 (47-162)||(31003787-31003902)
chr1 (43-162)||(47037852-47037971)
chr1 (43-157)||(46771796-46771910)
chr1 (55-162)||(18396864-18396971)
chr1 (54-163)||(24771905-24772014)
chr1 (53-163)||(1837826-1837937)
chr1 (47-157)||(14925626-14925734)
chr1 (48-155)||(25929261-25929368)
chr1 (54-125)||(40052501-40052572)
chr1 (48-165)||(23166848-23166965)
chr1 (47-162)||(27143014-27143127)
chr1 (43-155)||(31061463-31061578)
chr1 (43-163)||(33082902-33083022)
chr1 (43-156)||(27210961-27211074)
chr1 (68-155)||(40562293-40562380)
chr1 (71-126)||(14350510-14350565)
chr1 (47-93)||(3657236-3657282)
chr1 (68-126)||(1749457-1749515)
chr1 (48-133)||(19455542-19455626)
chr1 (48-133)||(32347987-32348072)
chr1 (69-133)||(19093277-19093341)
chr1 (55-125)||(17581069-17581139)
chr1 (48-133)||(5597832-5597917)
chr1 (57-133)||(35531447-35531523)
chr1 (43-103)||(51613450-51613510)
[»] chr7 (21 HSPs)
chr7 (43-165)||(27813969-27814091)
chr7 (43-163)||(47110608-47110728)
chr7 (43-163)||(36453123-36453243)
chr7 (47-162)||(16662255-16662370)
chr7 (47-162)||(17636615-17636730)
chr7 (43-163)||(25614352-25614472)
chr7 (43-162)||(10981666-10981785)
chr7 (43-164)||(40349120-40349240)
chr7 (43-127)||(3091671-3091755)
chr7 (47-133)||(27941013-27941099)
chr7 (57-163)||(16360549-16360654)
chr7 (53-133)||(24456794-24456874)
chr7 (43-104)||(3498813-3498874)
chr7 (51-133)||(7743427-7743509)
chr7 (47-159)||(8380100-8380210)
chr7 (48-133)||(35112438-35112523)
chr7 (57-133)||(31399089-31399165)
chr7 (54-120)||(37983300-37983366)
chr7 (57-133)||(33257890-33257966)
chr7 (73-127)||(28200488-28200542)
chr7 (53-89)||(6737258-6737294)
[»] scaffold0939 (1 HSPs)
scaffold0939 (54-132)||(1110-1188)
[»] scaffold0168 (1 HSPs)
scaffold0168 (47-163)||(7830-7946)
[»] scaffold1770 (1 HSPs)
scaffold1770 (43-162)||(320-438)
[»] scaffold0054 (1 HSPs)
scaffold0054 (54-162)||(45622-45730)
[»] scaffold0025 (1 HSPs)
scaffold0025 (48-128)||(65199-65279)
[»] scaffold0343 (1 HSPs)
scaffold0343 (47-152)||(6911-7015)
[»] scaffold0076 (1 HSPs)
scaffold0076 (47-163)||(15322-15438)
[»] scaffold0056 (1 HSPs)
scaffold0056 (47-152)||(71245-71350)
[»] scaffold0062 (1 HSPs)
scaffold0062 (54-134)||(295-375)
[»] scaffold0060 (1 HSPs)
scaffold0060 (47-163)||(10904-11025)
[»] scaffold0001 (1 HSPs)
scaffold0001 (48-109)||(419639-419700)
[»] scaffold0172 (1 HSPs)
scaffold0172 (57-133)||(26283-26359)
[»] scaffold0129 (1 HSPs)
scaffold0129 (111-163)||(19007-19059)
[»] scaffold0009 (1 HSPs)
scaffold0009 (43-103)||(147270-147330)


Alignment Details
Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 41 - 191
Target Start/End: Original strand, 35866769 - 35866919
Alignment:
Q  41 agatatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaa 140  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35866769 agatatgtaagagtattattgataaaccaataattaatgttgaattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaatagacaa 35866868  T
Q  141 gtattgtgaaacggagggagtatattatgagctgctaaataagaagttaat 191  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  35866869 gtattgtgaaacggatggagtatattatgagctgccaaataagaagttaat 35866919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 28562583 - 28562699
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  | ||||||||    
T  28562583 gtaagagtaatattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaataattcttcaaaatggataagtattg 28562682  T
Q  147 tgaaacggagggagtat 163  Q
    ||| |||||||||||||    
T  28562683 tgagacggagggagtat 28562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 28568080 - 28568195
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  28568080 gtaagggtaatattgataaaccaataattaatgttgcattgaaacttcaaagtgacaagtaaaatgaaacaaaataattctccaaaatggacaagtattg 28568179  T
Q  147 tgaaacggagggagta 162  Q
    ||||| ||||||||||    
T  28568180 tgaaatggagggagta 28568195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 28575673 - 28575788
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  28575673 gtaagggtaatattgataaaccaataattaatgttgcattgaaacttcaaagtgacaagtaaaatgaaacaaaataattctccaaaatggacaagtattg 28575772  T
Q  147 tgaaacggagggagta 162  Q
    ||||| ||||||||||    
T  28575773 tgaaatggagggagta 28575788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 27035153 - 27035273
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||    
T  27035153 atatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctccaaaatgaacaagt 27035252  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| ||||||||||| |||||    
T  27035253 attatgaaacggaggcagtat 27035273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 26628931 - 26628822
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||  |||| ||||||    
T  26628931 gtaagggtattattgataaatcaataattaatgttgcattgaaacttgaaaatgacaaataaagtgaaacaaaattattctccaaaagcaacatgtattg 26628832  T
Q  147 tgaaacggag 156  Q
    ||||||||||    
T  26628831 tgaaacggag 26628822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 165
Target Start/End: Original strand, 36068238 - 36068360
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  36068238 atatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagt 36068337  T
Q  143 attgtgaaacggagggagtatat 165  Q
    ||| |||||||||||||||||||    
T  36068338 attatgaaacggagggagtatat 36068360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 3585609 - 3585729
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||| ||||||    
T  3585609 atatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatagacaagt 3585708  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| ||||||||| |||||||    
T  3585709 attatgaaacggatggagtat 3585729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 11174342 - 11174222
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||  ||||| |||||||    
T  11174342 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatgaacaagt 11174243  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  11174242 attatgaaacggagggagtat 11174222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 11646444 - 11646324
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  11646444 atatgcaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagt 11646345  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  11646344 attatgaaacggagggagtat 11646324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 7147071 - 7147190
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  7147071 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 7147170  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  7147171 attatgaaacggagggagta 7147190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 40058422 - 40058303
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  40058422 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 40058323  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  40058322 attatgaaacggagggagta 40058303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 40918850 - 40918731
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  40918850 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 40918751  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  40918750 attatgaaacggagggagta 40918731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 30999643 - 30999523
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||| |||||  ||||||    
T  30999643 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtaacaagtattgtgaaacaaaattattctctaaaatggacaagt 30999544  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  30999543 attatgaaacggagggagtat 30999523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 43275518 - 43275398
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||   |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  43275518 atatgcaagggtattattgacaagataataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 43275419  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  43275418 attatgaaacggagggagtat 43275398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 2540049 - 2539929
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||  |||||  ||||||    
T  2540049 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatggacaagt 2539950  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| ||||||||| |||||||    
T  2539949 attatgaaacggaaggagtat 2539929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 27563982 - 27563878
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||   |||||||| |    
T  27563982 gtaagggtattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagtaatatgaaacaaaattgttctccaaaagcgacaagtatcg 27563883  T
Q  147 tgaaa 151  Q
    |||||    
T  27563882 tgaaa 27563878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 37345729 - 37345848
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||||||||| |||||||||   |||||||||||||||||| |||||  ||||||    
T  37345729 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaaatgacaagtattgtgaaacaaaattattctctaaaatggacaagt 37345828  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||| ||||||    
T  37345829 attatgaaacggaaggagta 37345848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 45400885 - 45400770
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    |||||| |||||||||||||  |||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||||||||   ||  |||||     
T  45400885 gtaagaatattattgataaattaataattaatgttgcattgaaatttaaaagtgacaaataaagtgaaacaaaattattctccaaaaacgacttgtatta 45400786  T
Q  147 tgaaacggagggagta 162  Q
    ||||||||||||||||    
T  45400785 tgaaacggagggagta 45400770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 20546412 - 20546310
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||| ||  |||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||| ||||||  ||||||    
T  20546412 atatgtaagggtattattgacaagacaataattaatgttgcattgaaacctgaaagtgacaagtattgtgaaacaaaattattcttcaaaatggacaagt 20546313  T
Q  143 att 145  Q
    |||    
T  20546312 att 20546310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 13881070 - 13880984
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||| ||||||| | ||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  13881070 gtaagattattattaacaaatcaataattaatattgcattgaaacttgaaagtgacaagtaatttgaaacaaaattattcaccaaaa 13880984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 10180983 - 10180881
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||||||| |||   |||| ||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||   | ||||||||    
T  10180983 gtaagggtattattgacaaattcataactaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattgttctccaaaagtgataagtattg 10180884  T
Q  147 tga 149  Q
    |||    
T  10180883 tga 10180881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 37510457 - 37510512
Alignment:
Q  72 aattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattct 127  Q
    ||||||| || ||||||||||| ||||||| |||||||||||||||||||||||||    
T  37510457 aattaattttacattgaaacttaaaagtgataagtaaaatgaaacaaaattattct 37510512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 167632 - 167708
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  |||| | |||||||||| ||||||||||    
T  167632 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaattaaaacaaaatttttctccaaaa 167708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 13327847 - 13327788
Alignment:
Q  74 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||||||||||||||  ||||||||||||  ||||  ||||||||||| ||||||||||    
T  13327847 ttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaatttttctccaaaa 13327788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 33751289 - 33751233
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaa 110  Q
    |||||||||||||| ||||||||||| ||||||||||  |||||| ||| ||||||||    
T  33751289 gtattattgataaaacaataattaatattgcattgaactttgaaaatga-aagtaaaa 33751233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 11993978 - 11993902
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||| ||  ||||||||||||  ||||  ||||||||||| ||||||||||    
T  11993978 tattggtaaaacaacatttaatgttgcattaaactttgaaagtgacagttaaatagaaacaaaatttttctccaaaa 11993902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 3e-47; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 734454 - 734339
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  734454 gtaagagtattattgataaaccaataattaatgttgtattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctccaaaatggacaagtattg 734355  T
Q  147 tgaaacggagggagta 162  Q
    |||||||| |||||||    
T  734354 tgaaacggtgggagta 734339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 25683348 - 25683229
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||  ||||||    
T  25683348 atatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagttttatgaaacaaaattattctccaaaatggacaagt 25683249  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  25683248 attatgaaacggagggagta 25683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 39071052 - 39071153
Alignment:
Q  55 attattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgg 154  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||||||| |||    
T  39071052 attattgataaaccaataattaatgttgcattgatacttaaaagtgacaagtaaagtgaaacaaaattattctcaaaaatagacaagtattgtgaatcgg 39071151  T
Q  155 ag 156  Q
    ||    
T  39071152 ag 39071153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 37900742 - 37900622
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||| ||||||    
T  37900742 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtatcgtgaaacaaaattattcttcaaaatagacaagt 37900643  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| ||||||||| |||||||    
T  37900642 attatgaaacggaaggagtat 37900622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 10285167 - 10285056
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaac 152  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||  |||||| ||||||||| ||||||    
T  10285167 gtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatagacaagtattatgaaac 10285068  T
Q  153 ggagggagtata 164  Q
    ||||||||||||    
T  10285067 ggagggagtata 10285056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 30720611 - 30720488
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  |||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  30720611 atatgcaagggtattattgacaagacaataactaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 30720512  T
Q  143 attgtgaaacggagggagtatatt 166  Q
    ||| ||||||||||||||||||||    
T  30720511 attatgaaacggagggagtatatt 30720488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 40886729 - 40886610
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  40886729 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 40886630  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  40886629 attatgaaacggagggagta 40886610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 11319718 - 11319826
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    |||||||||||||| ||||||||||||||||| ||||||| |||| ||||||||| || |||| |||||||||||||||||| |||||| |||||||||     
T  11319718 gtaagagtattattaataaaccaataattaatattgcattaaaacctgaaagtgataaataaagtgaaacaaaattattctctaaaatagacaagtatta 11319817  T
Q  147 tgaaacgga 155  Q
    |||||||||    
T  11319818 tgaaacgga 11319826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 12806972 - 12806852
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  12806972 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagagacaagtattgtgaaacaaaattattctctaaaatggacaagt 12806873  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  12806872 attatgaaacggagggagtat 12806852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 1056737 - 1056624
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 147  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||  ||| || ||||| |||||||||||||||||   |||||||||||    
T  1056737 taagagtattattgacaaactaataattaatgttgcattgaaacttgaaagtga-tagt-aattgaaataaaattattctccaaaagtgacaagtattgt 1056640  T
Q  148 gaaacggagggagtat 163  Q
    ||||||||||||||||    
T  1056639 gaaacggagggagtat 1056624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 36561218 - 36561099
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  36561218 atatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 36561119  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  36561118 attatgaaacggagggagta 36561099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 11795398 - 11795317
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctc 128  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  11795398 gtaagagtattattgataaacctataattaatgttgcattgaaacttgaaagtgataaataaagtgaaacaaaattattctc 11795317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 23097843 - 23097722
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||| ||  ||||||||||| |||||||||||| ||||||| |||||||   ||||||||||||||||||||||||  ||||||    
T  23097843 atatgtaagggtattattgacaagacaataattaatattgcattgaaacatgaaagtaacaagtattgtgaaacaaaattattctccaaaatggacaagt 23097744  T
Q  143 attgtgaaacggagggagtata 164  Q
    ||| ||||||||| ||||||||    
T  23097743 attatgaaacggaaggagtata 23097722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 16983413 - 16983532
Alignment:
Q  41 agatatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaa 140  Q
    ||||||| ||| |||||||||| ||  |||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||| ||||||| ||||    
T  16983413 agatatgcaagggtattattgaaaagacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaacaaaattattcttcaaaatagacaa 16983512  T
Q  141 gtattgtgaaacggagggag 160  Q
    ||||| | |||| |||||||    
T  16983513 gtattataaaacagagggag 16983532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 25773807 - 25773927
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||||||||||||| |||||   ||||||||| |||||||| |||||  ||||||    
T  25773807 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgataagtattgtgaaacaaacttattctctaaaatggacaagt 25773906  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||| ||||||    
T  25773907 attatgaaacggagagagtat 25773927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 16054274 - 16054359
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||    
T  16054274 taagggtattattgacaaactaataattaatgttgcattgaaacttgaaagtgacaaccaaagtgaaccaaaattattctccaaaa 16054359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 30403076 - 30402991
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| |||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  30403076 taagggtattattgacaaaccaataattaattttgtattgaaacttaaaagtgacaagtaaaatgaaataaaattattctctaaaa 30402991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 162
Target Start/End: Original strand, 26168076 - 26168185
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaac 152  Q
    |||||||| | |||| ||| |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||   ||| |||| |||||||    
T  26168076 gtattattaacaaacaaatcattaatcttgcattgaaacttgaaagtgacaattaaagtgaaacaaaattattctctaaaaacgacatgtatcgtgaaac 26168175  T
Q  153 ggagggagta 162  Q
    ||| ||||||    
T  26168176 ggaaggagta 26168185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 1055885 - 1055773
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaag----tgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtga 149  Q
    ||||||| | ||||||||| |||||||||||||||||||||| ||     |||||||||| |||| |||| |||||||||||||   |||| ||||| ||    
T  1055885 tattattaacaaaccaatatttaatgttgcattgaaacttgagagagacagacaagtaaagtgaagcaaatttattctccaaaaacgacaaatattggga 1055786  T
Q  150 aacggagggagta 162  Q
    |||||| ||||||    
T  1055785 aacggaaggagta 1055773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 21638931 - 21639003
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaa 119  Q
    ||||||| |||||||| ||||||||| ||||||||||||| |||||| || ||||||||| || || ||||||    
T  21638931 gtaagagaattattgacaaaccaatatttaatgttgcatttaaacttaaatgtgacaagtcaagtggaacaaa 21639003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 15629310 - 15629376
Alignment:
Q  59 ttgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 125  Q
    ||||||||  ||||||||||| |||||||||| || ||| | ||||||||| |||||||||||||||    
T  15629310 ttgataaattaataattaatgctgcattgaaatttaaaaataacaagtaaagtgaaacaaaattatt 15629376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 11797714 - 11797770
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaa 109  Q
    |||| ||||| |||| |||||||||||||| ||||||| |||||| |||||||||||    
T  11797714 gtatcattgacaaactaataattaatgttgtattgaaatttgaaaatgacaagtaaa 11797770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 39070921 - 39070881
Alignment:
Q  124 ttctccaaaataaacaagtattgtgaaacggagggagtata 164  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  39070921 ttcttcaaaatgaacaagtattgtgaaacggagggagtata 39070881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 42174322 - 42174263
Alignment:
Q  74 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||||||||||  | ||||||||| ||||| ||||||||||||||||| |||||    
T  42174322 ttaatattgcattgaaatataaaagtgacaggtaaattgaaacaaaattattcttcaaaa 42174263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 12723097 - 12723187
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| |||| ||| ||||| |||| ||| ||||| ||||||||||||  || |||||||||| ||||  | ||||||||| ||||||||||    
T  12723097 atatataagggtaatattggtaaaacaacaattagtgttgcattgaactttaaaagtgacaattaaataggaacaaaatttttctccaaaa 12723187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 12784580 - 12784670
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| |||| ||| ||||| |||| ||| ||||| ||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  12784580 atatataagggtaatattggtaaaacaacaattagtgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 12784670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 21639770 - 21639816
Alignment:
Q  117 aaaattattctccaaaataaacaagtattgtgaaacggagggagtat 163  Q
    |||||||||||||||||  |||||||||||||||| |||||| ||||    
T  21639770 aaaattattctccaaaagcaacaagtattgtgaaatggagggggtat 21639816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 31802864 - 31802780
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| ||| ||||| |||| ||| | ||||||||||||||||  |||||| |||||  |||| |||||||||||| ||||||||||    
T  31802864 taagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaaatgacagttaaattgaaacaaaatt-ttctccaaaa 31802780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 1297890 - 1297966
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||||| ||||||||||||||||  ||||||||||||  ||||  | ||||||| | ||||||||||    
T  1297890 tattggtaaaacaatatttaatgttgcattgaattttgaaagtgacagttaaataggaacaaaaattttctccaaaa 1297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 4175632 - 4175708
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||| | ||||||||||    
T  4175632 tattgataaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaa 4175708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 4985318 - 4985390
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaa 120  Q
    |||| ||| |||||||||| || || ||||||||||||||||  ||||||||||||  ||||  |||||||||    
T  4985318 taagggtaatattgataaaacattatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaa 4985390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 7408408 - 7408340
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaa 115  Q
    ||||||||| ||||| |||| ||||| ||||| |||| |||||  ||||||||||||| |||| |||||    
T  7408408 gtaagagtaatattggtaaaacaatatttaatattgctttgaactttgaaagtgacaattaaattgaaa 7408340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 9076138 - 9076062
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| || |||||||    
T  9076138 tattgataaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttatccaaaa 9076062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 42911617 - 42911541
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||||| ||||||||||||||||  ||||||||||||  ||||  | ||||||| | ||||||||||    
T  42911617 tattggtaaaacaatatttaatgttgcattgaactttgaaagtgacagttaaatagtaacaaaaattttctccaaaa 42911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 18355983 - 18355868
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  18355983 gtaagggtattattgataaatcaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattcttcaaaatggacaagtattg 18355884  T
Q  147 tgaaacggagggagta 162  Q
    ||||||||||||||||    
T  18355883 tgaaacggagggagta 18355868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 54086714 - 54086818
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||||||    
T  54086714 gtaagggtattattgataaatcaataattaatgttgtattgaaacttgaaagtgacaaataaaatgaaacaaaagtattctccaaaatggacaagtattg 54086813  T
Q  147 tgaaa 151  Q
    |||||    
T  54086814 tgaaa 54086818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 6901730 - 6901840
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 153  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  |||| ||||||||||||    
T  6901730 tattattgataaatcaatgattaatgttgcattgaaacttaaaagtgacaagtaaagtgaaacaaaattattctccaaaatggacaa-tattgtgaaacg 6901828  T
Q  154 gagggagtatat 165  Q
    ||| || |||||    
T  6901829 gagcgactatat 6901840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 13365001 - 13365120
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  13365001 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagt 13365100  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  13365101 attatgaaacggagggagta 13365120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 46694229 - 46694110
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  46694229 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 46694130  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  46694129 attatgaaacggagggagta 46694110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 29375302 - 29375412
Alignment:
Q  55 attattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgg 154  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||||| ||||||||    
T  29375302 attattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacgg 29375401  T
Q  155 agggagtatat 165  Q
    |||||||||||    
T  29375402 agggagtatat 29375412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 19241777 - 19241665
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaac 152  Q
    |||||||||| ||  |||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||| |||||  ||||||||| ||||||    
T  19241777 gtattattgacaagtcaataattaatgttgcattgaaacttaaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagtattatgaaac 19241678  T
Q  153 ggagggagtatat 165  Q
    |||||||||||||    
T  19241677 ggagggagtatat 19241665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 36881438 - 36881558
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  36881438 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 36881537  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  36881538 attatgaaacggagggagtat 36881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 23088050 - 23087930
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||  |||||  ||||||    
T  23088050 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctttaaaatcgacaagt 23087951  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| ||||||||||| |||||    
T  23087950 attatgaaacggaggaagtat 23087930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 3383234 - 3383353
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  3383234 atatgcaagagtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 3383333  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| | ||||| | ||||||    
T  3383334 attataaaacgaaaggagta 3383353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 24064389 - 24064488
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 153  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||| ||||| ||||| |||||||||||||||||   ||| |||||||||||||    
T  24064389 tattattgataaaccaataattaatgttacattaaaacttgaaagtgacatgtaaagtgaaataaaattattctccaaaaacgacatgtattgtgaaacg 24064488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 26783661 - 26783748
Alignment:
Q  77 atgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacggagggagtata 164  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||| ||||||||||| ||||||||| ||||||    
T  26783661 atgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctttaaaatagacaagtattgtaaaacggaggaagtata 26783748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 32835108 - 32834989
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    |||| |||| |||||||||| ||| ||||| |||||||||||||||||||||||| |||||||||  ||||||| ||||||||||| | |||  ||||||    
T  32835108 atatttaagggtattattgacaaaacaatacttaatgttgcattgaaacttgaaaatgacaagtactatgaaacgaaattattctctacaatggacaagt 32835009  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  32835008 attatgaaacggagggagta 32834989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 48436387 - 48436490
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 147  Q
    |||| |||||||||| || | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||   |||| ||||||    
T  48436387 taagtgtattattgacaagctaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattctccaaaagtgacaaatattgt 48436486  T
Q  148 gaaa 151  Q
    ||||    
T  48436487 gaaa 48436490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 48820508 - 48820618
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaac 152  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |  |||||  ||||||||| ||||||    
T  48820508 gtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttttaaaatggacaagtattatgaaac 48820607  T
Q  153 ggagggagtat 163  Q
    ||||| |||||    
T  48820608 ggaggaagtat 48820618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 13703370 - 13703491
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   | ||||||| ||||||| || |||  ||||||    
T  13703370 atatgcaagggtattattgacaacacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaatttattcttcagaatggacaagt 13703469  T
Q  143 attgtgaaacggagggagtata 164  Q
    ||| ||||||||| ||||||||    
T  13703470 attatgaaacggatggagtata 13703491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 199013 - 199132
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||   ||||||||||||||| || |||||  |||| |    
T  199013 atatgcaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaaatgacaaatattgtgaaacaaaattattttctaaaatggacaact 199112  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||| ||||||||||    
T  199113 attatgaaatggagggagta 199132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 52805142 - 52805057
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| || ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  52805142 gtaagggtgttattgataaatcaataataaatgttgcatcgaaacttgaaagtgacaagtaaaataaaac-aaattattctccaaaa 52805057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 53559726 - 53559648
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 125  Q
    |||| ||||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  53559726 gtaacagtattattaataaatcaatgattaatgttgcattgaaacttgagagtgacaagtaaattgaaacaaaattatt 53559648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 145
Target Start/End: Original strand, 43750294 - 43750396
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||    ||||| ||||||||||  |||||  ||||||    
T  43750294 atatgcaagagtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgagaaaccaaattattctaaaaaatggacaagt 43750393  T
Q  143 att 145  Q
    |||    
T  43750394 att 43750396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 1455257 - 1455186
Alignment:
Q  56 ttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattct 127  Q
    ||||||| ||||||||||||||||||||||||||| | |||||||||||||||| | ||||||| |||||||    
T  1455257 ttattgacaaaccaataattaatgttgcattgaaattggaaagtgacaagtaaagtaaaacaaatttattct 1455186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 19897038 - 19896935
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 153  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||  | |||| || | ||||||||||||| | |||||  |||| |||| ||||||||    
T  19897038 tattattgataaaccaataattaatgttgtattaaaacttgaaagaaagaagtgaagtaaaacaaaattatttttcaaaagcaacatgtatggtgaaacg 19896939  T
Q  154 gagg 157  Q
    ||||    
T  19896938 gagg 19896935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 37293595 - 37293644
Alignment:
Q  72 aattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaat 121  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37293595 aattaatgttgcattgaaacttgaaagggacaagtaaaatgaaacaaaat 37293644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 52009158 - 52009051
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatg------aaacaaaattattctccaaaataaacaagtattgt 147  Q
    ||||||||| ||  |||||||||||||||||| |||||||||||||||||||||| |||      |||||||||||||  ||||||   |||||||||||    
T  52009158 tattattgacaagacaataattaatgttgcatcgaaacttgaaagtgacaagtaatatgattattaaacaaaattatttcccaaaagcgacaagtattgt 52009059  T
Q  148 gaaacgga 155  Q
    ||||||||    
T  52009058 gaaacgga 52009051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 31873957 - 31873891
Alignment:
Q  68 caataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaat 134  Q
    ||||||||||||||||||||||||||||||| ||||||||   ||||| |||||||||||| |||||    
T  31873957 caataattaatgttgcattgaaacttgaaagggacaagtattgtgaaataaaattattctctaaaat 31873891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 48963288 - 48963390
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 153  Q
    ||||||||| ||  |||||||||||||||||||||||||| ||| ||| || ||  |||||| |||||||||||| |||||| | ||||| | |||| ||    
T  48963288 tattattgacaagacaataattaatgttgcattgaaacttaaaaatgataaatattatgaaataaaattattctctaaaatagataagtaatatgaatcg 48963387  T
Q  154 gag 156  Q
    |||    
T  48963388 gag 48963390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 48152079 - 48151994
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| ||| ||||| |||| ||| | ||||||||||||||||  ||||||||||||  |||| ||||||||| || ||||||||||    
T  48152079 taagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaattgaaacaaattttttctccaaaa 48151994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 48214161 - 48214076
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| ||| ||||| |||| ||| | ||||||||||||||||  ||||||||||||  |||| ||||||||| || ||||||||||    
T  48214161 taagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaattgaaacaaattttttctccaaaa 48214076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 17755357 - 17755421
Alignment:
Q  69 aataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||| | ||||||||||||||  || | ||||||||||| ||| |||||||||||||||||    
T  17755357 aataattattattgcattgaaactttgaaataacaagtaaaataaaataaaattattctccaaaa 17755421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 19056677 - 19056741
Alignment:
Q  69 aataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||| | ||||||||||||||  || | ||||||||||| ||| |||||||||||||||||    
T  19056677 aataattattattgcattgaaactttgaaataacaagtaaaataaaataaaattattctccaaaa 19056741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 37781094 - 37781152
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtga 101  Q
    |||| |||| |||||||||| ||||||||||||||  ||| ||||||| ||||||||||    
T  37781094 atatttaagggtattattgacaaaccaataattaactttggattgaaatttgaaagtga 37781152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 13364881 - 13364840
Alignment:
Q  124 ttctccaaaataaacaagtattgtgaaacggagggagtatat 165  Q
    ||||||||||| |||| ||||| |||||||||||||||||||    
T  13364881 ttctccaaaatgaacatgtattttgaaacggagggagtatat 13364840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 32980734 - 32980649
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| ||| |||||||||| || || ||||||||| ||||||  ||||||||||||  ||||  |||||||||  |||||||||||    
T  32980734 taagggtaatattgataaaacattatttaatgttgtattgaattttgaaagtgacagttaaatagaaacaaaaaaattctccaaaa 32980649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 2154186 - 2154246
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 103  Q
    |||| |||||||| |||||||||  ||| | ||||||||||||||||  ||||||||||||    
T  2154186 atatctaagagtaatattgataagacaacatttaatgttgcattgaactttgaaagtgaca 2154246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 34266599 - 34266675
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||||| ||| | ||||||||||||||||  |||||| |||||  ||||  ||||||||| | ||||||||||    
T  34266599 tattgataaaacaacatttaatgttgcattgaactttgaaaatgacagttaaatagaaacaaaaattttctccaaaa 34266675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 43159907 - 43159967
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 103  Q
    |||| |||| ||| |||||||||| ||| | ||||||||||||||||  ||||||||||||    
T  43159907 atatttaagggtaatattgataaatcaacatttaatgttgcattgaattttgaaagtgaca 43159967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 40757025 - 40756911
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||  ||||||||| |    
T  40757025 taagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaactaaagtgaaacaaaattattctccaaaatggacaagtattat 40756926  T
Q  148 gaaacggagggagta 162  Q
    |||||||||||||||    
T  40756925 gaaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 165
Target Start/End: Complemental strand, 22388257 - 22388135
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  22388257 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 22388158  T
Q  143 attgtgaaacggagggagtatat 165  Q
    ||| |||||||||||||||||||    
T  22388157 attatgaaacggagggagtatat 22388135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 19976497 - 19976576
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19976497 tattattgataaactaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattttccaaaa 19976576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 37284632 - 37284525
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | | ||||||||    
T  37284632 gtaagagtattagtgataaatcaataat-aatgttgcattgaaacttgaaaatgacaagtaaagtgaaacaaaattattctccaaaagaga-aagtattg 37284535  T
Q  147 tgaaacggag 156  Q
    ||||||||||    
T  37284534 tgaaacggag 37284525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 23366947 - 23367067
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  23366947 atatgcaagggtattattgacaagacaataattaatgttgtattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 23367046  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  23367047 attatgaaacggagggagtat 23367067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 28110214 - 28110094
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||  || ||||||||||   | || |    
T  28110214 atatgtaagggtattattgataaaccaataattaatgttgcattgaaacttgaaaatgacaagtaatgtgaaacaagttttttctccaaaaacgataaat 28110115  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||||||||||||||| |||||    
T  28110114 attgtgaaacggaggaagtat 28110094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 32839035 - 32838928
Alignment:
Q  56 ttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgga 155  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||| |||||||||| | ||    
T  32839035 ttattgataaacaaataattaatattgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattcttcaaaaacgacatgtattgtgaagcaga 32838936  T
Q  156 gggagtat 163  Q
     |||||||    
T  32838935 tggagtat 32838928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 3519065 - 3519185
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  |||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  3519065 atatgcaagggtattattgacaagacaataattaatgttacattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 3519164  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| ||||||||||| |||||    
T  3519165 attatgaaacggaggaagtat 3519185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 159
Target Start/End: Original strand, 36447420 - 36447532
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||||||||||||||||||||||  ||||||||||| ||||||||||| | |||| |||||||||||||||||| ||||   ||| ||||||    
T  36447420 gtaagtgtattattgataaaccaataattaacattgcattgaaatttgaaagtgacgaataaagtgaaacaaaattattctctaaaagcgacatgtattg 36447519  T
Q  147 tgaaacggaggga 159  Q
    |||||||||||||    
T  36447520 tgaaacggaggga 36447532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 12969859 - 12969740
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    |||| |||| |||||||||| ||  ||||||||||| ||||||||||||||||||| |||| |||   ||||||||||||||||||||||||  ||||||    
T  12969859 atatttaagggtattattgagaagacaataattaatattgcattgaaacttgaaagagacatgtattgtgaaacaaaattattctccaaaatggacaagt 12969760  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  12969759 attatgaaacggagggagta 12969740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 39562005 - 39561895
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| || |||||||||||     |||||||||||||||||||||||   ||| ||||||    
T  39562005 gtaagggtattattgacaaaccaataattaatgttgcattgaaatttaaaagtgacaag-----tgaaacaaaattattctccaaaaacgacatgtattg 39561911  T
Q  147 tgaaacggagggagta 162  Q
    ||||||||||||||||    
T  39561910 tgaaacggagggagta 39561895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 1102659 - 1102779
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| || ||||||| ||  ||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||  ||||  ||||||    
T  1102659 atatgcaagggtgttattgacaagacaataattaatgttgcattgaaacttgaaagtgacgagtattgtgaaacaaaattattctctcaaatggacaagt 1102758  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  1102759 attatgaaacggagggagtat 1102779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 39938328 - 39938448
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||| |||||| |||||||||||||   |||||||||||||||||| |||||  ||||||    
T  39938328 atatgcaagggtattattgacaagacaataattaatgttgcattaaaacttaaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 39938427  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| | |||||||||||||||    
T  39938428 attataaaacggagggagtat 39938448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 37673862 - 37673743
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||   ||||||||| |||||||| |||||  ||||||    
T  37673862 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttggaagtgacaagtattttgaaacaaagttattctctaaaatggacaagt 37673763  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||| ||||||    
T  37673762 attatgaaacggaaggagta 37673743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 1646445 - 1646564
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||   |||| |||||||||||||||||||||||||||| |||||   |||||||||||||||||| |||||  ||| ||    
T  1646445 atatgcaagggtattattgacaagataatacttaatgttgcattgaaacttgaaagtgataagtattgtgaaacaaaattattctctaaaatggacaggt 1646544  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  1646545 attatgaaacggagggagta 1646564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 14779964 - 14780023
Alignment:
Q  74 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14779964 ttaatcttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 14780023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 34242143 - 34242217
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctc 128  Q
    ||||||||||||||||||| ||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  34242143 tattattgataaaccaatatttaatattgcattaaaacttaaaagtgaccagtaaaatgaaacaaaattattctc 34242217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 1002831 - 1002760
Alignment:
Q  62 ataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||| ||| ||||| |||||||||||    
T  1002831 ataaaccaataattaatgttgcattgagatttgaaaatgacaagtaaaataaaataaaataattctccaaaa 1002760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 4917933 - 4918031
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgga 155  Q
    |||||| || |||||||||||||||| ||| ||| | |||||||||||||||  |||| ||||||| || | |||||   |||| ||||||||||||||    
T  4917933 tattgacaagccaataattaatgttgaattaaaattcgaaagtgacaagtaatgtgaagcaaaattgtttttcaaaaatgacaaatattgtgaaacgga 4918031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 27901065 - 27900991
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaat 121  Q
    ||||| |||||||||| |||  ||| |||||| || ||| ||||||||||||||| ||||||||||||| |||||    
T  27901065 gtaagggtattattgacaaattaattattaatattacatcgaaacttgaaagtgaaaagtaaaatgaaataaaat 27900991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 479131 - 479207
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  479131 tattgataaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 479207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 15677449 - 15677525
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||||||||  |||| ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  15677449 tattgataaaataatatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 15677525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 28401444 - 28401396
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtga 101  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||    
T  28401444 gtattattgacaaatcaataattaatgtggccttgaaacttgaaagtga 28401396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 14541399 - 14541340
Alignment:
Q  74 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||||||||||||||  ||||||||||||  |||| |||||||| ||| ||||||||||    
T  14541399 ttaatgttgcattgaactttgaaagtgacagttaaattgaaacaatatttttctccaaaa 14541340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 13754049 - 13753964
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| ||| |||||||||| ||| | ||||||||| ||||||  ||||||||||||  |||| || ||||||| | ||||||||||    
T  13754049 taagggtaatattgataaaacaacatttaatgttgtattgaactttgaaagtgacagttaaattggaacaaaaatgttctccaaaa 13753964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 36375656 - 36375580
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaat-gaaacaaaattattctccaaaa 133  Q
    |||||||||| ||| | ||||||||||||||||  ||||||||||| ||| |||| | ||||||||| ||||||||||    
T  36375656 tattgataaaacaacatttaatgttgcattgaactttgaaagtgac-agtcaaataggaacaaaatttttctccaaaa 36375580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 36917009 - 36917050
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaa 89  Q
    ||||| ||||||||||||| | ||||||||||||||||||||    
T  36917009 taagactattattgataaaactataattaatgttgcattgaa 36917050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 10812284 - 10812208
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  10812284 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 10812208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 11560205 - 11560281
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  ||||||||| | ||||||||||    
T  11560205 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaattttctccaaaa 11560281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 32901176 - 32901136
Alignment:
Q  49 aagagtattattgataaaccaataattaatgttgcattgaa 89  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  32901176 aagagtattattgataaatcatcaattaatgttgcattgaa 32901136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 34357263 - 34357187
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||| ||||  | |||||| || ||||||||||    
T  34357263 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaataggaacaaattttttctccaaaa 34357187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 43077391 - 43077331
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 103  Q
    |||| |||| ||| ||||| |||| ||||| ||||||||||||||||  ||||||||||||    
T  43077391 atatctaagggtaatattggtaaaacaatatttaatgttgcattgaactttgaaagtgaca 43077331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 44360519 - 44360443
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||||| ||  | ||||||||||||||||  ||||||||||||  ||||  |||||||||  |||||||||||    
T  44360519 tattgataaaacatcatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaaaattctccaaaa 44360443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 19692884 - 19692999
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||    
T  19692884 gtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctctaaaatagacaagtattg 19692983  T
Q  147 tgaaacggagggagta 162  Q
    ||| ||||| ||||||    
T  19692984 tgatacggatggagta 19692999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 19703469 - 19703584
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||    
T  19703469 gtaagggtgttattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaagtgaaacaaaattattctctaaaatagacaagtattg 19703568  T
Q  147 tgaaacggagggagta 162  Q
    ||| ||||| ||||||    
T  19703569 tgatacggatggagta 19703584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 6129063 - 6128956
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 147  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||| |||||||    
T  6129063 taagggtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattcttcaaaagcgacatgtattgt 6128964  T
Q  148 gaaacgga 155  Q
    ||||||||    
T  6128963 gaaacgga 6128956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 22321387 - 22321267
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||| ||||||    
T  22321387 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatagacaagt 22321288  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  22321287 attatgaaacggagggagtat 22321267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 165
Target Start/End: Original strand, 21310579 - 21310701
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  21310579 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 21310678  T
Q  143 attgtgaaacggagggagtatat 165  Q
    ||| |||||||||||||||||||    
T  21310679 attatgaaacggagggagtatat 21310701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 166
Target Start/End: Original strand, 32543642 - 32543760
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 147  Q
    |||| |||||| ||| ||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| ||||   |||||||||||    
T  32543642 taagggtattaatgacaaaccaataattaatgtcgcattaaaacttgaaagtaacaagtaaaatgaaacaaaattattctctaaaagcgacaagtattgt 32543741  T
Q  148 gaaacggagggagtatatt 166  Q
    ||||| || ||||||||||    
T  32543742 gaaacagaaggagtatatt 32543760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 14261202 - 14261322
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  14261202 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 14261301  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  14261302 attatgaaacggagggagtat 14261322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 24706366 - 24706246
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  24706366 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 24706267  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  24706266 attatgaaacggagggagtat 24706246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 25704809 - 25704929
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  25704809 atatgcaagggtattattgacaagacaataattaatgttgcactgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 25704908  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  25704909 attatgaaacggagggagtat 25704929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 12071718 - 12071837
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  12071718 atatgcaagggtattattgacaagacaagaattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 12071817  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  12071818 attatgaaacggagggagta 12071837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 40122606 - 40122487
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  40122606 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 40122507  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| |||||||||| |||||    
T  40122506 attatgaaacggagagagta 40122487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 50839126 - 50839031
Alignment:
Q  67 ccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacggagggagta 162  Q
    ||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||   ||||||||||||||| ||||||||||    
T  50839126 ccaataattaatgttgcattgaaacttgaaaatgacaagtaatgtgaaacaaaattattctccaaaagcgacaagtattgtgaaatggagggagta 50839031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 21064919 - 21065037
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    |||||||||||||||||||  ||  ||||||||||||||||||||||| ||||||| || |||||   |||||||||||||||||| ||||| |||||||    
T  21064919 atatgtaagagtattattgtcaagacaataattaatgttgcattgaaatttgaaagcgataagtattgtgaaacaaaattattctctaaaatgaacaagt 21065018  T
Q  143 attgtgaaacggagggagt 161  Q
    ||| |||||||||||||||    
T  21065019 attatgaaacggagggagt 21065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 20249133 - 20249013
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||| ||  ||||||||||| ||||||||||||||||||| |||| |||   ||||||||||||||||||||||||  ||||||    
T  20249133 atatgtaagggtattattgacaagacaataattaatattgcattgaaacttgaaagagacaggtattgtgaaacaaaattattctccaaaatggacaagt 20249034  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||| ||||||    
T  20249033 attatgaaacggagtgagtat 20249013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 44568995 - 44569115
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||| |||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  44568995 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacatgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 44569094  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  44569095 attatgaaacggagggagtat 44569115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 50768020 - 50768129
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||| |||||  ||||||    
T  50768020 atatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattctctaaaatggacaagt 50768119  T
Q  143 attgtgaaac 152  Q
    ||| ||||||    
T  50768120 attatgaaac 50768129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 165
Target Start/End: Complemental strand, 21661654 - 21661532
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||| |||||||||||||||||||||||||||| || ||   |||||||||||||||||| |||||  ||||||    
T  21661654 atatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgataaatattgtgaaacaaaattattctctaaaatggacaagt 21661555  T
Q  143 attgtgaaacggagggagtatat 165  Q
    ||| |||||||||||||| ||||    
T  21661554 attatgaaacggagggagcatat 21661532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 165
Target Start/End: Complemental strand, 21670418 - 21670296
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||| |||||||||||||||||||||||||||| || ||   |||||||||||||||||| |||||  ||||||    
T  21670418 atatgcaagggtattattgacaagacaatacttaatgttgcattgaaacttgaaagtgataaatattgtgaaacaaaattattctctaaaatggacaagt 21670319  T
Q  143 attgtgaaacggagggagtatat 165  Q
    ||| |||||||||||||| ||||    
T  21670318 attatgaaacggagggagcatat 21670296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 18507381 - 18507276
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    |||||| ||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||  |||||||||||||| ||| ||||   ||||||||||    
T  18507381 gtaagaatattattgacaagtcaataattaatgttgcattgaaacttgaaagtgacaagaaatgtgaaacaaaattatgctctaaaagcgacaagtattg 18507282  T
Q  147 tgaaac 152  Q
    ||||||    
T  18507281 tgaaac 18507276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 48652386 - 48652472
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||||||| ||||| ||||||||||||| ||||| |||||| ||||| ||||||||| |||||||||||||||||||||||    
T  48652386 gtaagggtattattaataaatcaataattaatgtcgcattaaaactttaaagtaacaagtaaagtgaaacaaaattattctccaaaa 48652472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 145
Target Start/End: Original strand, 31892401 - 31892492
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtatt 145  Q
    ||||||||| ||  |||||||||||||| |||| |||||| |||||||||||||   | ||||||||||||||||||| ||| |||||||||    
T  31892401 tattattgacaagacaataattaatgttacattaaaacttaaaagtgacaagtattgtaaaacaaaattattctccaagatagacaagtatt 31892492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 51777771 - 51777841
Alignment:
Q  52 agtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaatta 123  Q
    ||||||||||| ||||||||||||||||||||| |  ||||| ||||||||||||||| | |||||||||||    
T  51777771 agtattattgacaaaccaataattaatgttgcact-taacttaaaagtgacaagtaaagtaaaacaaaatta 51777841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 26676694 - 26676645
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaa 97  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  26676694 taagagtattattgataaatcaataattattgttgcattaaaacttgaaa 26676645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 8735486 - 8735400
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaat 134  Q
    ||||| || ||||| |||| ||||| ||||| ||||||||||  ||||||||||||| ||||  ||||||||||| ||||| |||||    
T  8735486 taagaataatattggtaaaacaatatttaatattgcattgaactttgaaagtgacaattaaatagaaacaaaatttttctctaaaat 8735400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 155
Target Start/End: Complemental strand, 26676645 - 26676577
Alignment:
Q  88 aaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaata-aacaagtattgtgaaacgga 155  Q
    |||||||||||||||||||||| | |||||||||||||||  |||| |   ||||||||||||||||||    
T  26676645 aaacttgaaagtgacaagtaaagtaaaacaaaattattcttaaaaaaatggcaagtattgtgaaacgga 26676577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 39683870 - 39683946
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||||| ||||| ||||||||||||||||  || |||||||||  ||||  ||||||||||| |||| |||||    
T  39683870 tattgataaaacaatatttaatgttgcattgaactttaaaagtgacagttaaatagaaacaaaatttttctacaaaa 39683946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 42629414 - 42629342
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaa 120  Q
    |||| ||| |||||||||| ||| | ||||||||||||||||  ||||||||||||| |||| ||||| ||||    
T  42629414 taagggtaatattgataaaacaaaatttaatgttgcattgaactttgaaagtgacaattaaattgaaataaaa 42629342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 53599942 - 53600018
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||||| ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  53599942 tattggtaaaacaatatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 53600018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 56576259 - 56576335
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||||| ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  56576259 tattggtaaaacaatatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 56576335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 20714413 - 20714322
Alignment:
Q  69 aataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacggagggag 160  Q
    |||||||||||||||||||||| || ||| ||| || ||| |||||| ||| |||||||| ||||   |||  |||||||||||| ||||||    
T  20714413 aataattaatgttgcattgaaatttaaaaatgataaataatatgaaataaatttattctctaaaagtgacagatattgtgaaacgtagggag 20714322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 20714463 - 20714426
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcat 85  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  20714463 taagggtattattgacaaaccaataattaatgttgcat 20714426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 3436223 - 3436299
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  3436223 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 3436299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 26906551 - 26906591
Alignment:
Q  63 taaaccaataattaatgttgcattgaaacttgaaagtgaca 103  Q
    |||| ||||| |||||||||||||||| |||||||||||||    
T  26906551 taaaacaatatttaatgttgcattgaaccttgaaagtgaca 26906591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 38542432 - 38542508
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||||| ||||||||||| ||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  38542432 tattggtaaaacaatatttaatgttgcactgaattttgaaagtgacatttaaataggaacaaaatttttctccaaaa 38542508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 38617904 - 38617852
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaa 109  Q
    |||||||||| ||||| ||||||||||||| ||  ||||||||||||| ||||    
T  38617904 tattgataaaacaatatttaatgttgcattaaactttgaaagtgacaattaaa 38617852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 42513182 - 42513258
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  42513182 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacacttaaatagtaacaaaatttttctccaaaa 42513258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 44069119 - 44069043
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| |||| |||||    
T  44069119 tattgataaaacaacatttaatgttgcattgaactttgaaagtgacacttaaataggaacaaaatttttctacaaaa 44069043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 50623502 - 50623430
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctcc 129  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||| ||||  |||||||| || ||||||    
T  50623502 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaatagaaacaaattttttctcc 50623430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 43 - 165
Target Start/End: Original strand, 17942601 - 17942723
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||    
T  17942601 atatgtaagggtattattgacaaaacaataattaatgttgcattgaaacttgaaagtgacaagtattataaaacaaaattattctccaaaatggacaagt 17942700  T
Q  143 attgtgaaacggagggagtatat 165  Q
    ||| |||||||||||||||||||    
T  17942701 attatgaaacggagggagtatat 17942723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 15064814 - 15064694
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||    
T  15064814 atatgcaagggtattattgacaagacaataattaatgttgtattgaaacttgaaagtgacaagtattatgaaacaaaattattctccaaaatggacaagt 15064715  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  15064714 attatgaaacggagggagtat 15064694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 8235783 - 8235904
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||| |||||| ||||||    
T  8235783 atatgtaagggtattattgataagacaataattaatattgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatagacaagt 8235882  T
Q  143 attgtgaaacggagggagtata 164  Q
    ||| ||||||||| | ||||||    
T  8235883 attatgaaacggatgaagtata 8235904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 8626640 - 8626760
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  8626640 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 8626739  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  8626740 attatgaaacggagggagtat 8626760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 13757365 - 13757485
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  13757365 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 13757464  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| ||||||||| |||||||    
T  13757465 attatgaaacggatggagtat 13757485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 29260350 - 29260469
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||| ||  || ||||||||||||||||||||||||||| |||||||||   |||||||||||||||||| |||||  ||||||    
T  29260350 atatgtaagggtattattgacaagacagtaattaatgttgcattgaaacttgaaaatgacaagtattttgaaacaaaattattctctaaaatggacaagt 29260449  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  29260450 attatgaaacggagggagta 29260469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 1605736 - 1605856
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||| ||||||| ||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  1605736 atatgcaagggtattattgacaagacaataattaatgttgtattgaaatttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 1605835  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  1605836 attatgaaacggagggagtat 1605856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 7761458 - 7761577
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| |||  |||||||||| ||||||||||||||||||||||||| ||   |||||||||||||||||| |||||  ||||||    
T  7761458 atatgcaagggtattattgacaaaataataattaatattgcattgaaacttgaaagtgacaaatattgtgaaacaaaattattctctaaaatggacaagt 7761557  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  7761558 attatgaaacggagggagta 7761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 20398353 - 20398235
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||||||| ||   |||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||||   ||| ||||||    
T  20398353 gtaagggtattattgacaatttaataattaatgttgcattaaaacttgaaagtggcaagtaaagtgaaacaaaattattttccaaaagtgacatgtattg 20398254  T
Q  147 tgaaacggagggagtatat 165  Q
    ||||||| |||||||||||    
T  20398253 tgaaacgaagggagtatat 20398235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 4129585 - 4129703
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||| || |||||  ||||||    
T  4129585 atatgcaagggtattattgacaagacaata-ttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttctaaaatggacaagt 4129683  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  4129684 attatgaaacggagggagta 4129703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 1814762 - 1814873
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 153  Q
    ||||||||| ||||||||||| |||||||||||| || || ||||||||||||||| ||||| ||||||||||| |||||   ||| |||||||||||||    
T  1814762 tattattgacaaaccaataatcaatgttgcattggaaattaaaagtgacaagtaaagtgaaataaaattattcttcaaaagtgacatgtattgtgaaacg 1814861  T
Q  154 gagggagtatat 165  Q
     ||| |||||||    
T  1814862 aaggaagtatat 1814873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 3798261 - 3798339
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 125  Q
    ||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  3798261 gtaagggtattattgataaactcataattaatgttgcattaaaacttgaaagtgacaagtaaagtgaaacaaaactatt 3798339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 26860932 - 26861031
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaac 152  Q
    |||||||||| ||| ||||||| ||||||| |||||||| ||||| ||||||||||| ||||||||| |||||||||||||   ||| ||||||||||||    
T  26860932 gtattattgacaaatcaataatcaatgttgtattgaaacatgaaaatgacaagtaaagtgaaacaaacttattctccaaaaatgacatgtattgtgaaac 26861031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 31559857 - 31559738
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||| | ||  |||||||||||||||||||||||||||||||| |||||||   | ||| |||||||||||| |||||  | ||||    
T  31559857 atatgcaagggtattattaacaagacaataattaatgttgcattgaaacttgaaagtaacaagtattgtaaaataaaattattctctaaaatggagaagt 31559758  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  31559757 attatgaaacggagggagta 31559738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 30734602 - 30734483
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||||||   |||||||||||||||||||||| |||||| |||||| ||   | ||||||||||||| ||||||||  ||||||    
T  30734602 atatgcaagggtattattgataagataataattaatgttgcattgaaatttgaaaatgacaactattgtaaaacaaaattattttccaaaatggacaagt 30734503  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||| ||||| ||||    
T  30734502 attatgaaaaggaggaagta 30734483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 847895 - 847829
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaa 109  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||||  |||||| |||||||||||    
T  847895 atatttaagagtattattgacaaagcaataattaatgttgcattgaactttgaaaatgacaagtaaa 847829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 31244891 - 31244951
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 103  Q
    |||| ||||| || |||||||||| ||| ||||||||||||||||||  ||||||||||||    
T  31244891 atatctaagaataatattgataaaacaagaattaatgttgcattgaactttgaaagtgaca 31244951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 30237046 - 30236987
Alignment:
Q  74 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||||||||||||||  ||||||||||||  |||| ||||||||| || ||||||||||    
T  30237046 ttaatgttgcattgaattttgaaagtgacagttaaattgaaacaaattttttctccaaaa 30236987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 3849159 - 3849074
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| || ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  3849159 taagaataatattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 3849074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 14287149 - 14287190
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattga 88  Q
    ||||||||||||| |||||| ||||||||| |||||||||||    
T  14287149 gtaagagtattatggataaatcaataattagtgttgcattga 14287190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 24120645 - 24120734
Alignment:
Q  70 ataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacggaggga 159  Q
    ||||||| ||||||||| |||||  ||||||||||||||  ||||||| || | ||||||||||   |||||| || ||||| |||||||    
T  24120645 ataattagtgttgcattaaaactaaaaagtgacaagtaatgtgaaacacaaattttctccaaaaacgacaagttttttgaaatggaggga 24120734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 22050134 - 22050058
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||||| ||  | ||||||||||||||||  ||||||||||||  ||||  |||||||||  |||||||||||    
T  22050134 tattgataaaacatcatttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaaaattctccaaaa 22050058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 24876723 - 24876831
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    |||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  24876723 gtaagagtattattgacaaaccaataattaatgtcgcattgacacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaaacgacaagtattg 24876822  T
Q  147 tgaaacgga 155  Q
    ||| |||||    
T  24876823 tgagacgga 24876831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 43 - 165
Target Start/End: Original strand, 23526397 - 23526519
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||  ||||||    
T  23526397 atatgtaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattcttcaaaatggacaagt 23526496  T
Q  143 attgtgaaacggagggagtatat 165  Q
    ||| |||||||||||||||||||    
T  23526497 attatgaaacggagggagtatat 23526519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 284491 - 284611
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  284491 atatgcaagggtattattgataagtcaataattaatgttgcattgaaacttgaaagtgacaagtattttgaaacaaaattattctctaaaatggacaagt 284590  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  284591 attatgaaacggagggagtat 284611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 51064869 - 51064753
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||| |||||  ||||||||||    
T  51064869 gtaagggtattattgataaactaataattaacgttgcattgaaacttgaaagtgacaaataaagtgaaacaaaattattctctaaaatggacaagtattg 51064770  T
Q  147 tgaaacggagggagtat 163  Q
    |||||| || |||||||    
T  51064769 tgaaacagacggagtat 51064753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 34458843 - 34458724
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||   |||  |    
T  34458843 atatgtaagggtattatcggtaaaccaataattaatgttgcatcgaaacttgaaagtgacaagtaaagtgaaacaaaattattctccaaaagcgacatat 34458744  T
Q  143 attgtgaaacggagggagta 162  Q
    ||||||||||||| ||||||    
T  34458743 attgtgaaacggaaggagta 34458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 40783776 - 40783656
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  40783776 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 40783677  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  40783676 attatgaaacggagggagtat 40783656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 43 - 154
Target Start/End: Complemental strand, 40261404 - 40261293
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||   |||  |    
T  40261404 atatgtaagggtattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattattcttcaaaagcgacatat 40261305  T
Q  143 attgtgaaacgg 154  Q
    ||||||||||||    
T  40261304 attgtgaaacgg 40261293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 321784 - 321903
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||| |||||  ||||||    
T  321784 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaaatattctctaaaatggacaagt 321883  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  321884 attatgaaacggagggagta 321903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 23045398 - 23045279
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||| |||||  ||||||    
T  23045398 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagggacaagtattgtgaaacaaaattattctctaaaatggacaagt 23045299  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  23045298 attatgaaacggagggagta 23045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 31003902 - 31003787
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| ||||||| || ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||   | ||||||||    
T  31003902 gtaagggtattatggacaaaccaacaattaatgttgcattgaaacttgaaagtggcaagtaatgtgaaacaaaattattctccaaaagcgataagtattg 31003803  T
Q  147 tgaaacggagggagta 162  Q
    |||||| |||||||||    
T  31003802 tgaaacagagggagta 31003787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 47037971 - 47037852
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   | |||||||||||||||  |||||| ||||||    
T  47037971 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaaattattctttaaaatagacaagt 47037872  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  47037871 attatgaaacggagggagta 47037852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 46771796 - 46771910
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    |||||||||||||||||||| ||   ||||||||||||| ||||||||||||||||||| |||||   ||||||||||||||||| |||||| |||||||    
T  46771796 atatgtaagagtattattgacaagaaaataattaatgttacattgaaacttgaaagtgataagtattgtgaaacaaaattattcttcaaaatgaacaagt 46771895  T
Q  143 attgtgaaacggagg 157  Q
    ||| |||||||||||    
T  46771896 attatgaaacggagg 46771910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 18396864 - 18396971
Alignment:
Q  55 attattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgg 154  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||| | |  | |||||||||||||||||||||  |||||||||||||||| ||    
T  18396864 attattgaaaagtcaataattaatgttgcattgaaacttgaaagtgacaaattatgtaaaacaaaattattctccaaaagcaacaagtattgtgaaatgg 18396963  T
Q  155 agggagta 162  Q
    ||||||||    
T  18396964 agggagta 18396971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 24772014 - 24771905
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 153  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||| |||| |||   |||||||||||||||||| |||||  ||||||||| |||||||    
T  24772014 tattattgaaaaaacaataattaatattgcattgaaacttgaaagagacatgtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 24771915  T
Q  154 gagggagtat 163  Q
    ||||||||||    
T  24771914 gagggagtat 24771905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 1837937 - 1837826
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaa---aatgaaacaaaattattctccaaaataaacaagtattgtga 149  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||   | ||||||||||||||||| ||||  ||||| ||||| |||    
T  1837937 gtattattgataaatcaataattaatgttgcattgaaacttaaaagtgacaagtaaattattgaaacaaaattattcttcaaa--aaacatgtattatga 1837840  T
Q  150 aacggagggagtat 163  Q
    |||||| |||||||    
T  1837839 aacggatggagtat 1837826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 14925626 - 14925734
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    |||||||||||||||| |||||||||  ||| |||||||||||||||||||  |||||||||| |||||||||||||| ||| ||||   ||||||||||    
T  14925626 gtaagagtattattgacaaaccaata--taaggttgcattgaaacttgaaaacgacaagtaaagtgaaacaaaattatgctctaaaaacgacaagtattg 14925723  T
Q  147 tgaaacggagg 157  Q
    |||||||||||    
T  14925724 tgaaacggagg 14925734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 25929261 - 25929368
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 147  Q
    |||| |||||||||||||| ||||| |||||||||| |||||||||||||| | ||||| ||||||||||||||||||||  ||||   |||||||||||    
T  25929261 taagggtattattgataaatcaatatttaatgttgcgttgaaacttgaaaggggcaagtgaaatgaaacaaaattattctttaaaagcgacaagtattgt 25929360  T
Q  148 gaaacgga 155  Q
    ||||||||    
T  25929361 gaaacgga 25929368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 40052572 - 40052501
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 125  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  40052572 tattattgacaaaccaataattaatgttgcattgaaacttgaaagtgacaagtaatgtgaaacaaaattatt 40052501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 23166965 - 23166848
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgt 147  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||||||||| | || |||  |||||||||||||||||| ||||   || ||||||||    
T  23166965 taagagtattattgacaaatcaataattaatgttgtattgaaacttgaaagtaataaataatgtgaaacaaaattattctctaaaagcgacgagtattgt 23166866  T
Q  148 gaaacggagggagtatat 165  Q
    ||||||||  ||||||||    
T  23166865 gaaacggatagagtatat 23166848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 27143127 - 27143014
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||  ||||||||||||  |||||||||||||||||||||||   |||| ||||     
T  27143127 gtaagggtattattgacaaaccaataattaatgttgtattgaaacttg--agtgacaagtaatgtgaaacaaaattattctccaaaagcgacaattatta 27143030  T
Q  147 tgaaacggagggagta 162  Q
    |||| |||| ||||||    
T  27143029 tgaagcggatggagta 27143014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 31061578 - 31061463
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca---agtaaaatgaaacaaaattattctccaaaataaaca 139  Q
    |||||| || |||||||||  |||||||||||||||||||||||||||||||| |||||||   |||||  ||||| ||||||||| |||||||   |||    
T  31061578 atatgtgagggtattattgtcaaaccaataattaatgttgcattgaaacttgagagtgacaagtagtaatgtgaaataaaattattttccaaaagtgaca 31061479  T
Q  140 agtattgtgaaacgga 155  Q
    ||||||||||||||||    
T  31061478 agtattgtgaaacgga 31061463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 33082902 - 33083022
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    |||| |||| |||||||||| ||  ||||||||||| ||||||||||| ||||||| |||| |||   |||||||||||||||||  |||||  ||||||    
T  33082902 atatttaagggtattattgagaagacaataattaatattgcattgaaatttgaaagagacatgtattgtgaaacaaaattattctttaaaatggacaagt 33083001  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  33083002 attatgaaacggagggagtat 33083022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 27211074 - 27210961
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||||| || ||||||||||   |||||||||||||||||  |||||  |||| |    
T  27211074 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttaaatgtgacaagtattgtgaaacaaaattattcttaaaaatggacaaat 27210975  T
Q  143 attgtgaaacggag 156  Q
    ||| ||||||||||    
T  27210974 attatgaaacggag 27210961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 40562380 - 40562293
Alignment:
Q  68 caataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacgga 155  Q
    ||||||||||||||||||||||||||||||||||||||||   | ||||||||| ||||| ||||||  ||||||||| | |||||||    
T  40562380 caataattaatgttgcattgaaacttgaaagtgacaagtattgtaaaacaaaatcattcttcaaaatggacaagtattataaaacgga 40562293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 14350565 - 14350510
Alignment:
Q  71 taattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattc 126  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||    
T  14350565 taattaatgttgcattgaaactttaaagtgacaagtaatataaaacaaaattattc 14350510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 3657236 - 3657282
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaactt 93  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  3657236 gtaaaagtattattgacaaaccaataattaatgttgcattgaaactt 3657282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 1749457 - 1749515
Alignment:
Q  68 caataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattc 126  Q
    |||||| ||||||||||||||||||| ||||| |||||||   ||||||||||||||||    
T  1749457 caataactaatgttgcattgaaacttaaaagtaacaagtattgtgaaacaaaattattc 1749515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 19455542 - 19455626
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| ||| ||||| |||| ||| | ||||||||||||||||  ||||||||||||| |||| |||||||||| | ||||||||||    
T  19455542 taagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaattgaaacaaaaat-ttctccaaaa 19455626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 32348072 - 32347987
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| ||| ||||| |||| ||| | ||||||||||||||||  ||||||||| ||  |||| |||||||||||| ||||||||||    
T  32348072 taagggtaatattggtaaaacaacatttaatgttgcattgaactttgaaagtggcagttaaattgaaacaaaatttttctccaaaa 32347987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 19093341 - 19093277
Alignment:
Q  69 aataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| ||||||||||||||||  |||||||||||| |||||  | ||||||||| ||||||||||    
T  19093341 aatatttaatgttgcattgaactttgaaagtgacaggtaaataggaacaaaatttttctccaaaa 19093277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 17581139 - 17581069
Alignment:
Q  55 attattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattatt 125  Q
    |||||||| |||| || |||||| |||| ||||||| |||||| |||||| |||| | |||||||||||||    
T  17581139 attattgacaaacaaaaaattaacgttggattgaaatttgaaaatgacaaataaagtaaaacaaaattatt 17581069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 5597917 - 5597832
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| ||| |||||||||| || || ||||||||||||||||  ||| ||||||||  ||||  |||||||||  |||||||||||    
T  5597917 taagggtaatattgataaaacattatttaatgttgcattgaactttggaagtgacagttaaatagaaacaaaaaaattctccaaaa 5597832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 35531447 - 35531523
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||  ||||  | ||||||||| ||||||||||    
T  35531447 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaa 35531523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 51613510 - 51613450
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 103  Q
    |||| |||||||| |||||||||| ||| | |||||| |||||||||  ||||||||||||    
T  51613510 atatctaagagtaatattgataaaacaacatttaatgatgcattgaactttgaaagtgaca 51613450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 165
Target Start/End: Original strand, 27813969 - 27814091
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  27813969 atatgcaagggtattattgacaacacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 27814068  T
Q  143 attgtgaaacggagggagtatat 165  Q
    ||| |||||||||||||||||||    
T  27814069 attatgaaacggagggagtatat 27814091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 47110608 - 47110728
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| ||||| || ||||    
T  47110608 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatgaataagt 47110707  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  47110708 attatgaaacggagggagtat 47110728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 36453243 - 36453123
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  ||||||    
T  36453243 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaagt 36453144  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||| ||||||    
T  36453143 attatgaaacggagagagtat 36453123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 16662255 - 16662370
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||   ||||||||||    
T  16662255 gtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaaagtgacaagtattg 16662354  T
Q  147 tgaaacggagggagta 162  Q
    ||||| ||||||||||    
T  16662355 tgaaatggagggagta 16662370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 17636615 - 17636730
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||   ||||||||||    
T  17636615 gtaagggtattaatgacaaatcaataattaatgttgcattgaaacttgaaagtgacaagtaatttaaaacaaaattattcttcaaaagtgacaagtattg 17636714  T
Q  147 tgaaacggagggagta 162  Q
    ||||| ||||||||||    
T  17636715 tgaaatggagggagta 17636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 163
Target Start/End: Complemental strand, 25614472 - 25614352
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  |||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||| |||||  |||| |    
T  25614472 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaatt 25614373  T
Q  143 attgtgaaacggagggagtat 163  Q
    ||| |||||||||||||||||    
T  25614372 attatgaaacggagggagtat 25614352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 10981666 - 10981785
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||  |||| |    
T  10981666 atatgcaagggtattattgacaagacaataattaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattctctaaaatggacaaat 10981765  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||| ||||||||||    
T  10981766 attatgaaatggagggagta 10981785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 40349120 - 40349240
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| ||||||||||  || |||||||||||||||||||||||||| |||||||||||||   |||||| ||||||||||| |||||  ||||||    
T  40349120 atatgcaagggtattattgaccaaacaataattaatgttgcattgaaacttaaaagtgacaagtattgtgaaac-aaattattctctaaaatggacaagt 40349218  T
Q  143 attgtgaaacggagggagtata 164  Q
    ||| ||||||||||||||||||    
T  40349219 attatgaaacggagggagtata 40349240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 3091671 - 3091755
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattct 127  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  3091671 atatgtaagggtattattgacaaaccaatatttaatgttgcattgaaacttaaaaatgacaagtaaagtgaaacaaaattattct 3091755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 27941099 - 27941013
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||||||||| || |||||||||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  27941099 gtaagggtattattgacaagccaataattaatgttgcaatgaaacttgaaagtgacaagtaatgtgaaacaaaattgttctccaaaa 27941013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 16360549 - 16360654
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacggag 156  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||||||||||| |||| | ||||||||||||||||   |||| ||||||||||| ||     
T  16360549 tattgacaaaccaatatttaatgttgtattgaaacttgaaagtgacaagtaaagtgaagc-aaattattctccaaaaacgacaaatattgtgaaacagaa 16360647  T
Q  157 ggagtat 163  Q
    |||||||    
T  16360648 ggagtat 16360654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 24456874 - 24456794
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||||||||||||  | || |||||||||||||||||||||| ||||||||||||| | ||||||||||||||| |||||    
T  24456874 gtattattgataaattagtagttaatgttgcattgaaacttgagagtgacaagtaaagttaaacaaaattattcttcaaaa 24456794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 3498874 - 3498813
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaa 104  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||| |||||||    
T  3498874 atatgtaagagtattatcgataaatcaataattaattttgcattgaaagttgaatgtgacaa 3498813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 7743509 - 7743427
Alignment:
Q  51 gagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||||||| ||| || |||||||||||  |||||||||||||| ||| |||||| |||| ||||| ||||||||||| |||||    
T  7743509 gagtattactgagaatccaataattaacattgcattgaaacttaaaaatgacaaataaagtgaaataaaattattcttcaaaa 7743427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 159
Target Start/End: Original strand, 8380100 - 8380210
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| ||||| || | |||||||||| |||||||| |||||||||| ||||||||||  ||| |||||||   |||||||||||||   ||| ||||||    
T  8380100 gtaagggtatttttaacaaaccaataactaatgttgtattgaaacttaaaagtgacaaaaaaagtgaaacag--ttattctccaaaaacgacatgtattg 8380197  T
Q  147 tgaaacggaggga 159  Q
    | |||||||||||    
T  8380198 taaaacggaggga 8380210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 35112523 - 35112438
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    |||| ||| ||||| |||| ||||| ||||||||||| ||||  ||||||||||||  |||| |||||||||||| ||||||||||    
T  35112523 taagggtaatattggtaaaacaatatttaatgttgcaatgaactttgaaagtgacagttaaattgaaacaaaatttttctccaaaa 35112438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 31399089 - 31399165
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||||||  ||||||||||||| ||||| |||||||| || ||||||||||    
T  31399089 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgacaattaaaaagaaacaaattttttctccaaaa 31399165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 37983300 - 37983366
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaa 120  Q
    ||||||||| |||| ||||||||||||| |||||| | || |||||||||| |||||||||| ||||    
T  37983300 tattattgacaaactaataattaatgttacattgatatttaaaagtgacaaataaaatgaaataaaa 37983366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 33257966 - 33257890
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||||||  |||||||||| |  |||| |||||||||||| ||||||||||    
T  33257966 tattggtaaaacaacatttaatgttgcattgaactttgaaagtgatagttaaattgaaacaaaatttttctccaaaa 33257890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 28200488 - 28200542
Alignment:
Q  73 attaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattct 127  Q
    ||||||| || ||| |||||| ||||||||||||||| |||||||||||| ||||    
T  28200488 attaatgctgtattaaaacttaaaagtgacaagtaaagtgaaacaaaattgttct 28200542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 6737258 - 6737294
Alignment:
Q  53 gtattattgataaaccaataattaatgttgcattgaa 89  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  6737258 gtattattgataaaacaataattaatattgcattgaa 6737294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0939 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0939
Description:

Target: scaffold0939; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 1110 - 1188
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaa 132  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  1110 tattattgataaaccaataattaatgttgcatcgaaacttaaaaatgacaagtaaaataaaacaaaattattctccaaa 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 7830 - 7946
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||  ||||  |||||||||||  ||||   ||||||||||    
T  7830 gtaagagtattattgacaaaccgataattaatgttgcattaaaacttgaaagtgacaagtaatgtgaattaaaattattctttaaaaacgacaagtattg 7929  T
Q  147 tgaaacggagggagtat 163  Q
    |||||| || |||||||    
T  7930 tgaaacagatggagtat 7946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 162
Target Start/End: Original strand, 320 - 438
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagt 142  Q
    ||||| ||| |||||||||| ||  ||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||| || |||||  ||||||    
T  320 atatgcaagggtattattgacaagacaata-ttaatgttgcattgaaacttgaaagtgacaagtattgtgaaacaaaattattttctaaaatggacaagt 418  T
Q  143 attgtgaaacggagggagta 162  Q
    ||| ||||||||||||||||    
T  419 attatgaaacggagggagta 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 162
Target Start/End: Original strand, 45622 - 45730
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattgtgaaacg 153  Q
    ||||||||||||  ||||||||||| ||||||||||| ||||||| |||| |||   |||||||||||||||||| |||||  ||||||||| |||||||    
T  45622 tattattgataatacaataattaatattgcattgaaatttgaaagagacatgtattgtgaaacaaaattattctctaaaatggacaagtattatgaaacg 45721  T
Q  154 gagggagta 162  Q
    |||||||||    
T  45722 gagggagta 45730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 65279 - 65199
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctc 128  Q
    |||| |||||||||| ||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||    
T  65279 taagggtattattgacaaaccaataattaatattgcattgaaatttaaaagtgacaagtaatatgaaacaaaattattctc 65199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 7015 - 6911
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    |||||||||||||||| |   |||||||||||||||||||||||||| || | ||||| ||| ||||||||||||||||||||||||   ||||||||||    
T  7015 gtaagagtattattgacacgtcaataattaatgttgcattgaaacttaaacg-gacaaataatatgaaacaaaattattctccaaaaacgacaagtattg 6917  T
Q  147 tgaaac 152  Q
    ||||||    
T  6916 tgaaac 6911  T

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Target: scaffold0076 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 15438 - 15322
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||| ||||| ||| ||||| |||||||| ||| ||| | ||||| | ||| |||||    
T  15438 gtaagcgtattattgacaaaccgataattaatgttgcattgaaacttaaaagttacatgtaaagtgaaacaatattgttcactaaaattatcaaatattg 15339  T
Q  147 tgaaacggagggagtat 163  Q
    |||||| ||| ||||||    
T  15338 tgaaacagagtgagtat 15322  T

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Target: scaffold0056 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 152
Target Start/End: Original strand, 71245 - 71350
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaataaacaagtattg 146  Q
    ||||| |||| ||| | ||||||||||||||| ||||||| |||||| ||||||||||||||  ||||| ||||||||||| |||||   ||||||||||    
T  71245 gtaagggtataattaacaaaccaataattaattttgcattcaaacttaaaagtgacaagtaatgtgaaataaaattattcttcaaaaacgacaagtattg 71344  T
Q  147 tgaaac 152  Q
    ||||||    
T  71345 tgaaac 71350  T

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Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 375 - 295
Alignment:
Q  54 tattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaat 134  Q
    ||||||||| ||  ||||||||||||||||||| ||| || |||||||||||||   |||||||||||||||||| |||||    
T  375 tattattgacaagacaataattaatgttgcattaaaatttaaaagtgacaagtattgtgaaacaaaattattctctaaaat 295  T

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Target: scaffold0060 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 10904 - 11025
Alignment:
Q  47 gtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaac-----aaaattattctccaaaataaacaag 141  Q
    |||||| ||||||||| ||| ||||| ||||||||||||  |||||| || ||||||||||||  | |||     ||||| |||||||||||  ||||||    
T  10904 gtaagaatattattgacaaatcaatatttaatgttgcatataaacttaaatgtgacaagtaaagcggaacaaattaaaataattctccaaaagcaacaag 11003  T
Q  142 tattgtgaaacggagggagtat 163  Q
    |||||||||| | |||||||||    
T  11004 tattgtgaaatgaagggagtat 11025  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 419639 - 419700
Alignment:
Q  48 taagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaa 109  Q
    |||||||| |||||||||| ||| | |||| |||||||||||  ||||||||||||| ||||    
T  419639 taagagtaatattgataaaacaacatttaaagttgcattgaattttgaaagtgacaaataaa 419700  T

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Target: scaffold0172 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 26283 - 26359
Alignment:
Q  57 tattgataaaccaataattaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattctccaaaa 133  Q
    ||||| |||| ||| | ||||||||||||||||  || |||||||||| ||||  |||||||| || ||||||||||    
T  26283 tattggtaaaacaacatttaatgttgcattgaactttaaaagtgacaattaaatagaaacaaattttttctccaaaa 26359  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 19059 - 19007
Alignment:
Q  111 tgaaacaaaattattctccaaaataaacaagtattgtgaaacggagggagtat 163  Q
    |||||||||||||||||||||||   ||||||||||| ||| |||| ||||||    
T  19059 tgaaacaaaattattctccaaaaacgacaagtattgtaaaaaggagagagtat 19007  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 147270 - 147330
Alignment:
Q  43 atatgtaagagtattattgataaaccaataattaatgttgcattgaaacttgaaagtgaca 103  Q
    |||| |||| ||| |||||||||| ||| | ||||||||||||||||  ||||||||||||    
T  147270 atatctaagggtaatattgataaaacaacatttaatgttgcattgaactttgaaagtgaca 147330  T

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