View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8237_low_13 (Length: 228)
Name: NF8237_low_13
Description: NF8237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8237_low_13 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 32830534 - 32830754
Alignment:
| Q |
1 |
aagtacttccaaatgtagaaatcgttgatttataccgtaattttgaatggagagaaatacacgcgctggagaaagaatttgggataggtgtcttaatggt |
100 |
Q |
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| T |
32830534 |
aagtacttcaaaatgtagaaatcgttgatttataccataattttgaatggagagaaatacacgtgctggaaaaagaatttgggataggtgtcttaatggt |
32830633 |
T |
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| Q |
101 |
attttttggcaaaatttgatcgtaatttctatttcatcaaacacattgttgccgccaaaaatgtgagagttttcctttcctttccccaaatatataaaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |
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| T |
32830634 |
attttttggcaaaatttgatcgtaatttctatttcatcaaacacattgttgccgccaaaaa--tgagagt-----tttcctttccccaaatatataaaag |
32830726 |
T |
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| Q |
201 |
cagcaattgggaatggtaaattggataa |
228 |
Q |
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||||| |||||||||||||||||||||| |
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| T |
32830727 |
cagcacttgggaatggtaaattggataa |
32830754 |
T |
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