View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8241_low_34 (Length: 342)
Name: NF8241_low_34
Description: NF8241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8241_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 32812837 - 32812515
Alignment:
| Q |
1 |
aatagtataatatccttcttatgataaactactggacaacaatacttaggcttcccccatggatactccacctcttcaaaccctaacctccaccatgaag |
100 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32812837 |
aatagtataatatccttcttatgataaaccactggacaacaatacttaggcttcccccatggatactccacctcttcaaaccctaacctccaccatgaag |
32812738 |
T |
|
| Q |
101 |
acaccaaaagctctccattcggaaaaccattatacaattctccccaatcaataatagaccttgcatactcatcacccattctttttgtaccctcccacac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32812737 |
acaccaaaagctctccattcggaaaaccattatacaattctccccaatcaataatagaccttgcatactcatcacccattctttttgtaccctcccacac |
32812638 |
T |
|
| Q |
201 |
catctccaccaaccttgagaattcaccttccttcaattcctcacactttgccgaagcgtacgccgttaaaactgcattcccagcgtactctctcggcaat |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
32812637 |
catctccaccaaccttgagaattcaccttccttcaattcctcacactttgccgaagcttacgccgttaaaactgcattcccagcgtactctctcggcaat |
32812538 |
T |
|
| Q |
301 |
ggaggattcaatcttgaacgtat |
323 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
32812537 |
ggaggattcaatcttgaacgtat |
32812515 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 32830367 - 32830045
Alignment:
| Q |
1 |
aatagtataatatccttcttatgataaactactggacaacaatacttaggcttcccccatggatactccacctcttcaaaccctaacctccaccatgaag |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32830367 |
aatagtataatatccttcctatgataaaccacaggacaacaatacttaggcttcccccatggatactccacctcttcaaaccctagcctccaccatgaag |
32830268 |
T |
|
| Q |
101 |
acaccaaaagctctccattcggaaaaccattatacaattctccccaatcaataatagaccttgcatactcatcacccattctttttgtaccctcccacac |
200 |
Q |
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|
||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||||| ||| |||||| ||| |
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| T |
32830267 |
acaccaaaacatccccatttggaaaaccattatacaactctccccaatcaataatagatcttgcatattcatcactcattcttcttgaaccctcttccac |
32830168 |
T |
|
| Q |
201 |
catctccaccaaccttgagaattcaccttccttcaattcctcacactttgccgaagcgtacgccgttaaaactgcattcccagcgtactctctcggcaat |
300 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||| |
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| T |
32830167 |
catctccaccaaccttgaaaattcaccttccttcaattcctcacactttgccgaagcgtacgctgttaatactgcattcccagtgtacgctctcggcaat |
32830068 |
T |
|
| Q |
301 |
ggaggattcaatcttgaacgtat |
323 |
Q |
| |
|
||||||||||||||||||||||| |
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|
| T |
32830067 |
ggaggattcaatcttgaacgtat |
32830045 |
T |
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