View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8241_low_47 (Length: 297)
Name: NF8241_low_47
Description: NF8241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8241_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 5981178 - 5981463
Alignment:
| Q |
1 |
tggtgctaaagtagtattaaaaaacaaaatgataagtgtatagaaaatcctccccctatcagtttcttttttccataaatgcannnnnnngacctccaat |
100 |
Q |
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| T |
5981178 |
tggtgctaaagtagtattaaaaaacaaaatgataagtgtatagaaaatcctccccctatcagtttcttttttccataaatgcatttttttgacctccaat |
5981277 |
T |
|
| Q |
101 |
ctttctgatgtcaaggtttgctttccctcaattgtgagggtttcagatcttgtataattctcatctaatttctaattgtgtgtatatatgtgtaatgtgt |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5981278 |
ctttctgatgtcaaggtttgctttccttcaattgtgagggtttcagatcttgtataattctcatctaatttctaattgtgtgtatatatgtgtaatgtgt |
5981377 |
T |
|
| Q |
201 |
ttttcttgggtttgaatttttaatgagtaaataatgggtgaggtcgaggcaaattgttactgggtcttattctcttgttgattcat |
286 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5981378 |
tttttttgggtttgaatttttaatgagtaaataatgggtgaggtcgaggcaaattgttactgggtcttattctcttgttgattcat |
5981463 |
T |
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