View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8241_low_90 (Length: 201)
Name: NF8241_low_90
Description: NF8241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8241_low_90 |
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Alignment Details
Target: chr6 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 3940769 - 3940940
Alignment:
| Q |
9 |
tttggtgttgaaggctatgaagatttaaaggatgatgtcctacaagccctagatgccatataagaccttaatcaccttaccttgtagtgttttctttgtt |
108 |
Q |
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| T |
3940769 |
tttggagttgaaggctatgaagatttaaaggatgatgtcctacaagccctagatgccatataagaccttaatcaccttcccttttagtgttttctttgtt |
3940868 |
T |
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| Q |
109 |
cttttttgtaaacatatctagtgaatcaatatgtagcgcaacacttttgattgaagatatgtctaatatctaa |
181 |
Q |
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| T |
3940869 |
c-tttttgtaaacatatccggtgaatcaatatgtagcgcaacactgttgattgaagatatgtctaatatctaa |
3940940 |
T |
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