View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8242_high_16 (Length: 241)
Name: NF8242_high_16
Description: NF8242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8242_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 19330566 - 19330789
Alignment:
| Q |
1 |
taaagtacgaaagtcatacatatgagatggaaatgtgtggattgatgtttgaattgtcttatattttgggttgcaggtgtggaattgctttctgttacaa |
100 |
Q |
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| T |
19330566 |
taaagtacgaaagtcatacatatgagatggaaatgtgtggattgatgtttgaattgtcttatattttgggttgcaggtgtggaattgctttctgttacaa |
19330665 |
T |
|
| Q |
101 |
ctgtggagtccctaacaagaataccatccattattgcagcaactgtaaacactaacgactttgactgctagtaactttatgttattatgcaatataaagg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
19330666 |
ctgtggagtccctaacaagaataccatccattattgcagcaactgtaaacactaacgactttgactgctagtaacttcatgttattatgcaatataaagg |
19330765 |
T |
|
| Q |
201 |
ttcgaattgtttagaccttcatgt |
224 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
19330766 |
ttcgaattgtttagaccttcatgt |
19330789 |
T |
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