View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8242_low_24 (Length: 222)

Name: NF8242_low_24
Description: NF8242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8242_low_24
NF8242_low_24
[»] chr6 (42 HSPs)
chr6 (7-204)||(30781210-30781396)
chr6 (58-181)||(34446573-34446690)
chr6 (58-112)||(6389751-6389805)
chr6 (38-178)||(8389411-8389543)
chr6 (132-180)||(31959220-31959268)
chr6 (58-182)||(34894967-34895085)
chr6 (130-181)||(7625184-7625235)
chr6 (58-113)||(17168459-17168514)
chr6 (131-181)||(8776908-8776958)
chr6 (131-181)||(28152167-28152217)
chr6 (131-181)||(34595203-34595253)
chr6 (132-181)||(9107299-9107348)
chr6 (58-107)||(12235521-12235570)
chr6 (58-109)||(12086345-12086396)
chr6 (58-113)||(19602177-19602232)
chr6 (58-102)||(9195761-9195805)
chr6 (109-181)||(32313463-32313535)
chr6 (134-181)||(3209471-3209518)
chr6 (58-101)||(7569176-7569219)
chr6 (60-103)||(9024182-9024225)
chr6 (131-178)||(9025448-9025495)
chr6 (131-182)||(9027236-9027287)
chr6 (131-182)||(16766777-16766828)
chr6 (58-113)||(26247434-26247489)
chr6 (18-92)||(28715262-28715337)
chr6 (132-182)||(7938170-7938220)
chr6 (131-181)||(8365448-8365498)
chr6 (131-181)||(17327590-17327640)
chr6 (58-112)||(34541747-34541801)
chr6 (132-181)||(7248439-7248488)
chr6 (61-181)||(10339054-10339174)
chr6 (131-180)||(31384999-31385048)
chr6 (58-102)||(6299520-6299564)
chr6 (58-102)||(6306330-6306374)
chr6 (58-102)||(7086803-7086847)
chr6 (58-102)||(7265600-7265644)
chr6 (58-102)||(9025501-9025545)
chr6 (50-94)||(10335391-10335435)
chr6 (58-102)||(10842540-10842584)
chr6 (132-180)||(17841530-17841578)
chr6 (58-102)||(19040360-19040404)
chr6 (58-102)||(26178688-26178732)
[»] chr3 (51 HSPs)
chr3 (58-181)||(52369783-52369906)
chr3 (58-182)||(25074797-25074915)
chr3 (58-181)||(21211296-21211413)
chr3 (58-182)||(8903440-8903555)
chr3 (131-181)||(40052381-40052431)
chr3 (58-113)||(12704653-12704708)
chr3 (118-183)||(2408588-2408653)
chr3 (58-107)||(3730167-3730216)
chr3 (132-181)||(34185052-34185101)
chr3 (58-102)||(1830351-1830395)
chr3 (58-102)||(20691327-20691371)
chr3 (58-179)||(24204983-24205092)
chr3 (131-179)||(25775576-25775624)
chr3 (60-182)||(8039216-8039338)
chr3 (58-109)||(15864841-15864892)
chr3 (58-113)||(25892468-25892523)
chr3 (131-182)||(27505320-27505371)
chr3 (131-182)||(55401144-55401195)
chr3 (135-181)||(49651716-49651762)
chr3 (121-178)||(12100328-12100385)
chr3 (66-181)||(4704220-4704335)
chr3 (131-179)||(4987222-4987270)
chr3 (58-181)||(8039764-8039886)
chr3 (58-102)||(13799512-13799556)
chr3 (133-181)||(20503536-20503584)
chr3 (58-94)||(21149075-21149111)
chr3 (58-102)||(34189435-34189479)
chr3 (133-181)||(40993275-40993323)
chr3 (58-113)||(14223849-14223904)
chr3 (131-182)||(17276796-17276847)
chr3 (62-113)||(21367289-21367340)
chr3 (58-109)||(25365470-25365521)
chr3 (58-113)||(34307776-34307831)
chr3 (131-181)||(11610578-11610628)
chr3 (132-182)||(16789584-16789634)
chr3 (131-181)||(18427018-18427068)
chr3 (131-181)||(25064987-25065037)
chr3 (131-181)||(35223007-35223057)
chr3 (131-181)||(41961579-41961629)
chr3 (59-180)||(1389835-1389956)
chr3 (140-181)||(3730108-3730149)
chr3 (131-180)||(14216972-14217021)
chr3 (131-180)||(14223101-14223150)
chr3 (131-180)||(15999951-16000000)
chr3 (58-91)||(16789668-16789701)
chr3 (53-94)||(30367634-30367675)
chr3 (58-103)||(49505160-49505205)
chr3 (58-181)||(9800048-9800170)
chr3 (145-181)||(21861658-21861694)
chr3 (58-102)||(32804547-32804591)
chr3 (58-102)||(40150578-40150622)
[»] chr4 (51 HSPs)
chr4 (58-181)||(31243476-31243599)
chr4 (58-177)||(20743210-20743329)
chr4 (58-168)||(32910559-32910669)
chr4 (61-181)||(17876166-17876285)
chr4 (58-181)||(24343515-24343632)
chr4 (58-182)||(7012074-7012198)
chr4 (58-181)||(3144587-3144703)
chr4 (121-181)||(53381530-53381590)
chr4 (58-181)||(19230241-19230360)
chr4 (131-181)||(19482748-19482798)
chr4 (58-181)||(39507059-39507170)
chr4 (58-181)||(18513175-18513292)
chr4 (131-181)||(23292926-23292976)
chr4 (131-180)||(3947702-3947751)
chr4 (108-181)||(10133755-10133828)
chr4 (133-181)||(29205539-29205587)
chr4 (60-166)||(944617-944717)
chr4 (59-142)||(6273953-6274036)
chr4 (135-182)||(12895213-12895260)
chr4 (70-113)||(23386166-23386209)
chr4 (58-180)||(30982808-30982929)
chr4 (138-181)||(40784029-40784072)
chr4 (127-181)||(16184896-16184950)
chr4 (131-181)||(22234819-22234869)
chr4 (36-101)||(47191001-47191066)
chr4 (133-181)||(715545-715593)
chr4 (133-181)||(752871-752919)
chr4 (58-102)||(5775365-5775409)
chr4 (58-181)||(11931288-11931410)
chr4 (58-106)||(34515877-34515925)
chr4 (59-99)||(49659533-49659573)
chr4 (58-101)||(5654599-5654642)
chr4 (131-178)||(28084593-28084640)
chr4 (34-101)||(36386219-36386286)
chr4 (57-95)||(2976701-2976739)
chr4 (58-96)||(10546156-10546194)
chr4 (131-181)||(34306744-34306794)
chr4 (131-181)||(35161105-35161155)
chr4 (59-101)||(46180944-46180986)
chr4 (57-94)||(8457932-8457969)
chr4 (121-178)||(46715416-46715473)
chr4 (130-182)||(941313-941365)
chr4 (50-78)||(6844674-6844702)
chr4 (133-181)||(11596297-11596345)
chr4 (58-102)||(14465301-14465345)
chr4 (131-179)||(22440559-22440607)
chr4 (58-101)||(30520444-30520488)
chr4 (58-102)||(33950144-33950188)
chr4 (133-181)||(35157925-35157973)
chr4 (133-181)||(40699887-40699935)
chr4 (58-110)||(53968554-53968606)
[»] chr2 (35 HSPs)
chr2 (60-181)||(11307934-11308053)
chr2 (58-181)||(10535685-10535810)
chr2 (45-125)||(25544476-25544556)
chr2 (58-180)||(23354582-23354703)
chr2 (58-179)||(23354926-23355046)
chr2 (58-168)||(24011044-24011148)
chr2 (58-181)||(30563417-30563540)
chr2 (58-181)||(38919214-38919336)
chr2 (127-181)||(37419819-37419873)
chr2 (133-181)||(18622673-18622721)
chr2 (133-181)||(18840953-18841001)
chr2 (131-181)||(37559046-37559096)
chr2 (58-102)||(34006998-34007042)
chr2 (58-101)||(12748692-12748735)
chr2 (133-179)||(2438661-2438707)
chr2 (131-181)||(26769591-26769641)
chr2 (131-181)||(38117099-38117149)
chr2 (27-180)||(44860297-44860449)
chr2 (58-103)||(18570980-18571025)
chr2 (50-95)||(22085004-22085049)
chr2 (131-182)||(42511321-42511372)
chr2 (64-102)||(8300226-8300264)
chr2 (131-181)||(15972942-15972992)
chr2 (58-96)||(36281693-36281731)
chr2 (131-181)||(41843515-41843565)
chr2 (132-181)||(15909570-15909619)
chr2 (133-182)||(19980746-19980795)
chr2 (58-103)||(27286298-27286343)
chr2 (131-180)||(28596538-28596587)
chr2 (132-181)||(34993922-34993971)
chr2 (58-102)||(4229415-4229459)
chr2 (133-181)||(11223793-11223841)
chr2 (58-102)||(12668430-12668474)
chr2 (58-102)||(18889598-18889642)
chr2 (67-111)||(30394474-30394518)
[»] chr8 (43 HSPs)
chr8 (58-179)||(44067524-44067644)
chr8 (34-181)||(40063935-40064081)
chr8 (40-180)||(13009423-13009562)
chr8 (58-138)||(13845242-13845322)
chr8 (130-181)||(29510233-29510284)
chr8 (58-109)||(35431140-35431191)
chr8 (58-182)||(39820437-39820548)
chr8 (58-107)||(28883880-28883929)
chr8 (121-181)||(38487157-38487217)
chr8 (58-109)||(1676720-1676771)
chr8 (132-182)||(22652057-22652107)
chr8 (58-103)||(3025559-3025604)
chr8 (132-181)||(30067968-30068017)
chr8 (131-179)||(926730-926778)
chr8 (58-138)||(18130504-18130583)
chr8 (130-182)||(36450693-36450745)
chr8 (135-182)||(15816057-15816104)
chr8 (60-107)||(22850354-22850401)
chr8 (57-96)||(29198492-29198531)
chr8 (49-100)||(30068037-30068088)
chr8 (130-180)||(2035816-2035866)
chr8 (58-112)||(8017494-8017548)
chr8 (131-181)||(8343396-8343446)
chr8 (135-181)||(11944749-11944795)
chr8 (58-96)||(12559119-12559157)
chr8 (58-159)||(14513130-14513225)
chr8 (139-181)||(16641909-16641951)
chr8 (62-116)||(26609758-26609812)
chr8 (132-181)||(8343037-8343086)
chr8 (112-181)||(9402046-9402115)
chr8 (108-177)||(14659639-14659708)
chr8 (136-181)||(17751730-17751775)
chr8 (136-181)||(17760717-17760762)
chr8 (131-168)||(22943302-22943339)
chr8 (109-182)||(24413498-24413570)
chr8 (64-113)||(26915236-26915285)
chr8 (133-181)||(3454578-3454626)
chr8 (133-181)||(13403177-13403225)
chr8 (58-102)||(13844603-13844647)
chr8 (139-179)||(16987990-16988030)
chr8 (57-93)||(28810335-28810371)
chr8 (138-182)||(34127171-34127215)
chr8 (58-102)||(34897093-34897137)
[»] chr5 (41 HSPs)
chr5 (45-183)||(2419852-2419988)
chr5 (50-113)||(43554521-43554584)
chr5 (59-113)||(39695995-39696049)
chr5 (64-181)||(26205694-26205805)
chr5 (57-107)||(31264445-31264495)
chr5 (132-181)||(17393305-17393354)
chr5 (58-114)||(5467973-5468029)
chr5 (133-181)||(38464313-38464361)
chr5 (131-182)||(2436980-2437031)
chr5 (131-182)||(17593662-17593713)
chr5 (58-96)||(2577193-2577231)
chr5 (131-181)||(14873591-14873641)
chr5 (58-112)||(18607094-18607148)
chr5 (58-100)||(21577117-21577159)
chr5 (58-107)||(18288053-18288102)
chr5 (57-110)||(21137696-21137749)
chr5 (131-184)||(21576682-21576735)
chr5 (57-102)||(28588681-28588726)
chr5 (58-99)||(42469229-42469270)
chr5 (133-181)||(19820328-19820376)
chr5 (131-179)||(21190998-21191046)
chr5 (58-181)||(30098334-30098456)
chr5 (58-181)||(39698549-39698671)
chr5 (38-101)||(6471897-6471960)
chr5 (58-101)||(19293431-19293474)
chr5 (58-113)||(25863212-25863267)
chr5 (134-181)||(37328775-37328822)
chr5 (121-179)||(7997108-7997166)
chr5 (131-173)||(17088360-17088402)
chr5 (131-181)||(35017112-35017162)
chr5 (132-178)||(39268541-39268587)
chr5 (58-95)||(4344750-4344787)
chr5 (133-182)||(7677787-7677836)
chr5 (58-95)||(11596469-11596506)
chr5 (132-181)||(43564951-43565000)
chr5 (58-102)||(2548395-2548439)
chr5 (133-181)||(17123119-17123166)
chr5 (133-181)||(19552476-19552524)
chr5 (61-101)||(21194213-21194253)
chr5 (58-102)||(23015996-23016040)
chr5 (58-102)||(36838551-36838595)
[»] chr7 (41 HSPs)
chr7 (58-176)||(43250001-43250118)
chr7 (34-113)||(29812660-29812739)
chr7 (60-181)||(7133212-7133327)
chr7 (58-166)||(5938480-5938582)
chr7 (132-181)||(6490786-6490835)
chr7 (61-182)||(23930230-23930351)
chr7 (132-180)||(32287404-32287452)
chr7 (131-182)||(14729772-14729823)
chr7 (131-181)||(5409771-5409821)
chr7 (131-183)||(598277-598329)
chr7 (58-181)||(38804489-38804606)
chr7 (131-183)||(43027402-43027454)
chr7 (58-109)||(23751908-23751959)
chr7 (131-181)||(32093954-32094005)
chr7 (58-180)||(32308128-32308249)
chr7 (131-181)||(9778574-9778624)
chr7 (131-181)||(17852069-17852119)
chr7 (132-182)||(24105748-24105798)
chr7 (61-102)||(18233605-18233646)
chr7 (131-179)||(22868116-22868164)
chr7 (58-181)||(24339650-24339772)
chr7 (58-102)||(38134413-38134457)
chr7 (135-178)||(2533761-2533804)
chr7 (58-113)||(4017790-4017845)
chr7 (58-109)||(12278843-12278894)
chr7 (45-92)||(16341491-16341538)
chr7 (58-113)||(17780080-17780135)
chr7 (126-181)||(21138931-21138986)
chr7 (131-182)||(29763128-29763179)
chr7 (132-182)||(1433529-1433579)
chr7 (58-179)||(26033392-26033512)
chr7 (61-103)||(37775993-37776035)
chr7 (58-103)||(4909159-4909204)
chr7 (129-182)||(30813864-30813917)
chr7 (58-102)||(7328698-7328742)
chr7 (58-102)||(20427642-20427686)
chr7 (133-181)||(21880223-21880271)
chr7 (58-102)||(22683762-22683806)
chr7 (58-150)||(25239663-25239754)
chr7 (133-177)||(40287306-40287350)
chr7 (58-94)||(44172905-44172941)
[»] scaffold0007 (1 HSPs)
scaffold0007 (58-179)||(225199-225319)
[»] chr1 (52 HSPs)
chr1 (45-181)||(40747707-40747837)
chr1 (44-113)||(42004943-42005012)
chr1 (58-181)||(6936334-6936451)
chr1 (34-112)||(39101179-39101257)
chr1 (58-181)||(9828052-9828174)
chr1 (58-181)||(20157284-20157401)
chr1 (130-181)||(46940748-46940799)
chr1 (121-182)||(22794017-22794078)
chr1 (133-181)||(5944365-5944413)
chr1 (58-181)||(17831462-17831582)
chr1 (131-182)||(19562555-19562605)
chr1 (132-179)||(42359391-42359438)
chr1 (131-181)||(18190048-18190098)
chr1 (131-181)||(40917829-40917879)
chr1 (131-176)||(1209822-1209867)
chr1 (58-179)||(1486646-1486760)
chr1 (132-180)||(10233326-10233374)
chr1 (131-179)||(17778622-17778670)
chr1 (58-102)||(36878469-36878513)
chr1 (138-181)||(7918154-7918197)
chr1 (132-179)||(16297223-16297270)
chr1 (131-181)||(6427544-6427594)
chr1 (131-181)||(9690213-9690263)
chr1 (58-111)||(21145474-21145528)
chr1 (135-181)||(21365992-21366038)
chr1 (135-181)||(22515827-22515873)
chr1 (45-91)||(23440005-23440051)
chr1 (131-181)||(37598900-37598950)
chr1 (58-95)||(3921675-3921712)
chr1 (131-180)||(6414932-6414981)
chr1 (60-101)||(6573999-6574040)
chr1 (58-103)||(7918217-7918262)
chr1 (45-102)||(11412775-11412832)
chr1 (131-180)||(16011290-16011339)
chr1 (131-176)||(23219608-23219653)
chr1 (132-181)||(29144320-29144369)
chr1 (58-103)||(30847726-30847771)
chr1 (57-94)||(31667432-31667469)
chr1 (58-103)||(34712389-34712434)
chr1 (58-91)||(42325568-42325601)
chr1 (57-102)||(44296502-44296546)
chr1 (58-102)||(373055-373099)
chr1 (58-102)||(398772-398816)
chr1 (58-102)||(1864887-1864931)
chr1 (145-181)||(9630561-9630597)
chr1 (130-178)||(11634066-11634114)
chr1 (58-102)||(11634131-11634175)
chr1 (58-102)||(22794085-22794129)
chr1 (137-181)||(22881567-22881611)
chr1 (58-102)||(24176374-24176418)
chr1 (138-182)||(27965939-27965983)
chr1 (133-181)||(47989579-47989627)
[»] scaffold0652 (1 HSPs)
scaffold0652 (130-180)||(403-453)
[»] scaffold0049 (1 HSPs)
scaffold0049 (60-180)||(56932-57052)
[»] scaffold0598 (1 HSPs)
scaffold0598 (58-110)||(8052-8104)
[»] scaffold0128 (1 HSPs)
scaffold0128 (132-180)||(32774-32822)
[»] scaffold0199 (1 HSPs)
scaffold0199 (58-109)||(1957-2008)
[»] scaffold0003 (2 HSPs)
scaffold0003 (122-181)||(236914-236973)
scaffold0003 (131-181)||(241674-241724)
[»] scaffold0793 (1 HSPs)
scaffold0793 (133-181)||(4821-4869)
[»] scaffold0020 (1 HSPs)
scaffold0020 (131-181)||(135263-135313)
[»] scaffold0019 (1 HSPs)
scaffold0019 (131-181)||(71805-71855)
[»] scaffold0008 (1 HSPs)
scaffold0008 (58-179)||(263303-263423)
[»] scaffold0086 (1 HSPs)
scaffold0086 (109-182)||(2987-3059)
[»] scaffold0450 (1 HSPs)
scaffold0450 (109-181)||(8564-8635)
[»] scaffold0373 (1 HSPs)
scaffold0373 (50-78)||(1247-1275)
[»] scaffold0085 (1 HSPs)
scaffold0085 (58-102)||(26006-26050)


Alignment Details
Target: chr6 (Bit Score: 136; Significance: 4e-71; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 7 - 204
Target Start/End: Complemental strand, 30781396 - 30781210
Alignment:
Q  7 gaagcagagacacggacacgacaccaaacacgacacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgt 106  Q
    |||||| ||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30781396 gaagcacagacatggacacgacaccagacacgacacgaacactgacacgtgtaataatttgagaaaatgacataattaattgtaatcataggtgtcatgt 30781297  T
Q  107 cggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagccaaacacatcttcgattagaaa 204  Q
    |||||||| |||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30781296 cggtgtcaatatcagacact-----------gacaccgggacacacttaatccgaggagtgttcgtgcttcatagccaaacacatcttcgattagaaa 30781210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 34446573 - 34446690
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||     || |||| || |||| || ||||| ||||||||| ||||    
T  34446573 taataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtc-----ca-acaccgacgcgtatctgacactgggacacacctaat 34446666  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    || |||||||| ||||||||||||    
T  34446667 ccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 6389751 - 6389805
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgt 112  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  6389751 taataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgt 6389805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 8389543 - 8389411
Alignment:
Q  38 gacacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtcc 137  Q
    |||||||||||| ||||   ||||||||| ||||||| | |||||| |||||||| |||| ||||||||||||||| | | || |||| |     |||||    
T  8389543 gacacgaacacgtacactactaataatttaagaaaatcatataattcagtgtaattatag-tgtcatgtcggtgtcgg-acca-acacgg-----tgtcc 8389452  T
Q  138 gacaccgggacacacttaatccgaggagtgttcgtgcttca 178  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  8389451 gacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 31959220 - 31959268
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  31959220 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 34895085 - 34894967
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||| | | |||| |||||||||||||||||||     |||||| | || || ||| |||| |||||||||| ||||||||| ||||    
T  34895085 taataatttgagaaaattatacaattcagtgtaatcataggtgtca-----gtgtca-tgtcggaaactaatgcttgtccgacacagggacacacctaat 34894992  T
Q  158 ccgaggagtgttcgtgcttcatagc 182  Q
      ||||||||| |||||||||||||    
T  34894991 atgaggagtgtccgtgcttcatagc 34894967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 7625184 - 7625235
Alignment:
Q  130 gcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  7625184 gcgtgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatag 7625235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 17168514 - 17168459
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||| ||||||||||    
T  17168514 taataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtcggtgtc 17168459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 8776958 - 8776908
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  8776958 cgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 28152167 - 28152217
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||    
T  28152167 cgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 34595203 - 34595253
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  34595203 cgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 9107348 - 9107299
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  9107348 gtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 12235570 - 12235521
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtc 107  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  12235570 taataattagagaaaatgacataattcagtgtaatcataggtgtcgtgtc 12235521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 12086396 - 12086345
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcgg 109  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||| ||||||    
T  12086396 taataatttgagataatgacataattcagtttaatcataggtgtcgtgtcgg 12086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 19602232 - 19602177
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||||||||||||||||| |||||| ||||||||||||||| |  ||||||||||    
T  19602232 taataatttgagaaaatgatataattcagtgtaatcataggtattgtgtcggtgtc 19602177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 9195805 - 9195761
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtgtc 9195761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 32313463 - 32313535
Alignment:
Q  109 gtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||| || ||||||||||| |  ||||| |||||||||||||||||| ||||| | ||| ||||||||||||    
T  32313463 gtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 32313535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 3209471 - 3209518
Alignment:
Q  134 gtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||| |||||| | |||||||||||||||| |||||||||||    
T  3209471 gtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 7569219 - 7569176
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgt 101  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattataggtgt 7569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 9024225 - 9024182
Alignment:
Q  60 ataatttgagaaaatgacataattaagtgtaatcataggtgtca 103  Q
    |||||||||||||||||||||||| | |||||||||| ||||||    
T  9024225 ataatttgagaaaatgacataattcaatgtaatcatatgtgtca 9024182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 9025495 - 9025448
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttca 178  Q
    |||||||||||||||||||| | ||||||||| ||||| |||||||||    
T  9025495 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 9027236 - 9027287
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    ||||||||||||||||||||   |||||| ||||||||| ||||||||||||    
T  9027236 cgtgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcatagc 9027287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 16766777 - 16766828
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||||||||| | |||||||| || ||| |||||||||||||    
T  16766777 cgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatagc 16766828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 26247434 - 26247489
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||||||| ||||||||||||| || ||| ||||||||||| || ||||||||||    
T  26247434 taataatttaagaaaatgacatattttagtataatcataggtttcgtgtcggtgtc 26247489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 28715262 - 28715337
Alignment:
Q  18 acggacacg-acaccaaacacgacacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaat 92  Q
    ||||||||| |||||  |||||| ||| |||| ||||||  ||||||||||| |||||||||||||| ||||||||    
T  28715262 acggacacggacaccggacacgatacggacactgacacggctaataatttgaaaaaatgacataattcagtgtaat 28715337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 7938170 - 7938220
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    ||||||||||||| ||||| | | ||||||||||||| |||||||||||||    
T  7938170 gtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatagc 7938220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 8365498 - 8365448
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||| ||||||| | ||||||||||||| | ||||||||||||    
T  8365498 cgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 17327640 - 17327590
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||| ||||| ||||||| | ||||||||||||||| ||||||||||||    
T  17327640 cgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 34541801 - 34541747
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgt 112  Q
    |||||||| || ||||||||| |||| | |||||||||| |||||||||||||||    
T  34541801 taataattagaaaaaatgacaaaattcaatgtaatcatatgtgtcatgtcggtgt 34541747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 7248439 - 7248488
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||    |||||||||||||| ||||||||||||    
T  7248439 gtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 10339174 - 10339054
Alignment:
Q  61 taatttgagaaaatgacataattaagtgt-aatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatcc 159  Q
    |||||||||||||| |||||||| ||||| ||| ||| ||||||   | ||||| || || ||||| ||  | |||||||||| ||||||| | |||||     
T  10339174 taatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacac-gacacatgtccgacactgggacacgcctaatcg 10339076  T
Q  160 gaggagtgttcgtgcttcatag 181  Q
    ||||||||| ||||||||||||    
T  10339075 gaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 31384999 - 31385048
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    ||||||| |||||||||||| | |||||| |||||||| |||||||||||    
T  31384999 cgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 6299520 - 6299564
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||||| |||||| | |||||| |||||||||    
T  6299520 taataatttgagaaaatgatataattcaatgtaatgataggtgtc 6299564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 6306330 - 6306374
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||||| |||||| | |||||| |||||||||    
T  6306330 taataatttgagaaaatgatataattcaatgtaatgataggtgtc 6306374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 7086803 - 7086847
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtgtc 7086847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 7265644 - 7265600
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 7265600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 9025545 - 9025501
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 9025501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 10335435 - 10335391
Alignment:
Q  50 gacacgtgtaataatttgagaaaatgacataattaagtgtaatca 94  Q
    |||| ||||| ||||||||||||||||||||||| | ||||||||    
T  10335435 gacatgtgtagtaatttgagaaaatgacataattgaatgtaatca 10335391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 10842540 - 10842584
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||| ||||| |||||||| |||||||||||| |||||    
T  10842540 taataatttgaaaaaatcacataatttagtgtaatcatatgtgtc 10842584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 17841578 - 17841530
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    ||||||||||| | ||||| | ||||||||||||||| |||||||||||    
T  17841578 gtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 19040360 - 19040404
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  19040360 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 26178732 - 26178688
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||| ||||| |||||||| |||||||||||| |||||    
T  26178732 taataatttgataaaatcacataatttagtgtaatcatatgtgtc 26178688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 52369783 - 52369906
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||| |||||||| | |||||||||||||||| |||||||||| ||||| ||||| || |||||||| |||||||||||||| || |    
T  52369783 taataatttgagaaaattacataattcaatgtaatcataggtgtcgtgtcggtgtcggtatcggacaccgacgcgtgtccaacaccgggacacacctatt 52369882  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||| ||||||||||||    
T  52369883 ccgaggagtgtccgtgcttcatag 52369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 25074797 - 25074915
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||| |||||||||||||| ||  |||||||||| |      ||||  | ||||||||||||| ||||||||| ||||    
T  25074797 taataatttgagaaaatgacataattgagtgtaatcataggcgttgtgtcggtgtctg------acaccaacgcgtgtccgacactgggacacacctaat 25074890  T
Q  158 ccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||||||||||||||    
T  25074891 ccgaggagtgttcgtgcttcatagc 25074915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 21211296 - 21211413
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||| ||||| || |||||||| || |||||| |||||||||     || ||||| || ||||||||||||| ||||||| | ||||    
T  21211296 taataatttgagaaaattacatagttcagtgtaattatgggtgtcgtgtcggtgt-----tc-gacaccgacgcgtgtccgacactgggacactcctaat 21211389  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||| |||||||||||    
T  21211390 ccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 8903440 - 8903555
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||| ||||||||||||||||| ||| ||||||| ||||||||| ||||| || | |      ||||  |||||||||||||  |||||||||| ||||    
T  8903440 taatattttgagaaaatgacatattta-gtgtaattataggtgtcgtgtcgatgccgg------acacctatgcgtgtccgac--cgggacacacctaat 8903530  T
Q  158 ccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||||||||||||||    
T  8903531 ccgaggagtgttcgtgcttcatagc 8903555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 40052381 - 40052431
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  40052381 cgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 12704708 - 12704653
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||||||||| |||||||||||||| | |||||||||||||||| ||||||||||    
T  12704708 taataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtcggtgtc 12704653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 2408653 - 2408588
Alignment:
Q  118 tcagacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagcc 183  Q
    |||||||||||||||||| |||||||||||||| | |||||  |||||| | ||||||||||||||    
T  2408653 tcagacactgatgcgtgttcgacaccgggacacgcctaatctaaggagtctccgtgcttcatagcc 2408588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 3730216 - 3730167
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtc 107  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  3730216 taataatttgagataatgacataattcagtgtaatcataggtgtcgtgtc 3730167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 34185101 - 34185052
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  34185101 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 1830351 - 1830395
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||    
T  1830351 taataatttaagaaaatgacataattcagtgtaatcataggtgtc 1830395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 20691327 - 20691371
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||||||||||||||||||||||| |||||||||||| |||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtc 20691371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 24205092 - 24204983
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||  |||||||| ||| ||||| ||||||            ||||||| |||||||||||||| |||||| | ||||    
T  24205092 taataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcgg------------acactgacgcgtgtccgacaccaggacacgcctaat 24205005  T
Q  158 ccgaggagtgttcgtgcttcat 179  Q
     |||||||||| ||||||||||    
T  24205004 tcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 25775576 - 25775624
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  25775576 cgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 8039216 - 8039338
Alignment:
Q  60 ataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatc 158  Q
    |||||||||||||||| ||| ||| | ||||||||||||||||  ||| | ||||||| ||  | ||  | ||||||||||| ||||||||||| |||||    
T  8039216 ataatttgagaaaatggcatgattcaatgtaatcataggtgtcggtgttg-tgtcagtgtcgaatacaaacgcgtgtccgactccgggacacacctaatc 8039314  T
Q  159 cgaggagtgttcgtgcttcatagc 182  Q
    | |||||||||  |||||||||||    
T  8039315 caaggagtgtttatgcttcatagc 8039338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 15864841 - 15864892
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcgg 109  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||| ||||||    
T  15864841 taataatttgaaaaaatgatataatttagtgtaatcataggtgtcgtgtcgg 15864892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 25892468 - 25892523
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||| |||| |||||    
T  25892468 taataatttaagaaaatgatataattcagtgtaatcataggtgtcgtgtcagtgtc 25892523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 27505320 - 27505371
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||||||||  | ||||||||||||||| |||||||||||||    
T  27505320 cgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatagc 27505371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 55401144 - 55401195
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||| ||||| | ||||||||||||||| |||||||||||||    
T  55401144 cgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagc 55401195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 49651762 - 49651716
Alignment:
Q  135 tccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  49651762 tccgacaccgggacacacctaatccgagaagtgtccgtgcttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 12100328 - 12100385
Alignment:
Q  121 gacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttca 178  Q
    |||||| | ||||||||||||||||||||||| || |||||||||||  |||||||||    
T  12100328 gacactaacgcgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 12100385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 4704335 - 4704220
Alignment:
Q  66 tgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccgagga 164  Q
    |||||||||||||||||| |||||||||||| ||| || |||| ||||| || || |||||| | |||||||| ||||  |||||||  ||||| |||||    
T  4704335 tgagaaaatgacataattcagtgtaatcatatgtgccattgtc-gtgtcggtgtctgacactaacgcgtgtccaacactaggacacatctaatctgagga 4704237  T
Q  165 gtgttcgtgcttcatag 181  Q
     |||| |||| ||||||    
T  4704236 atgtttgtgcgtcatag 4704220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 4987270 - 4987222
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    |||||||||||||||||||| | ||||||||||||||| ||| ||||||    
T  4987270 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 8039886 - 8039764
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    ||||||||||||||||| | |||||| |||||||| ||| |||||  ||||| |||| || || |||| |||  | |||||||||||||||||| |||||    
T  8039886 taataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcg-tgtcggtgtcggaca-tgagacatgtccgacaccgggacacgcttaa 8039789  T
Q  157 tccgaggagtgttcgtgcttcatag 181  Q
    ||||| |||| |  |||||||||||    
T  8039788 tccgaagagtatctgtgcttcatag 8039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 13799512 - 13799556
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||| ||||||||||||||||||||||||||||| ||| |||||    
T  13799512 taatagtttgagaaaatgacataattaagtgtaataatatgtgtc 13799556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 20503536 - 20503584
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||| ||||||||||||| | ||||||||||||||| ||||||||||||    
T  20503536 tgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 21149075 - 21149111
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatca 94  Q
    |||||||||||||||||||||||||| ||||||||||    
T  21149075 taataatttgagaaaatgacataattcagtgtaatca 21149111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 34189435 - 34189479
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||    
T  34189435 taataatttgagaaaatgacatatttcagtgtaatcgtaggtgtc 34189479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 40993323 - 40993275
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||| | ||||||||||||||| | ||||||||||    
T  40993323 tgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 14223904 - 14223849
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    |||||||||||||||| || |||||| |||||| ||||| ||||| ||||||||||    
T  14223904 taataatttgagaaaacgatataatttagtgtattcataagtgtcgtgtcggtgtc 14223849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 17276796 - 17276847
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||| ||| ||| ||||||||| ||||| |||||||||||||    
T  17276796 cgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatagc 17276847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 21367289 - 21367340
Alignment:
Q  62 aatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    |||||||||||||||||||||| ||||||||||| | |||  ||||||||||    
T  21367289 aatttgagaaaatgacataatttagtgtaatcatggttgttgtgtcggtgtc 21367340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 25365470 - 25365521
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcgg 109  Q
    |||||||||||||| |||||||||||  ||||||||||| ||||| ||||||    
T  25365470 taataatttgagaatatgacataattcggtgtaatcataagtgtcgtgtcgg 25365521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 34307831 - 34307776
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||||||||||||||| ||||| || |||||||| ||| ||||| ||||||||||    
T  34307831 taataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtcggtgtc 34307776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 11610578 - 11610628
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||| |||||||| | ||||| ||||||||| ||||||||||||    
T  11610578 cgtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 16789634 - 16789584
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||| |||||||||| |||||| |||||||| | |||||||||||    
T  16789634 gtgtccgacaacgggacacacctaatcctaggagtgtccatgcttcatagc 16789584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 18427018 - 18427068
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||| ||||||||||||| ||||| ||||||||| |||| |||||||    
T  18427018 cgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 25064987 - 25065037
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||| |||||||||||||  || |||||||||||||||||||| |||||    
T  25064987 cgtgtctgacaccgggacacggtttatccgaggagtgttcgtgctccatag 25065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 35223007 - 35223057
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||| ||||| ||||||| ||| ||||||||||||| ||||||||||||    
T  35223007 cgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 41961629 - 41961579
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||| ||||||| | ||||||||| ||||| ||||||||||||    
T  41961629 cgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 1389835 - 1389956
Alignment:
Q  59 aataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatc 158  Q
    |||||||||| ||||| ||||||||   || ||||||| ||||| ||| || ||| || | ||| ||  ||| |||||||||||| |||||  | |||||    
T  1389835 aataatttgataaaatcacataattctatggaatcatacgtgtcgtgttggggtcggtgttagataccaatgtgtgtccgacaccaggacatgcctaatc 1389934  T
Q  159 cgaggagtgttcgtgcttcata 180  Q
    | |||||||| |||||||||||    
T  1389935 caaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 3730149 - 3730108
Alignment:
Q  140 caccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||| ||||||||||||||| | ||||||||||    
T  3730149 caccgggacacacctaatccgaggagtgtccatgcttcatag 3730108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 14216972 - 14217021
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    ||||| |||||| ||||||||| ||||||||| ||||| |||||||||||    
T  14216972 cgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 14223101 - 14223150
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    ||||| |||||| ||||||||| ||||||||| ||||| |||||||||||    
T  14223101 cgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 16000000 - 15999951
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    |||||||||||||||||||| | |||||| |||||||| ||||| |||||    
T  16000000 cgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 16789701 - 16789668
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaa 91  Q
    |||||||||||||||||||||||||| |||||||    
T  16789701 taataatttgagaaaatgacataattcagtgtaa 16789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 30367675 - 30367634
Alignment:
Q  53 acgtgtaataatttgagaaaatgacataattaagtgtaatca 94  Q
    |||||||||||||| |||||||||||||||| | ||||||||    
T  30367675 acgtgtaataatttaagaaaatgacataattgaatgtaatca 30367634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 49505205 - 49505160
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca 103  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgtca 49505160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 9800048 - 9800170
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc-atgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    ||||||||||||||||| ||||||||  |||||||  || |||||  |||| ||||| |||||||| | |||| |||||| |||||| |||||| | |||    
T  9800048 taataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtc-gtgtcggtatcagaga-tgatacgtgtcggacacctggacacgcctaa 9800145  T
Q  157 tccgaggagtgttcgtgcttcatag 181  Q
    || |||| || | ||||||||||||    
T  9800146 tcggaggcgtttccgtgcttcatag 9800170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 21861658 - 21861694
Alignment:
Q  145 ggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  21861658 ggacacacctaatccgaggagtgtccgtgcttcatag 21861694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 32804591 - 32804547
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 40150622 - 40150578
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||||| |||||| | |||||||||| |||||    
T  40150622 taataatttgagaaaatgatataattcaatgtaatcatatgtgtc 40150578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 6e-33; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 31243599 - 31243476
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  || || ||||| ||||||||| ||||||| |||||||| ||||    
T  31243599 taataatttgagaaaatgacataattcagtgtaatcataggtgtcatgtcggtgttggtgtcggacaccgatgcgtgttcgacaccaggacacacctaat 31243500  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
      |||||||||| ||| |||||||    
T  31243499 atgaggagtgtttgtggttcatag 31243476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 177
Target Start/End: Complemental strand, 20743329 - 20743210
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||| |||||||||||||||||  ||||||||||  | |||||||| ||  ||||||||||||||| |||||  ||||    
T  20743329 taataatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcgatgtcagacaccgacacgtgtccgacaccggaacacatctaat 20743230  T
Q  158 ccgaggagtgttcgtgcttc 177  Q
    |||| |||||| ||||||||    
T  20743229 ccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 32910559 - 32910669
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||| |||||||| || ||||| |||||||| || ||||  |||||||| ||||||||||||||  ||||| | ||||    
T  32910559 taataatttgagaaaatgacataattcagtgtaattatgggtgttatgtcggtatcggtattggacactgacgcgtgtccgacaccatgacacgcctaat 32910658  T
Q  158 ccgaggagtgt 168  Q
    |||||||||||    
T  32910659 ccgaggagtgt 32910669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 17876166 - 17876285
Alignment:
Q  61 taatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccg 160  Q
    |||||| |||||||||||||||| |||||||||||| ||| | |||| ||||| || |||||||| || || ||||||||||| |||||||| ||||||     
T  17876166 taattttagaaaatgacataatttagtgtaatcatatgtgccgtgtcagtgtc-gtgtcagacaccgacgcttgtccgacaccaggacacacctaatcca 17876264  T
Q  161 aggagtgttcgtgcttcatag 181  Q
    ||||||||  |||||||||||    
T  17876265 aggagtgtctgtgcttcatag 17876285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 24343515 - 24343632
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||      || ||||| || ||||||||||||||||||||| | || |    
T  24343515 taataatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggtg------tccgacaccgacgcgtgtccgacaccgggacacgcctatt 24343608  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    | ||||||||| ||||||||||||    
T  24343609 ctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 7012074 - 7012198
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc-atgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    |||||||||||||||||||||||||| ||||| ||||||||| ||  |||  ||||| || || ||||| || |||| ||||||||||||  |||| |||    
T  7012074 taataatttgagaaaatgacataattcagtgtgatcataggtatcggtgt-tgtgtcggtgtcggacaccgacgcgtatccgacaccggggaacacctaa 7012172  T
Q  157 tccgaggagtgttcgtgcttcatagc 182  Q
    | |||||||||| |||||||||||||    
T  7012173 tgcgaggagtgtccgtgcttcatagc 7012198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 3144703 - 3144587
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||| ||||||||      ||||||||  | |||||||| ||| || ||||||| ||||    
T  3144703 taataatttcagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtg------tcagacaccaacgcgtgtccaaca-cgagacacacctaat 3144611  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    ||||| ||||| ||||||||||||    
T  3144610 ccgagaagtgtccgtgcttcatag 3144587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 53381590 - 53381530
Alignment:
Q  121 gacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||| |||| |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  53381590 gacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 19230360 - 19230241
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||| |||||||| | |||||| ||||||||| |    ||||| || |||||||| ||||||||| ||||| | |||||||  ||||    
T  19230360 taataatttgagaaaataacataattcaatgtaattataggtgtcgt----gtgtcggtgtcagacacggatgcgtgttcgacaacaggacacatctaat 19230265  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    |||| |||||| ||| ||||||||    
T  19230264 ccgaagagtgtccgtacttcatag 19230241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 19482748 - 19482798
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  19482748 cgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 39507170 - 39507059
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||  |||||||| |||||||||||||||||||||||| |||||||            |||||||| |||||||||||||| ||||||| || |    
T  39507170 taataatttatgaaaatgatataattaagtgtaatcataggtgttatgtcgg------------acactgatacgtgtccgacaccgagacacacctatt 39507083  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||  ||||||||||    
T  39507082 ccgaggagtgttactgcttcatag 39507059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 18513292 - 18513175
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||     ||||  || || ||||| || | |||||||||||| |||||| | ||||    
T  18513292 taataatttgagaaaatgacataattcaatgtaatcatatgtgtca-----gtgt-tgtgtcggacaccgacgtgtgtccgacaccaggacacgcctaat 18513199  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    | ||||||||| ||||||||||||    
T  18513198 ctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 23292976 - 23292926
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  23292976 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 3947751 - 3947702
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  3947751 cgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 10133755 - 10133828
Alignment:
Q  108 ggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||| || ||||||||||| |||||||||||||| |||||||| ||||| |||||  |||| ||||||||||    
T  10133755 ggtgtcggtgtcagacactgacgcgtgtccgacaccaggacacacctaatctgaggaacgttcatgcttcatag 10133828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 29205539 - 29205587
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  29205539 tgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 944717 - 944617
Alignment:
Q  60 ataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatcc 159  Q
    ||||||||||| ||||||  |||| |||||||| |||||||||      |||||||| ||  |||| || ||||||||||||||||||||||| |||||     
T  944717 ataatttgagataatgacgcaatttagtgtaattataggtgtc------gtgtcagtgtcgaacacagacgcgtgtccgacaccgggacacacctaatct 944624  T
Q  160 gaggagt 166  Q
    |||||||    
T  944623 gaggagt 944617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 142
Target Start/End: Original strand, 6273953 - 6274036
Alignment:
Q  59 aataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacac 142  Q
    |||||||||||||||||| |||||| |||||||| ||||  ||| |||||||||| || |||||||  || || ||||||||||    
T  6273953 aataatttgagaaaatgatataatttagtgtaattatagtcgtcgtgtcggtgtcggtgtcagacatcgacgcatgtccgacac 6274036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 12895260 - 12895213
Alignment:
Q  135 tccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    ||||||| |||||||| | |||||||||||||||||||||||||||||    
T  12895260 tccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatagc 12895213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 23386166 - 23386209
Alignment:
Q  70 aaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||||| |||||| |||||||||||||||||||||||||||||    
T  23386166 aaaatgatataatttagtgtaatcataggtgtcatgtcggtgtc 23386209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 180
Target Start/End: Complemental strand, 30982929 - 30982808
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    |||| |||||||||||| ||||| || |||||||| ||| |||||  ||||| |||| || |||||||| ||  |||||||||||||||||||| | |||    
T  30982929 taatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcg-tgtcggtgtcagacac-gacacgtgtccgacaccgggacacgcctaa 30982832  T
Q  157 tccgaggagtgttcgtgcttcata 180  Q
    ||| | |||||| |||||||||||    
T  30982831 tccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 40784029 - 40784072
Alignment:
Q  138 gacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttcatag 40784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 16184896 - 16184950
Alignment:
Q  127 gatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||| |||||||||| ||||||| | |||||||||||||||| |||||||||||    
T  16184896 gatgcctgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatag 16184950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 22234869 - 22234819
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  22234869 cgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 47191066 - 47191001
Alignment:
Q  36 acgacacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgt 101  Q
    |||||||| |||| |||| |  |||||||||| ||||||||||||||| ||||||||| |||||||    
T  47191066 acgacacggacaccgacatggataataatttgcgaaaatgacataatttagtgtaatcctaggtgt 47191001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 715593 - 715545
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||| ||||||| | ||||||||||||||| ||||||||||||    
T  715593 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 752919 - 752871
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||| ||||||| | ||||||||||||||| ||||||||||||    
T  752919 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 5775409 - 5775365
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtc 5775365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 11931288 - 11931410
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc-atgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    ||||||| ||| ||||| |||||||| |||||||  ||| ||||| |||||  |||| ||||| ||||| || || ||||||||||| |||||||| |||    
T  11931288 taataatatgaaaaaatcacataatttagtgtaaatatatgtgtcgatgtca-tgtcggtatc-gacaccgacgcatgtccgacaccaggacacacctaa 11931385  T
Q  157 tccgaggagtgttcgtgcttcatag 181  Q
    |||  ||||||| ||||||||||||    
T  11931386 tccatggagtgtccgtgcttcatag 11931410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 34515925 - 34515877
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgt 106  Q
    ||||||||  |||||||||||||||| ||||||| ||||||||||||||    
T  34515925 taataattcaagaaaatgacataattcagtgtaaacataggtgtcatgt 34515877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 49659573 - 49659533
Alignment:
Q  59 aataatttgagaaaatgacataattaagtgtaatcataggt 99  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  49659573 aataatttgagaaaatgatataatttagtgtaatcataggt 49659533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 5654642 - 5654599
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgt 101  Q
    |||||||||||||||||||||||||| | |||||||||| ||||    
T  5654642 taataatttgagaaaatgacataattcaatgtaatcatacgtgt 5654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 28084593 - 28084640
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttca 178  Q
    |||||||||||| ||||||| | ||||||||||||||| |||||||||    
T  28084593 cgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 36386286 - 36386219
Alignment:
Q  34 acacgacacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgt 101  Q
    ||||||||||||||| || ||   |||||||||||||||| ||||||||| |||||||| | ||||||    
T  36386286 acacgacacgaacaccgataccaataataatttgagaaaaggacataattcagtgtaattaaaggtgt 36386219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Original strand, 2976701 - 2976739
Alignment:
Q  57 gtaataatttgagaaaatgacataattaagtgtaatcat 95  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  2976701 gtaataatttgagaaaatgacataattgaatgtaatcat 2976739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 10546156 - 10546194
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcata 96  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  10546156 taataatttgagaaaatgacataattcaatgtaatcata 10546194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 34306794 - 34306744
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||| ||||| | ||||| ||||| ||||||||||||||||    
T  34306794 cgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 35161105 - 35161155
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||| |||||| ||||||||  ||||| ||||||||||||    
T  35161105 cgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 46180986 - 46180944
Alignment:
Q  59 aataatttgagaaaatgacataattaagtgtaatcataggtgt 101  Q
    |||||||||||||||| |||||||| |||||||||||| ||||    
T  46180986 aataatttgagaaaataacataattcagtgtaatcatatgtgt 46180944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 8457932 - 8457969
Alignment:
Q  57 gtaataatttgagaaaatgacataattaagtgtaatca 94  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  8457932 gtaataatttgagaaaatgacataattgaatgtaatca 8457969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 46715473 - 46715416
Alignment:
Q  121 gacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttca 178  Q
    |||||||  |||||||||||||||| |||    |||||||||||||||||||||||||    
T  46715473 gacactgccgcgtgtccgacaccggcacatgtctaatccgaggagtgttcgtgcttca 46715416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 941313 - 941365
Alignment:
Q  130 gcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||| | |||||||| |||||||| || ||| |||||||||||||    
T  941313 gcgtgtccgacatcaggacacacctaatccgaagactgtccgtgcttcatagc 941365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 6844702 - 6844674
Alignment:
Q  50 gacacgtgtaataatttgagaaaatgaca 78  Q
    |||||||||||||||||||||||||||||    
T  6844702 gacacgtgtaataatttgagaaaatgaca 6844674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 11596345 - 11596297
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||| |||||||| | ||||| ||||||||| ||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 14465345 - 14465301
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||||||||||||||||||||||| | | |||||||| |||||    
T  14465345 taataatttgagaaaatgacataattcaatttaatcatatgtgtc 14465301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 22440607 - 22440559
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    ||||||||||||  |||||| | ||||||||||||||| ||||||||||    
T  22440607 cgtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 30520488 - 30520444
Alignment:
Q  58 taataatttgagaaaa-tgacataattaagtgtaatcataggtgt 101  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||    
T  30520488 taataatttgaaaaaaatgacataattcagtgtaatcataggtgt 30520444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 33950144 - 33950188
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| | |||||||||| |||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtgtc 33950188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 35157973 - 35157925
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||| ||||||| |||| ||||||||||| ||||| ||||||||||||    
T  35157973 tgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 40699935 - 40699887
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||| |||||||  |||||| ||||||||| |||||||||||    
T  40699935 tgtccgacaccaggacacatgtaatcccaggagtgtttgtgcttcatag 40699887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 53968554 - 53968606
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggt 110  Q
    ||||||||| |||||||||||||||| ||||  ||||||| |||| |||||||    
T  53968554 taataatttaagaaaatgacataattcagtgatatcatagatgtcgtgtcggt 53968606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 11308053 - 11307934
Alignment:
Q  60 ataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatcc 159  Q
    ||||||||| |||||||||||||| |||||||||||||||||| |||||||||| || |  ||||| || ||||||||||||||  || |||||||||||    
T  11308053 ataatttgaaaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcggtgttggacaccgacgcgtgtccgacacc--gaaacacttaatcc 11307956  T
Q  160 gaggagtgttcgtgcttcatag 181  Q
    ||||||||| ||||||||||||    
T  11307955 gaggagtgtccgtgcttcatag 11307934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 10535810 - 10535685
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtg--tcagtatcagacactgatgcgtgtccgacaccgggacacactta 155  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||   |||| || |||||| ||| ||||| |||||| |||||| | ||    
T  10535810 taataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgttggtgacacagtgtccgacactaatgtgtgtctgacaccaggacacgccta 10535711  T
Q  156 atccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||||||||||||||    
T  10535710 atccgaggagtgttcgtgcttcatag 10535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 25544476 - 25544556
Alignment:
Q  45 acacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacac 125  Q
    |||| ||||||| ||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| ||||||||    
T  25544476 acaccgacacgtataataatttgagaaaatgatataattcagtgtaatcataggtgtcgtgtcggtgtcagtgtcagacac 25544556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 180
Target Start/End: Complemental strand, 23354703 - 23354582
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| |  || ||||| ||   ||||| |||| |||||||| | ||||    
T  23354703 taataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcggggtcggacaccgaccggtgtctgaca-cgggacacgcctaat 23354605  T
Q  158 ccgaggagtgttcgtgcttcata 180  Q
    ||||||||||| |||| ||||||    
T  23354604 ccgaggagtgtccgtggttcata 23354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 23355046 - 23354926
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||| |  |  ||||| ||  |||||| |||| |||||||| | ||||    
T  23355046 taataatttgagaaaatgatataatttagtgcaatcataggtgtcatgtcggtgtcggggttggacaccgacccgtgtctgaca-cgggacacgcctaat 23354948  T
Q  158 ccgaggagtgttcgtgcttcat 179  Q
    ||||||||||| | ||||||||    
T  23354947 ccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 24011044 - 24011148
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||      || || || |||||||||||||||||  ||||||| ||||    
T  24011044 taataatttgagaaaatgacataatttagtgtaatcataggtgtcgcgtcggtg------tctgatacggatgcgtgtccgacaccaagacacacataat 24011137  T
Q  158 ccgaggagtgt 168  Q
    |||| ||||||    
T  24011138 ccgaagagtgt 24011148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 30563417 - 30563540
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||| | |||||  ||||||||  ||||||||||||| || |||||  | |||| ||||||||| |||||  | ||||    
T  30563417 taataatttgagaaaatgacataattcaatgtaactataggtgttgtgtcggtgtcagtgtcggacacccaggcgtatccgacaccaggacaaccctaat 30563516  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    || ||||||  | |||||||||||    
T  30563517 ccaaggagtacttgtgcttcatag 30563540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 38919214 - 38919336
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||||  ||| || |||||||||||||||||| |||  ||||| || || || |||||||||||||||||| | ||||||   ||||    
T  38919214 taataatttgagaaaatgttatagtttagtgtaatcataggtgtcgtgttagtgtcggtgtcggatactgatgcgtgtccgaca-caggacacgtctaat 38919312  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    | || ||||||| |||||||||||    
T  38919313 ctgaagagtgtttgtgcttcatag 38919336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 37419819 - 37419873
Alignment:
Q  127 gatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  37419819 gatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 18622673 - 18622721
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  18622673 tgtcctacaccgggacacacttaatccgaggagtgtccgtgcttcatag 18622721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 18841001 - 18840953
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  18841001 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 37559046 - 37559096
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  37559046 cgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 34007042 - 34006998
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||    
T  34007042 taataatttgagaaattgacataattcagtgtaatcataggtgtc 34006998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 12748692 - 12748735
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgt 101  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  12748692 taataatttgagaaaatgacatagttcagtgtaatcataggtgt 12748735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 2438707 - 2438661
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||    
T  2438707 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 26769591 - 26769641
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||| ||||||| | ||||||||||||||| ||||||||||||    
T  26769591 cgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 38117149 - 38117099
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| | |||||||||| |||| ||||||||||||    
T  38117149 cgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 44860297 - 44860449
Alignment:
Q  27 acaccaaacacgacacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacac 125  Q
    |||||| |||||||||| |||| |||||   |||||||||||||||||  ||||||| |||||||| ||| |||||  ||||| |||  || |  |||||    
T  44860297 acaccagacacgacacggacactgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcg-tgttggtgttggacac 44860395  T
Q  126 tgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
     ||   |||||||||| |||||||||| |||| |||||||||| |||||||||||    
T  44860396 -gacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 18570980 - 18571025
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca 103  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||    
T  18570980 taataatttgagaaaatgacataattcaatgtaatcatatgtgtca 18571025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 22085004 - 22085049
Alignment:
Q  50 gacacgtgtaataatttgagaaaatgacataattaagtgtaatcat 95  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||    
T  22085004 gacacgtataataatttaagaaaatgacataatttagtgtaatcat 22085049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 42511372 - 42511321
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||| |||||||   ||||||||||||||| |||||||||||||    
T  42511372 cgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatagc 42511321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 8300264 - 8300226
Alignment:
Q  64 tttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  8300264 tttgagaaaatgacataatttagtgtaatcataagtgtc 8300226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 15972942 - 15972992
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||| ||||||||||| |||||||| || ||| ||||||||||||    
T  15972942 cgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Original strand, 36281693 - 36281731
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcata 96  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcata 36281731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 41843515 - 41843565
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||| ||||||| ||| |||||||||||||  |||||||||||    
T  41843515 cgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcatag 41843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 15909619 - 15909570
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||| ||||||| | |||| ||| |||||||||||||||||||    
T  15909619 gtgtccgacacagggacacgcctaattcgaagagtgttcgtgcttcatag 15909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 19980746 - 19980795
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    ||||||||| || ||||||| ||||||||| ||||||| |||||||||||    
T  19980746 tgtccgacatcgagacacacctaatccgagaagtgttcatgcttcatagc 19980795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 27286343 - 27286298
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca 103  Q
    ||||||||||| || || ||||||||||||||||| ||||||||||    
T  27286343 taataatttgataagatcacataattaagtgtaattataggtgtca 27286298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 28596538 - 28596587
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    ||||||||||||  |||||| | ||||||||||||||| |||||||||||    
T  28596538 cgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 34993971 - 34993922
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||| ||||||| | |||| | |||||||||||||||||||||    
T  34993971 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatag 34993922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 4229459 - 4229415
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||| ||| |||||||||||| |||||||||||| |||||    
T  4229459 taataatttaagagaatgacataattcagtgtaatcatatgtgtc 4229415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 11223841 - 11223793
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||| ||||||||||||| | ||||| ||||||||| ||||||||||||    
T  11223841 tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 12668474 - 12668430
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||| |||||||||||||| |||||||| ||| |||||    
T  12668474 taataatttgaaaaaatgacataattcagtgtaattataagtgtc 12668430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 18889642 - 18889598
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||| |||||||||| |||||||| |||||||||||| |||||    
T  18889642 taataaattgagaaaatcacataattcagtgtaatcatatgtgtc 18889598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 30394474 - 30394518
Alignment:
Q  67 gagaaaatgacataattaagtgtaatcataggtgtcatgtcggtg 111  Q
    ||||||||||||||||| ||| |||||||||||||| ||| ||||    
T  30394474 gagaaaatgacataattcagtataatcataggtgtcctgttggtg 30394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 2e-29; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 58 - 179
Target Start/End: Original strand, 44067524 - 44067644
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||  |||||||| ||| ||||| |||||||||| || || ||||||||||||||||||||||| |||||| | ||||    
T  44067524 taataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtc-gtgtcggacactgatgcgtgtccgacaccaggacacgcctaat 44067622  T
Q  158 ccgaggagtgttcgtgcttcat 179  Q
     |||||||||| ||||||||||    
T  44067623 tcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 40063935 - 40064081
Alignment:
Q  34 acacgacacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatca-gacactgatgcg 132  Q
    |||||||||| |||| |||||   |||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||   | || | | | || | |    
T  40063935 acacgacacggacaccgacaccaataataatttgagaaaatgacataattcattgtaatcataggcgtcgtgtcggtgtc--caacacgtcgccgacgtg 40064032  T
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||  ||||||||||||||| |||||| |||||    
T  40064033 tgtccgacaccgggacacatctaatccgaggagtgtccgtgctacatag 40064081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 40 - 180
Target Start/End: Complemental strand, 13009562 - 13009423
Alignment:
Q  40 cacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccga 139  Q
    |||| |||| ||||||  ||||||||||||||||  | |||||| |||||||||||| ||||| |||||||||  || |||||||| || || |||||||    
T  13009562 cacggacaccgacacggataataatttgagaaaacaatataatttagtgtaatcataagtgtcgtgtcggtgtaggtgtcagacaccgacgcctgtccga 13009463  T
Q  140 caccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    || |||||||| | |||||| ||||| || |||||||||||    
T  13009462 ca-cgggacacgcctaatccaaggagcgtccgtgcttcata 13009423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 13845242 - 13845322
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccg 138  Q
    ||||||||||||||||||| |||||| || ||||||||||||||| |||| ||||| || || |||||||| |||||||||    
T  13845242 taataatttgagaaaatgatataatttagagtaatcataggtgtcgtgtctgtgtcggtgtcggacactgacgcgtgtccg 13845322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 29510284 - 29510233
Alignment:
Q  130 gcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  29510284 gcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 35431191 - 35431140
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcgg 109  Q
    ||||||||||||||||||||||| || |||||||||||||||||| ||||||    
T  35431191 taataatttgagaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 35431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 39820437 - 39820548
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| ||||||            |||| || ||||||||||||| ||||||| | ||||    
T  39820437 taataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcgg------------acaccgacgcgtgtccgacac-gggacacgcctaat 39820523  T
Q  158 ccgaggagtgttcgtgcttcatagc 182  Q
    ||||| ||||| |||||||||||||    
T  39820524 ccgagaagtgtccgtgcttcatagc 39820548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 28883929 - 28883880
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtc 107  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  28883929 taataatttgagaaaatgacataattcagtggaatcataggtgtcttgtc 28883880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 38487217 - 38487157
Alignment:
Q  121 gacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||| || |||||||||||||| |||||||| |||||||||||||||  |||||||||||    
T  38487217 gacaccgacgcgtgtccgacacccggacacacataatccgaggagtgtctgtgcttcatag 38487157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 1676720 - 1676771
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcgg 109  Q
    |||||||||| |||||||||||| || |||||||||||||||||| ||||||    
T  1676720 taataatttgtgaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 1676771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 22652057 - 22652107
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||||||||   ||||||||||||||| |||||||||||||    
T  22652057 gtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagc 22652107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 3025559 - 3025604
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca 103  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtca 3025604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 30068017 - 30067968
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||| ||||||||| |||||||| |||||| ||||||||||||    
T  30068017 gtgtccgacactgggacacacctaatccgatgagtgtccgtgcttcatag 30067968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 926778 - 926730
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    |||||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  926778 cgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 18130583 - 18130504
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccg 138  Q
    |||||| |||||||||||| | |||||||||||| || ||||||||||| |||  ||||||||||||| ||  ||||||||    
T  18130583 taataagttgagaaaatgatacaattaagtgtaaccagaggtgtcatgttggt-acagtatcagacaccgacacgtgtccg 18130504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 36450745 - 36450693
Alignment:
Q  130 gcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||| |||||| | |||||||||||||||  ||||||||||||    
T  36450745 gcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatagc 36450693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 15816104 - 15816057
Alignment:
Q  135 tccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||||| | ||||||||| ||||| |||||||||||||    
T  15816104 tccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 15816057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 22850354 - 22850401
Alignment:
Q  60 ataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtc 107  Q
    |||||||||||||| ||||||||||| |||||| |||||| |||||||    
T  22850354 ataatttgagaaaaagacataattaaatgtaattataggtttcatgtc 22850401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 29198531 - 29198492
Alignment:
Q  57 gtaataatttgagaaaatgacataattaagtgtaatcata 96  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  29198531 gtaataatttgagaaaatgacataattcaatgtaatcata 29198492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 30068088 - 30068037
Alignment:
Q  49 ggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtg 100  Q
    |||||||  |||||||||||||||||||||||||| ||| ||||| ||||||    
T  30068088 ggacacggataataatttgagaaaatgacataattcagtataatcgtaggtg 30068037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 2035816 - 2035866
Alignment:
Q  130 gcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    |||||||||||||||||| |||| ||||||||| || || |||||||||||    
T  2035816 gcgtgtccgacaccgggagacacctaatccgagtagcgtccgtgcttcata 2035866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 8017494 - 8017548
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgt 112  Q
    ||||||| ||| |||||||||||||| ||||||||||||| |||| |||| ||||    
T  8017494 taataatatgaaaaaatgacataattgagtgtaatcatagatgtcgtgtcagtgt 8017548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 8343396 - 8343446
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| | |||||||| ||||||  |||||||||||    
T  8343396 cgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 11944749 - 11944795
Alignment:
Q  135 tccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||| ||||| | |||||||| |||||||||||||||||||    
T  11944749 tccgacaccgagacacgcctaatccgatgagtgttcgtgcttcatag 11944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 12559157 - 12559119
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcata 96  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  12559157 taataatttgagaaaatgatataattcagtgtaatcata 12559119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 159
Target Start/End: Complemental strand, 14513225 - 14513130
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||| |||||||| || |||||||||| | |  ||||||||      |||||||| || || ||||||||||||| |||||| ||||    
T  14513225 taataatttgagaaaattacataattcagcgtaatcatagatttggtgtcggtg------tcagacaccgacgcatgtccgacaccggaacacacctaat 14513132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 16641951 - 16641909
Alignment:
Q  139 acaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||| |||||||||||||||  |||||||||||    
T  16641951 acaccgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 26609812 - 26609758
Alignment:
Q  62 aatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagt 116  Q
    ||||||| ||||||| |||| | |||||||| ||||||| |||||||||||||||    
T  26609812 aatttgaaaaaatgatataactcagtgtaattataggtgacatgtcggtgtcagt 26609758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 8343037 - 8343086
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||||||| | |||||||| ||||||  |||||||||||    
T  8343037 gtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 9402046 - 9402115
Alignment:
Q  112 tcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||| |||||| ||||||||| |||||||||   ||| || |||| ||||||||||||||| |||||||    
T  9402046 tcagtgtcagacgctgatgcgtatccgacacctaaacatacataattcgaggagtgttcgtgtttcatag 9402115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 14659708 - 14659639
Alignment:
Q  108 ggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttc 177  Q
    |||||| || ||||||||  | |||||||| |||||| ||||||| ||||| |||||| |||||||||||    
T  14659708 ggtgtcggtgtcagacaccaacgcgtgtccaacaccgagacacacctaatctgaggagagttcgtgcttc 14659639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 17751730 - 17751775
Alignment:
Q  136 ccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||| | ||||||||||||||| || |||||||||    
T  17751730 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 17760717 - 17760762
Alignment:
Q  136 ccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||| | ||||||||||||||| || |||||||||    
T  17760717 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 22943339 - 22943302
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgt 168  Q
    |||||||||||||||||||| | |||||||||||||||    
T  22943339 cgtgtccgacaccgggacacgcctaatccgaggagtgt 22943302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 24413570 - 24413498
Alignment:
Q  109 gtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||| || ||||| ||||||||||| ||| ||||||||   ||||||||| ||||| |||||||||||||    
T  24413570 gtgtcagtgtcggacac-gatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcatagc 24413498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 26915285 - 26915236
Alignment:
Q  64 tttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    |||||||||||||||||||| | |||||||| | ||||| ||||||||||    
T  26915285 tttgagaaaatgacataatttaatgtaatcacaagtgtcgtgtcggtgtc 26915236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 3454578 - 3454626
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||  ||||| |||||||||| |||||| |||||||||||    
T  3454578 tgtccgacaccgaaacacatttaatccgagaagtgtttgtgcttcatag 3454626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 13403177 - 13403225
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||| ||||| |||||| | |||||||| ||||||||||||    
T  13403177 tgtccgacaccgagacacgcttaattcaaggagtgtccgtgcttcatag 13403225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 13844647 - 13844603
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtgtc 13844603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 16987990 - 16988030
Alignment:
Q  139 acaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    |||||||||||| | ||||||||||||||| ||||||||||    
T  16987990 acaccgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 28810371 - 28810335
Alignment:
Q  57 gtaataatttgagaaaatgacataattaagtgtaatc 93  Q
    |||||||| |||||||||||||||||||| |||||||    
T  28810371 gtaataatgtgagaaaatgacataattaaatgtaatc 28810335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 34127215 - 34127171
Alignment:
Q  138 gacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||| |||||||| |||||| |||||||| |||||||||||||    
T  34127215 gacacctggacacacctaatccaaggagtgtccgtgcttcatagc 34127171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 34897093 - 34897137
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  34897093 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 34897137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 45 - 183
Target Start/End: Original strand, 2419852 - 2419988
Alignment:
Q  45 acacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccg 144  Q
    ||||||||||   ||||||||||||||||| ||| |||| |||||||||||  ||||||   | ||||  || |||||||| |||||||||||||| |||    
T  2419852 acacggacactgataataatttgagaaaattacacaattcagtgtaatcat--gtgtcagtgccgtgttggtgtcagacaccgatgcgtgtccgaccccg 2419949  T
Q  145 ggacacacttaatccgaggagtgttcgtgcttcatagcc 183  Q
    |||||||| |||||||| |||||| ||||||||||||||    
T  2419950 ggacacacctaatccgatgagtgtccgtgcttcatagcc 2419988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 43554521 - 43554584
Alignment:
Q  50 gacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||    
T  43554521 gacacgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtc 43554584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 39696049 - 39695995
Alignment:
Q  59 aataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||    
T  39696049 aataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtc 39695995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 181
Target Start/End: Complemental strand, 26205805 - 26205694
Alignment:
Q  64 tttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccgagg 163  Q
    |||||||||||||||||||| |||||||||||||||||| ||| ||||      || |||||  | |||| |||||||||||||||||| |||||| |      
T  26205805 tttgagaaaatgacataattcagtgtaatcataggtgtcgtgttggtg------tcggacaccaacgcgtatccgacaccgggacacacgtaatccaaaa 26205712  T
Q  164 agtgttcgtgcttcatag 181  Q
     |||| ||||||||||||    
T  26205711 ggtgtccgtgcttcatag 26205694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 31264445 - 31264495
Alignment:
Q  57 gtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtc 107  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||||    
T  31264445 gtaataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgtc 31264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 17393354 - 17393305
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  17393354 gtgtccgacaccgggacactcgtaatccgaggaatgttcgtgcttcatag 17393305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 5468029 - 5467973
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtca 114  Q
    ||||||||||| ||||| |||||||| |||||||| ||||||||| |||||||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattataggtgtcgtgtcggtgtca 5467973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 38464361 - 38464313
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 2436980 - 2437031
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||  ||||| | |||||||||||||||||||||||||||||    
T  2436980 cgtgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcatagc 2437031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 17593713 - 17593662
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    ||||||| |||||||||||| ||||||||||||||||| ||| |||||||||    
T  17593713 cgtgtccaacaccgggacacgcttaatccgaggagtgtccgtacttcatagc 17593662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 2577231 - 2577193
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcata 96  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  2577231 taataatttgagaaaatgacataatttagtgtaatcata 2577193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 14873591 - 14873641
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||| |||||||||||| | ||||||||||||||| ||||||||||||    
T  14873591 cgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 18607148 - 18607094
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgt 112  Q
    ||||||||||||||||| |||||||| | |||||||||||||||| |||| ||||    
T  18607148 taataatttgagaaaataacataattcaatgtaatcataggtgtcgtgtctgtgt 18607094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 21577159 - 21577117
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtg 100  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  21577159 taataatttgagaaaataacataattaagtgtaataataggtg 21577117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 18288102 - 18288053
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtc 107  Q
    |||||||||||||||||||| ||| | ||| |||||||||||||||||||    
T  18288102 taataatttgagaaaatgacttaactcagtataatcataggtgtcatgtc 18288053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 21137696 - 21137749
Alignment:
Q  57 gtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggt 110  Q
    |||||||| |||||||||||| ||||| |||| ||||||||||||| |||||||    
T  21137696 gtaataatctgagaaaatgacgtaattcagtgaaatcataggtgtcgtgtcggt 21137749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 21576735 - 21576682
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagcca 184  Q
    |||||| ||||| ||||||| | ||||||||||||||| |||||||||||||||    
T  21576735 cgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatagcca 21576682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 28588726 - 28588681
Alignment:
Q  57 gtaataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||||||||||||||| |||||||| |||||||| |||||||||    
T  28588726 gtaataatttgagaaaatcacataattcagtgtaattataggtgtc 28588681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 42469229 - 42469270
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggt 99  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  42469229 taataatttgagaaaatgacatattttagtgtaatcataggt 42469270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 19820376 - 19820328
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||| | ||||| ||||||||| ||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 21191046 - 21190998
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    |||||||||| ||||||||| | ||||||||||||||| ||||||||||    
T  21191046 cgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 30098334 - 30098456
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    ||||||||||||||||| |||||||| | |||||| |||| ||||  | |||  |||||| || ||||| ||  |||||| |||||| |||||||| |||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcga-gtcagtgtcggacac-gacacgtgtcagacaccaggacacacctaa 30098431  T
Q  157 tccgaggagtgttcgtgcttcatag 181  Q
    |||||||| ||| ||||||||||||    
T  30098432 tccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 39698549 - 39698671
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    ||||||||||| ||||| |||||||| |||||||| | | |||||| ||||| |||| || || ||||| ||   || |||||||||| ||||| | |||    
T  39698549 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg-tgtcggtgtcggacac-gacatgtatccgacaccgagacacgcctaa 39698646  T
Q  157 tccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||| ||||||||||||    
T  39698647 tccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 6471960 - 6471897
Alignment:
Q  38 gacacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgt 101  Q
    |||||| |||| ||||||  ||||||||||||||||| |||||||| |||||||| ||| ||||    
T  6471960 gacacggacactgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 19293474 - 19293431
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgt 101  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  19293474 taataatttaagaaaataacataattaagtgtaatcatatgtgt 19293431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 25863212 - 25863267
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||||||||||||||||| |||||| |||||||| ||| ||||| |||| |||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtcagtgtc 25863267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 37328822 - 37328775
Alignment:
Q  134 gtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||| ||||||| || ||||||||||||||||| ||||||||||||    
T  37328822 gtccgataccgggatacgcttaatccgaggagtgtccgtgcttcatag 37328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 7997166 - 7997108
Alignment:
Q  121 gacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    |||||||| |||||||||||| | |||||||| |||| |||| |||||| |||||||||    
T  7997166 gacactgacgcgtgtccgacatcaggacacacctaattcgagaagtgtttgtgcttcat 7997108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 17088360 - 17088402
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtg 173  Q
    |||||||||||||||||||| | ||||||||||||||| ||||    
T  17088360 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 35017112 - 35017162
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||| ||| |||||||| | ||||||||||||||| ||||||||||||    
T  35017112 cgtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 39268587 - 39268541
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttca 178  Q
    ||||||||||| ||||||| | ||||||||||||||| |||||||||    
T  39268587 gtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 4344750 - 4344787
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcat 95  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  4344750 taataatttgaaaaaatgacataattcagtgtaatcat 4344787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 7677787 - 7677836
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||||||| | |||||||||||| ||  ||||||||||||    
T  7677787 tgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatagc 7677836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 11596506 - 11596469
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcat 95  Q
    |||||||||||||||||||||||||| | |||||||||    
T  11596506 taataatttgagaaaatgacataattcaatgtaatcat 11596469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 43564951 - 43565000
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||| ||||||||| | ||||||||| ||||| ||||||||||||    
T  43564951 gtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 2548395 - 2548439
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||||| |||||||| |||||||| |||||||||||| |||||    
T  2548395 taataattagagaaaattacataattcagtgtaatcataagtgtc 2548439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 17123119 - 17123166
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||| ||||||| | ||||||||||||||| ||||||||||||    
T  17123119 tgtccgacac-gggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 19552524 - 19552476
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||  |||||||| ||||||||||||||| |||| |||||||    
T  19552524 tgtccgacacttggacacacctaatccgaggagtgtccgtgtttcatag 19552476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 21194253 - 21194213
Alignment:
Q  61 taatttgagaaaatgacataattaagtgtaatcataggtgt 101  Q
    |||||||||||||| |||||||| ||||||||||| |||||    
T  21194253 taatttgagaaaatcacataattcagtgtaatcattggtgt 21194213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 23016040 - 23015996
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||| |||||||||||| |||||||| |||||||| |||||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattataggtgtc 23015996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 36838551 - 36838595
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  36838551 taataatttgagaaaattacataatttagtgtaattatatgtgtc 36838595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 9e-23; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 43250001 - 43250118
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||  |||||||| ||| ||||| |||||||||| |  || |||||||| |||||||||||||| |||||| | ||||    
T  43250001 taataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtc-gcgtcggacactgacgcgtgtccgacaccaggacacgcctaat 43250099  T
Q  158 ccgaggagtgttcgtgctt 176  Q
     |||||||||| |||||||    
T  43250100 tcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 29812739 - 29812660
Alignment:
Q  34 acacgacacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    |||||||||| |||| ||| ||| ||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||    
T  29812739 acacgacacggacaccgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtc 29812660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 7133327 - 7133212
Alignment:
Q  60 ataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatcc 159  Q
    |||||||||||||||||||||||| ||||||||||||||||   ||||||||      || ||||| || ||||||||||||| ||||||||| |||||     
T  7133327 ataatttgagaaaatgacataattcagtgtaatcataggtggtgtgtcggtg------tcggacaccgacgcgtgtccgacactgggacacacctaatct 7133234  T
Q  160 gaggagtgttcgtgcttcatag 181  Q
    |||||| || ||||||||||||    
T  7133233 gaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 5938480 - 5938582
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||| ||||| |||||||| ||| |||| ||||||||  ||||||||||||      |||| ||||||||||||||||||| |||||| ||||    
T  5938480 taataatttgataaaataacataattcagtataattataggtgttgtgtcggtgtcag------acaccgatgcgtgtccgacaccggaacacacctaat 5938573  T
Q  158 ccgaggagt 166  Q
    | |||||||    
T  5938574 ctgaggagt 5938582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 6490786 - 6490835
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 182
Target Start/End: Original strand, 23930230 - 23930351
Alignment:
Q  61 taatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccggga------cacactt 154  Q
    ||||||||||||||||||||||| |||||||||||||||||  ||||||||      || || || |||||||||||||||||||||       |||| |    
T  23930230 taatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtg------tcggataccgatgcgtgtccgacaccgggatacacctacacct 23930323  T
Q  155 aatccgaggagtgttcgtgcttcatagc 182  Q
    |||||| ||||||| |||||||||||||    
T  23930324 aatccgtggagtgtccgtgcttcatagc 23930351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 32287452 - 32287404
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  32287452 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 14729772 - 14729823
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  14729772 cgtgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcatagc 14729823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 5409821 - 5409771
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  5409821 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 598277 - 598329
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagcc 183  Q
    |||||||||||||||||||| | ||||||||| ||||| ||||||||||||||    
T  598277 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagcc 598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 38804606 - 38804489
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||| |||||||||||||||  || ||||||||||||||| ||| ||||      || ||||| || | ||||||||| ||||||||  | ||||    
T  38804606 taataatttcagaaaatgacataatccagggtaatcataggtgtcgtgttggtg------tcggacaccgacgtgtgtccgacgccgggacatgcctaat 38804513  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||  |||||||||||    
T  38804512 ccgaggagtgtatgtgcttcatag 38804489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 43027454 - 43027402
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagcc 183  Q
    |||||||||||||||||||| | |||||||| |||||| ||||||||||||||    
T  43027454 cgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatagcc 43027402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 23751908 - 23751959
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcgg 109  Q
    ||||||||||| ||||||| |||||| |||||||||||||||||| ||||||    
T  23751908 taataatttgataaaatgatataatttagtgtaatcataggtgtcgtgtcgg 23751959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 32094005 - 32093954
Alignment:
Q  131 cgtgtccgacaccggg-acacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  32094005 cgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 180
Target Start/End: Original strand, 32308128 - 32308249
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    ||||||||||||||||| |||||||| ||||||||  || |||||| ||||| |||| || |  ||||| ||  | |||||||||||| ||||||  |||    
T  32308128 taataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcg-tgtcggtgttggacac-gacacatgtccgacaccgagacacagctaa 32308225  T
Q  157 tccgaggagtgttcgtgcttcata 180  Q
    |||||||||||||| |||||||||    
T  32308226 tccgaggagtgttcatgcttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 9778574 - 9778624
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| | |||||| |||||||| ||||||||||||    
T  9778574 cgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 17852069 - 17852119
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||| ||||||| |||| |||||||||| ||||||||||||    
T  17852069 cgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 24105748 - 24105798
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    ||||||||||||||||||| | ||| |||||||||||| ||||||||||||    
T  24105748 gtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatagc 24105798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 18233646 - 18233605
Alignment:
Q  61 taatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  18233646 taatttgagaaaatgacataattcagtgtaattataggtgtc 18233605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 22868116 - 22868164
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    |||||| ||||||||||||||| ||||||||||||||| | ||||||||    
T  22868116 cgtgtcagacaccgggacacacataatccgaggagtgtccatgcttcat 22868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 24339650 - 24339772
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    ||||||||||| ||||| |||||||| |||||||| | | |||||  ||||| |||| || || ||||| ||  ||| |||||||||||||||| | |||    
T  24339650 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg-tgtcggtgtcggacac-gacacgtatccgacaccgggacacgcctaa 24339747  T
Q  157 tccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||  ||||||||||||    
T  24339748 tccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 38134457 - 38134413
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||||||||||||||||||||||| | |||||||||| |||||    
T  38134457 taataatttgagaaaatgacataattcaatgtaatcatatgtgtc 38134413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 2533804 - 2533761
Alignment:
Q  135 tccgacaccgggacacacttaatccgaggagtgttcgtgcttca 178  Q
    |||||| ||||||||| | |||||||||||||||||||||||||    
T  2533804 tccgacgccgggacacgcgtaatccgaggagtgttcgtgcttca 2533761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 4017845 - 4017790
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    |||||||||||||||| || |||||| |||||||||||| ||||| ||| ||||||    
T  4017845 taataatttgagaaaacgatataatttagtgtaatcataagtgtcgtgttggtgtc 4017790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 12278843 - 12278894
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcgg 109  Q
    ||||||||| |||||||||||||||| |||||||| ||| ||||| ||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtgtcgtgtcgg 12278894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 16341491 - 16341538
Alignment:
Q  45 acacggacacgtgtaataatttgagaaaatgacataattaagtgtaat 92  Q
    ||||||||||   ||||||||||||||||| |||||||||||||||||    
T  16341491 acacggacactgataataatttgagaaaatcacataattaagtgtaat 16341538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 17780135 - 17780080
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||||||| ||||||||||||||||   |||||| ||||||||| ||||||||||    
T  17780135 taataatttaagaaaatgacataattctatgtaataataggtgtcgtgtcggtgtc 17780080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 21138986 - 21138931
Alignment:
Q  126 tgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||| ||||||||||||| |||||| |||||||   ||||||||||||||||||||    
T  21138986 tgatacgtgtccgacaccaggacacgcttaatcaagggagtgttcgtgcttcatag 21138931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 29763179 - 29763128
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    ||||||||||| | |||||| | ||||||||||||||| |||||||||||||    
T  29763179 cgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatagc 29763128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 1433529 - 1433579
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||| ||||||   ||||||||||||||| |||||||||||||    
T  1433529 gtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatagc 1433579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 26033512 - 26033392
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcg-gtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    ||||||||||| ||||| |||||||| |||||||| | | |||||  |||  ||||| || ||||||| |||  ||||||||| |||| ||||||| |||    
T  26033512 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg-gtctcgtgtcggtgtcagaca-tgacacgtgtccgataccgcgacacacctaa 26033415  T
Q  157 tccgaggagtgttcgtgcttcat 179  Q
    |||||||||||| |||| |||||    
T  26033414 tccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 37775993 - 37776035
Alignment:
Q  61 taatttgagaaaatgacataattaagtgtaatcataggtgtca 103  Q
    ||||||||||||||||||||||||| |||||||| | ||||||    
T  37775993 taatttgagaaaatgacataattaaatgtaatcacatgtgtca 37776035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 4909159 - 4909204
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca 103  Q
    ||||||||||||||||| |||||||| | |||||||||| ||||||    
T  4909159 taataatttgagaaaattacataattcattgtaatcatatgtgtca 4909204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 30813864 - 30813917
Alignment:
Q  129 tgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    ||||||||||||| | | |||| | ||||||||||||||| |||||||||||||    
T  30813864 tgcgtgtccgacatcagaacacgcctaatccgaggagtgtccgtgcttcatagc 30813917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 7328742 - 7328698
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtgtc 7328698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 20427686 - 20427642
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||||||||||| |||||||| |||| |||||||||| |||||    
T  20427686 taataatttgagaagatgacatatttaaatgtaatcatatgtgtc 20427642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 21880223 - 21880271
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||| |||||| | ||||||||| ||||| ||||||||||||    
T  21880223 tgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 22683806 - 22683762
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||||||||||| |||| |||||| |||| |||||||||||||    
T  22683806 taataatttgagaatatgatataattcagtgcaatcataggtgtc 22683762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 25239754 - 25239663
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacac 150  Q
    |||||||||||||||||   |||| | |||||||| |||||||||||||  ||||| || || |||| ||| | |||||||||||| ||||||    
T  25239754 taataatttgagaaaattttataactcagtgtaattataggtgtcatgt-tgtgtcggtgtcggacattgacgtgtgtccgacaccaggacac 25239663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 40287350 - 40287306
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttc 177  Q
    |||||||||||||||||  | ||||||||||||||| ||||||||    
T  40287350 tgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 44172941 - 44172905
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatca 94  Q
    |||||||||||||||||||||||||| | ||||||||    
T  44172941 taataatttgagaaaatgacataattcaatgtaatca 44172905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 225319 - 225199
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    |||||||||||||||||||||||||  | |||||| ||| ||||| ||| |||||| || || |||||||| |||||| ||||||| |||||| | ||||    
T  225319 taataatttgagaaaatgacataatacaatgtaattataagtgtcgtgttggtgtc-gtgtcggacactgacgcgtgttcgacaccaggacacgcctaat 225221  T
Q  158 ccgaggagtgttcgtgcttcat 179  Q
     |||||||||| ||||||||||    
T  225220 tcgaggagtgtccgtgcttcat 225199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 181
Target Start/End: Complemental strand, 40747837 - 40747707
Alignment:
Q  45 acacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccg 144  Q
    |||| ||||||  |||||||||||||||||||||||||| | |||||| ||||||||||||| ||||      || ||||| ||| | ||||| |||| |    
T  40747837 acaccgacacggataataatttgagaaaatgacataattcaatgtaattataggtgtcatgttggtg------tcggacaccgatccatgtcccacacag 40747744  T
Q  145 ggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||| | |||||||||||| || ||||||||||||    
T  40747743 ggacacccctaatccgaggagcgtccgtgcttcatag 40747707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 42005012 - 42004943
Alignment:
Q  44 aacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtc 113  Q
    ||||| ||||||  |||||||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  42005012 aacacagacacggataataatttgagaaaatgacataatttagtgtaatcataggtgttgtgtcggtgtc 42004943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 6936451 - 6936334
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||| |||||||||||||||||||||||||||||||||||||      ||||| || || ||||| || || | ||||||||| | | || ||||||    
T  6936451 taataatctgagaaaatgacataattaagtgtaatcataggtgtc------gtgtctgtgtcggacaccgacgcatatccgacaccagaatacccttaat 6936358  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||| | ||||||||||    
T  6936357 ccgaggagtgtccatgcttcatag 6936334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 39101257 - 39101179
Alignment:
Q  34 acacgacacgaacacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgt 112  Q
    |||||||||  |||| ||||| | ||||||||||||||||| ||||||||||||||||| ||||||||| | |||||||    
T  39101257 acacgacacagacaccgacacatataataatttgagaaaataacataattaagtgtaattataggtgtcgtttcggtgt 39101179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 9828052 - 9828174
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    ||||||||||| ||||| |||||||| ||||||||  || |||||  ||||| |||| || |||||||| ||  ||||||||||||||||||||   |||    
T  9828052 taataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcg-tgtccgtgtcagacac-gacacgtgtccgacaccgggacacgtctaa 9828149  T
Q  157 tccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||| ||||||||||||    
T  9828150 tccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 20157401 - 20157284
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||| ||||||||| |||||||| |||||||||||| |||||     |||||| || || ||||| || ||||||||||||||| ||||||| ||||    
T  20157401 taataatgtgagaaaatcacataattcagtgtaatcatatgtgtc-----ggtgtc-gtgtccgacaccgacgcgtgtccgacaccgagacacacctaat 20157308  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
      ||||||| | ||||||||||||    
T  20157307 ttgaggagtatccgtgcttcatag 20157284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 46940799 - 46940748
Alignment:
Q  130 gcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  46940799 gcgtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 22794078 - 22794017
Alignment:
Q  121 gacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||| || |||||||| ||||||||||| |||| |||||||||| |||||||||||||    
T  22794078 gacactgacgcatgtccgactccgggacacacctaattcgaggagtgtacgtgcttcatagc 22794017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 5944365 - 5944413
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||| || | ||||||||||||||||||||||||||||    
T  5944365 tgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 181
Target Start/End: Complemental strand, 17831582 - 17831462
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||||||||| |||| ||| |||||||||||| |||||  ||| |||||||| || ||||| ||   ||||||||||||||||||| | ||||    
T  17831582 taataatttgagaaaatcacattattcagtgtaatcatatgtgtc--gtc-gtgtcagtgtcggacaccgacatgtgtccgacaccgggacacgcctaat 17831486  T
Q  158 ccgaggagtgttcgtgcttcatag 181  Q
    |  |||||||| | || |||||||    
T  17831485 cttaggagtgtccatgtttcatag 17831462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 19562605 - 19562555
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  19562605 cgtgtccgacacagggacacacctaatccgaggagtg-tcgtgcttcatagc 19562555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 42359438 - 42359391
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||    
T  42359438 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 18190098 - 18190048
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||||| |||||||||||||||  | |||||||||    
T  18190098 cgtgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 40917829 - 40917879
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| | ||||||||||| ||| ||||||||||||    
T  40917829 cgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 1209822 - 1209867
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgctt 176  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||    
T  1209822 cgtgtccgacaccaggacacacctaatccgagaagtgttcgtgctt 1209867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 1486760 - 1486646
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaat 157  Q
    ||||||||||| ||||| |||||||| |||||||| ||| |||||     |||||| || || ||||| ||  |||||||||||||||||||| | ||||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaattataagtgtc-----ggtgtc-gtgtcggacac-gacacgtgtccgacaccgggacacgcctaat 1486668  T
Q  158 ccgaggagtgttcgtgcttcat 179  Q
    |||||||||||  |||||||||    
T  1486667 ccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 10233326 - 10233374
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    |||||||||||| |||||||| ||||| ||||||||| |||||||||||    
T  10233326 gtgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 17778622 - 17778670
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    |||||||||||||||||||  | ||||||||| ||||||||||||||||    
T  17778622 cgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 36878469 - 36878513
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||    
T  36878469 taataatttgagaaaatcacataattcagtgtaattataggtgtc 36878513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 7918197 - 7918154
Alignment:
Q  138 gacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||    
T  7918197 gacaccaggacacacctaatccgaggagtgtccgtgcttcatag 7918154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 16297270 - 16297223
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcat 179  Q
    |||||||||||| |||||| | ||||||||||||||| ||||||||||    
T  16297270 gtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 6427544 - 6427594
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| | ||||| || |||||| ||||||||||||    
T  6427544 cgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 9690263 - 9690213
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| | |||||||  ||||||| |||||||||||    
T  9690263 cgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcatag 9690213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 21145474 - 21145528
Alignment:
Q  58 taataatttgagaaaa-tgacataattaagtgtaatcataggtgtcatgtcggtg 111  Q
    ||||||||||| |||| |||||||||| |||||||||||||| ||| ||||||||    
T  21145474 taataatttgaaaaaaatgacataattcagtgtaatcataggcgtcgtgtcggtg 21145528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 21366038 - 21365992
Alignment:
Q  135 tccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||| ||||| | ||||||||||||||| ||||||||||||    
T  21366038 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 22515873 - 22515827
Alignment:
Q  135 tccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||| ||||| | ||||||||||||||| ||||||||||||    
T  22515873 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 23440005 - 23440051
Alignment:
Q  45 acacggacacgtgtaataatttgagaaaatgacataattaagtgtaa 91  Q
    |||| ||||||| ||||||||||||||||||| |||||| |||||||    
T  23440005 acaccgacacgtataataatttgagaaaatgatataatttagtgtaa 23440051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 37598900 - 37598950
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||  ||||||| | ||||||||||||||| ||||||||||||    
T  37598900 cgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 3921675 - 3921712
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcat 95  Q
    |||||||||||||||||||||||||| | |||||||||    
T  3921675 taataatttgagaaaatgacataattcaatgtaatcat 3921712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 6414981 - 6414932
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    |||||| ||||||| |||||| || ||||||||||||| |||||||||||    
T  6414981 cgtgtctgacaccgcgacacatttcatccgaggagtgtccgtgcttcata 6414932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 6573999 - 6574040
Alignment:
Q  60 ataatttgagaaaatgacataattaagtgtaatcataggtgt 101  Q
    ||||||||||| ||||| |||||| |||||||||||||||||    
T  6573999 ataatttgagacaatgatataatttagtgtaatcataggtgt 6574040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 7918262 - 7918217
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca 103  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtca 7918217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 11412832 - 11412775
Alignment:
Q  45 acacggacacgtgtaataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||   ||||||| |||||||||||||||||| | ||| ||||||||||||    
T  11412832 acacggacaccgataataatatgagaaaatgacataattcaatgtgatcataggtgtc 11412775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 16011290 - 16011339
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    |||||||||||||  |||||||||||| ||| || |||||||||||||||    
T  16011290 cgtgtccgacaccatgacacacttaattcgaagaatgttcgtgcttcata 16011339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 23219653 - 23219608
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgctt 176  Q
    |||||||||||||| ||||||| ||||||||| |||||| ||||||    
T  23219653 cgtgtccgacaccgtgacacacctaatccgagaagtgtttgtgctt 23219608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 29144369 - 29144320
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||| |||| | |||||||| |||||| ||||||||||||    
T  29144369 gtgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 30847771 - 30847726
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca 103  Q
    ||||||||||| |||||||||||||| | |||||||||| ||||||    
T  30847771 taataatttgaaaaaatgacataattcaatgtaatcatatgtgtca 30847726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 31667432 - 31667469
Alignment:
Q  57 gtaataatttgagaaaatgacataattaagtgtaatca 94  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  31667432 gtaataattttagaaaatgacataattaaatgtaatca 31667469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 34712434 - 34712389
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca 103  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtgtca 34712389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 42325568 - 42325601
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaa 91  Q
    |||||||||||||||||||||||||| |||||||    
T  42325568 taataatttgagaaaatgacataattcagtgtaa 42325601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 44296546 - 44296502
Alignment:
Q  57 gtaataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||    
T  44296546 gtaataatttgagaaaatgacataatttagt-taatcatatgtgtc 44296502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 373055 - 373099
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    |||||||||||||||||||||| ||| ||| |||||||| |||||    
T  373055 taataatttgagaaaatgacatgatttagtttaatcatatgtgtc 373099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 398816 - 398772
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||| ||||| |||||||| |||||||| |||||||||    
T  398816 taataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 1864931 - 1864887
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 1864887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 9630597 - 9630561
Alignment:
Q  145 ggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||| | ||||||||||||||||||||||||||||    
T  9630597 ggacacgcctaatccgaggagtgttcgtgcttcatag 9630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 11634114 - 11634066
Alignment:
Q  130 gcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttca 178  Q
    |||||||||||||| ||||||||  ||||||| |||||| |||||||||    
T  11634114 gcgtgtccgacaccaggacacaccaaatccgaagagtgtccgtgcttca 11634066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 11634175 - 11634131
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||  |||||||| | ||||||||||||||||    
T  11634175 taataatttgagaaaacaacataatttaatgtaatcataggtgtc 11634131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 22794129 - 22794085
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||| |||||||||||||  |||||||| |||||||||    
T  22794129 taataatttgaaaaaatgacataatacagtgtaattataggtgtc 22794085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 22881611 - 22881567
Alignment:
Q  137 cgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||   ||||||||||||||| ||||||||||||    
T  22881611 cgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 24176418 - 24176374
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||||||||||||| |||| ||| |||||||| |||||||||    
T  24176418 taataatttgagaaaataacatcattcagtgtaattataggtgtc 24176374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 27965983 - 27965939
Alignment:
Q  138 gacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    ||||||||||||| | ||||||||||||||| | |||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcatagc 27965939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 47989579 - 47989627
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||| |||| |||||||| | ||||||||||||||| ||||||||||||    
T  47989579 tgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 453 - 403
Alignment:
Q  130 gcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  453 gcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 56932 - 57052
Alignment:
Q  60 ataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatc 158  Q
    ||||||||||||||||| |||||| |||||||||||| |||||| |||| ||||| ||  | || ||  ||||||||| |||||||| | |||| |||||    
T  56932 ataatttgagaaaatgatataattcagtgtaatcataagtgtcagtgtc-gtgtcggtgacggagaccaatgcgtgtctgacaccggaaaacacctaatc 57030  T
Q  159 cgaggagtgttcgtgcttcata 180  Q
     |||||||||| ||||||||||    
T  57031 tgaggagtgtttgtgcttcata 57052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 8104 - 8052
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcggt 110  Q
    |||||||||||||||||||||||||| ||||||| ||||||| || |||||||    
T  8104 taataatttgagaaaatgacataattcagtgtaaacataggtatcgtgtcggt 8052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 32774 - 32822
Alignment:
Q  132 gtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcata 180  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||    
T  32774 gtgtccgacaccgggacacacataatccgaggagtgtcggtgcttcata 32822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 1957 - 2008
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtcatgtcgg 109  Q
    |||||||||| |||||||||||| || |||||||||||||||||| ||||||    
T  1957 taataatttgtgaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 2008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 236973 - 236914
Alignment:
Q  122 acactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||| |||||||||| ||||||||||||||| ||||| |||||||||  |||||||||||    
T  236973 acacggatgcgtgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcatag 236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 241674 - 241724
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||||||||||||| | ||||||||| ||||| ||||||||||||    
T  241674 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 4869 - 4821
Alignment:
Q  133 tgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    |||||||||| ||||||| | ||||||||||||||| ||||||||||||    
T  4869 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 135313 - 135263
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||| |||||| | ||||| |||| |||||||||||||||||    
T  135313 cgtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatag 135263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 71805 - 71855
Alignment:
Q  131 cgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||||||||||||||||||   |||||||||||||||  |||||||||||    
T  71805 cgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 263423 - 263303
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtca-tgtcggtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaa 156  Q
    ||||||||||||||||  |||||||| |||||||| ||| |||||| |||| ||||| || |||||||| ||  ||||| ||| |||  ||||| | |||    
T  263423 taataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtc-gtgtcggtgtcagacac-gacacgtgttcgataccaagacacgcctaa 263326  T
Q  157 tccgaggagtgttcgtgcttcat 179  Q
    |||||||||||| |||| |||||    
T  263325 tccgaggagtgtccgtggttcat 263303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 2987 - 3059
Alignment:
Q  109 gtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatagc 182  Q
    ||||| ||||||||||| ||  ||||| ||||||||| |||| | ||||||||||||||| |||||| ||||||    
T  2987 gtgtcggtatcagacac-gacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccatagc 3059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 8635 - 8564
Alignment:
Q  109 gtgtcagtatcagacactgatgcgtgtccgacaccgggacacacttaatccgaggagtgttcgtgcttcatag 181  Q
    ||||| ||||| ||||| ||| |||||||||||| || |||| | |||| |||||||||| ||||||||||||    
T  8635 gtgtcggtatcggacac-gatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 1275 - 1247
Alignment:
Q  50 gacacgtgtaataatttgagaaaatgaca 78  Q
    |||||||||||||||||||||||||||||    
T  1275 gacacgtgtaataatttgagaaaatgaca 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 26006 - 26050
Alignment:
Q  58 taataatttgagaaaatgacataattaagtgtaatcataggtgtc 102  Q
    ||||||| |||||||||||||| ||| |||| |||||||||||||    
T  26006 taataatgtgagaaaatgacatgattcagtgcaatcataggtgtc 26050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University