View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8242_low_25 (Length: 215)
Name: NF8242_low_25
Description: NF8242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8242_low_25 |
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Alignment Details
Target: chr8 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 15153012 - 15152830
Alignment:
| Q |
20 |
atattgaaaataggctacacaaaaaatgaacatttatcctctttattaatggtattgaaaataggccattggccatttcctcgacatctttgtttccgac |
119 |
Q |
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| T |
15153012 |
atattgaaaataggctacacaaaaaatgaacatttatcctctttattaatggtattgaaaataggccattggccatttcctcgacatctttgtttccgac |
15152913 |
T |
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| Q |
120 |
atccttttctaagtgtatagaactccgactaggcttcgagaaagtcacctccgatggaaatatacctctttgtcatctctgct |
202 |
Q |
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| T |
15152912 |
atccttttctaagtgtatagaactccgactgggcttcgagaaagtcgcctccgacggaaatatacctctttgtcatctctgct |
15152830 |
T |
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