View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8245_high_10 (Length: 262)
Name: NF8245_high_10
Description: NF8245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8245_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 8235957 - 8235709
Alignment:
| Q |
1 |
ttctttctctatccctaaactaaagtatatttatgtgttaacatttcaaatacgtttatggttttcatacataacggtagatgctacaataaattaggga |
100 |
Q |
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| T |
8235957 |
ttctttctctatccctaaactaaagtatatttatgtgttaacatttcaaatacgtttatggttttcatacataacggtagatgctacaataaattaggga |
8235858 |
T |
|
| Q |
101 |
aattttttaacataaacctgaaatgaagtttcgagtgaggattccttattatgttttgtaggaacaggacgattgtacttagcgtatgtacattttaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8235857 |
aattttttaacataaacctgaaatgaagtttcgagtgaggattccttattatgttttgtaggaacaggacgattgtacttagcgtatgtacattttaaaa |
8235758 |
T |
|
| Q |
201 |
ctgtttgannnnnnnnatgaaacaagttagtgtggtctctgttgatgtc |
249 |
Q |
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|||||||| ||||||||||||||||||||||||||| ||||| |
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| T |
8235757 |
ctgtttgattttttttatgaaacaagttagtgtggtctctgtttatgtc |
8235709 |
T |
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