View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8245_high_6 (Length: 379)
Name: NF8245_high_6
Description: NF8245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8245_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 24 - 364
Target Start/End: Original strand, 37233882 - 37234224
Alignment:
| Q |
24 |
gacataaacatgaatgaacaattttctattccaatactaaactaacaacaaaa--ttctaaagcagataagaaaaactaaccaggtgaacattttggagc |
121 |
Q |
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| T |
37233882 |
gacataaacatgaatgaacaattttctattccaatagtaaactaacaacaaaacattctaaagcagataagaaaaactaaccaggtgaacattttggagc |
37233981 |
T |
|
| Q |
122 |
caaagaaccaagaacatcctcaagtttaaagggcaaagcaggcaaaaaataaagaaacacaacatcaaaaggagaccatttttccggaacaatagtaacc |
221 |
Q |
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| T |
37233982 |
caaagaaccaagaacatcctcaagtttaaagggcaaagcaggcaaaaaataaagaaacacaacatcaaaaggagaccatttttccggaacaatagtaacc |
37234081 |
T |
|
| Q |
222 |
tctccttgccaacacttaatattatcatatttctcaataagaagagccaatatcaaaagtgagtcatgaagaacaagcatagacttgaatttagaaccac |
321 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37234082 |
tctccttgccaacacttaatattatcatatttctcaataagaagagccaatatcaaaagtgagtcatgaagaacaagcatagacttgaatttagaaccac |
37234181 |
T |
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| Q |
322 |
caactaaacaatccacaaactcttcagaaccacttgaaaccaa |
364 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37234182 |
caactaaacaatccacaaactcttcagaaccacttgaaaccaa |
37234224 |
T |
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