View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8245_low_9 (Length: 350)
Name: NF8245_low_9
Description: NF8245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8245_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 59 - 338
Target Start/End: Original strand, 26406016 - 26406300
Alignment:
| Q |
59 |
aatgaatttcaatgttattatt-----atagggacaaaatacagaatgggtcacactcaaatataataatccaaatccatcaatacatgactggattggg |
153 |
Q |
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| T |
26406016 |
aatgaatttcaatgttattattatattatagggacaaaatacagaatgggtcacactcaaatataataatccaaatccatcaatacatgactggattggg |
26406115 |
T |
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| Q |
154 |
gtcttctctcctgcaaacttcaggtacatcttcaatatcttactctatgtttccaacatcttctacttgaattaattcggacttgttcaatgtttcaaaa |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
26406116 |
gtcttctctcctgcaaacttcaggtacatcttcaatatcttactctatatttcgaacatcttctacttgaattaattcggactttttcaatgtttcaaaa |
26406215 |
T |
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| Q |
254 |
tttccagttcttctatttgccctgctcaaaacagacttgtcaatcctccattattgtgttctgcgcctatcaaggttcgtgtgtg |
338 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
26406216 |
tttccagttcttctatttgccctgctcaaaacagacttgtcaatcctccattattgtgttctgcgcctattaaggttcgtgtgtg |
26406300 |
T |
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