View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8246_high_12 (Length: 349)
Name: NF8246_high_12
Description: NF8246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8246_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 19 - 336
Target Start/End: Original strand, 37499520 - 37499837
Alignment:
| Q |
19 |
gaatttccaaacagaatttccagcttaataacagaatttatcttaagagactaattacgaacgttacagggcacaaatgtggtatcaggtacaggaacag |
118 |
Q |
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| T |
37499520 |
gaatttccaaacagaatttccagcttaataacagaatttatcttaagagactaattacgaacgttacagggcacaaatgtggtatcaggtacgggaacag |
37499619 |
T |
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| Q |
119 |
gtttagttatttcaactggatcaaatacttacatgagcaccatgttttcaaaaattgggaagaaaaaaccgccagacgactttgaaaagtgtctcagatg |
218 |
Q |
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| T |
37499620 |
gtttagttatttcaactggatcaaatacttacatgagcaccatgttttcaaaaattgggaagaaaaaaccgccagacgactttgaaaagtgtctcagatg |
37499719 |
T |
|
| Q |
219 |
gatattttacatgcttatttccgttatgctagtagttgttacaattatgttcgtgacagatttcactacatctcataatttgagcaagagtgttctcttt |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37499720 |
gatattttacatgcttatttccgttatgctagtagttgttacaattatgttcgtgacagatttcactacatctcataatttgagcaagagtgttctcttt |
37499819 |
T |
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| Q |
319 |
gccatctcagtttcatct |
336 |
Q |
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|||||||||||||||||| |
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| T |
37499820 |
gccatctcagtttcatct |
37499837 |
T |
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