View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8247_high_9 (Length: 242)
Name: NF8247_high_9
Description: NF8247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8247_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 26915536 - 26915758
Alignment:
| Q |
1 |
ccaacaagatcttaggaaagtaaatcaaccacacaaacgaaaagtgagctacaaaaatctaataggatagggttgggtcagggtctcatgaagggtccat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |
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| T |
26915536 |
ccaacaagatcttaggaaagtaaatcaaccacacaaacgaaaagtgagctacaaaaatctaataggatagggttgggtcatgatctcatgaagggtccat |
26915635 |
T |
|
| Q |
101 |
tcaattaatgttcttcaactttactaaattatttcaagatttcgactttgccgtgaatcaagccttgcttcacataccaactggcattttagtttttacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26915636 |
tcaattaatgttcttcaactttactaaattatttcaagatttcgactttgccgtgaatcaagccttgcttcacataccaactggcattttagtttttacc |
26915735 |
T |
|
| Q |
201 |
aatctcactcaaataatgtgtat |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
26915736 |
aatctcactcaaataatgtgtat |
26915758 |
T |
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