View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8248_high_10 (Length: 337)
Name: NF8248_high_10
Description: NF8248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8248_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 8019642 - 8019895
Alignment:
| Q |
18 |
gtttcttgcatttatcactatcattgttaatgtgattgtgatcaatgatcatatataactgataaattcaaagtgtag---ttagtacttacttagtacc |
114 |
Q |
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| T |
8019642 |
gtttcttgcatttatcactatcattgttaatgtgattgtgatcaatgatcatatataactgataaattcaaagtgtagttattagtacttacttagtacc |
8019741 |
T |
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| Q |
115 |
ttcttagaaagtagaaatggacaagactcaaaacat---------------gaagcaaagacacacaaataaactcttgtttggtggtaaacaacttaca |
199 |
Q |
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| T |
8019742 |
ttcttagaaagtagaaatggacaagactcaaaacatgaagcgtggagttaagaagcaaagacacacaaataaactcttgtttggtggtaaacaacttaca |
8019841 |
T |
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| Q |
200 |
catcacaaactcattctcgttttttctcagctaccaaacaaaactcatttgtcg |
253 |
Q |
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| T |
8019842 |
catcataaactcattctcgttttttctcagctaccaaacaaaactcatttgtcg |
8019895 |
T |
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