View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8248_low_28 (Length: 274)
Name: NF8248_low_28
Description: NF8248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8248_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 255
Target Start/End: Original strand, 35196397 - 35196651
Alignment:
| Q |
14 |
ataatactattactcatagaaagacgacagcgggaaagatcaaagtgtttttgagtaaatatgaattgtaaacgtcaaaagtttaa-------------c |
100 |
Q |
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| T |
35196397 |
ataatactattactcatagaaagaagacagcgggaaagatcaaagtgttttcgagtaaatatgaattgtaaacgtcaaaagtttaagataaaaattcaac |
35196496 |
T |
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| Q |
101 |
cttaaaattaaattttgaactaattttttatggagcaaattctaaacatgtttgtaaagtattattctaaatatatgtctaatgtcgatttaacatcaag |
200 |
Q |
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| T |
35196497 |
cttaaaattaaattttgaactaattttttatggagcaaattctaaacatatttgtaaagtattattctaaatatatgtcgaatgtcgatttaacatcaag |
35196596 |
T |
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| Q |
201 |
agtaaaagtgtgtgtggggtaaaattttgtagggagcaactaaatggattcattc |
255 |
Q |
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| T |
35196597 |
agtaaaagtgtgtgtggggtaaaattttgtagggagcaactaaatggattcattc |
35196651 |
T |
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