View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8248_low_30 (Length: 254)
Name: NF8248_low_30
Description: NF8248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8248_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 44828802 - 44829019
Alignment:
| Q |
21 |
ggaggtccagcaaaacatgtattacatatgaattaaatttgaaatttaagaaatttacatctttaactctactgataaattaaatagaacttctaaatgt |
120 |
Q |
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| T |
44828802 |
ggaggtccagcaaaacatgtattacatatcaattaaatttgaaatttaagaa-tttacatctttaattctactgataaattaaatagaacttctaaatgt |
44828900 |
T |
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| Q |
121 |
aagtataataacatgtacattttgatttacctaataaatcggtcttcaccctgagaaaatttacgttcaacttccttgtcctcgtttgactcttcatcac |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44828901 |
aagtataataacatgtacattttgatttacctaataaatcggtcttcaccctgagaaaatttacgttcaacttccttgtcctcgtttgactcttcatcac |
44829000 |
T |
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| Q |
221 |
tatcactgcatactgatgt |
239 |
Q |
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|||||||||||||| |||| |
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| T |
44829001 |
tatcactgcatactaatgt |
44829019 |
T |
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