View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8249_high_25 (Length: 241)
Name: NF8249_high_25
Description: NF8249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8249_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 48637109 - 48636886
Alignment:
| Q |
1 |
catacgatattaagaattttacatcattaggttataacaaattactaagctatgccatttaaatcttcaaccatcacgaatgttgacaccacggctaaat |
100 |
Q |
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| T |
48637109 |
catacgatattaagaattttacgtcattaggttataacaaattactaagctatgccatttaaatcttcaaccatcacgaatgttgacaccacggctaaat |
48637010 |
T |
|
| Q |
101 |
caacaacctcatcaatctattttgacttataaactatagaagaataaaaacctagtaactacagaccttttctttcttaattaagaacctatcaagtttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
48637009 |
caacaacctcatcaatctattttgacttataaactatagaagaataaaaacctagtaactacagaccttttctttcttaattaaaaacctatcaagtttg |
48636910 |
T |
|
| Q |
201 |
tctcatctcatacagtaaaaggct |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
48636909 |
tctcatctcatacagtaaaaggct |
48636886 |
T |
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