View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8250_high_18 (Length: 236)

Name: NF8250_high_18
Description: NF8250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8250_high_18
NF8250_high_18
[»] chr3 (37 HSPs)
chr3 (1-223)||(3354935-3355157)
chr3 (66-175)||(3723899-3724009)
chr3 (1-70)||(49579162-49579231)
chr3 (4-67)||(17258183-17258246)
chr3 (1-67)||(53255274-53255340)
chr3 (178-223)||(3723807-3723852)
chr3 (1-66)||(50420871-50420936)
chr3 (1-65)||(53254963-53255027)
chr3 (4-67)||(16883787-16883850)
chr3 (7-66)||(40988597-40988656)
chr3 (7-65)||(2181315-2181373)
chr3 (1-59)||(3354755-3354813)
chr3 (1-51)||(33687618-33687668)
chr3 (7-68)||(49002757-49002818)
chr3 (1-33)||(1807650-1807682)
chr3 (3-67)||(3193033-3193097)
chr3 (7-51)||(32772036-32772080)
chr3 (1-65)||(33687964-33688028)
chr3 (3-71)||(51315736-51315804)
chr3 (110-163)||(3203358-3203413)
chr3 (3-66)||(20432189-20432252)
chr3 (1-64)||(37755187-37755250)
chr3 (94-157)||(3219180-3219246)
chr3 (1-63)||(16883493-16883555)
chr3 (129-162)||(3308314-3308347)
chr3 (9-66)||(14340732-14340789)
chr3 (1-66)||(15311838-15311902)
chr3 (1-66)||(32831478-32831543)
chr3 (7-64)||(36315790-36315847)
chr3 (3-67)||(86816-86880)
chr3 (3-67)||(28204478-28204542)
chr3 (16-64)||(32831161-32831209)
chr3 (7-67)||(33944865-33944925)
chr3 (3-71)||(38958095-38958163)
chr3 (3-51)||(43816750-43816798)
chr3 (7-51)||(51224940-51224984)
chr3 (7-71)||(54476037-54476101)
[»] chr7 (26 HSPs)
chr7 (3-69)||(21939326-21939392)
chr7 (7-71)||(327434-327498)
chr7 (3-62)||(9500154-9500213)
chr7 (1-71)||(24432330-24432400)
chr7 (8-66)||(43078060-43078118)
chr7 (1-66)||(43092030-43092095)
chr7 (7-67)||(282857-282917)
chr7 (1-65)||(24679094-24679158)
chr7 (1-64)||(28960649-28960710)
chr7 (1-63)||(27756267-27756329)
chr7 (1-70)||(7873504-7873573)
chr7 (1-65)||(10691298-10691362)
chr7 (1-65)||(35793375-35793439)
chr7 (8-71)||(46199047-46199110)
chr7 (3-66)||(28350115-28350178)
chr7 (3-66)||(46266505-46266568)
chr7 (1-63)||(9477440-9477502)
chr7 (1-71)||(26787916-26787986)
chr7 (1-67)||(30283404-30283470)
chr7 (1-51)||(30283715-30283765)
chr7 (3-65)||(36580274-36580336)
chr7 (1-66)||(7873881-7873946)
chr7 (1-62)||(9477136-9477197)
chr7 (3-68)||(23826274-23826339)
chr7 (16-65)||(29933190-29933239)
chr7 (16-72)||(48059211-48059267)
[»] chr4 (24 HSPs)
chr4 (1-66)||(3369846-3369911)
chr4 (1-65)||(53831152-53831216)
chr4 (7-65)||(30064002-30064060)
chr4 (7-69)||(41148161-41148223)
chr4 (1-66)||(1096549-1096614)
chr4 (1-68)||(30627023-30627090)
chr4 (8-71)||(35830302-35830365)
chr4 (3-62)||(37831595-37831654)
chr4 (7-66)||(41148556-41148615)
chr4 (1-63)||(16322979-16323041)
chr4 (1-67)||(30064350-30064416)
chr4 (1-70)||(13388156-13388224)
chr4 (3-71)||(35393921-35393989)
chr4 (18-70)||(53578922-53578974)
chr4 (3-62)||(30626587-30626645)
chr4 (3-66)||(35383764-35383827)
chr4 (1-68)||(47742228-47742295)
chr4 (1-67)||(1095754-1095820)
chr4 (1-51)||(5303785-5303835)
chr4 (1-67)||(21552907-21552973)
chr4 (1-66)||(49804346-49804410)
chr4 (7-71)||(8143027-8143091)
chr4 (3-71)||(52865374-52865442)
chr4 (1-65)||(55038153-55038217)
[»] chr5 (24 HSPs)
chr5 (1-68)||(6464325-6464392)
chr5 (1-68)||(20364679-20364746)
chr5 (7-67)||(42585984-42586044)
chr5 (1-68)||(36361030-36361097)
chr5 (1-71)||(38498113-38498183)
chr5 (1-41)||(36501424-36501464)
chr5 (11-70)||(2974894-2974953)
chr5 (1-67)||(20126436-20126502)
chr5 (3-68)||(35166544-35166610)
chr5 (1-63)||(37426704-37426765)
chr5 (7-69)||(38162589-38162651)
chr5 (13-66)||(128253-128306)
chr5 (3-62)||(3333695-3333754)
chr5 (17-68)||(20369397-20369448)
chr5 (3-66)||(36798428-36798491)
chr5 (8-51)||(38498262-38498305)
chr5 (7-66)||(42586343-42586402)
chr5 (1-71)||(12166799-12166869)
chr5 (1-71)||(22408796-22408866)
chr5 (3-56)||(36898642-36898696)
chr5 (1-70)||(11167868-11167937)
chr5 (1-71)||(20126668-20126740)
chr5 (2-67)||(20986944-20987009)
chr5 (8-68)||(12406038-12406098)
[»] chr1 (33 HSPs)
chr1 (1-64)||(37008218-37008281)
chr1 (7-67)||(3814758-3814818)
chr1 (1-73)||(29816422-29816493)
chr1 (7-67)||(51549396-51549456)
chr1 (8-71)||(41915779-41915842)
chr1 (1-71)||(46895431-46895501)
chr1 (7-67)||(3815052-3815112)
chr1 (17-69)||(10532211-10532263)
chr1 (7-66)||(12075269-12075328)
chr1 (1-67)||(367169-367235)
chr1 (1-51)||(1484384-1484434)
chr1 (8-66)||(3612445-3612503)
chr1 (1-51)||(10231126-10231176)
chr1 (1-63)||(13575152-13575213)
chr1 (1-63)||(40876995-40877057)
chr1 (17-66)||(46895806-46895855)
chr1 (7-51)||(7058379-7058423)
chr1 (7-63)||(12074958-12075014)
chr1 (17-61)||(23953116-23953160)
chr1 (1-67)||(29816117-29816180)
chr1 (1-69)||(39384577-39384645)
chr1 (9-68)||(35820110-35820169)
chr1 (17-68)||(39384235-39384286)
chr1 (8-71)||(43117249-43117312)
chr1 (17-71)||(1406630-1406684)
chr1 (4-62)||(1484676-1484734)
chr1 (1-63)||(10532507-10532569)
chr1 (17-71)||(25085393-25085447)
chr1 (18-68)||(25486479-25486529)
chr1 (16-66)||(39642199-39642249)
chr1 (1-66)||(10230786-10230850)
chr1 (13-62)||(31651337-31651386)
chr1 (10-70)||(23220820-23220880)
[»] chr2 (31 HSPs)
chr2 (1-67)||(14816047-14816113)
chr2 (1-69)||(23993909-23993977)
chr2 (1-71)||(35500341-35500411)
chr2 (1-70)||(20650365-20650434)
chr2 (1-65)||(14815698-14815762)
chr2 (1-66)||(12802454-12802519)
chr2 (1-66)||(14289265-14289329)
chr2 (7-66)||(8030125-8030184)
chr2 (3-70)||(14489463-14489529)
chr2 (3-65)||(15023090-15023152)
chr2 (1-70)||(10522638-10522707)
chr2 (1-62)||(29370719-29370780)
chr2 (1-62)||(31227138-31227199)
chr2 (17-65)||(4856709-4856757)
chr2 (7-71)||(11363876-11363940)
chr2 (3-71)||(34679342-34679410)
chr2 (7-66)||(14983956-14984015)
chr2 (1-64)||(17850484-17850547)
chr2 (9-64)||(20662516-20662571)
chr2 (3-66)||(36177343-36177405)
chr2 (7-70)||(44078545-44078608)
chr2 (3-66)||(44617989-44618052)
chr2 (7-69)||(21631814-21631876)
chr2 (3-65)||(36176981-36177043)
chr2 (1-67)||(39672671-39672736)
chr2 (1-66)||(23993722-23993786)
chr2 (1-66)||(35500039-35500104)
chr2 (7-67)||(52295-52355)
chr2 (3-67)||(19206140-19206204)
chr2 (7-51)||(28719331-28719375)
chr2 (1-61)||(31226855-31226915)
[»] chr8 (36 HSPs)
chr8 (1-69)||(9498905-9498973)
chr8 (7-66)||(755902-755961)
chr8 (12-66)||(11289307-11289361)
chr8 (1-71)||(29919069-29919138)
chr8 (1-71)||(45522441-45522511)
chr8 (1-65)||(4695004-4695069)
chr8 (1-66)||(35795581-35795646)
chr8 (7-71)||(2802642-2802706)
chr8 (1-69)||(17512093-17512161)
chr8 (17-76)||(26889282-26889341)
chr8 (17-63)||(9499223-9499269)
chr8 (18-68)||(41602878-41602928)
chr8 (1-51)||(45163710-45163760)
chr8 (16-69)||(18092907-18092960)
chr8 (7-67)||(756113-756173)
chr8 (7-63)||(4461676-4461732)
chr8 (3-71)||(20853372-20853440)
chr8 (7-51)||(23936293-23936337)
chr8 (1-69)||(29196612-29196680)
chr8 (1-68)||(2044672-2044738)
chr8 (1-63)||(5899211-5899274)
chr8 (3-66)||(17070906-17070969)
chr8 (3-66)||(17577303-17577366)
chr8 (3-62)||(27545607-27545666)
chr8 (1-71)||(1003795-1003864)
chr8 (8-66)||(14170421-14170479)
chr8 (1-63)||(29219373-29219435)
chr8 (7-65)||(45308454-45308512)
chr8 (17-70)||(6041084-6041137)
chr8 (17-70)||(6044716-6044769)
chr8 (1-66)||(8409815-8409879)
chr8 (17-66)||(23475623-23475672)
chr8 (1-62)||(29340771-29340832)
chr8 (17-69)||(5180691-5180743)
chr8 (3-67)||(16982624-16982688)
chr8 (9-69)||(18896423-18896483)
[»] scaffold0286 (2 HSPs)
scaffold0286 (1-69)||(17634-17702)
scaffold0286 (16-70)||(17940-17994)
[»] chr6 (15 HSPs)
chr6 (1-69)||(2164707-2164775)
chr6 (1-69)||(2176340-2176408)
chr6 (1-71)||(12799042-12799112)
chr6 (1-65)||(30369784-30369847)
chr6 (17-71)||(238924-238978)
chr6 (7-65)||(28574562-28574620)
chr6 (1-66)||(12798726-12798790)
chr6 (18-66)||(9070136-9070184)
chr6 (7-66)||(2017171-2017230)
chr6 (3-66)||(12766466-12766529)
chr6 (16-70)||(2164415-2164469)
chr6 (16-70)||(2176048-2176102)
chr6 (7-65)||(11623159-11623217)
chr6 (7-51)||(12203906-12203950)
chr6 (7-51)||(22515987-22516031)
[»] scaffold0725 (1 HSPs)
scaffold0725 (12-70)||(6692-6750)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-66)||(37783-37847)
[»] scaffold1088 (1 HSPs)
scaffold1088 (3-72)||(2012-2081)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-63)||(162293-162355)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-70)||(10346-10415)
[»] scaffold1458 (1 HSPs)
scaffold1458 (3-67)||(1469-1533)
[»] scaffold0515 (1 HSPs)
scaffold0515 (3-67)||(3637-3701)
[»] scaffold0306 (1 HSPs)
scaffold0306 (3-67)||(3637-3701)


Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 3354935 - 3355157
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaagttataagattacttttcttattgtgcat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3354935 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaagttataagattacttttcttattgtgcat 3355034  T
Q  101 gcattaagtatagttttacttaaatcaaaaagatgcaaacattcatgtaaagggaagtttgaaaccttaaatgaggaaatgttatttcaaacattcataa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3355035 gcattaagtatagttttacttaaatcaaaaagatgcaaacattcatgtaaagggaagtttgaaaccttaaatgaggaaatgttatttcaaacattcataa 3355134  T
Q  201 gagaaacaattcatggtatgagg 223  Q
    |||||||||||||||||||||||    
T  3355135 gagaaacaattcatggtatgagg 3355157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 3724009 - 3723899
Alignment:
Q  66 taaaaagttataagattacttttcttattgtgcatgcatt-aagtatagttttacttaaatcaaaaagatgcaaacattcatgtaaagggaagtttgaaa 164  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | ||| |||||||||      
T  3724009 taaaaagttatatgattacttttcttattgtgcatgcatttaagtatagttttacttaaatcaagaagatgcaaacattcatttgaagagaagtttgatg 3723910  T
Q  165 ccttaaatgag 175  Q
    | |||||||||    
T  3723909 cattaaatgag 3723899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 49579162 - 49579231
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||||||||||||||| |||||||||||||  ||||||||| |||| |||| |||||||||||| |||||    
T  49579162 tattttgttaggggactaaaatcgcaactttctgatacttaaggggtcaaaactgctattaagcataaaa 49579231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 17258183 - 17258246
Alignment:
Q  4 tttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||||  ||| ||||||||||    
T  17258183 tttgttaggggtccaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagccta 17258246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 53255274 - 53255340
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||| |||||||| |||||||||||||||||| | || |||| ||||||| |||||||||||||||    
T  53255274 tatttagttagggggccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaagccta 53255340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 3723852 - 3723807
Alignment:
Q  178 aatgttatttcaaacattcataagagaaacaattcatggtatgagg 223  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  3723852 aatgtaatttcaaacatttataagagaaacaattcatggtatgagg 3723807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 50420871 - 50420936
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||| |||  ||||||||||||||| | ||||||||| ||||||| ||||||||||||||    
T  50420871 tattttgttaaggggtcaaaatcgcaacttcataatacttaggaggccaaaactgctattaagcct 50420936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53255027 - 53254963
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    ||||| ||||| || |||||||||||||||||||| || |||||||||||| ||| |||||||||    
T  53255027 tatttagttagagggccaaaatcgcaacttcttgaaacatagggggccaaaactgttattaagcc 53254963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 16883787 - 16883850
Alignment:
Q  4 tttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||||||||||  ||||||||||||||  |||||||||||||||||||  | ||||||||||||    
T  16883787 tttgttagggggtcaaaatcgcaactttctgatacttagggggccaaaaatactattaagccta 16883850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 40988656 - 40988597
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||  ||| |||||||||    
T  40988656 gttaggggaccaaaatcgcaacttcttgaaacatagggagccaaaagtgcaattaagcct 40988597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 2181373 - 2181315
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||||||| |||||||||||||||||||| || ||||||||||||  ||| ||||||||    
T  2181373 gttaggggtccaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcc 2181315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3354813 - 3354755
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctat 59  Q
    |||||| ||||| | |||||||||||| ||| ||||||||||||||||||| |||||||    
T  3354813 tattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 3354755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33687668 - 33687618
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    |||||||||||||| | |||||||||||||  |||||||||||||||||||    
T  33687668 tattttgttagggggctaaaatcgcaactttctgatacttagggggccaaa 33687618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 49002757 - 49002818
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    |||||||| |||||||||||||||||||| | |||| ||||||||  ||| |||||||||||    
T  49002757 gttaggggtccaaaatcgcaacttcttgaaaattagagggccaaaagtgcaattaagcctaa 49002818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1807650 - 1807682
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttctt 33  Q
    |||||||||||||||||||||||||||||||||    
T  1807650 tattttgttaggggaccaaaatcgcaacttctt 1807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 3193033 - 3193097
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||| |||||||  ||||||||||||||||||| | ||||||||  ||| |||||||||||||||    
T  3193033 ttttcttagggggtcaaaatcgcaacttcttgaaagttagggggtgaaaactgctattaagccta 3193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 32772036 - 32772080
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||    
T  32772036 gttaggggaccaaaatcacaacttcttgaaacatagggggccaaa 32772080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33687964 - 33688028
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    ||||||||||||||  || |||||||||||  |||||||||| | |||||| |||||||||||||    
T  33687964 tattttgttagggggtcagaatcgcaactttctgatacttagagagccaaaactgctattaagcc 33688028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 51315736 - 51315804
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||| ||||||| |||||||||||||||   || | ||||||||| ||| |||||||||||||||||||    
T  51315736 ttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctaaaaa 51315804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 3203413 - 3203358
Alignment:
Q  110 atagttttactt-aaatcaa-aaagatgcaaacattcatgtaaagggaagtttgaa 163  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||    
T  3203413 atagttttacttgaaatcaagaaagatgcaaacatttatgtaaagagaagtttgaa 3203358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 20432252 - 20432189
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||| ||||||||||||| |||||||||| | | | ||||||||| ||| ||||||||||||||    
T  20432252 ttttcttaggggaccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaagcct 20432189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37755187 - 37755250
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagc 64  Q
    ||||| |||||||| | |||||||||||||| ||| || |||||||||||| |||| |||||||    
T  37755187 tatttagttagggggctaaaatcgcaacttcatgaaacatagggggccaaaactgcaattaagc 37755250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 3219180 - 3219246
Alignment:
Q  94 tgtgcatgcatta-agtatagttttactt-aaatcaa-aaagatgcaaacattcatgtaaagggaag 157  Q
    ||||||||||||| |  |||||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  3219180 tgtgcatgcattacaacatagttttacttgaaatcaagaaagatgcaaacattcatgttaagggaag 3219246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16883555 - 16883493
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    ||||||||||| ||  ||||||| ||||||| |||||||||||||| |||| ||| |||||||    
T  16883555 tattttgttagagggtcaaaatcacaacttcctgatacttagggggtcaaaactgttattaag 16883493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 3308314 - 3308347
Alignment:
Q  129 aaagatgcaaacattcatgtaaagggaagtttga 162  Q
    ||||||||||||||||||||||||||||| ||||    
T  3308314 aaagatgcaaacattcatgtaaagggaagattga 3308347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 14340789 - 14340732
Alignment:
Q  9 taggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||||| |||||| ||| | ||||||||| ||| || |||||||||||    
T  14340789 taggggaccaaaatcgtaacttcgtgaaagttagggggcgaaaactcctattaagcct 14340732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15311902 - 15311838
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||| ||||||| |||||||| | |||||||| ||  |||| ||||||||||||||    
T  15311902 tattttgttagggg-ccaaaattgcaacttcataatacttagaggatcaaaactgctattaagcct 15311838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32831478 - 32831543
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||| |||||||||||||||| ||||||| || | || |||||||||||| ||  ||||||||||    
T  32831478 tatttagttaggggaccaaaattgcaacttttttaaacatagggggccaaaactattattaagcct 32831543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 36315847 - 36315790
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagc 64  Q
    |||||||| |||||||||||||||||||| || ||| ||||||||  ||| |||||||    
T  36315847 gttaggggtccaaaatcgcaacttcttgaaacatagtgggccaaaggtgcaattaagc 36315790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 86816 - 86880
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||| ||||||| |||||||||||||||| ||| | ||||||| | ||| || ||||||||||||    
T  86816 ttttcttagggggccaaaatcgcaacttcatgaaagttaggggacgaaaactcctattaagccta 86880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 28204542 - 28204478
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||| |||||||  ||||||||||||||| ||| | ||| ||||| ||| |||||||||||||||    
T  28204542 tttttttagggggtcaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagccta 28204478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 32831209 - 32831161
Alignment:
Q  16 ccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagc 64  Q
    ||||||| | |||||||||| || |||||||||||| ||||||||||||    
T  32831209 ccaaaattgtaacttcttgaaacatagggggccaaaactgctattaagc 32831161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 33944865 - 33944925
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||||||  ||||||||||||||||||| || ||| ||||||||  ||| ||||||||||    
T  33944865 gttaggggttcaaaatcgcaacttcttgaaacatagagggccaaaagtgcaattaagccta 33944925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 38958095 - 38958163
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||| |||||||  |||||||| || ||| ||| | ||||||||| ||| |||||||||||||||||||    
T  38958095 ttttcttaggggctcaaaatcgtaatttcgtgaaagttagggggcgaaaactgctattaagcctaaaaa 38958163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 43816798 - 43816750
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    ||||||||| |||||||||||| ||||| |||||| |||||| ||||||    
T  43816798 ttttgttagaggaccaaaatcgtaactttttgatagttagggtgccaaa 43816750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 51224984 - 51224940
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    |||||||| |||||||||||||||||||| || |||| |||||||    
T  51224984 gttagggggccaaaatcgcaacttcttgaaacataggaggccaaa 51224940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 54476101 - 54476037
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    ||||||||  ||||||||||||||||| | |  ||||||||||||  ||| ||||||||||||||    
T  54476101 gttagggggtcaaaatcgcaacttcttaaaatatagggggccaaaagtgcaattaagcctaaaaa 54476037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 21939326 - 21939392
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  21939326 tttttttagggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctattaagcctaaa 21939392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 327434 - 327498
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||| |||||||||||||||||||| || |||||||||| | |||||||||||||||||||    
T  327434 gttagggggccaaaatcgcaacttcttgaaacatagggggccacaactgctattaagcctaaaaa 327498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 9500154 - 9500213
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  9500154 ttttcttaggggaccaaaatcgcaacttcttgaaacttagggggctaaaactgctattaa 9500213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24432400 - 24432330
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||| ||||||  ||||||||||||||||||||||||||| ||| ||||  ||||||||||||||||||    
T  24432400 tatttttttagggagccaaaatcgcaacttcttgatacttagtgggtcaaaattgctattaagcctaaaaa 24432330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 43078060 - 43078118
Alignment:
Q  8 ttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  43078060 ttagggggccaaaatcgcaacttcttgaaacagagggggccaaatctgctattaagcct 43078118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43092030 - 43092095
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||| |||||||| ||||||| | |||||||||| || |||||||||||||||||||||||||||    
T  43092030 tatttagttagggggccaaaattgtaacttcttgaaacatagggggccaaatctgctattaagcct 43092095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 282857 - 282917
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||||||| |||||||||||||||||||| || |||| ||||||| |||||||||||||||    
T  282857 gttagggggccaaaatcgcaacttcttgaaacataggaggccaaaactgctattaagccta 282917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24679094 - 24679158
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||||||||||||| |||||||||||| ||||||| || |||||||||||| ||| |||||||||    
T  24679094 tattttgttagggggccaaaatcgcaatttcttgaaacatagggggccaaaactgttattaagcc 24679158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28960710 - 28960649
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagc 64  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||||||||||    
T  28960710 tattttgttaggg-accaaaatcacaacttcttgatactta-ggggccaaaactgctattaagc 28960649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27756329 - 27756267
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    |||||||||||||| |||||||||||||| | | ||||||| ||||||||| |||||||||||    
T  27756329 tattttgttagggggccaaaatcgcaactacctaatacttaaggggccaaaactgctattaag 27756267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7873573 - 7873504
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    ||||| |||||||| |||||||||||||| ||||| || ||||||| |||| |||| |||||||||||||    
T  7873573 tatttagttagggggccaaaatcgcaactccttgaaacatagggggtcaaaactgcaattaagcctaaaa 7873504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10691362 - 10691298
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    ||||| |||||||| |||||||||||||||||||| || ||||||||||||  ||| ||||||||    
T  10691362 tatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaattgcaattaagcc 10691298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35793439 - 35793375
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||||||||||||| | |||||||||||||| | | | ||||||||||||| |||||||||||||    
T  35793439 tattttgttaggggcctaaaatcgcaacttcctaaaatttagggggccaaaactgctattaagcc 35793375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 46199110 - 46199047
Alignment:
Q  8 ttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||||||||||||||||||||| | |  ||| ||| |||| |||||||||||||||||||    
T  46199110 ttaggggaccaaaatcgcaacttcttaaaatatagaggggcaaaactgctattaagcctaaaaa 46199047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 28350178 - 28350115
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||| ||||||| ||||||||| |||||| ||| | ||||||||| ||| ||||||||||||||    
T  28350178 ttttcttagggggccaaaatcgtaacttcgtgaaagttagggggctaaaactgctattaagcct 28350115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 46266505 - 46266568
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||| |||||||  |||||| |||||||||||| |||||||| || ||| ||||||||||||||    
T  46266505 ttttcttaggggggcaaaattgcaacttcttgaaacttagggagctaaaactgctattaagcct 46266568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9477440 - 9477502
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    |||||||||||||| ||||||||||||||| || | || |||| || |||| |||||||||||    
T  9477440 tattttgttagggggccaaaatcgcaactttttaaaacataggaggtcaaaactgctattaag 9477502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26787916 - 26787986
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||||||| | | |||||| |||||| |||| |  |||||||||||| || ||||||||||||||||    
T  26787916 tattttgttaggaggcaaaaatcacaactttttgaaatatagggggccaaaactactattaagcctaaaaa 26787986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30283470 - 30283404
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||||||||| ||| |||||||||||||||||||| || || ||||  ||| |||| ||||||||||    
T  30283470 tattttgttatggggccaaaatcgcaacttcttgaaacataaggggtaaaaactgcaattaagccta 30283404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30283715 - 30283765
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    |||||| |||||||  |||||||||||||| ||||||| ||||||||||||    
T  30283715 tattttattagggggtcaaaatcgcaactttttgatacatagggggccaaa 30283765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 36580336 - 36580274
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||| |||||||||||||||| ||||||| ||| | ||||||| | ||| |||||||||||||    
T  36580336 ttttcttaggggaccaaaatcacaacttcgtgaaagttaggggccgaaaactgctattaagcc 36580274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7873881 - 7873946
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||| |||||||  |||||||| ||| ||||||| || |||||||||||| |||| |||||||||    
T  7873881 tatttagttagggagccaaaatcacaatttcttgaaacatagggggccaaaactgcaattaagcct 7873946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9477197 - 9477136
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    |||||||||| ||| | ||||||||||||| || | || |||||||||||| ||||||||||    
T  9477197 tattttgttaaggggctaaaatcgcaactttttaaaacatagggggccaaaactgctattaa 9477136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 23826274 - 23826339
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    |||| ||| ||| |||||||||||||||| ||| | ||||||| | ||| ||||||||||||||||    
T  23826274 ttttcttaaggggccaaaatcgcaacttcgtgaaagttaggggacaaaaactgctattaagcctaa 23826339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 29933239 - 29933190
Alignment:
Q  16 ccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||||||||||||||||||| || |||| || |||| |||||||||||||    
T  29933239 ccaaaatcgcaacttcttgaaacataggaggtcaaaactgctattaagcc 29933190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 48059211 - 48059267
Alignment:
Q  16 ccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaag 72  Q
    |||||||| ||||||||| | ||||||||| | ||| ||||||||||||| ||||||    
T  48059211 ccaaaatcacaacttcttaaaacttaggggcctaaaactgctattaagccaaaaaag 48059267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3369911 - 3369846
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  3369911 tattttgttagggggccaaaatcgcaacttcttgatacttagggggcaaaaactgatattaagcct 3369846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53831216 - 53831152
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    ||||| ||||||||||||||||||||||||||| | || |||||||||||| |||||||||||||    
T  53831216 tatttagttaggggaccaaaatcgcaacttcttaaaacatagggggccaaaactgctattaagcc 53831152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 30064060 - 30064002
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    ||||||||||||||||||||||||||| | || |||||||||||| || ||||||||||    
T  30064060 gttaggggaccaaaatcgcaacttcttaaaacatagggggccaaaacttctattaagcc 30064002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 41148223 - 41148161
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||||| | ||||||| |||||||||| || |||||||||||| |||||||||||||||||    
T  41148223 gttagggggctaaaatcggaacttcttgaaacatagggggccaaaactgctattaagcctaaa 41148161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1096549 - 1096614
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||| |||||||||| |  || ||||||||||||||||||| |||| |||||||||    
T  1096549 tattttgttagggggccaaaatcgccaaatcatgatacttagggggccaaaactgcaattaagcct 1096614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30627023 - 30627090
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    |||||||||| |||  |||||||| ||||| |||||||||||||||  ||| ||||||||||||||||    
T  30627023 tattttgttatggggtcaaaatcgtaactttttgatacttagggggtgaaaactgctattaagcctaa 30627090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 35830302 - 35830365
Alignment:
Q  8 ttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    ||||||||| |||||| ||||||||||| |  |||| ||||||| |||||||||||||||||||    
T  35830302 ttaggggacaaaaatcacaacttcttgaaatataggaggccaaaactgctattaagcctaaaaa 35830365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 37831654 - 37831595
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    |||| ||||||| |||||||||||||||||| | ||||||||||| ||| ||||||||||    
T  37831654 ttttcttagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaa 37831595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 41148556 - 41148615
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||||||||||||||| ||||||||| | |  |||||||||||| ||||||||||||||    
T  41148556 gttaggggaccaaaatcacaacttcttaaaatatagggggccaaaactgctattaagcct 41148615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16323041 - 16322979
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    |||||||||| |||  ||||||||||||||||| ||||||| ||||||||| ||| |||||||    
T  16323041 tattttgttatggggtcaaaatcgcaacttcttaatacttaaggggccaaaactgttattaag 16322979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30064350 - 30064416
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||| |||||||  |||||||||||||||||| | |||||||| |||||| || ||||||||||||    
T  30064350 tatttagttagggagccaaaatcgcaacttcttaaaacttagggagccaaaactactattaagccta 30064416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13388224 - 13388156
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    ||||| |||||||| |||||||| | ||||||||| || |||||||||||| |||| |||||||||||||    
T  13388224 tatttagttagggg-ccaaaatctctacttcttgaaacatagggggccaaaactgcaattaagcctaaaa 13388156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 35393921 - 35393989
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||| |||| || |||||||||||||||| ||| | ||||||||  ||| |||||||||||||||||||    
T  35393921 ttttcttagaggtccaaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcctaaaaa 35393989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 53578922 - 53578974
Alignment:
Q  18 aaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||||||||||||||| | || |||||||||||| | ||||||||||||||||    
T  53578922 aaaatcgcaacttcttaaaacatagggggccaaaacggctattaagcctaaaa 53578974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 30626645 - 30626587
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    |||||||||| | |||||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  30626645 ttttgttaggaggccaaaatcgcaatttcctgatactta-ggggccaaaactgctattaa 30626587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 35383827 - 35383764
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||| ||||||| |||||||| ||||||| ||| | ||||||||| ||| ||||||||||||||    
T  35383827 tttttttagggggccaaaatcacaacttcgtgaaagttagggggcgaaaactgctattaagcct 35383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 47742295 - 47742228
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    ||||| |||||||| |||||||||||||||| ||| || |||| || |||| |||||||||| |||||    
T  47742295 tatttagttagggggccaaaatcgcaacttcctgaaacataggtggacaaaactgctattaaacctaa 47742228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1095820 - 1095754
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||||||||| || ||||||||||    || ||||||||||||||||||| | |||||||||||||    
T  1095820 tattttgttagagggccaaaatcgcctgatcgtgatacttagggggccaaaacagctattaagccta 1095754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5303835 - 5303785
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    |||||||||| |||  ||||||||||||||| |||||||||||||| ||||    
T  5303835 tattttgttaaggggtcaaaatcgcaacttcctgatacttagggggacaaa 5303785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21552907 - 21552973
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||||||||| ||  |||||||| |||||||||| || ||||  |||||| |||||||||||||||    
T  21552907 tattttgttagagggtcaaaatcgtaacttcttgaaacataggttgccaaaactgctattaagccta 21552973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49804346 - 49804410
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||| |||||||| ||||||||||||||||||| |  |||||| | |||| |||||||||||||    
T  49804346 tatttttttaggggatcaaaatcgcaacttcttgaaatataggggtcaaaat-tgctattaagcct 49804410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 8143091 - 8143027
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||| |||||||||||||||||| | || |||| |||||||  ||| ||||||| ||||||    
T  8143091 gttaggggtccaaaatcgcaacttcttaaaacataggaggccaaaagtgcaattaagcataaaaa 8143027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 52865442 - 52865374
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||| |||| ||||||||||||||||||||| | ||||| |||||  || |||||||||| ||| ||||    
T  52865442 ttttcttagaggaccaaaatcgcaacttcttaaaacttatggggctgaaactgctattaaaccttaaaa 52865374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 55038217 - 55038153
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||||||||  ||||| ||||||||||  || |||||||||||||| |||| ||| |||||||||    
T  55038217 tattttgttcagggactaaaatcgcaagatcgtgatacttagggggtcaaaactgttattaagcc 55038153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6464325 - 6464392
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    ||||| |||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||||||    
T  6464325 tatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagcctaa 6464392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20364746 - 20364679
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  20364746 tattttgttagggggtcaaaatcgcaacttcctgatacttagggggacaaaactgctattaagcctaa 20364679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 42586044 - 42585984
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||||||  ||||||||||||||||||| || |||||||||||| |||||||||||||||    
T  42586044 gttagggggtcaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagccta 42585984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36361097 - 36361030
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    ||||| ||||||||| ||||||||||||||||||| || |||||| ||||| |||| |||||||||||    
T  36361097 tatttagttaggggatcaaaatcgcaacttcttgaaacataggggaccaaaactgcaattaagcctaa 36361030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38498183 - 38498113
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||| ||||||| | ||||| |||||||| ||||||||||| || |||| |||||||||||||||||||    
T  38498183 tatttttttagggggcgaaaattgcaacttcctgatacttaggtggtcaaaactgctattaagcctaaaaa 38498113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36501464 - 36501424
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatactta 41  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  36501464 tattttgttaggggaccaaaatcgcaacttcctgatactta 36501424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 2974894 - 2974953
Alignment:
Q  11 ggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||| |||||||||||||||| ||| | ||||||||| ||| ||||||||||||||||||    
T  2974894 gggggccaaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcctaaaa 2974953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20126502 - 20126436
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||| ||||||||  ||||||| ||||||||||| || |||||||||||| || ||||||||||||    
T  20126502 tatttagttagggggtcaaaatcacaacttcttgaaacatagggggccaaaactcctattaagccta 20126436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 35166544 - 35166610
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatactta-gggggccaaatctgctattaagcctaa 68  Q
    |||| |||||||||||||||||||||||| ||| | ||| |||||| ||| ||||||||||||||||    
T  35166544 ttttcttaggggaccaaaatcgcaacttcgtgaaagttaggggggcgaaaactgctattaagcctaa 35166610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37426704 - 37426765
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    |||||||||||||| | ||||| |||||||  ||||||||||||||||||| |||||||||||    
T  37426704 tattttgttagggg-ctaaaattgcaactttctgatacttagggggccaaaactgctattaag 37426765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 38162651 - 38162589
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||||| |||||||| ||||||||||| || ||||||||||||  ||| ||||||||||||    
T  38162651 gttaggggtccaaaatcacaacttcttgaaacatagggggccaaaagtgcaattaagcctaaa 38162589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 128306 - 128253
Alignment:
Q  13 ggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||| |||||||||||| || ||||||| |||| ||||||||||||||    
T  128306 ggaccaaaattgcaacttcttgaaacatagggggtcaaaactgctattaagcct 128253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 3333754 - 3333695
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    |||| |||||||| ||||||||||||||| ||| | ||||||||| ||| ||||||||||    
T  3333754 ttttcttaggggatcaaaatcgcaacttcatgaaagttagggggcgaaaactgctattaa 3333695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 20369448 - 20369397
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    ||||||||||||||  |||||||||| ||| |||| ||||||||||||||||    
T  20369448 caaaatcgcaactttctgatacttagcgggacaaaactgctattaagcctaa 20369397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 36798428 - 36798491
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||| |||||||||||||||||||||||   || | ||||||||| ||| ||||||||||||||    
T  36798428 ttttcttaggggaccaaaatcgcaactttgagaaagttagggggctaaaactgctattaagcct 36798491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 38498262 - 38498305
Alignment:
Q  8 ttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||    
T  38498262 ttagggggccaaaatcgcaacttcctgatatttagggggccaaa 38498305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 42586343 - 42586402
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||| |||||||||||||||||  | || | |||||||||| ||||||||||||||    
T  42586343 gttagggggccaaaatcgcaacttctgtaaacatggggggccaaaactgctattaagcct 42586402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12166869 - 12166799
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||||||||| | ||||| |||| ||| ||||| |||||| | |||| |||||||||| ||||||||    
T  12166869 tattttgttagggggctaaaattgcaatttcatgatatttagggtgtcaaacctgctattaaacctaaaaa 12166799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22408796 - 22408866
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    ||||||||||||||  ||||||||||||||| ||| |   ||||| ||||| ||||| |||||||||||||    
T  22408796 tattttgttagggggtcaaaatcgcaacttcctgacaggcaggggaccaaaactgcttttaagcctaaaaa 22408866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 36898642 - 36898696
Alignment:
Q  3 ttttgttaggg-gaccaaaatcgcaacttcttgatacttagggggccaaatctgc 56  Q
    ||||||||||| | ||||||||||||||| || |||||||||||| |||||||||    
T  36898642 ttttgttagggaggccaaaatcgcaactttttaatacttagggggtcaaatctgc 36898696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11167937 - 11167868
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||||| ||||||| |||||||| ||| ||  ||||||||| |||| |||| || |||||||||||||||    
T  11167937 tattttcttagggggccaaaatcacaagtttgtgatacttaaggggtcaaaactactattaagcctaaaa 11167868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20126668 - 20126740
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatactta--gggggccaaatctgctattaagcctaaaaa 71  Q
    ||||| ||||||||  ||||||||||||||||| | || ||  |||||||||| || ||||||||||||||||    
T  20126668 tatttagttagggggtcaaaatcgcaacttcttaaaacatagggggggccaaaactcctattaagcctaaaaa 20126740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 20987009 - 20986944
Alignment:
Q  2 attttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||||||||| || ||||||| ||||||  |||||||||| ||| |||| |||||||||| ||||    
T  20987009 attttgttaggagatcaaaatcacaactttctgatacttagagggtcaaaactgctattaaaccta 20986944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 12406098 - 12406038
Alignment:
Q  8 ttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    ||||||| |||||||||||||||   || | ||||||||| ||| ||||||||||||||||    
T  12406098 ttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctaa 12406038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37008281 - 37008218
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagc 64  Q
    |||||||||||||| |||||||||||||||||||| || |||||||||||| ||||||||||||    
T  37008281 tattttgttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagc 37008218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 3814818 - 3814758
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||||||| |||||||| ||||||||||| || |||||||| |||||||||||||||||||    
T  3814818 gttagggggccaaaatcacaacttcttgaaacatagggggctaaatctgctattaagccta 3814758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29816422 - 29816493
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaagt 73  Q
    ||||||||| ||||||||||||||||||||||||||| ||| |||| |||| || ||||||| ||||||||||    
T  29816422 tattttgtt-ggggaccaaaatcgcaacttcttgatatttaaggggtcaaaactactattaaacctaaaaagt 29816493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 51549396 - 51549456
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||||||| |||||||||||||||||||| |||||||||||||||  ||| ||||||||||    
T  51549396 gttaggggtccaaaatcgcaacttcttgaaacttagggggccaaaattgcaattaagccta 51549456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 41915779 - 41915842
Alignment:
Q  8 ttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||| ||||||||||||||||||| |  |||||| ||||| |||||||||||||||||||    
T  41915779 ttaggggatcaaaatcgcaacttcttgaaatataggggaccaaaactgctattaagcctaaaaa 41915842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46895501 - 46895431
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    ||||| ||||| ||| ||||||||||||||||||| |  |||||||||||| ||||||||||||| |||||    
T  46895501 tatttagttagaggatcaaaatcgcaacttcttgaaatatagggggccaaaactgctattaagccaaaaaa 46895431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 3815052 - 3815112
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||||||| |||||||||||||||||||| || ||||||  |||| |||||||||||||||    
T  3815052 gttagggggccaaaatcgcaacttcttgaaacataggggttcaaaactgctattaagccta 3815112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 10532263 - 10532211
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    ||||||||||||||| | |||||||||||| |||| |||||||||||||||||    
T  10532263 caaaatcgcaacttcctaatacttagggggtcaaaactgctattaagcctaaa 10532211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 12075269 - 12075328
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||| |||||||||||||||||  | || |||||||||||| ||||||||||||||    
T  12075269 gttagggggccaaaatcgcaacttctgtaaacatagggggccaaaactgctattaagcct 12075328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 367169 - 367235
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||||||||||||| ||||||||||||| |||||| |  ||||||  |||| |||||||||||||||    
T  367169 tattttgttagggggccaaaatcgcaacctcttgaaatataggggatcaaaactgctattaagccta 367235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1484434 - 1484384
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    ||||||||||| || ||||||||||||||||  ||||||||||||||||||    
T  1484434 tattttgttagagggccaaaatcgcaacttccagatacttagggggccaaa 1484384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 3612445 - 3612503
Alignment:
Q  8 ttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||| |||||||||| ||||||||||| ||||||||| | ||| ||||||||||||||    
T  3612445 ttaggagaccaaaatctcaacttcttgaaacttaggggactaaaactgctattaagcct 3612503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10231126 - 10231176
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    ||||||||||| || ||||||||| |||||||| |||||||||||||||||    
T  10231126 tattttgttagagggccaaaatcgaaacttcttaatacttagggggccaaa 10231176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13575152 - 13575213
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    |||||||||| ||| ||||||||||| |||| ||||||||||||||| ||| |||||||||||    
T  13575152 tattttgttatggg-ccaaaatcgcatcttcctgatacttagggggctaaaactgctattaag 13575213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40876995 - 40877057
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    ||||| |||||||| |||||||||||||||||||  || |||||||||||| |||| ||||||    
T  40876995 tatttagttagggggccaaaatcgcaacttcttggaacatagggggccaaaactgcaattaag 40877057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 46895806 - 46895855
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||||||||||||||||| || |||||||||||| |||| |||||||||    
T  46895806 caaaatcgcaacttcttgaaacatagggggccaaaactgcaattaagcct 46895855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 7058379 - 7058423
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    |||||||| |||||||||||||||||||| || ||||||||||||    
T  7058379 gttaggggtccaaaatcgcaacttcttgaaacatagggggccaaa 7058423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 12075014 - 12074958
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    ||||||||  ||||||||||||||||||| || ||||| |||||| |||||||||||    
T  12075014 gttagggggtcaaaatcgcaacttcttgaaacatagggagccaaaactgctattaag 12074958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 23953116 - 23953160
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctatta 61  Q
    ||||||||||||||||||| || |||||||||||| |||||||||    
T  23953116 caaaatcgcaacttcttgaaacatagggggccaaaactgctatta 23953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29816180 - 29816117
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||||||||||||| ||||||   ||||||| |||||||||||||| ||||  ||||||||||||||    
T  29816180 tattttgttagggggccaaaa---caacttcctgatacttagggggtcaaaattgctattaagccta 29816117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39384577 - 39384645
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||| ||||| | ||||| |||||||||| ||||||||||||| ||||| || || |||||||||||    
T  39384577 tattttattaggaggccaaattcgcaacttcctgatacttaggggaccaaaactactgttaagcctaaa 39384645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 35820110 - 35820169
Alignment:
Q  9 taggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    |||||| ||||||||||||  |  ||||||||||||||||||| |||| |||||||||||    
T  35820110 tagggggccaaaatcgcaagattgtgatacttagggggccaaaactgcaattaagcctaa 35820169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 39384286 - 39384235
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    |||| |||||||||| |||||||||||| ||||||  |||||||||||||||    
T  39384286 caaactcgcaacttcctgatacttagggagccaaaattgctattaagcctaa 39384235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 43117312 - 43117249
Alignment:
Q  8 ttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||| ||||||||||||||||||||||| || |||| ||| ||| ||||||||||  |||||||    
T  43117312 ttagaggaccaaaatcgcaacttcttgaaacataggtggctaaaactgctattaaatctaaaaa 43117249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 1406630 - 1406684
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    ||||||||||| ||| |||||||||| ||||||||  | ||||||||||||||||    
T  1406630 caaaatcgcaatttcctgatacttagagggccaaaaatactattaagcctaaaaa 1406684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 1484676 - 1484734
Alignment:
Q  4 tttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    |||||||||||  ||||||| ||||||| | |||||||| |||||||| ||||||||||    
T  1484676 tttgttagggggtcaaaatcacaacttcctaatacttagagggccaaaactgctattaa 1484734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10532507 - 10532569
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    ||||||||| | || ||||||||| |||||| | |||| |||||||||||| |||||||||||    
T  10532507 tattttgttggagggccaaaatcgtaacttcctaatacatagggggccaaaactgctattaag 10532569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 25085447 - 25085393
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    ||||||||||||||  ||| | ||||||||| ||| |||||||||||||||||||    
T  25085447 caaaatcgcaactttatgaaagttagggggcgaaaactgctattaagcctaaaaa 25085393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 25486479 - 25486529
Alignment:
Q  18 aaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    |||||||||||||| ||| | ||||||||| ||| ||||||||||||||||    
T  25486479 aaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcctaa 25486529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 39642249 - 39642199
Alignment:
Q  16 ccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||||| ||| | ||||||||| ||| ||||||||||||||    
T  39642249 ccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcct 39642199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10230850 - 10230786
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||| | ||| | |||||||| | ||||||||||||||||| ||| ||||||||||    
T  10230850 tattttgttaggggtcgaaatt-gcaacttccttatacttagggggccaaaactgttattaagcct 10230786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 31651386 - 31651337
Alignment:
Q  13 ggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    ||||||||||||||||||  | ||||||| ||||||||| ||||||||||    
T  31651386 ggaccaaaatcgcaactttctaatacttatggggccaaagctgctattaa 31651337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 23220820 - 23220880
Alignment:
Q  10 aggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    ||||||||||||||| |||||| | | | ||||||||| ||| ||||||| ||||||||||    
T  23220820 aggggaccaaaatcgtaacttcgtaaaagttagggggcgaaaactgctatcaagcctaaaa 23220880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14816047 - 14816113
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||| |||||||| |||||||||||||||||||| || |||||||||||| |||||||||||||||    
T  14816047 tatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctattaagccta 14816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23993909 - 23993977
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||||||||||| ||||||| |||||||||| |||||||||| |||||| |||||||||| ||||||    
T  23993909 tattttgttagggggccaaaattgcaacttcttaatacttagggagccaaaactgctattaaacctaaa 23993977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35500341 - 35500411
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||||||||| |||||||||||||||||||| || |||||  ||||| || ||||||||||||||||    
T  35500341 tattttgttagggggccaaaatcgcaacttcttgaaacatagggccccaaaactactattaagcctaaaaa 35500411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20650434 - 20650365
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||||| ||||||| |||||||| ||||||||||| ||||||||||| ||| ||||||| ||||||||||    
T  20650434 tattttcttagggggccaaaatctcaacttcttgaaacttagggggctaaaactgctatgaagcctaaaa 20650365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14815762 - 14815698
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    ||||| |||| |||||||||| ||||||||||||| || |||||||||||| |||||||||||||    
T  14815762 tatttagttaagggaccaaaaccgcaacttcttgaaacatagggggccaaaactgctattaagcc 14815698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12802454 - 12802519
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||| |||||  |||||||||||||||||||||| || ||||| |||||| ||||||||||||||    
T  12802454 tatttagttagaagaccaaaatcgcaacttcttgaaacatagggagccaaaactgctattaagcct 12802519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14289329 - 14289265
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||| |||||||||||||||| ||||||||||| ||  ||| ||||||||||||||    
T  14289329 tattttgttagggggccaaaatcgcaacttcatgatacttaggagg-aaaaactgctattaagcct 14289265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 8030184 - 8030125
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||||| |||||||||  | || |||||||||||| ||||||||||||||    
T  8030184 gttaggggaccaaaattgcaacttctgtaaacatagggggccaaaactgctattaagcct 8030125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 14489463 - 14489529
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||| ||||||| |||||||||||||||| ||| | ||||||||| ||| ||||||||||||||||||    
T  14489463 ttttcttagggg-ccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcctaaaa 14489529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 15023090 - 15023152
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||| |||||||  ||||||| ||||||||||| | ||||||||||||| |||||||||||||    
T  15023090 ttttcttagggggtcaaaatcacaacttcttgaaagttagggggccaaaactgctattaagcc 15023152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10522707 - 10522638
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||||| |||| ||||||||||| ||||||||||||||||| ||  | ||| ||||||||||||| ||||    
T  10522707 tattttattagtggaccaaaatcacaacttcttgatacttaaggaccaaaaactgctattaagccaaaaa 10522638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29370780 - 29370719
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    |||||||| |||||| ||||||||||||||||| | || |||||||||||| || |||||||    
T  29370780 tattttgtcaggggatcaaaatcgcaacttcttaaaacatagggggccaaaacttctattaa 29370719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31227138 - 31227199
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    ||||||||||| ||  ||||||||||||||| ||||| ||||| ||||||| ||||||||||    
T  31227138 tattttgttagagggtcaaaatcgcaacttcctgatatttaggaggccaaaactgctattaa 31227199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 4856757 - 4856709
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    ||||||||||||||||||| || || ||||||||| |||||||||||||    
T  4856757 caaaatcgcaacttcttgaaacataaggggccaaaactgctattaagcc 4856709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 11363940 - 11363876
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||  |||||||||||||||||||| || ||||||||||||  ||| |||||||| |||||    
T  11363940 gttagggagccaaaatcgcaacttcttgaaacatagggggccaaaaatgcaattaagccaaaaaa 11363876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 34679342 - 34679410
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||| ||||||| |||||||| ||||||| ||| | ||||||||| ||| ||||||||||||| |||||    
T  34679342 tttttttagggggccaaaatcacaacttcgtgaaagttagggggcaaaaactgctattaagccaaaaaa 34679410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 14983956 - 14984015
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||||||||||||||||||||||||| | || || |||||||||  ||| |||||||||    
T  14983956 gttaggggaccaaaatcgcaacttcttaaaacatacggggccaaaagtgcaattaagcct 14984015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17850484 - 17850547
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagc 64  Q
    ||||| |||||| | |||||||||||||||||| | || |||||||||||| || |||||||||    
T  17850484 tatttagttaggaggccaaaatcgcaacttcttaaaacatagggggccaaaactactattaagc 17850547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 20662571 - 20662516
Alignment:
Q  9 taggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagc 64  Q
    ||||||||||||||||||||||||| | ||||||||||  ||| || |||||||||    
T  20662571 taggggaccaaaatcgcaacttctttaaacttagggggttaaaactactattaagc 20662516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 36177343 - 36177405
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||| ||||||| |||||||||||||||||||| ||||| ||||| ||| ||| ||||||||||    
T  36177343 ttttcttagggg-ccaaaatcgcaacttcttgaaacttaaggggctaaaactgttattaagcct 36177405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 44078545 - 44078608
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    ||||||| ||||||||||||||||||| | || ||||||||||||  ||| ||||| |||||||    
T  44078545 gttagggaaccaaaatcgcaacttcttaaaacatagggggccaaaagtgcaattaaacctaaaa 44078608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 44617989 - 44618052
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||| ||| |||||||||||||||||||||||| | |||| |||  ||| ||||||||||||||    
T  44617989 ttttcttaagggaccaaaatcgcaacttcttgaaagttagagggttaaaactgctattaagcct 44618052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 21631876 - 21631814
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||||| |||||||||||||||| ||| || ||||||||||||  ||| ||||| ||||||    
T  21631876 gttagggggccaaaatcgcaacttcatgaaacatagggggccaaaagtgcaattaaacctaaa 21631814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 36177043 - 36176981
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||| ||||||| | |||||||||||||| ||| |||||| |||| ||| |||||||||||||    
T  36177043 tttttttagggggctaaaatcgcaacttcgtgaaacttagagggctaaaactgctattaagcc 36176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39672671 - 39672736
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||| |||| |||||||||||| ||||||||||| || || ||||||||| |||| ||||||||||    
T  39672671 tatttagttatgggaccaaaatcacaacttcttgaaacata-ggggccaaaactgcaattaagccta 39672736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23993786 - 23993722
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||||||| || |||||||||||||||||  |||||||||||||   ||| ||||||||||||||    
T  23993786 tattttgtt-ggagaccaaaatcgcaactttctgatacttaggggataaaaactgctattaagcct 23993722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35500104 - 35500039
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||||||||| ||  | ||||| |||||| |||| || |||||||||||| ||||||||||||||    
T  35500104 tattttgttagtgggtcgaaatcacaactttttgaaacatagggggccaaaactgctattaagcct 35500039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 52295 - 52355
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||||||| |||||||||||| ||||| | || ||||||||||||  ||| ||||||||||    
T  52295 gttagggggccaaaatcgcaaattcttaaaacatagggggccaaaagtgcaattaagccta 52355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 19206204 - 19206140
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||| ||||||| |||||||||||||||  ||| | ||||||||| |||  ||||||||||||||    
T  19206204 tttttttagggggccaaaatcgcaactttgtgaaaattagggggcgaaaattgctattaagccta 19206140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 28719375 - 28719331
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    |||||||| |||||||||||||||||| | || ||||||||||||    
T  28719375 gttagggggccaaaatcgcaacttcttaaaacatagggggccaaa 28719331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31226915 - 31226855
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctatta 61  Q
    ||||||||||  || |||| ||| ||||||  ||||||||||||||||||| |||||||||    
T  31226915 tattttgttacagggccaagatctcaactttctgatacttagggggccaaaactgctatta 31226855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9498973 - 9498905
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||||||| |||  ||||||||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  9498973 tattttgttatggggtcaaaatcgcaacttcctgatacttagggggccaaaactgttattaagcctaaa 9498905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 755961 - 755902
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||| |||||||||||||||||||| || ||| |||||||| ||||||||||||||    
T  755961 gttagggggccaaaatcgcaacttcttgaaacatagagggccaaaactgctattaagcct 755902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 11289307 - 11289361
Alignment:
Q  12 gggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||||| |||||||||||||||| || |||||||||||| ||||||||||||||    
T  11289307 gggaccagaatcgcaacttcttgaaacatagggggccaaagctgctattaagcct 11289361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29919138 - 29919069
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||||||||| ||||||||||||  || |||||||||||||| |||| ||||||||||| |||||||    
T  29919138 tattttgttagggg-ccaaaatcgcaagatcgtgatacttagggggtcaaaactgctattaagtctaaaaa 29919069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45522441 - 45522511
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||||||||| | |||||||||||||||| | || ||||||| |||| ||||| |||||||||||||    
T  45522441 tattttgttagggggctaaaatcgcaacttcttaaaacatagggggtcaaaactgcttttaagcctaaaaa 45522511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4695004 - 4695069
Alignment:
Q  1 tattttgtta-ggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||||||||| |||| |||||||| |||||| |||||||||||||||||||| ||||| |||||||    
T  4695004 tattttgttaagggggccaaaatcacaactttttgatacttagggggccaaaactgcttttaagcc 4695069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35795581 - 35795646
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||| |||||||| |||||||| ||||||||||| || |||||||||||| |||| |||||||||    
T  35795581 tatttagttagggggccaaaatcacaacttcttgaaacatagggggccaaaactgcaattaagcct 35795646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 2802706 - 2802642
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||| ||| |||||||||||||||||| |||| ||||||| |||| |||||||||| ||||||||    
T  2802706 gttatgggtccaaaatcgcaacttcttaatacatagggggtcaaaactgctattaaacctaaaaa 2802642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17512161 - 17512093
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    ||||| |||||||| |||||||||||||||||||| |  |||||||||||| |||| |||| |||||||    
T  17512161 tatttagttagggggccaaaatcgcaacttcttgaaatatagggggccaaaactgcaattatgcctaaa 17512093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 26889341 - 26889282
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaagttat 76  Q
    |||||| ||||||||| || || |||||||||||| ||||||||||||||||||| ||||    
T  26889341 caaaattgcaacttctggaaacatagggggccaaaactgctattaagcctaaaaaattat 26889282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 9499223 - 9499269
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||||    
T  9499223 caaaatcgcaacttcgtaatacttagggggccaaaactgctattaag 9499269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 41602878 - 41602928
Alignment:
Q  18 aaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    ||||||||||||| |||| ||||||||||| ||| ||||||||||||||||    
T  41602878 aaaatcgcaactttttgaaacttagggggctaaaactgctattaagcctaa 41602928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45163710 - 45163760
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    ||||| |||||||| |||||||||||||||||||| || ||||||||||||    
T  45163710 tatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaa 45163760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 18092960 - 18092907
Alignment:
Q  16 ccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||||||||||||||||  ||||||||||| ||| ||||||||||| |||||    
T  18092960 ccaaaatcgcaacttcttgtaacttagggggctaaaactgctattaagtctaaa 18092907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 756113 - 756173
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    ||||| || |||||||||||||||||| | || ||||| |||||| |||||||||||||||    
T  756113 gttagagggccaaaatcgcaacttcttaaaacatagggagccaaaactgctattaagccta 756173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 4461732 - 4461676
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    ||||||||||||||||||||| || |||| || || ||||||||| |||||||||||    
T  4461732 gttaggggaccaaaatcgcaaatttttgaaacataaggggccaaaactgctattaag 4461676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 20853440 - 20853372
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||| |||||||  |||||||||||||||  || | ||||||||| ||| |||||||||||||||||||    
T  20853440 tttttttagggggtcaaaatcgcaacttcaagaaagttagggggctaaaactgctattaagcctaaaaa 20853372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 23936337 - 23936293
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    |||||||| |||||||||||||||||||| || ||||||||||||    
T  23936337 gttagggggccaaaatcgcaacttcttgaaacatagggggccaaa 23936293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29196612 - 29196680
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    ||||||||||| |||||| |||||||||||||| | |  |||||||||||| ||| |||||| ||||||    
T  29196612 tattttgttagaggaccataatcgcaacttcttaaaatatagggggccaaaactgttattaaacctaaa 29196680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2044738 - 2044672
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaa 68  Q
    |||||||||| ||| || ||||||||| ||| ||||||||| ||||||||| |||||||||| |||||    
T  2044738 tattttgttatggggccgaaatcgcaatttcatgatactta-ggggccaaaactgctattaaacctaa 2044672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5899274 - 5899211
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttag-ggggccaaatctgctattaag 63  Q
    |||||||||||||  || ||||||||||||| |||||||||| ||||||||| ||| |||||||    
T  5899274 tattttgttagggagccgaaatcgcaacttcctgatacttaggggggccaaaactgttattaag 5899211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 17070969 - 17070906
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||| ||||||| |||||||||||||||| ||| | ||| ||||| ||| ||||||||||||||    
T  17070969 tttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcct 17070906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 17577303 - 17577366
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||| ||||||| |||||||||||||||| ||| | ||| ||||| ||| ||||||||||||||    
T  17577303 tttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcct 17577366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 27545607 - 27545666
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    |||| ||||||| |||||||||||||||| ||||| ||||||||| ||| | ||||||||    
T  27545607 ttttcttagggggccaaaatcgcaacttcgtgatagttagggggcaaaaaccgctattaa 27545666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1003795 - 1003864
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    ||||| |||||||  ||||||| |||||||||||| || ||||||| |||| ||| |||||||||||||||    
T  1003795 tatttagttagggagccaaaattgcaacttcttgaaacataggggg-caaaactgttattaagcctaaaaa 1003864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 14170479 - 14170421
Alignment:
Q  8 ttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||||| |||||||||||||||||| | || ||||||| |||| |||| |||||||||    
T  14170479 ttagggggccaaaatcgcaacttcttaaaacatagggggtcaaaactgcaattaagcct 14170421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29219373 - 29219435
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    |||||||||||||| | |||||||||||||| | |||||||||||| || |  ||||||||||    
T  29219373 tattttgttagggggctaaaatcgcaacttcctaatacttagggggtcagaattgctattaag 29219435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 45308512 - 45308454
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    ||||||||  ||||||||||||||||||| || ||||||||||||  ||| ||||||||    
T  45308512 gttaggggttcaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcc 45308454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 6041137 - 6041084
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||||||| |||||||||| || |||||||||||| ||| ||||||||| ||||    
T  6041137 caaaatcgtaacttcttgaaacatagggggccaaaactgttattaagccaaaaa 6041084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 6044769 - 6044716
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||||||| |||||||||| || |||||||||||| ||| ||||||||| ||||    
T  6044769 caaaatcgtaacttcttgaaacatagggggccaaaactgttattaagccaaaaa 6044716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8409815 - 8409879
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||| |||||||||||||||||| | || ||  ||| |||| ||||||||||||||    
T  8409815 tattttgttaggggcccaaaatcgcaacttcttaaaacata-tgggtcaaaactgctattaagcct 8409879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 23475672 - 23475623
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    ||||||| ||||||||||| || |||||||||||| |||| |||||||||    
T  23475672 caaaatcacaacttcttgaaacatagggggccaaaactgcaattaagcct 23475623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29340832 - 29340771
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaa 62  Q
    |||||||||| ||| |||||||||||| || || | || |||||||||||| ||||||||||    
T  29340832 tattttgttaaggggccaaaatcgcaaattatttaaacatagggggccaaaactgctattaa 29340771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 5180743 - 5180691
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    ||||||||||| ||| ||||| |||||||| |||| |||| ||||||||||||    
T  5180743 caaaatcgcaagttcatgatagttagggggtcaaaactgcaattaagcctaaa 5180691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 16982688 - 16982624
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||| ||||||||||||||| |||||||| ||| | ||||||||  ||| ||||||| |||||||    
T  16982688 ttttcttaggggaccaaaattgcaacttcgtgaaagttagggggtgaaaactgctatcaagccta 16982624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 18896483 - 18896423
Alignment:
Q  9 taggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||||||||||||||||  |  |||| |||||||| ||||| |||| ||||||||||||    
T  18896483 taggggaccaaaatcgcaagattgtgatgcttaggggaccaaaactgcaattaagcctaaa 18896423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17702 - 17634
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||||||||||   ||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||    
T  17702 tattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaagcataaa 17634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 17940 - 17994
Alignment:
Q  16 ccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||||||||||||||  |||||||||| ||  |||| ||||||||||||||||||    
T  17940 ccaaaatcgcaactttatgatacttagaggatcaaaactgctattaagcctaaaa 17994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2164707 - 2164775
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||||||||||   ||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||    
T  2164707 tattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaagcataaa 2164775  T

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Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2176340 - 2176408
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaa 69  Q
    |||||||||||||   ||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||    
T  2176340 tattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctattaagcataaa 2176408  T

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Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12799042 - 12799112
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    |||||||||||| |||||||||||||||||||||| |  ||| |||| ||| |||||||||| ||||||||    
T  12799042 tattttgttaggtgaccaaaatcgcaacttcttgaaatatagagggctaaaactgctattaaacctaaaaa 12799112  T

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Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30369847 - 30369784
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||||||||||||||| |||||||||||||||| | || || ||||||||| |||||||||||||    
T  30369847 tattttgttaggggac-aaaatcgcaacttcttaaaacataaggggccaaaactgctattaagcc 30369784  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 238978 - 238924
Alignment:
Q  17 caaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaa 71  Q
    ||||||||||||||| ||| | ||||||||| ||| |||||||||||||||||||    
T  238978 caaaatcgcaacttcgtgaaaattagggggcgaaaactgctattaagcctaaaaa 238924  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 28574562 - 28574620
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||||||| |||||||||||||||||||| || ||||||||||||  ||| ||||||||    
T  28574562 gttagggggccaaaatcgcaacttcttgaaacatagggggccaaaagtgcaattaagcc 28574620  T

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Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12798790 - 12798726
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||| | | |||||||||||||||||| |  |||||||||||| ||||||||||||||    
T  12798790 tattttgttaggag-caaaaatcgcaacttcttgaaatatagggggccaaaactgctattaagcct 12798726  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 9070136 - 9070184
Alignment:
Q  18 aaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||||||| || ||||||||||||  |||||||||||||    
T  9070136 aaaatcgcaacttcttgaaacatagggggccaaaaatgctattaagcct 9070184  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 2017230 - 2017171
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||| |||||||| ||||||||||| ||||||||| |||||  ||| |||||||||    
T  2017230 gttaggggtccaaaatcacaacttcttgaaacttaggggaccaaaaatgcaattaagcct 2017171  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 12766466 - 12766529
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||| ||||||| |||||||||||||||| ||| | ||||||||  ||| ||||||||||||||    
T  12766466 tttttttagggggccaaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcct 12766529  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 2164469 - 2164415
Alignment:
Q  16 ccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||||||||||||||  |||||||||| ||  |||| ||||||||||||||||||    
T  2164469 ccaaaatcgcaactttatgatacttagaggatcaaaactgctattaagcctaaaa 2164415  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 2176102 - 2176048
Alignment:
Q  16 ccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    |||||||||||||||  |||||||||| ||  |||| ||||||||||||||||||    
T  2176102 ccaaaatcgcaactttatgatacttagaggatcaaaactgctattaagcctaaaa 2176048  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 11623217 - 11623159
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcc 65  Q
    |||||||| |||||||||||||||||||| || ||| ||||||||  ||| ||||||||    
T  11623217 gttagggggccaaaatcgcaacttcttgaaacatagagggccaaaagtgcaattaagcc 11623159  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 12203950 - 12203906
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    ||||||||  ||||||||||||||||||| || ||||||||||||    
T  12203950 gttagggggtcaaaatcgcaacttcttgaaacatagggggccaaa 12203906  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 22516031 - 22515987
Alignment:
Q  7 gttaggggaccaaaatcgcaacttcttgatacttagggggccaaa 51  Q
    |||||||| |||||||||||||||||||| || |||||| |||||    
T  22516031 gttaggggtccaaaatcgcaacttcttgaaacataggggaccaaa 22515987  T

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Target: scaffold0725 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 6692 - 6750
Alignment:
Q  12 gggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    ||||| ||||||||||||| |||| ||||||||||| ||| ||||||||||||||||||    
T  6692 gggactaaaatcgcaacttgttgaaacttagggggctaaaactgctattaagcctaaaa 6750  T

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Target: scaffold0092 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37847 - 37783
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcct 66  Q
    |||||||||||||| | |||||||||||||| ||||||||||||||| ||| ||||| ||||||||    
T  37847 tattttgttaggggtc-aaaatcgcaacttcctgatacttagggggctaaaactgctgttaagcct 37783  T

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Target: scaffold1088 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 2081 - 2012
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaaag 72  Q
    ||||||||| || | ||||| |||||||||||||| |||||||| |||| |||||||||| ||| |||||    
T  2081 ttttgttagagggctaaaattgcaacttcttgatagttagggggtcaaaactgctattaaaccttaaaag 2012  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 162293 - 162355
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaag 63  Q
    |||||||||||||| |||||||| || ||||   ||||||| ||||||||| |||||||||||    
T  162293 tattttgttagggggccaaaatcacatcttcccaatacttaaggggccaaaactgctattaag 162355  T

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Target: scaffold0468 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10415 - 10346
Alignment:
Q  1 tattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagcctaaaa 70  Q
    ||||| |||||||| ||||||| |||| ||||| | || |||| ||||||| ||||||||||||| ||||    
T  10415 tatttagttagggggccaaaattgcaatttcttaaaacataggaggccaaaactgctattaagccaaaaa 10346  T

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Target: scaffold1458 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 1533 - 1469
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||| ||||||| |||||||| ||||||  ||| | ||||||||| ||| |||||||||||||||    
T  1533 ttttcttagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagccta 1469  T

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Target: scaffold0515 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 3701 - 3637
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||| ||||||| |||||||||||||||   || | ||||||||| ||| |||||||||||||||    
T  3701 ttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 3701 - 3637
Alignment:
Q  3 ttttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctattaagccta 67  Q
    |||| ||||||| |||||||||||||||   || | ||||||||| ||| |||||||||||||||    
T  3701 ttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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