View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8250_low_27 (Length: 265)
Name: NF8250_low_27
Description: NF8250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8250_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 41702746 - 41702516
Alignment:
| Q |
11 |
cagagagccgaacagcagcaccagcagctgctgaaacctgcataaaacaacagcttcggctgcaaagcagcgcccaaacctccctgcactgtcaagaacc |
110 |
Q |
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| T |
41702746 |
cagagagccgaacagcagcaccagcagctgctgaaacctgcataaaacaacagcttcggctgcaaagcagcgcccaaacctccctgcgctgtcaagaacc |
41702647 |
T |
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| Q |
111 |
agcagcagctgccactatgacagcaacacagcagaccaagcacacggcaacacaactgccaaagacagacaccgcaccaaaccagacctcgcaacagcac |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41702646 |
agcagcagctgccactatgacagcaacacagcagaccaagcacgcggcaacacaactgccaaagacagacaccgcaccaaaccagacctcgcaacagcac |
41702547 |
T |
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| Q |
211 |
caaccccctgaacctccgagcctcaccgctg |
241 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
41702546 |
caaccccctgaacctccgagcctcaccgctg |
41702516 |
T |
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