View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8250_low_31 (Length: 247)

Name: NF8250_low_31
Description: NF8250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8250_low_31
NF8250_low_31
[»] chr3 (18 HSPs)
chr3 (1-228)||(3354610-3354838)
chr3 (109-224)||(3724063-3724179)
chr3 (1-84)||(3354910-3354993)
chr3 (2-83)||(33687611-33687692)
chr3 (2-77)||(16883760-16883835)
chr3 (159-225)||(3216463-3216529)
chr3 (2-84)||(33687940-33688022)
chr3 (11-84)||(49579147-49579220)
chr3 (1-80)||(1429512-1429591)
chr3 (159-230)||(3296727-3296798)
chr3 (1-84)||(50420846-50420929)
chr3 (10-80)||(16883501-16883571)
chr3 (6-77)||(26465980-26466052)
chr3 (1-84)||(33381515-33381599)
chr3 (160-228)||(3203682-3203752)
chr3 (1-76)||(43902545-43902620)
chr3 (9-77)||(17258163-17258231)
chr3 (1-81)||(37755162-37755242)
[»] chr1 (21 HSPs)
chr1 (2-79)||(39384553-39384630)
chr1 (9-77)||(1406597-1406665)
chr1 (1-84)||(13575127-13575209)
chr1 (1-84)||(10532482-10532565)
chr1 (1-79)||(1484381-1484459)
chr1 (2-84)||(1484649-1484731)
chr1 (18-84)||(37008223-37008289)
chr1 (1-84)||(29816125-29816205)
chr1 (2-80)||(10231102-10231180)
chr1 (2-84)||(39384244-39384325)
chr1 (3-84)||(10532221-10532301)
chr1 (2-68)||(84246-84312)
chr1 (2-80)||(10230797-10230874)
chr1 (2-52)||(51690426-51690476)
chr1 (2-47)||(13574860-13574905)
chr1 (1-81)||(40876970-40877050)
chr1 (11-80)||(39411595-39411662)
chr1 (1-70)||(39411878-39411946)
chr1 (28-84)||(14979052-14979108)
chr1 (28-84)||(18632591-18632647)
chr1 (9-77)||(51549373-51549441)
[»] scaffold0286 (2 HSPs)
scaffold0286 (2-84)||(17644-17726)
scaffold0286 (2-84)||(17902-17983)
[»] chr6 (9 HSPs)
chr6 (2-84)||(2164683-2164765)
chr6 (2-84)||(2176316-2176398)
chr6 (9-69)||(1614835-1614895)
chr6 (2-66)||(12101683-12101747)
chr6 (12-80)||(1615034-1615103)
chr6 (2-84)||(2164426-2164507)
chr6 (2-84)||(2176059-2176140)
chr6 (18-84)||(12798733-12798798)
chr6 (28-84)||(238936-238992)
[»] chr4 (21 HSPs)
chr4 (2-80)||(3369857-3369935)
chr4 (17-84)||(30626590-30626656)
chr4 (2-81)||(1096525-1096604)
chr4 (12-83)||(19914975-19915046)
chr4 (2-84)||(12690061-12690143)
chr4 (2-82)||(54953732-54953810)
chr4 (4-63)||(11787312-11787371)
chr4 (4-63)||(11799479-11799538)
chr4 (9-80)||(16322987-16323058)
chr4 (2-84)||(326887-326969)
chr4 (2-84)||(1095762-1095844)
chr4 (18-84)||(25423783-25423848)
chr4 (19-80)||(5303781-5303842)
chr4 (8-84)||(30627005-30627081)
chr4 (28-84)||(37831598-37831654)
chr4 (18-84)||(5547995-5548061)
chr4 (10-84)||(11787069-11787142)
chr4 (10-84)||(11799236-11799309)
chr4 (18-84)||(47742237-47742303)
chr4 (2-44)||(48188317-48188359)
chr4 (28-84)||(14449279-14449335)
[»] chr7 (19 HSPs)
chr7 (2-84)||(27756271-27756353)
chr7 (1-80)||(24679069-24679148)
chr7 (2-84)||(35793381-35793463)
chr7 (3-84)||(21939301-21939382)
chr7 (2-84)||(24432342-24432424)
chr7 (2-84)||(35828637-35828719)
chr7 (2-84)||(35828355-35828437)
chr7 (7-84)||(24432626-24432702)
chr7 (2-78)||(15327714-15327789)
chr7 (1-84)||(43078028-43078111)
chr7 (23-84)||(9500149-9500210)
chr7 (1-77)||(10691311-10691387)
chr7 (9-77)||(44565276-44565344)
chr7 (17-84)||(28960654-28960719)
chr7 (18-77)||(30283707-30283766)
chr7 (18-84)||(28350122-28350188)
chr7 (2-80)||(35793694-35793772)
chr7 (1-58)||(43657820-43657877)
chr7 (2-82)||(15327970-15328049)
[»] chr2 (16 HSPs)
chr2 (1-84)||(31227113-31227196)
chr2 (11-84)||(23993894-23993967)
chr2 (2-68)||(14289287-14289353)
chr2 (2-84)||(3403517-3403599)
chr2 (2-84)||(31226857-31226939)
chr2 (1-84)||(14816022-14816105)
chr2 (25-84)||(20650376-20650435)
chr2 (1-84)||(23993729-23993811)
chr2 (1-84)||(35500316-35500399)
chr2 (3-84)||(37431765-37431845)
chr2 (8-80)||(35125155-35125226)
chr2 (18-84)||(17850476-17850542)
chr2 (1-50)||(13491780-13491829)
chr2 (8-84)||(10522649-10522725)
chr2 (28-84)||(14489463-14489518)
chr2 (28-84)||(15023090-15023146)
[»] chr5 (15 HSPs)
chr5 (2-84)||(38498125-38498207)
chr5 (24-84)||(20364688-20364748)
chr5 (16-84)||(37426694-37426761)
chr5 (2-84)||(20986952-20987034)
chr5 (12-84)||(12166811-12166883)
chr5 (1-84)||(6464300-6464383)
chr5 (1-84)||(11167879-11167962)
chr5 (21-84)||(38944178-38944241)
chr5 (16-66)||(36501424-36501474)
chr5 (13-82)||(22408783-22408852)
chr5 (1-66)||(36628651-36628716)
chr5 (32-77)||(38498261-38498306)
chr5 (23-84)||(33087586-33087647)
chr5 (2-79)||(37426423-37426500)
chr5 (28-84)||(3999092-3999148)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-82)||(37792-37872)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-84)||(162268-162351)
scaffold0006 (1-70)||(161734-161803)
[»] chr8 (21 HSPs)
chr8 (2-80)||(5899219-5899298)
chr8 (17-80)||(9498919-9498982)
chr8 (1-84)||(18929308-18929391)
chr8 (3-84)||(2044681-2044761)
chr8 (8-82)||(4694986-4695061)
chr8 (2-80)||(29219086-29219164)
chr8 (2-84)||(29219349-29219431)
chr8 (3-84)||(41602838-41602919)
chr8 (1-80)||(5899504-5899583)
chr8 (9-84)||(34232764-34232837)
chr8 (10-84)||(9499192-9499265)
chr8 (18-84)||(29919081-29919146)
chr8 (28-84)||(18092917-18092973)
chr8 (28-84)||(27545607-27545663)
chr8 (26-81)||(18896616-18896671)
chr8 (18-84)||(29340774-29340840)
chr8 (1-82)||(45522416-45522497)
chr8 (33-81)||(5180704-5180752)
chr8 (28-84)||(22192308-22192364)
chr8 (28-84)||(33298585-33298641)
chr8 (1-77)||(45163685-45163761)
[»] scaffold0010 (1 HSPs)
scaffold0010 (2-84)||(128141-128223)
[»] scaffold1088 (1 HSPs)
scaffold1088 (2-52)||(2096-2146)
[»] scaffold0172 (2 HSPs)
scaffold0172 (1-84)||(9862-9944)
scaffold0172 (1-52)||(9583-9634)
[»] scaffold0025 (1 HSPs)
scaffold0025 (2-81)||(151591-151669)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-84)||(10357-10440)
[»] scaffold0062 (1 HSPs)
scaffold0062 (18-87)||(46079-46148)


Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 3354838 - 3354610
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctataaatttacaactcccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3354838 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctataaatttacaactcccc 3354739  T
Q  101 tctacatatattgaatgaaagtggctatattctcatcatgcatgtttatgcatgtcta-gtgaacagattcaaattcttcatgttgctgctcaagagaag 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  3354738 tctacatatattgaatgaaagtggctatattctcatcatgcatgtttatgcatggctaggtgaacagattcaaattcttcatgttgctgctcaagagaag 3354639  T
Q  200 atgcactttgtctctttattccttctatg 228  Q
    |||||||||||||||||||||||||||||    
T  3354638 atgcactttgtctctttattccttctatg 3354610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 3724063 - 3724179
Alignment:
Q  109 tattgaatgaaagtggctatattctcatcatgcatgtttatgcatgtctag-tgaacagattcaaattcttcatgttgctgctcaagagaagatgcactt 207  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3724063 tattgaatgaaagtggctatattctcatcatgcatgtttgtgcaagtcttgctgaacagattcaaattcttcatgttgctgctcaagagaagatgcactt 3724162  T
Q  208 tgtctctttattccttc 224  Q
    |||||||||||||||||    
T  3724163 tgtctctttattccttc 3724179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3354910 - 3354993
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||| ||||||||||||||||||||||| ||||| | |||||||||||| ||| ||||||||||||||||||| |||||||    
T  3354910 atacttagggggctggattgtattttattttgttaggggaccaaaatcgcaacttcttgatacttagggggccaaatctgctat 3354993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 33687692 - 33687611
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgcta 83  Q
    |||||| ||||||||||||||||||||||| ||||| ||| |||||||||| || ||||||||||||||||||||| |||||    
T  33687692 tacttagggggctggattgtattttattttgttagggggctaaaatcgcaactttctgatacttagggggccaaaaatgcta 33687611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 16883760 - 16883835
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 77  Q
    |||||| ||||||||||||||||||| ||| ||||| || ||||||||||| || |||||||||||||||||||||    
T  16883760 tacttagggggctggattgtattttaatttgttagggggtcaaaatcgcaactttctgatacttagggggccaaaa 16883835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 3216463 - 3216529
Alignment:
Q  159 gtgaacagattcaaattcttcatgttgctgctcaagagaagatgcactttgtctctttattccttct 225  Q
    ||||||||||||||||||| |||| |||||||||  ||||||||||||||||||||| |||||||||    
T  3216463 gtgaacagattcaaattctccatgctgctgctcacaagaagatgcactttgtctcttcattccttct 3216529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 33687940 - 33688022
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||| ||||||||||||||| ||||| || || |||||||| || ||||||||||| | ||||||||||||||    
T  33687940 tacttagggggctgaattgtattttattttgttagggggtcagaatcgcaactttctgatacttagagagccaaaactgctat 33688022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 49579147 - 49579220
Alignment:
Q  11 ggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| ||||||||||||||| ||||| | | |||||||||| || |||||||||| |||| ||||||||||||    
T  49579147 ggctgaattgtattttattttgttaggggactaaaatcgcaactttctgatacttaaggggtcaaaactgctat 49579220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1429512 - 1429591
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    ||||||| | |||||||||||| ||  |||||||||||||||||||||| || ||| |||| ||||| ||| ||||||||    
T  1429512 atacttaggaggctggattgtaattgtttttcttaggaggccaaaatcgtaagttcatgatgcttagagggtcaaaactg 1429591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 3296798 - 3296727
Alignment:
Q  159 gtgaacagattcaaattcttcatgttgctgctcaagagaagatgcactttgtctctttattccttctatgat 230  Q
    ||||||||||||||| ||| |||| |||  ||||| | ||||||||||||||||||| ||||||||| ||||    
T  3296798 gtgaacagattcaaaatctccatgctgcacctcaaaacaagatgcactttgtctcttcattccttctttgat 3296727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 50420846 - 50420929
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||  ||||| |||||| ||||||||| ||| | || ||||||||||| ||| | ||||||||| |||||||||||||||    
T  50420846 atacttagagggctagattgtgttttattttgttaaggggtcaaaatcgcaacttcataatacttaggaggccaaaactgctat 50420929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 16883571 - 16883501
Alignment:
Q  10 gggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    |||||| ||| ||||||||||| ||||  || ||||||| ||| |||||||||||||||||| ||||||||    
T  16883571 gggctgaattatattttattttgttagagggtcaaaatcacaacttcctgatacttagggggtcaaaactg 16883501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 26466052 - 26465980
Alignment:
Q  6 taaggggctggattgtattttattttctta-ggaggccaaaatcgcaatttcctgatacttagggggccaaaa 77  Q
    |||||||||| ||||||||||||||| ||| || |||||||||||||| ||| | |||||||| ||| |||||    
T  26466052 taaggggctgaattgtattttattttgttaggggggccaaaatcgcaacttcataatacttagtgggtcaaaa 26465980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33381599 - 33381515
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttag-ggggccaaaactgctat 84  Q
    ||||||| || |||| ||||||||||||||| ||| | || |||||| |||| ||||| |||||||| ||||||| |||||||||    
T  33381599 atacttagggagctgaattgtattttattttgttaaggggtcaaaattgcaacttcctaatacttaggggggccataactgctat 33381515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 3203682 - 3203752
Alignment:
Q  160 tgaacagattcaaattcttcatgttgctgctcaagagaagatgcactttg--tctctttattccttctatg 228  Q
    |||||||||||||||||| ||||| || |||||  ||||||||||| |||  |||||| ||||||||||||    
T  3203682 tgaacagattcaaattctccatgtcgcagctcacaagaagatgcaccttgtctctcttcattccttctatg 3203752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43902620 - 43902545
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaa 76  Q
    ||||||| |||| | |||||||||||||||| ||| | |||||||||| ||| ||||| ||||||| |||| ||||    
T  43902620 atacttagggggttagattgtattttattttgttaaggggccaaaatcacaacttcctaatacttaaggggtcaaa 43902545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 17258163 - 17258231
Alignment:
Q  9 ggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 77  Q
    |||||||  |||||||||| ||| ||||| | |||||||||||| ||| ||| || |||||||||||||    
T  17258163 ggggctgttttgtattttaatttgttaggggtccaaaatcgcaacttcttgaaacatagggggccaaaa 17258231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37755162 - 37755242
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgc 81  Q
    ||||||||||||| |  || || |||||||  ||||| ||| |||||||||| ||| ||| || |||||||||||||||||    
T  37755162 atacttaaggggcggttttatagtttatttagttagggggctaaaatcgcaacttcatgaaacatagggggccaaaactgc 37755242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 39384553 - 39384630
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaact 79  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  39384553 tacttagggggctggattgtattttattttattaggaggccaaattcgcaacttcctgatacttaggggaccaaaact 39384630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 1406597 - 1406665
Alignment:
Q  9 ggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 77  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||    
T  1406597 ggggctggattgtattttattttattaggaggtcaaaatcgcaatttcctgatacttagagggccaaaa 1406665  T

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Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13575127 - 13575209
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||||||  ||||||||||||||||||| |||||||||||    
T  13575127 atacttaaggggctggattgtattttattttgttatg-ggccaaaatcgcatcttcctgatacttagggggctaaaactgctat 13575209  T

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Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10532482 - 10532565
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||| ||||||||||||||||||||||| || |  ||||||||||| || ||||| |||| ||||||||||||||||||||    
T  10532482 atacttagggggctggattgtattttattttgttggagggccaaaatcgtaacttcctaatacatagggggccaaaactgctat 10532565  T

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Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1484459 - 1484381
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaact 79  Q
    ||||||| ||||||| ||| ||||||||||| ||||  |||||||||||||| |||| |||||||||||||||||||||    
T  1484459 atacttagggggctgaattatattttattttgttagagggccaaaatcgcaacttccagatacttagggggccaaaact 1484381  T

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Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 1484649 - 1484731
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||| ||||||||||| ||| ||||| || ||||||| ||| ||||| |||||||| ||||||||||||||||    
T  1484649 tacttagggggctgaattgtattttactttgttagggggtcaaaatcacaacttcctaatacttagagggccaaaactgctat 1484731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 37008289 - 37008223
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||| || ||||||||||||||||||||    
T  37008289 ttgtattttattttgttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctat 37008223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29816205 - 29816125
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||| ||||||| ||||||||||||||| ||||| ||||||||   ||| |||||||||||||||||| ||||| ||||||    
T  29816205 atacttatggggctgaattgtattttattttgttagggggccaaaa---caacttcctgatacttagggggtcaaaattgctat 29816125  T

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Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 10231102 - 10231180
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    |||||| ||| ||| ||||||||||||||| ||||  ||||||||||| || ||| | |||||||||||||||||||||    
T  10231102 tacttaggggactgaattgtattttattttgttagagggccaaaatcgaaacttcttaatacttagggggccaaaactg 10231180  T

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Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 39384325 - 39384244
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| |||||| |||||||||||||||| ||| | || |||| |||||| |||||||||||||||| ||||||| ||||||    
T  39384325 tacttagggggcttgattgtattttattttgttatg-ggtcaaactcgcaacttcctgatacttagggagccaaaattgctat 39384244  T

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Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 10532301 - 10532221
Alignment:
Q  3 acttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| |||| |||||| ||||||||||| || || || ||||||||||| ||||| |||||||||||| ||||||||||||    
T  10532301 acttagggggttggattatattttattttgttggg-ggtcaaaatcgcaacttcctaatacttagggggtcaaaactgctat 10532221  T

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Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 84246 - 84312
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagg 68  Q
    |||||| | ||||||||||||||||||||| ||||   |||||||| |||| |||||||||||||||    
T  84246 tacttatgaggctggattgtattttattttgttagagagccaaaattgcaacttcctgatacttagg 84312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 10230874 - 10230797
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    |||||| |||| ||||||| |||||||||| ||||| || | |||| |||| ||||| |||||||||||||||||||||    
T  10230874 tacttagggggttggattgaattttattttgttagg-ggtcgaaattgcaacttccttatacttagggggccaaaactg 10230797  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 51690426 - 51690476
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaa 52  Q
    |||||| ||||||| ||||||||||||||| ||| ||||||||||||||||    
T  51690426 tacttagggggctgaattgtattttattttgttacgaggccaaaatcgcaa 51690476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 13574905 - 13574860
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaat 47  Q
    |||||||||||||| ||||||||||||||| ||||| |||||||||    
T  13574905 tacttaaggggctgaattgtattttattttgttagggggccaaaat 13574860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40876970 - 40877050
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgc 81  Q
    ||||||||||||| |  ||||| |||||||  ||||| |||||||||||||| ||| ||  || |||||||||||||||||    
T  40876970 atacttaaggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttggaacatagggggccaaaactgc 40877050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 39411662 - 39411595
Alignment:
Q  11 ggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    ||||| ||||||||||||||| ||||| ||||||||||  |||||||| |||||||  ||||||||||||    
T  39411662 ggctgaattgtattttattttgttagg-ggccaaaatcctaatttcctaatactta-agggccaaaactg 39411595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39411878 - 39411946
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggg 70  Q
    ||||||| | || |||||||||||||||||| ||||| || ||||||||||| || || |||||||||||    
T  39411878 atacttaggaggttggattgtattttattttgttagg-ggtcaaaatcgcaactttcttatacttagggg 39411946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 14979052 - 14979108
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||||||||| |||| ||| ||| | ||||||||| |||||| ||||    
T  14979052 ttttcttaggaggccaaaattgcaacttcatgaaagttagggggcgaaaacttctat 14979108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 18632591 - 18632647
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||| |||||||||||||||| ||| | | | ||||||||| |||||||||||    
T  18632591 ttttcttaagaggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctat 18632647  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 51549373 - 51549441
Alignment:
Q  9 ggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 77  Q
    |||||||  |||||||||| ||  ||||| | |||||||||||| ||| ||| ||||||||||||||||    
T  51549373 ggggctgttttgtattttaattagttaggggtccaaaatcgcaacttcttgaaacttagggggccaaaa 51549441  T

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Target: scaffold0286 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 17726 - 17644
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||||||||||||||||||| |||||  | ||||||||||| ||||||||||| |||||||||||||||||||    
T  17726 tacttagggggctggattgtattttattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctat 17644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 17902 - 17983
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||| | ||||||||| ||| ||||| |||||||||||||| ||  |||||||||| ||  ||||||||||||    
T  17902 tacttagggggctgaactgtattttactttattagg-ggccaaaatcgcaactttatgatacttagaggatcaaaactgctat 17983  T

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Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 2164683 - 2164765
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||||||||||||||||||| |||||  | ||||||||||| ||||||||||| |||||||||||||||||||    
T  2164683 tacttagggggctggattgtattttattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctat 2164765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 2176316 - 2176398
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||||||||||||||||||| |||||  | ||||||||||| ||||||||||| |||||||||||||||||||    
T  2176316 tacttagggggctggattgtattttattttgttagggtgtcaaaatcgcaacttcctgatactcagggggccaaaactgctat 2176398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 1614895 - 1614835
Alignment:
Q  9 ggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttaggg 69  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||    
T  1614895 ggggctggattgtattttattttgttaggaggccacaatcgcaacttcctaatacttaggg 1614835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 12101683 - 12101747
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatactta 66  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| ||| || ||||||||||    
T  12101683 tacttagggggctggattgtattttattttgttaggaggccaaaatcacaactttctgatactta 12101747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 1615034 - 1615103
Alignment:
Q  12 gctggattgtattttattttcttaggagg-ccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    |||||||||||||||||||| ||||| || |||||||||||| || || ||||||||||||| |||||||    
T  1615034 gctggattgtattttattttgttaggggggccaaaatcgcaactttctaatacttagggggctaaaactg 1615103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 2164507 - 2164426
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||| | ||||||||| ||| ||||| |||||||||||||| ||  |||||||||| ||  ||||||||||||    
T  2164507 tacttagggggctgaactgtattttactttattagg-ggccaaaatcgcaactttatgatacttagaggatcaaaactgctat 2164426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 2176140 - 2176059
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||| | ||||||||| ||| ||||| |||||||||||||| ||  |||||||||| ||  ||||||||||||    
T  2176140 tacttagggggctgaactgtattttactttattagg-ggccaaaatcgcaactttatgatacttagaggatcaaaactgctat 2176059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 12798798 - 12798733
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||| ||||||| | |||||||||| ||| ||| |  ||||||||||||||||||||    
T  12798798 ttgtattttattttgttaggag-caaaaatcgcaacttcttgaaatatagggggccaaaactgctat 12798733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 238992 - 238936
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||| |||||||| ||||||||||| ||| ||| | ||||||||| |||||||||||    
T  238992 tttttttaggaggtcaaaatcgcaacttcgtgaaaattagggggcgaaaactgctat 238936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 3369935 - 3369857
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    |||||||||||||| ||||||||||||||| ||||| |||||||||||||| ||| ||||||||||||||| |||||||    
T  3369935 tacttaaggggctgaattgtattttattttgttagggggccaaaatcgcaacttcttgatacttagggggcaaaaactg 3369857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 30626656 - 30626590
Alignment:
Q  17 attgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30626656 attgtattttcttttgttaggaggccaaaatcgcaatttcctgatactta-ggggccaaaactgctat 30626590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 1096525 - 1096604
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgc 81  Q
    ||||||||||||||  ||||| |||||||| ||||| |||||||||||| |  || ||||||||||||||||||||||||    
T  1096525 tacttaaggggctgagttgtaatttattttgttagggggccaaaatcgccaaatcatgatacttagggggccaaaactgc 1096604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 19914975 - 19915046
Alignment:
Q  12 gctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgcta 83  Q
    |||||||||||||||||||| ||||||||  |||||| ||||||| ||||| ||||| | ||||||||||||    
T  19914975 gctggattgtattttattttattaggaggataaaatcacaatttcttgatatttaggagaccaaaactgcta 19915046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 12690061 - 12690143
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||| ||||||||||  | |||||||| ||||    
T  12690061 tacttagggggctgaattgtattttattttcttaagaggtgaaaatcgcaacttcatgatacttagatgaccaaaactactat 12690143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 54953810 - 54953732
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgct 82  Q
    |||||||||||||| ||| ||||||||||| ||| | || ||||||||||| ||||| |||||||||||| ||||||||||    
T  54953810 tacttaaggggctgaattatattttattttgttatg-ggtcaaaatcgcaacttcctaatacttaggggg-caaaactgct 54953732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 11787312 - 11787371
Alignment:
Q  4 cttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatac 63  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||| || || |||||||    
T  11787312 cttagggggctggattgtattttattttgttaggaagccaaaatcgtaacttgctgatac 11787371  T

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Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 11799479 - 11799538
Alignment:
Q  4 cttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatac 63  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||| || || |||||||    
T  11799479 cttagggggctggattgtattttattttgttaggaagccaaaatcgtaacttgctgatac 11799538  T

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Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 16323058 - 16322987
Alignment:
Q  9 ggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    ||||| ||||||||||||||||| ||| | || ||||||||||| ||| | ||||||| |||||||||||||    
T  16323058 ggggccggattgtattttattttgttatggggtcaaaatcgcaacttcttaatacttaaggggccaaaactg 16322987  T

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Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 326887 - 326969
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||||||  ||||| |||||||| |||||  ||||||||||| |  |  ||||||||||| |||||||||||||||    
T  326887 tacttaaggggctgagttgtaatttattttgttagggagccaaaatcgccaaattgtgatacttaggtggccaaaactgctat 326969  T

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Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 1095844 - 1095762
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||||||  ||||| |||||||| ||||  ||||||||||||    || ||||||||||||||||||||| |||||    
T  1095844 tacttaaggggctgagttgtaatttattttgttagagggccaaaatcgcctgatcgtgatacttagggggccaaaacagctat 1095762  T

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Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 25423848 - 25423783
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||| ||||||||| |||||||||| || |||| || ||||||||||||||| ||||    
T  25423848 ttgtattttattttgttaggaggcaaaaatcgcaactt-ctgaaacatagggggccaaaactactat 25423783  T

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Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 5303842 - 5303781
Alignment:
Q  19 tgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    |||| |||||||| ||| | || ||||||||||| |||||||||||||||||| ||||||||    
T  5303842 tgtaatttattttgttaaggggtcaaaatcgcaacttcctgatacttagggggacaaaactg 5303781  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 30627005 - 30627081
Alignment:
Q  8 aggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||| ||||||||||||||| ||| | || |||||||| || ||  ||||||||||||||  |||||||||||    
T  30627005 aggggctgaattgtattttattttgttatggggtcaaaatcgtaactttttgatacttagggggtgaaaactgctat 30627081  T

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Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 37831654 - 37831598
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||| |||||||||||||| ||| | | ||||||||||| |||||||||||    
T  37831654 ttttcttagggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctat 37831598  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 5547995 - 5548061
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| |||||||  |||||||||||||||||||| ||| | | || |||| |||||||||||||||    
T  5547995 ttgtagtttatttaattaggaggccaaaatcgcaacttcttaaaacataggaggccaaaactgctat 5548061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 11787142 - 11787069
Alignment:
Q  10 gggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| |||||||||||||||| | ||| ||| |||||||||| || |||||| ||||| || ||||||||||||    
T  11787142 gggctcgattgtattttattttgtcagggggc-aaaatcgcaactttctgatatttaggagggcaaaactgctat 11787069  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 11799309 - 11799236
Alignment:
Q  10 gggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| |||||||||||||||| | ||| ||| |||||||||| || |||||| ||||| || ||||||||||||    
T  11799309 gggctcgattgtattttattttgtcagggggc-aaaatcgcaactttctgatatttaggagggcaaaactgctat 11799236  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 47742303 - 47742237
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| |||||||  ||||| |||||||||||||| ||||||| || |||| || ||||||||||||    
T  47742303 ttgtagtttatttagttagggggccaaaatcgcaacttcctgaaacataggtggacaaaactgctat 47742237  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 48188317 - 48188359
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaa 44  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||    
T  48188317 tacttaaggggctgaattgtattttattttgttagggggccaa 48188359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 14449335 - 14449279
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||| |||||||||| ||| ||| ||| | ||||||||| |||||||||||    
T  14449335 ttttcttagggggccaaaatctcaacttcgtgaaagttagggggcgaaaactgctat 14449279  T

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Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 27756353 - 27756271
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| | ||||||||||||||||||||| ||||| |||||||||||||| | ||| ||||||| |||||||||||||||||    
T  27756353 tacttaggaggctggattgtattttattttgttagggggccaaaatcgcaactacctaatacttaaggggccaaaactgctat 27756271  T

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Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24679069 - 24679148
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    ||||||| |||||||  |||||||||||||| ||||| |||||||||||||||||| ||| || ||||||||||||||||    
T  24679069 atacttagggggctgttttgtattttattttgttagggggccaaaatcgcaatttcttgaaacatagggggccaaaactg 24679148  T

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Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 35793463 - 35793381
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||| ||||||||||||||| ||||| | | |||||||||| ||||| | | |||||||||||||||||||||    
T  35793463 tacttaaggggctgaattgtattttattttgttaggggcctaaaatcgcaacttcctaaaatttagggggccaaaactgctat 35793381  T

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Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 21939301 - 21939382
Alignment:
Q  3 acttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| |||| ||||||||| ||  |||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  21939301 acttagggggttggattgtaattgttttttttagggggccaaaatcgcaacttcgtgatacttagggggccaaaactgctat 21939382  T

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Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 24432424 - 24432342
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||||| ||||||||||||| |||||  ||||||||||||| ||| |||||||||| ||| ||||| ||||||    
T  24432424 tacttagggggctggactgtattttatttttttagggagccaaaatcgcaacttcttgatacttagtgggtcaaaattgctat 24432342  T

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Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 35828637 - 35828719
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||||||||||||||||||| ||||||||  ||||||  |||||| | ||||||| |||| ||||||| ||||    
T  35828637 tacttaaggggctggattgtattttattttattaggaggtaaaaatcataatttcataatacttatggggtcaaaactactat 35828719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 35828437 - 35828355
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||| |||||||||| |||| |||||||| ||||||||||| || |||||| ||| | || ||||||||||||    
T  35828437 tacttagggggctgaattgtattttgttttgttaggaggtcaaaatcgcaactttctgatatttaagaggtcaaaactgctat 35828355  T

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Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 24432626 - 24432702
Alignment:
Q  7 aaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||| |||||||||||||||| ||||   |||||||||||||  |||| ||||||| |||||||||||||||||    
T  24432626 aaggggctagattgtattttattttgttagtgagccaaaatcgcaa-ctcctaatacttaaggggccaaaactgctat 24432702  T

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Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 15327789 - 15327714
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaac 78  Q
    |||||| | ||||| ||||||||||||||| ||||| ||||||||| |||| ||||| ||||||||| |||||||||    
T  15327789 tacttaggaggctgaattgtattttattttgttagg-ggccaaaattgcaaattccttatacttaggaggccaaaac 15327714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43078028 - 43078111
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||||  ||||| |||||||  ||||| |||||||||||||| ||| ||| ||  ||||||||||| |||||||    
T  43078028 atacttaaggggctgttttgtagtttatttaattagggggccaaaatcgcaacttcttgaaacagagggggccaaatctgctat 43078111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 9500149 - 9500210
Alignment:
Q  23 ttttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||| |||||||||| | |||||||||||| ||| ||| ||||||||||| |||||||||||    
T  9500149 tttttttttcttaggggaccaaaatcgcaacttcttgaaacttagggggctaaaactgctat 9500210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10691387 - 10691311
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 77  Q
    ||||||||||||| |  ||||| |||||||  ||||| |||||||||||||| ||| ||| || |||||||||||||    
T  10691387 atacttaaggggcagttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaa 10691311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 44565344 - 44565276
Alignment:
Q  9 ggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 77  Q
    ||||||| ||| | ||||||||| ||||||||||||||| |||| ||| | |||||||||||| |||||    
T  44565344 ggggctgaattattttttattttgttaggaggccaaaattgcaacttcataatacttagggggtcaaaa 44565276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 28960719 - 28960654
Alignment:
Q  17 attgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||||||| ||||| | |||||||| ||| ||| ||||||||| |||||||||||||||||    
T  28960719 attgtattttattttgttagg-gaccaaaatcacaacttcttgatactta-ggggccaaaactgctat 28960654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 30283707 - 30283766
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 77  Q
    |||||||||||||| ||||| || ||||||||||| ||  |||||| |||||||||||||    
T  30283707 ttgtattttattttattagggggtcaaaatcgcaactttttgatacatagggggccaaaa 30283766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 28350188 - 28350122
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| ||| |||||||||| ||||||||||| || ||| ||| | ||||||||| |||||||||||    
T  28350188 ttgtagttttttttcttagggggccaaaatcgtaacttcgtgaaagttagggggctaaaactgctat 28350122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 35793694 - 35793772
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    |||||| |||||| |||||||||||||||| ||| | || |||||||| || |||||  || ||| |||||||||||||    
T  35793694 tacttagggggctagattgtattttattttgttaaggggtcaaaatcgtaacttcctagtatttatggggccaaaactg 35793772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43657820 - 43657877
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcct 58  Q
    |||||||| | |||| ||||||||||||||| |||||  ||||||||||||| |||||    
T  43657820 atacttaaagagctgaattgtattttattttgttagggtgccaaaatcgcaacttcct 43657877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 15327970 - 15328049
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgct 82  Q
    |||||| ||||||| ||||||||||||||| ||||| ||  |||||| ||| | ||| ||||||||||| | |||||||||    
T  15327970 tacttagggggctgtattgtattttattttgttagg-ggttaaaatcacaactccctaatacttaggggactaaaactgct 15328049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31227113 - 31227196
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||| |||||| ||||||||||||||| ||||  || ||||||||||| ||||||||| ||||| |||||||||||||||    
T  31227113 atacttaaagggctgtattgtattttattttgttagagggtcaaaatcgcaacttcctgatatttaggaggccaaaactgctat 31227196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 23993894 - 23993967
Alignment:
Q  11 ggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||||||||||||| ||||| ||||||||| |||| ||| | |||||||||| ||||||||||||||    
T  23993894 ggctggattgtattttattttgttagggggccaaaattgcaacttcttaatacttagggagccaaaactgctat 23993967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 14289353 - 14289287
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagg 68  Q
    |||||||||||||  ||||||||||||||| ||||| |||||||||||||| ||| |||||||||||    
T  14289353 tacttaaggggctaaattgtattttattttgttagggggccaaaatcgcaacttcatgatacttagg 14289287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 3403599 - 3403517
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| |||||  |||||||||||||||| |||||||| |||||| |||| |||||||||||| || |  ||||||||||||    
T  3403599 tacttagggggcatgattgtattttattttgttaggaggtcaaaattgcaaattcctgatactttggagatcaaaactgctat 3403517  T

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Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 31226939 - 31226857
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| |||| | |||||||||||||||| |||   |||||| ||| ||| || ||||||||||||||||||||||||||||    
T  31226939 tacttagggggtttgattgtattttattttgttacagggccaagatctcaactttctgatacttagggggccaaaactgctat 31226857  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14816022 - 14816105
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||| ||||| |  ||||| |||||||  ||||| |||||||||||||| ||| ||| || ||||||||||||||||||||    
T  14816022 atacttagggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctat 14816105  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 20650435 - 20650376
Alignment:
Q  25 ttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||||| |||||||||| ||| ||| ||| ||||||||||| |||||||||||    
T  20650435 ttattttcttagggggccaaaatctcaacttcttgaaacttagggggctaaaactgctat 20650376  T

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Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 23993811 - 23993729
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||  |||||||||| ||||||||||| || |||| |||||||||||| || ||||||||||||||   |||||||||||    
T  23993811 atacttatagggctggattatattttattttgtt-ggagaccaaaatcgcaactttctgatacttaggggataaaaactgctat 23993729  T

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Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 35500316 - 35500399
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||||| |  |||||||||||||| ||||| |||||||||||||| ||| ||| || |||||  |||||||| ||||    
T  35500316 atacttaaggggcggttttgtattttattttgttagggggccaaaatcgcaacttcttgaaacatagggccccaaaactactat 35500399  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 37431765 - 37431845
Alignment:
Q  3 acttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||| |  ||||| ||| ||||||||||||||||||||||||| ||| ||  | ||||||||| |||||||||||    
T  37431765 acttaaggggcggttttgtagttt-ttttcttaggaggccaaaatcgcaacttcgtggaagttagggggcgaaaactgctat 37431845  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 35125155 - 35125226
Alignment:
Q  8 aggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    |||||||| |||||||||| |||| ||||| || ||||||||| | ||||| ||||||| |||||||||||||    
T  35125155 aggggctgaattgtattttcttttgttagggggtcaaaatcgctacttcctaatactta-ggggccaaaactg 35125226  T

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Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 17850476 - 17850542
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| |||||||  |||||||||||||||||||| ||| | | || ||||||||||||||| ||||    
T  17850476 ttgtagtttatttagttaggaggccaaaatcgcaacttcttaaaacatagggggccaaaactactat 17850542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13491780 - 13491829
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgc 50  Q
    ||||||| |||| |||||||||||||||||| ||| | ||||||||||||    
T  13491780 atacttagggggatggattgtattttattttgttaaggggccaaaatcgc 13491829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 10522725 - 10522649
Alignment:
Q  8 aggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||| ||||||||||||||| ||||  | |||||||| ||| ||| ||||||||| ||  | |||||||||||    
T  10522725 aggggctgcattgtattttattttattagtggaccaaaatcacaacttcttgatacttaaggaccaaaaactgctat 10522649  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 14489463 - 14489518
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||| |||||||||||||| ||| ||| | ||||||||| |||||||||||    
T  14489463 ttttcttagg-ggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctat 14489518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 15023090 - 15023146
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||| || ||||||| ||| ||| ||| | |||||||||||||||||||||    
T  15023090 ttttcttagggggtcaaaatcacaacttcttgaaagttagggggccaaaactgctat 15023146  T

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Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 38498207 - 38498125
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||| ||||||||||||||| ||||| ||| ||||| |||| ||||||||||||||| || ||||||||||||    
T  38498207 tacttagggggctgaattgtattttatttttttagggggcgaaaattgcaacttcctgatacttaggtggtcaaaactgctat 38498125  T

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Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 20364748 - 20364688
Alignment:
Q  24 tttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||| ||||| || ||||||||||| |||||||||||||||||| ||||||||||||    
T  20364748 tttattttgttagggggtcaaaatcgcaacttcctgatacttagggggacaaaactgctat 20364688  T

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Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 37426694 - 37426761
Alignment:
Q  16 gattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||||| ||||| ||| ||||| |||| || ||||||||||||||||||||||||||||    
T  37426694 gattgtattttattttgttagg-ggctaaaattgcaactttctgatacttagggggccaaaactgctat 37426761  T

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Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 20987034 - 20986952
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| ||||||| ||||||||| ||||| |||||||  ||||||| ||| || ||||||||||| ||| ||||||||||||    
T  20987034 tacttagggggctgaattgtatttaattttgttaggagatcaaaatcacaactttctgatacttagagggtcaaaactgctat 20986952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 12166883 - 12166811
Alignment:
Q  12 gctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||||||||| ||||| ||| ||||| |||||||| ||||| |||||| | |||| |||||||    
T  12166883 gctggattgtattttattttgttagggggctaaaattgcaatttcatgatatttagggtgtcaaacctgctat 12166811  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6464300 - 6464383
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||| ||||| |  ||||| |||||||  ||||| |||||||||||||| ||| ||| || ||||||||||||||||||||    
T  6464300 atacttagggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaactgctat 6464383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11167962 - 11167879
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||  ||||||| ||||| |||||||||||||| |||||||||| ||| ||  ||||||||| |||| ||||||| ||||    
T  11167962 atacttagagggctgggttgtaatttattttcttagggggccaaaatcacaagtttgtgatacttaaggggtcaaaactactat 11167879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 38944178 - 38944241
Alignment:
Q  21 tattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||| ||| ||||||| ||| |||| ||||| ||||||| |||||||||||||||||    
T  38944178 tattttattttgttaagaggccataattgcaacttcctaatacttaaggggccaaaactgctat 38944241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 36501474 - 36501424
Alignment:
Q  16 gattgtattttattttcttaggaggccaaaatcgcaatttcctgatactta 66  Q
    |||||||||||||||| ||||| | |||||||||||| |||||||||||||    
T  36501474 gattgtattttattttgttaggggaccaaaatcgcaacttcctgatactta 36501424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 22408783 - 22408852
Alignment:
Q  13 ctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgct 82  Q
    ||||||||||||||||||| ||||| || ||||||||||| ||||||| |   ||||| |||||||||||    
T  22408783 ctggattgtattttattttgttagggggtcaaaatcgcaacttcctgacaggcaggggaccaaaactgct 22408852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36628651 - 36628716
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatactta 66  Q
    |||||||||||||| |||| ||||||||||| ||||| | ||||||| |||| ||||| |||||||    
T  36628651 atacttaaggggctagattatattttattttattaggggaccaaaattgcaacttcctaatactta 36628716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 38498261 - 38498306
Alignment:
Q  32 cttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 77  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||    
T  38498261 cttagggggccaaaatcgcaacttcctgatatttagggggccaaaa 38498306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 33087647 - 33087586
Alignment:
Q  23 ttttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||| |||| ||| ||||||||||| ||| ||||| |||| ||| ||||||||||||    
T  33087647 ttttattttgttagaaggtcaaaatcgcaacttcatgatatttagagggtcaaaactgctat 33087586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 37426500 - 37426423
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaact 79  Q
    ||||||||| |||| ||||||||||||||| ||| |||| |||| |||||| || || ||||||| | ||| ||||||    
T  37426500 tacttaaggagctgaattgtattttattttgttaagaggtcaaagtcgcaactttctaatacttatgaggcaaaaact 37426423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 3999148 - 3999092
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||| || ||||||||||| ||| ||| | ||||||||| |||||||||||    
T  3999148 ttttcttagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaactgctat 3999092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 37872 - 37792
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgct 82  Q
    ||||||| ||||||  ||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||| |||||||||    
T  37872 atacttagggggctaaattgtattttattttgttagg-ggtcaaaatcgcaacttcctgatacttagggggctaaaactgct 37792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 162268 - 162351
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||| |||||| ||||||||||||||| ||||| |||||||||| ||  ||||  ||||||| |||||||||||||||||    
T  162268 atacttaaagggctgtattgtattttattttgttagggggccaaaatcacatcttcccaatacttaaggggccaaaactgctat 162351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 161734 - 161803
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggg 70  Q
    |||||||| || ||||||||||||||||||| ||||  |||||||||| ||  || ||||||||||||||    
T  161734 atacttaaaggactggattgtattttattttgttagagggccaaaatctcatcttactgatacttagggg 161803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 5899298 - 5899219
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttag-ggggccaaaactg 80  Q
    |||||| |||| |||||||||||||||||| |||||  ||| ||||||||| |||||||||||||| |||||||||||||    
T  5899298 tacttaggggggtggattgtattttattttgttagggagccgaaatcgcaacttcctgatacttaggggggccaaaactg 5899219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 9498982 - 9498919
Alignment:
Q  17 attgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    ||||||||||||||| ||| | || ||||||||||| |||||||||||||||||||||||||||    
T  9498982 attgtattttattttgttatggggtcaaaatcgcaacttcctgatacttagggggccaaaactg 9498919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18929391 - 18929308
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||| ||| ||  ||||| ||| | |||||| ||||||||    
T  18929391 atacttaaggggctggattgtattttattttgttaggaggtcaaaatctcaactttttgataattaagaggccaatactgctat 18929308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 2044761 - 2044681
Alignment:
Q  3 acttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| |||| || ||||||||||||||| ||| | |||| ||||||||||||| ||||||||| |||||||||||||||||    
T  2044761 acttagggggttgaattgtattttattttgttatggggccgaaatcgcaatttcatgatactta-ggggccaaaactgctat 2044681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 4694986 - 4695061
Alignment:
Q  8 aggggctggattgtattttattttctta-ggaggccaaaatcgcaatttcctgatacttagggggccaaaactgct 82  Q
    |||||||| ||||||||||||||| ||| || |||||||||| ||| ||  |||||||||||||||||||||||||    
T  4694986 aggggctgaattgtattttattttgttaagggggccaaaatcacaactttttgatacttagggggccaaaactgct 4695061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 29219164 - 29219086
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    |||||| |||| |||||||||||||||||| ||||| | | |||||| ||| ||||| ||||||||||| |||||||||    
T  29219164 tacttagggggttggattgtattttattttattaggggactaaaatcacaacttcctaatacttaggggaccaaaactg 29219086  T

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Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 29219349 - 29219431
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| || |||||||||||| ||||||| ||||| ||| |||||||||| ||||| |||||||||||| || || ||||||    
T  29219349 tacttagggagctggattgtatattattttgttagggggctaaaatcgcaacttcctaatacttagggggtcagaattgctat 29219431  T

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Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 41602838 - 41602919
Alignment:
Q  3 acttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||| |  ||||| ||| |||||||||||||| |||||||||| ||  ||| ||||||||||| |||||||||||    
T  41602838 acttaaggggcggttttgtagttttttttcttaggaggctaaaatcgcaactttttgaaacttagggggctaaaactgctat 41602919  T

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Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5899504 - 5899583
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactg 80  Q
    ||||||| ||||||| ||||||||||||||| ||| ||| ||||||| |||| ||  ||||||||||  |||||||||||    
T  5899504 atacttagggggctgaattgtattttattttgttatgagaccaaaattgcaactttgtgatacttagatggccaaaactg 5899583  T

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Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 34232837 - 34232764
Alignment:
Q  9 ggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||| ||||||||||||||| ||||| ||||||||| ||||  |||| ||||||| |||||||||||||||||    
T  34232837 ggggctgaattgtattttattttattagggggccaaaattgcaa-ctcctaatactta-ggggccaaaactgctat 34232764  T

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Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 9499192 - 9499265
Alignment:
Q  10 gggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||||||||||  |||  ||  ||||||||||| ||| | |||||||||||||||||||||||||    
T  9499192 gggctggattgtattttatttctttat-agatcaaaatcgcaacttcgtaatacttagggggccaaaactgctat 9499265  T

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Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 29919146 - 29919081
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||| |||||||| ||||| ||||||||||||||  || |||||||||||||| ||||||||||||    
T  29919146 ttgtaatttattttgttagg-ggccaaaatcgcaagatcgtgatacttagggggtcaaaactgctat 29919081  T

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Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 18092973 - 18092917
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||| |||||||||||||||| ||| ||  ||||||||||| |||||||||||    
T  18092973 ttttcttacgaggccaaaatcgcaacttcttgtaacttagggggctaaaactgctat 18092917  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 27545607 - 27545663
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||| |||||||||||||| ||| ||||| ||||||||| ||||| |||||    
T  27545607 ttttcttagggggccaaaatcgcaacttcgtgatagttagggggcaaaaaccgctat 27545663  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 18896616 - 18896671
Alignment:
Q  26 tattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgc 81  Q
    |||||||||||  ||||||||||||||  |  ||||||||||||||||||||||||    
T  18896616 tattttcttagtgggccaaaatcgcaagattgtgatacttagggggccaaaactgc 18896671  T

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Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 29340840 - 29340774
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||||||| ||| | |||||||||||||| ||  | | || ||||||||||||||||||||    
T  29340840 ttgtattttattttgttaaggggccaaaatcgcaaattatttaaacatagggggccaaaactgctat 29340774  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45522416 - 45522497
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgct 82  Q
    ||||||| ||||| |  |||||||||||||| ||||| ||| |||||||||| ||| | | || ||||||| ||||||||||    
T  45522416 atacttagggggcggttttgtattttattttgttagggggctaaaatcgcaacttcttaaaacatagggggtcaaaactgct 45522497  T

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Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 5180752 - 5180704
Alignment:
Q  33 ttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgc 81  Q
    |||||||| ||||||||||| ||| ||||| |||||||| |||||||||    
T  5180752 ttaggaggtcaaaatcgcaagttcatgatagttagggggtcaaaactgc 5180704  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 22192364 - 22192308
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||| |||||||||||||| ||| ||| | ||| ||||| |||||||||||    
T  22192364 ttttcttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctat 22192308  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 33298585 - 33298641
Alignment:
Q  28 ttttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||||| |||||||||||||| ||| ||| | ||||| ||| |||||||||||    
T  33298585 ttttcttagggggccaaaatcgcaacttcgtgaaagttaggaggcgaaaactgctat 33298641  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45163685 - 45163761
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaa 77  Q
    ||||||| ||||| |  ||||| |||||||  ||||| |||||||||||||| ||| ||| || |||||||||||||    
T  45163685 atacttagggggcggttttgtagtttatttagttagggggccaaaatcgcaacttcttgaaacatagggggccaaaa 45163761  T

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Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 128141 - 128223
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||| |||||||||||||||||||||||  || | | ||||||| |||| || ||||||||||| ||||||||||||||||    
T  128141 tacttagggggctggattgtattttattttggtaagggcccaaaattgcaactttctgatacttagagggccaaaactgctat 128223  T

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Target: scaffold1088 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 2096 - 2146
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaa 52  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  2096 tacttaaggggctgaattgtattttattttgttagggggccaaaatcgcaa 2146  T

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Target: scaffold0172 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9862 - 9944
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    |||||||  ||||| |||||||||||||||| ||||| || ||||||||||| ||||| ||| | |||||| ||||||||||||    
T  9862 atacttagagggctagattgtattttattttattagg-ggtcaaaatcgcaacttcctaatattaagggggtcaaaactgctat 9944  T

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Target: scaffold0172; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9634 - 9583
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaa 52  Q
    ||||||||||||||| ||||||||||||||| || |  ||||||||||||||    
T  9634 atacttaaggggctgaattgtattttattttatttgtgggccaaaatcgcaa 9583  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 151591 - 151669
Alignment:
Q  2 tacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgc 81  Q
    |||||| ||||||| |||||||||||| || ||||| ||| |||||| ||| ||||||||||||||| || |||||||||    
T  151591 tacttagggggctgaattgtattttatattgttagggggctaaaatcacaa-ttcctgatacttaggaggacaaaactgc 151669  T

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Target: scaffold0468 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 10440 - 10357
Alignment:
Q  1 atacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctat 84  Q
    ||||||||||||| |  ||||| |||||||  ||||| ||||||||| |||||||| | | || |||| |||||||||||||||    
T  10440 atacttaaggggcggttttgtagtttatttagttagggggccaaaattgcaatttcttaaaacataggaggccaaaactgctat 10357  T

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Target: scaffold0062 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 46148 - 46079
Alignment:
Q  18 ttgtattttattttcttaggaggccaaaatcgcaatttcctgatacttagggggccaaaactgctataaa 87  Q
    ||||| ||| |||||||||| ||  |||||||||| ||| ||| | ||||||||| ||||||||||||||    
T  46148 ttgtagtttcttttcttagggggttaaaatcgcaacttcgtgaaagttagggggcgaaaactgctataaa 46079  T

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