View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8251_high_21 (Length: 393)
Name: NF8251_high_21
Description: NF8251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8251_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 38733619 - 38733495
Alignment:
| Q |
101 |
gatcaaaacatgaatctagtaaaacaaagcacaaagcagaagttaaaaaacaatgcaaatgaaagagtgagagtaagagagattactcaggtttttcttc |
200 |
Q |
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| T |
38733619 |
gatcaaaacatgaatctagtaaaacaaagcacaaagcagaagttaaaaaacaatgcgtatgaaagagtgagagtaagagagattactcaggtttttcttc |
38733520 |
T |
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| Q |
201 |
agagtcagaggattcatcggaatct |
225 |
Q |
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|||||||||||||||||| |||||| |
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| T |
38733519 |
agagtcagaggattcatcagaatct |
38733495 |
T |
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