View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8251_high_22 (Length: 391)
Name: NF8251_high_22
Description: NF8251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8251_high_22 |
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Alignment Details
Target: chr8 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 1 - 390
Target Start/End: Complemental strand, 32484714 - 32484325
Alignment:
| Q |
1 |
atccccataaaataatgcatcaatgaataaaaagaagacacacactacactaattatattaagctacattaaataatagagccatagaagtccattatag |
100 |
Q |
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| T |
32484714 |
atccccataaaataatgcatcaatgaataaaaagaagacacacactacactaattatattaagctacatttaataatagagccatagaagtccattatag |
32484615 |
T |
|
| Q |
101 |
agtacacatagaaagaaacaatagctttggctagctagtttttcaaggagaagaagaataaatatagtatttttggacaaagcattgataattttgcaca |
200 |
Q |
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| T |
32484614 |
agtacacatagaaagaaacaatagctttggctagctagtttttcaaggagaagaagaataaatatagtatttttggacaaagcattgataattttgcaca |
32484515 |
T |
|
| Q |
201 |
aaaatcaaacatccttgatataataatctcattttgttctactacttcaatatgtgtgtcaaatttacctctactacttggccacaacaacaatgtcatg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32484514 |
aaaatcaaacatccttgatataataatctcattttgttctactacttcaatatgtgtgtcaaatttacctctactacttggccacaacaacaatgtcatg |
32484415 |
T |
|
| Q |
301 |
gtcaaatgattgaaacacaaattttggtaaaagagaagtatatatgtgggataatatatacgccatgatccccataataactcctctttc |
390 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32484414 |
gtcaaatgattgaaacacaaattttggtaaaagagaagtatatatgtgggataatatatacgccatgatccccataataactcctctttc |
32484325 |
T |
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