View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8251_high_45 (Length: 258)
Name: NF8251_high_45
Description: NF8251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8251_high_45 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 49946287 - 49946526
Alignment:
| Q |
1 |
tactagctttattaggtttgtattatgcatcagtttttgcacttttaagcacctggaaaccctaatatctgtccccacattcatgcatgcccgtggcttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49946287 |
tactagctttattaggtttgtattatgcatcagtttttgcacttttaagcacctggaaaccctaatatctgtccccacattcatgcatgcccgtggcttg |
49946386 |
T |
|
| Q |
101 |
cccaaaaatggattaagtctataattcaagcctatgtttcttagccgcctgaaatatgtctcagtaactttgggttctatctaatcacttcagctagcta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49946387 |
cccaaaaatggattaagtctataattcaagcctatgtttcttagccgcctgaaatatgtctcagtaactttgggttctatctaatcacttcagctagcta |
49946486 |
T |
|
| Q |
201 |
gagctacctaagtataggtacgtataagtaatgactttaa |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
49946487 |
gagctacctaagtataggtacgtataagtaatgactttaa |
49946526 |
T |
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